Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700650 | GAU32173.1 | 77.273 | 264 | 47 | 4 | 64 | 325 | 145 | 397 | 1.59e-112 | 344 |
| Msa0700650 | GAU32173.1 | 88.372 | 43 | 5 | 0 | 1 | 43 | 1 | 43 | 1.26e-13 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700650 | A0A2Z6MRA9 | 77.273 | 264 | 47 | 4 | 64 | 325 | 145 | 397 | 7.61e-113 | 344 |
| Msa0700650 | A0A2Z6MRA9 | 88.372 | 43 | 5 | 0 | 1 | 43 | 1 | 43 | 6.00e-14 | 83.6 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004880 | Msa0700650 | 0.807582 | 4.711340e-50 | -8.615850e-47 |
| Msa0008410 | Msa0700650 | 0.826032 | 3.388987e-54 | -8.615850e-47 |
| Msa0043980 | Msa0700650 | 0.804269 | 2.342232e-49 | -8.615850e-47 |
| Msa0045490 | Msa0700650 | 0.816762 | 4.678788e-52 | -8.615850e-47 |
| Msa0048000 | Msa0700650 | 0.810932 | 9.015529e-51 | -8.615850e-47 |
| Msa0050760 | Msa0700650 | 0.801362 | 9.334047e-49 | -8.615850e-47 |
| Msa0064350 | Msa0700650 | 0.800452 | 1.432039e-48 | -8.615850e-47 |
| Msa0068680 | Msa0700650 | 0.819353 | 1.214649e-52 | -8.615850e-47 |
| Msa0078650 | Msa0700650 | 0.804508 | 2.088740e-49 | -8.615850e-47 |
| Msa0089360 | Msa0700650 | 0.810748 | 9.877059e-51 | -8.615850e-47 |
| Msa0090360 | Msa0700650 | 0.802289 | 6.021492e-49 | -8.615850e-47 |
| Msa0095560 | Msa0700650 | 0.806590 | 7.639390e-50 | -8.615850e-47 |
| Msa0104800 | Msa0700650 | 0.804141 | 2.490361e-49 | -8.615850e-47 |
| Msa0120040 | Msa0700650 | -0.828814 | 7.293572e-55 | -8.615850e-47 |
| Msa0613090 | Msa0700650 | 0.800299 | 1.538431e-48 | -8.615850e-47 |
| Msa0617660 | Msa0700650 | 0.814912 | 1.209570e-51 | -8.615850e-47 |
| Msa0639310 | Msa0700650 | 0.804667 | 1.935007e-49 | -8.615850e-47 |
| Msa0641190 | Msa0700650 | 0.816449 | 5.497308e-52 | -8.615850e-47 |
| Msa0656960 | Msa0700650 | 0.816466 | 5.451373e-52 | -8.615850e-47 |
| Msa0693380 | Msa0700650 | 0.806932 | 6.468104e-50 | -8.615850e-47 |
| Msa0700650 | Msa0709160 | 0.817249 | 3.636724e-52 | -8.615850e-47 |
| Msa0700650 | Msa0710270 | 0.803731 | 3.030876e-49 | -8.615850e-47 |
| Msa0700650 | Msa0721280 | 0.806469 | 8.102809e-50 | -8.615850e-47 |
| Msa0700650 | Msa0726080 | 0.800382 | 1.479466e-48 | -8.615850e-47 |
| Msa0700650 | Msa0740510 | 0.804310 | 2.297264e-49 | -8.615850e-47 |
| Msa0700650 | Msa0748430 | 0.815515 | 8.885551e-52 | -8.615850e-47 |
| Msa0700650 | Msa0756540 | 0.813158 | 2.949318e-51 | -8.615850e-47 |
| Msa0700650 | Msa0765380 | 0.813777 | 2.155311e-51 | -8.615850e-47 |
| Msa0700650 | Msa0767220 | 0.801048 | 1.081847e-48 | -8.615850e-47 |
| Msa0700650 | Msa0796440 | 0.801880 | 7.309013e-49 | -8.615850e-47 |
| Msa0700650 | Msa0820770 | 0.806433 | 8.245776e-50 | -8.615850e-47 |
| Msa0700650 | Msa0828920 | 0.805442 | 1.332240e-49 | -8.615850e-47 |
| Msa0700650 | Msa0846230 | 0.801651 | 8.143017e-49 | -8.615850e-47 |
| Msa0700650 | Msa0861090 | 0.802766 | 4.801798e-49 | -8.615850e-47 |
| Msa0700650 | Msa0869100 | 0.827800 | 1.280562e-54 | -8.615850e-47 |
| Msa0700650 | Msa0882510 | 0.808617 | 2.836823e-50 | -8.615850e-47 |
| Msa0700650 | Msa0908170 | 0.806017 | 1.008976e-49 | -8.615850e-47 |
| Msa0700650 | Msa0919470 | 0.817043 | 4.046181e-52 | -8.615850e-47 |
| Msa0700650 | Msa0933230 | 0.846315 | 2.346840e-59 | -8.615850e-47 |
| Msa0700650 | Msa0933310 | 0.852988 | 3.216550e-61 | -8.615850e-47 |
| Msa0700650 | Msa0957870 | 0.814477 | 1.509953e-51 | -8.615850e-47 |
| Msa0700650 | Msa0957970 | 0.809469 | 1.863491e-50 | -8.615850e-47 |
| Msa0700650 | Msa0967370 | 0.809553 | 1.787728e-50 | -8.615850e-47 |
| Msa0700650 | Msa0969520 | 0.822597 | 2.175046e-53 | -8.615850e-47 |
| Msa0700650 | Msa0971090 | 0.855758 | 5.087842e-62 | -8.615850e-47 |
| Msa0700650 | Msa0980880 | 0.814288 | 1.662733e-51 | -8.615850e-47 |
| Msa0700650 | Msa0982240 | 0.816823 | 4.534534e-52 | -8.615850e-47 |
| Msa0700650 | Msa0990580 | 0.803424 | 3.509081e-49 | -8.615850e-47 |
| Msa0700650 | Msa0999100 | 0.824483 | 7.875834e-54 | -8.615850e-47 |
| Msa0700650 | Msa1031770 | 0.821526 | 3.852203e-53 | -8.615850e-47 |
| Msa0700650 | Msa1043390 | 0.815990 | 6.965250e-52 | -8.615850e-47 |
| Msa0700650 | Msa1043450 | 0.814670 | 1.368882e-51 | -8.615850e-47 |
| Msa0700650 | Msa1045180 | 0.808454 | 3.072889e-50 | -8.615850e-47 |
| Msa0700650 | Msa1080160 | 0.815739 | 7.920385e-52 | -8.615850e-47 |
| Msa0700650 | Msa1082500 | 0.805197 | 1.499354e-49 | -8.615850e-47 |
| Msa0700650 | Msa1085200 | 0.806570 | 7.714787e-50 | -8.615850e-47 |
| Msa0700650 | Msa1100720 | 0.805392 | 1.364665e-49 | -8.615850e-47 |
| Msa0700650 | Msa1110190 | 0.802123 | 6.513232e-49 | -8.615850e-47 |
| Msa0700650 | Msa1111180 | 0.814980 | 1.168687e-51 | -8.615850e-47 |
| Msa0700650 | Msa1112390 | 0.808779 | 2.618656e-50 | -8.615850e-47 |
| Msa0700650 | Msa1128330 | 0.818946 | 1.503213e-52 | -8.615850e-47 |
| Msa0700650 | Msa1130530 | 0.812207 | 4.762517e-51 | -8.615850e-47 |
| Msa0700650 | Msa1151720 | 0.809533 | 1.805120e-50 | -8.615850e-47 |
| Msa0700650 | Msa1170800 | 0.812088 | 5.055140e-51 | -8.615850e-47 |
| Msa0700650 | Msa1174850 | 0.802835 | 4.645793e-49 | -8.615850e-47 |
| Msa0700650 | Msa1197060 | 0.804205 | 2.415692e-49 | -8.615850e-47 |
| Msa0700650 | Msa1201560 | 0.805129 | 1.549766e-49 | -8.615850e-47 |
| Msa0700650 | Msa1211520 | 0.805047 | 1.611532e-49 | -8.615850e-47 |
| Msa0700650 | Msa1212950 | 0.800412 | 1.458583e-48 | -8.615850e-47 |
| Msa0700650 | Msa1214880 | 0.826786 | 2.240880e-54 | -8.615850e-47 |
| Msa0700650 | Msa1214890 | 0.821758 | 3.405112e-53 | -8.615850e-47 |
| Msa0700650 | Msa1230040 | 0.800004 | 1.765766e-48 | -8.615850e-47 |
| Msa0700650 | Msa1247250 | 0.804636 | 1.964056e-49 | -8.615850e-47 |
| Msa0700650 | Msa1250530 | 0.805987 | 1.023607e-49 | -8.615850e-47 |
| Msa0700650 | Msa1254510 | 0.801174 | 1.019852e-48 | -8.615850e-47 |
| Msa0700650 | Msa1255330 | 0.811334 | 7.375233e-51 | -8.615850e-47 |
| Msa0700650 | Msa1294480 | 0.814662 | 1.374559e-51 | -8.615850e-47 |
| Msa0700650 | Msa1295910 | 0.824686 | 7.056045e-54 | -8.615850e-47 |
| Msa0700650 | Msa1306840 | 0.801041 | 1.085654e-48 | -8.615850e-47 |
| Msa0700650 | Msa1306850 | 0.805416 | 1.348955e-49 | -8.615850e-47 |
| Msa0700650 | Msa1314340 | 0.805915 | 1.060109e-49 | -8.615850e-47 |
| Msa0700650 | Msa1328710 | 0.806300 | 8.794072e-50 | -8.615850e-47 |
| Msa0700650 | Msa1331910 | 0.820136 | 8.045495e-53 | -8.615850e-47 |
| Msa0700650 | Msa1331920 | 0.833953 | 3.964704e-56 | -8.615850e-47 |
| Msa0700650 | Msa1340650 | 0.816362 | 5.752121e-52 | -8.615850e-47 |
| Msa0700650 | Msa1341490 | 0.803065 | 4.164400e-49 | -8.615850e-47 |
| Msa0700650 | Msa1351550 | 0.835640 | 1.492110e-56 | -8.615850e-47 |
| Msa0700650 | Msa1357890 | 0.805009 | 1.641855e-49 | -8.615850e-47 |
| Msa0700650 | Msa1359040 | 0.806483 | 8.048463e-50 | -8.615850e-47 |
| Msa0700650 | Msa1371240 | 0.823417 | 1.400669e-53 | -8.615850e-47 |
| Msa0700650 | Msa1371640 | 0.839282 | 1.739679e-57 | -8.615850e-47 |
| Msa0700650 | Msa1376200 | 0.822334 | 2.504181e-53 | -8.615850e-47 |
| Msa0700650 | Msa1392260 | 0.800975 | 1.119781e-48 | -8.615850e-47 |
| Msa0700650 | Msa1397120 | 0.803739 | 3.019059e-49 | -8.615850e-47 |
| Msa0700650 | Msa1398090 | 0.804615 | 1.983747e-49 | -8.615850e-47 |
| Msa0700650 | Msa1403890 | 0.802703 | 4.947675e-49 | -8.615850e-47 |
| Msa0700650 | Msa1404540 | 0.804674 | 1.928557e-49 | -8.615850e-47 |
| Msa0700650 | Msa1422580 | 0.811675 | 6.218379e-51 | -8.615850e-47 |
| Msa0700650 | Msa1424450 | 0.804214 | 2.405555e-49 | -8.615850e-47 |
| Msa0700650 | Msa1426570 | 0.821831 | 3.275870e-53 | -8.615850e-47 |
| Msa0700650 | Msa1431060 | 0.803345 | 3.643499e-49 | -8.615850e-47 |
| Msa0700650 | Msa1433390 | 0.800378 | 1.482536e-48 | -8.615850e-47 |
| Msa0700650 | Msa1445940 | 0.837245 | 5.825567e-57 | -8.615850e-47 |
| Msa0700650 | Msa1447150 | 0.815225 | 1.030746e-51 | -8.615850e-47 |
| Msa0700650 | Msa1461280 | 0.806298 | 8.805915e-50 | -8.615850e-47 |
| Msa0700650 | Msa1466730 | 0.800476 | 1.415789e-48 | -8.615850e-47 |
| Msa0125450 | Msa0700650 | 0.800078 | 1.706251e-48 | -8.615850e-47 |
| Msa0125540 | Msa0700650 | 0.808071 | 3.708981e-50 | -8.615850e-47 |
| Msa0125880 | Msa0700650 | 0.805281 | 1.439895e-49 | -8.615850e-47 |
| Msa0126370 | Msa0700650 | 0.810107 | 1.358789e-50 | -8.615850e-47 |
| Msa0140300 | Msa0700650 | 0.814559 | 1.448899e-51 | -8.615850e-47 |
| Msa0142950 | Msa0700650 | 0.820274 | 7.479584e-53 | -8.615850e-47 |
| Msa0143540 | Msa0700650 | 0.824575 | 7.491956e-54 | -8.615850e-47 |
| Msa0151180 | Msa0700650 | 0.807512 | 4.875380e-50 | -8.615850e-47 |
| Msa0159930 | Msa0700650 | 0.802004 | 6.890388e-49 | -8.615850e-47 |
| Msa0170570 | Msa0700650 | 0.850230 | 1.942167e-60 | -8.615850e-47 |
| Msa0173070 | Msa0700650 | 0.800074 | 1.709280e-48 | -8.615850e-47 |
| Msa0183050 | Msa0700650 | 0.817124 | 3.880427e-52 | -8.615850e-47 |
| Msa0184040 | Msa0700650 | 0.801434 | 9.022394e-49 | -8.615850e-47 |
| Msa0195630 | Msa0700650 | 0.813508 | 2.470632e-51 | -8.615850e-47 |
| Msa0205850 | Msa0700650 | 0.831165 | 1.948742e-55 | -8.615850e-47 |
| Msa0206010 | Msa0700650 | 0.800817 | 1.206093e-48 | -8.615850e-47 |
| Msa0216240 | Msa0700650 | 0.855308 | 6.882755e-62 | -8.615850e-47 |
| Msa0237410 | Msa0700650 | 0.826191 | 3.106174e-54 | -8.615850e-47 |
| Msa0376300 | Msa0700650 | 0.804529 | 2.067941e-49 | -8.615850e-47 |
| Msa0376310 | Msa0700650 | 0.809725 | 1.641548e-50 | -8.615850e-47 |
| Msa0376910 | Msa0700650 | 0.808521 | 2.973475e-50 | -8.615850e-47 |
| Msa0379640 | Msa0700650 | 0.814446 | 1.534289e-51 | -8.615850e-47 |
| Msa0381080 | Msa0700650 | 0.806520 | 7.904084e-50 | -8.615850e-47 |
| Msa0391690 | Msa0700650 | 0.817362 | 3.430212e-52 | -8.615850e-47 |
| Msa0423520 | Msa0700650 | 0.805216 | 1.485979e-49 | -8.615850e-47 |
| Msa0426900 | Msa0700650 | 0.803940 | 2.742080e-49 | -8.615850e-47 |
| Msa0428170 | Msa0700650 | 0.805321 | 1.412524e-49 | -8.615850e-47 |
| Msa0433360 | Msa0700650 | 0.830426 | 2.956369e-55 | -8.615850e-47 |
| Msa0449830 | Msa0700650 | 0.806189 | 9.282875e-50 | -8.615850e-47 |
| Msa0462390 | Msa0700650 | 0.815269 | 1.008016e-51 | -8.615850e-47 |
| Msa0462430 | Msa0700650 | 0.810422 | 1.161938e-50 | -8.615850e-47 |
| Msa0462480 | Msa0700650 | 0.820643 | 6.155124e-53 | -8.615850e-47 |
| Msa0479970 | Msa0700650 | 0.805964 | 1.034939e-49 | -8.615850e-47 |
| Msa0243710 | Msa0700650 | 0.812436 | 4.244064e-51 | -8.615850e-47 |
| Msa0245940 | Msa0700650 | 0.803427 | 3.503556e-49 | -8.615850e-47 |
| Msa0248520 | Msa0700650 | 0.817357 | 3.439207e-52 | -8.615850e-47 |
| Msa0250670 | Msa0700650 | 0.804513 | 2.083679e-49 | -8.615850e-47 |
| Msa0260810 | Msa0700650 | 0.811621 | 6.387793e-51 | -8.615850e-47 |
| Msa0267870 | Msa0700650 | 0.804996 | 1.652243e-49 | -8.615850e-47 |
| Msa0282250 | Msa0700650 | 0.828705 | 7.748448e-55 | -8.615850e-47 |
| Msa0285330 | Msa0700650 | 0.813086 | 3.058560e-51 | -8.615850e-47 |
| Msa0286670 | Msa0700650 | 0.824858 | 6.425576e-54 | -8.615850e-47 |
| Msa0287410 | Msa0700650 | 0.815070 | 1.116012e-51 | -8.615850e-47 |
| Msa0287650 | Msa0700650 | 0.816513 | 5.318986e-52 | -8.615850e-47 |
| Msa0295590 | Msa0700650 | 0.808363 | 3.213700e-50 | -8.615850e-47 |
| Msa0305700 | Msa0700650 | 0.823535 | 1.314656e-53 | -8.615850e-47 |
| Msa0311700 | Msa0700650 | 0.836965 | 6.869493e-57 | -8.615850e-47 |
| Msa0316940 | Msa0700650 | 0.806388 | 8.427299e-50 | -8.615850e-47 |
| Msa0324240 | Msa0700650 | 0.824002 | 1.021835e-53 | -8.615850e-47 |
| Msa0326110 | Msa0700650 | 0.803949 | 2.730515e-49 | -8.615850e-47 |
| Msa0327410 | Msa0700650 | 0.823566 | 1.293086e-53 | -8.615850e-47 |
| Msa0333920 | Msa0700650 | 0.800370 | 1.487678e-48 | -8.615850e-47 |
| Msa0334040 | Msa0700650 | 0.806980 | 6.321065e-50 | -8.615850e-47 |
| Msa0334360 | Msa0700650 | 0.846208 | 2.509520e-59 | -8.615850e-47 |
| Msa0346430 | Msa0700650 | 0.816951 | 4.242429e-52 | -8.615850e-47 |
| Msa0351380 | Msa0700650 | 0.801731 | 7.840236e-49 | -8.615850e-47 |
| Msa0363640 | Msa0700650 | 0.811563 | 6.576301e-51 | -8.615850e-47 |
| Msa0484780 | Msa0700650 | 0.815471 | 9.088090e-52 | -8.615850e-47 |
| Msa0484840 | Msa0700650 | 0.817354 | 3.443713e-52 | -8.615850e-47 |
| Msa0504780 | Msa0700650 | 0.813897 | 2.028039e-51 | -8.615850e-47 |
| Msa0507680 | Msa0700650 | 0.802420 | 5.659522e-49 | -8.615850e-47 |
| Msa0523460 | Msa0700650 | 0.809895 | 1.509528e-50 | -8.615850e-47 |
| Msa0524500 | Msa0700650 | 0.809929 | 1.483786e-50 | -8.615850e-47 |
| Msa0545070 | Msa0700650 | 0.815423 | 9.314820e-52 | -8.615850e-47 |
| Msa0547890 | Msa0700650 | 0.800836 | 1.195434e-48 | -8.615850e-47 |
| Msa0564130 | Msa0700650 | 0.829414 | 5.217779e-55 | -8.615850e-47 |
| Msa0575470 | Msa0700650 | 0.810601 | 1.062777e-50 | -8.615850e-47 |
| Msa0578860 | Msa0700650 | 0.800090 | 1.696212e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700650 | MtrunA17_Chr8g0378201 | 90.977 | 266 | 22 | 2 | 62 | 325 | 134 | 399 | 1.70e-114 | 339 |
| Msa0700650 | MtrunA17_Chr8g0378201 | 93.023 | 43 | 3 | 0 | 1 | 43 | 1 | 43 | 1.40e-18 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 131 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGTCCATTTCTTCCTTCT+TGG | 0.160653 | 4_4:-71773472 | None:intergenic |
| GATAATGAGGTGATAGGTTT+AGG | 0.216881 | 4_4:+71774025 | Msa0700650:CDS |
| AATAATGAGTTGTTAGGATT+TGG | 0.218370 | 4_4:+71773872 | Msa0700650:CDS |
| CAAAATTTGCATCATGTAAA+TGG | 0.242690 | 4_4:+71774701 | Msa0700650:CDS |
| ATAATGAGTTGTTAGGATTT+GGG | 0.254136 | 4_4:+71773873 | Msa0700650:CDS |
| TTTGGGCATATGGGTCATTC+AGG | 0.261206 | 4_4:+71773962 | Msa0700650:CDS |
| TTTCACCATACTTGTCGATT+AGG | 0.298708 | 4_4:-71773510 | None:intergenic |
| TATGGCTGAGTTTGGGCATA+TGG | 0.306433 | 4_4:+71773952 | Msa0700650:CDS |
| TTCACCATACTTGTCGATTA+GGG | 0.311119 | 4_4:-71773509 | None:intergenic |
| ATAATGAGGTGATAGGTTTA+GGG | 0.324740 | 4_4:+71774026 | Msa0700650:CDS |
| TTCCTTCTTGGAGGAATCAT+TGG | 0.332591 | 4_4:-71773460 | None:intergenic |
| TGCATCATTGTGAAAGATAA+TGG | 0.334328 | 4_4:-71774680 | None:intergenic |
| AGGATTTGGGGACGGCGATC+GGG | 0.335634 | 4_4:+71773886 | Msa0700650:CDS |
| GGGAAAAGGAGAGGAGAGAA+AGG | 0.336285 | 4_4:+71774341 | Msa0700650:CDS |
| GGAATGGATATGGCTGAGTT+TGG | 0.339401 | 4_4:+71773944 | Msa0700650:CDS |
| AAATCAGCACCGAGCAGAAA+TGG | 0.353850 | 4_4:+71774540 | Msa0700650:CDS |
| GGAGATCGAGATGGGTTTCT+TGG | 0.355872 | 4_4:+71773908 | Msa0700650:CDS |
| GGGTTTCTTGGTAGTGGTGG+TGG | 0.361161 | 4_4:+71773920 | Msa0700650:CDS |
| GGTGGAAATAATGAGTTGTT+AGG | 0.371046 | 4_4:+71773866 | Msa0700650:CDS |
| GGGAAAAGGTTAGGAGGCAG+AGG | 0.380089 | 4_4:+71774374 | Msa0700650:CDS |
| ATCCGATAGGCCAGCAGGTT+GGG | 0.386802 | 4_4:-71774640 | None:intergenic |
| GTCCATTTCTTCCTTCTTGG+AGG | 0.388092 | 4_4:-71773469 | None:intergenic |
| GGAGTTGATAATGAGGTGAT+AGG | 0.395706 | 4_4:+71774019 | Msa0700650:CDS |
| CTCATACACATAACCATTCT+CGG | 0.397651 | 4_4:-71774113 | None:intergenic |
| AAAGGGAGCGCGAGAGGCAG+AGG | 0.405523 | 4_4:+71774275 | Msa0700650:CDS |
| TGGTGGTGGAGGAATGGATA+TGG | 0.405888 | 4_4:+71773934 | Msa0700650:CDS |
| TTCCTCCAAGAAGGAAGAAA+TGG | 0.413290 | 4_4:+71773467 | Msa0700650:CDS |
| GGGAAGAGAGAATGAATTGC+AGG | 0.432882 | 4_4:+71774482 | Msa0700650:CDS |
| AAAACCCTAATCGACAAGTA+TGG | 0.433688 | 4_4:+71773505 | Msa0700650:CDS |
| TGGTTATGTGTATGAGGAAG+GGG | 0.434586 | 4_4:+71774120 | Msa0700650:CDS |
| GAGAATGAATTGCAGGAGGC+TGG | 0.436328 | 4_4:+71774489 | Msa0700650:CDS |
| GGGAGCGCGAGAGGCAGAGG+AGG | 0.437021 | 4_4:+71774278 | Msa0700650:CDS |
| TAGGATTTGGGGACGGCGAT+CGG | 0.440786 | 4_4:+71773885 | Msa0700650:CDS |
| AATCGACAAGTATGGTGAAA+TGG | 0.441441 | 4_4:+71773513 | Msa0700650:CDS |
| TATGGGTCATTCAGGGGATG+GGG | 0.445632 | 4_4:+71773970 | Msa0700650:CDS |
| TTTCTTGGTAGTGGTGGTGG+AGG | 0.446839 | 4_4:+71773923 | Msa0700650:CDS |
| AGGTTTAGGGTTTGACTATG+AGG | 0.447590 | 4_4:+71774039 | Msa0700650:CDS |
| CAGTGGACTGCCCAACCTGC+TGG | 0.450699 | 4_4:+71774630 | Msa0700650:CDS |
| GAATGGATATGGCTGAGTTT+GGG | 0.456485 | 4_4:+71773945 | Msa0700650:CDS |
| AGAAGGAGAGGGAAAAGGTT+AGG | 0.456908 | 4_4:+71774365 | Msa0700650:CDS |
| AAGGGAGAAGGAGAGGGAAA+AGG | 0.457555 | 4_4:+71774360 | Msa0700650:CDS |
| GTTGGGGCAGTTGAGAGAAA+TGG | 0.458119 | 4_4:+71774225 | Msa0700650:CDS |
| TGCCCAACCTGCTGGCCTAT+CGG | 0.458375 | 4_4:+71774638 | Msa0700650:CDS |
| CGAGATGGGTTTCTTGGTAG+TGG | 0.459697 | 4_4:+71773914 | Msa0700650:CDS |
| TTTCTCTCAACTGCCCCAAC+TGG | 0.468444 | 4_4:-71774222 | None:intergenic |
| AAGAAGAGGAAGGTTGTGAA+GGG | 0.470752 | 4_4:+71774166 | Msa0700650:CDS |
| GAGATTTGAGGAGAGGGAAA+AGG | 0.471046 | 4_4:+71774327 | Msa0700650:CDS |
| GGAAAAGGAGAGGAGAGAAA+GGG | 0.471563 | 4_4:+71774342 | Msa0700650:CDS |
| GGTGTCTGAGTGGGAAGCTA+TGG | 0.472685 | 4_4:+71774396 | Msa0700650:CDS |
| GGAGAGTTTGCGAGCAGAGT+GGG | 0.476865 | 4_4:+71774300 | Msa0700650:CDS |
| GGGAAAAGAGATTTGAGGAG+AGG | 0.478354 | 4_4:+71774320 | Msa0700650:CDS |
| TGGTAGTGGTGGTGGAGGAA+TGG | 0.479826 | 4_4:+71773928 | Msa0700650:CDS |
| GAGAGAAAGGGAGAAGGAGA+GGG | 0.481680 | 4_4:+71774354 | Msa0700650:CDS |
| GGAGAGAAAGGGAGAAGGAG+AGG | 0.481843 | 4_4:+71774353 | Msa0700650:CDS |
| GGAGAAGGAAAATGAAGATA+AGG | 0.482423 | 4_4:+71774417 | Msa0700650:CDS |
| ATATGGGTCATTCAGGGGAT+GGG | 0.484086 | 4_4:+71773969 | Msa0700650:CDS |
| TGAATTGCAGGAGGCTGGAA+TGG | 0.484463 | 4_4:+71774494 | Msa0700650:CDS |
| TTTGACTATGAGGCTGAAGA+TGG | 0.488055 | 4_4:+71774049 | Msa0700650:CDS |
| AATCAGCACCGAGCAGAAAT+GGG | 0.488690 | 4_4:+71774541 | Msa0700650:CDS |
| ATGGCTGAGTTTGGGCATAT+GGG | 0.491211 | 4_4:+71773953 | Msa0700650:CDS |
| TTTCTGGTGGAGAGTGTGAT+GGG | 0.492044 | 4_4:+71773733 | Msa0700650:CDS |
| GAAGAAGAGGAAGGTTGTGA+AGG | 0.494715 | 4_4:+71774165 | Msa0700650:CDS |
| AGTTGATTCGTGAGAGGGAA+CGG | 0.495920 | 4_4:+71774461 | Msa0700650:CDS |
| GTTGATTCGTGAGAGGGAAC+GGG | 0.496093 | 4_4:+71774462 | Msa0700650:CDS |
| AGTTGAGAGAAATGGAGGTT+CGG | 0.499877 | 4_4:+71774233 | Msa0700650:CDS |
| GGAAAAGAGATTTGAGGAGA+GGG | 0.501904 | 4_4:+71774321 | Msa0700650:CDS |
| GCACTTGTCCCATTTCTGCT+CGG | 0.509836 | 4_4:-71774549 | None:intergenic |
| GGCGATCGGGGAGATCGAGA+TGG | 0.510554 | 4_4:+71773899 | Msa0700650:CDS |
| TTGAGCAGCGCGAGATGGAA+AGG | 0.511596 | 4_4:+71774257 | Msa0700650:CDS |
| AATGGTTATGTGTATGAGGA+AGG | 0.513055 | 4_4:+71774118 | Msa0700650:CDS |
| GGAGAGGAGAGAAAGGGAGA+AGG | 0.513308 | 4_4:+71774348 | Msa0700650:CDS |
| AGGAGAGGGAAAAGGTTAGG+AGG | 0.513975 | 4_4:+71774368 | Msa0700650:CDS |
| AGATGGAAAGGGAGCGCGAG+AGG | 0.523211 | 4_4:+71774269 | Msa0700650:CDS |
| AGGAAAATGAAGATAAGGAA+AGG | 0.524324 | 4_4:+71774422 | Msa0700650:CDS |
| TAATGAGTTGTTAGGATTTG+GGG | 0.530909 | 4_4:+71773874 | Msa0700650:CDS |
| GTGAAGCAGAAGATCAAGAA+AGG | 0.531659 | 4_4:+71773705 | Msa0700650:intron |
| TTGGGCATATGGGTCATTCA+GGG | 0.531915 | 4_4:+71773963 | Msa0700650:CDS |
| CATATGGGTCATTCAGGGGA+TGG | 0.533007 | 4_4:+71773968 | Msa0700650:CDS |
| TGAAGCAGAAGATCAAGAAA+GGG | 0.534144 | 4_4:+71773706 | Msa0700650:intron |
| AGGAGGAGTTGATTCGTGAG+AGG | 0.535605 | 4_4:+71774455 | Msa0700650:CDS |
| GAGGAAGGTTGTGAAGGGGA+TGG | 0.536250 | 4_4:+71774171 | Msa0700650:CDS |
| TCGGTTTGAGCAGCGCGAGA+TGG | 0.536873 | 4_4:+71774252 | Msa0700650:CDS |
| GATCCGATAGGCCAGCAGGT+TGG | 0.537517 | 4_4:-71774641 | None:intergenic |
| AAATGGGACAAGTGCAGACT+CGG | 0.539639 | 4_4:+71774557 | Msa0700650:CDS |
| ATGGTTATGTGTATGAGGAA+GGG | 0.542891 | 4_4:+71774119 | Msa0700650:CDS |
| ATGAGAGAAGATGCCGAGAA+TGG | 0.544829 | 4_4:+71774100 | Msa0700650:CDS |
| GAATTCACATAACAAGCAAT+CGG | 0.545220 | 4_4:-71773585 | None:intergenic |
| TTGACTATGAGGCTGAAGAT+GGG | 0.546551 | 4_4:+71774050 | Msa0700650:CDS |
| CGAGAATGGTTATGTGTATG+AGG | 0.549700 | 4_4:+71774114 | Msa0700650:CDS |
| GAATTTGAAGAAGAAGAGGA+AGG | 0.550240 | 4_4:+71774156 | Msa0700650:CDS |
| GGAGCGCGAGAGGCAGAGGA+GGG | 0.550973 | 4_4:+71774279 | Msa0700650:CDS |
| AGAAGAGGAAGGTTGTGAAG+GGG | 0.552071 | 4_4:+71774167 | Msa0700650:CDS |
| GAATCTTAGCAGCCATTGCT+CGG | 0.552969 | 4_4:+71774597 | Msa0700650:CDS |
| TAAGGAAAGGAAAAGAAGAG+AGG | 0.554492 | 4_4:+71774435 | Msa0700650:CDS |
| GGTCATTCAGGGGATGGGGA+TGG | 0.556528 | 4_4:+71773974 | Msa0700650:CDS |
| GGAGGCTGGAATGGAAGAAG+AGG | 0.557572 | 4_4:+71774503 | Msa0700650:CDS |
| GTATGATCCGATAGGCCAGC+AGG | 0.563059 | 4_4:-71774645 | None:intergenic |
| TATGAGGAAGGGGAAGTGAC+GGG | 0.564004 | 4_4:+71774130 | Msa0700650:CDS |
| GTATGAGGAAGGGGAAGTGA+CGG | 0.565215 | 4_4:+71774129 | Msa0700650:CDS |
| GGAGGAGTTGATTCGTGAGA+GGG | 0.566702 | 4_4:+71774456 | Msa0700650:CDS |
| TTGAGGAGAGGGAAAAGGAG+AGG | 0.574409 | 4_4:+71774332 | Msa0700650:CDS |
| GAGGCAGAGGGTGTCTGAGT+GGG | 0.575975 | 4_4:+71774387 | Msa0700650:CDS |
| GATGGGTTTCTTGGTAGTGG+TGG | 0.578171 | 4_4:+71773917 | Msa0700650:CDS |
| GGAAAGGAAAAGAAGAGAGG+AGG | 0.579942 | 4_4:+71774438 | Msa0700650:CDS |
| GGATTTGGGGACGGCGATCG+GGG | 0.579977 | 4_4:+71773887 | Msa0700650:CDS |
| GTTCGAATTTGAAGAAGAAG+AGG | 0.584176 | 4_4:+71774152 | Msa0700650:CDS |
| TGAGCAGCGCGAGATGGAAA+GGG | 0.586120 | 4_4:+71774258 | Msa0700650:CDS |
| TGGGCATATGGGTCATTCAG+GGG | 0.587540 | 4_4:+71773964 | Msa0700650:CDS |
| GCGATCGGGGAGATCGAGAT+GGG | 0.587801 | 4_4:+71773900 | Msa0700650:CDS |
| AGGGGATGGAAAAGAAGATG+TGG | 0.593535 | 4_4:+71774185 | Msa0700650:CDS |
| TGCCAATGATTCCTCCAAGA+AGG | 0.595383 | 4_4:+71773458 | None:intergenic |
| GGAAAAGGTTAGGAGGCAGA+GGG | 0.600754 | 4_4:+71774375 | Msa0700650:CDS |
| CATCTTCGCGAGAGAACCAT+CGG | 0.605545 | 4_4:-71773539 | None:intergenic |
| TGCTCGGTATATTCTCGCAG+TGG | 0.610793 | 4_4:+71774613 | Msa0700650:CDS |
| TATGGTGAAATGGTTACCGA+TGG | 0.622176 | 4_4:+71773523 | Msa0700650:CDS |
| TGCGAGAATATACCGAGCAA+TGG | 0.623485 | 4_4:-71774609 | None:intergenic |
| TGACTATGAGGCTGAAGATG+GGG | 0.628013 | 4_4:+71774051 | Msa0700650:CDS |
| GGAGGCAGAGGGTGTCTGAG+TGG | 0.630414 | 4_4:+71774386 | Msa0700650:CDS |
| GGGGCAGTTGAGAGAAATGG+AGG | 0.630533 | 4_4:+71774228 | Msa0700650:CDS |
| TGAGTGGGAAGCTATGGAGA+AGG | 0.634490 | 4_4:+71774402 | Msa0700650:CDS |
| GAGTTGTTAGGATTTGGGGA+CGG | 0.639788 | 4_4:+71773878 | Msa0700650:CDS |
| GGATGGAAAAGAAGATGTGG+AGG | 0.640165 | 4_4:+71774188 | Msa0700650:CDS |
| AGAGTGGGAAAAGAGATTTG+AGG | 0.643952 | 4_4:+71774315 | Msa0700650:CDS |
| TAGCACTAGTATGATCCGAT+AGG | 0.648983 | 4_4:-71774653 | None:intergenic |
| GAAGCAGAAGATCAAGAAAG+GGG | 0.662267 | 4_4:+71773707 | Msa0700650:intron |
| CTATGAGGCTGAAGATGGGG+AGG | 0.662845 | 4_4:+71774054 | Msa0700650:CDS |
| GGGAGAGTTTGCGAGCAGAG+TGG | 0.666790 | 4_4:+71774299 | Msa0700650:CDS |
| AAGAGAGAATGAATTGCAGG+AGG | 0.671244 | 4_4:+71774485 | Msa0700650:CDS |
| TATGGATGGAGTTGATAATG+AGG | 0.685698 | 4_4:+71774012 | Msa0700650:CDS |
| GATGGAAAAGAAGATGTGGA+GGG | 0.695627 | 4_4:+71774189 | Msa0700650:CDS |
| TGTGGTTGGCTGCAGCACGG+TGG | 0.721842 | 4_4:+71773848 | Msa0700650:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTCTAATTTTCTTAGGTATA+AGG | + | chr4_4:71773794-71773813 | Msa0700650:intron | 25.0% |
| ! | AATAATGAGTTGTTAGGATT+TGG | + | chr4_4:71773872-71773891 | Msa0700650:CDS | 25.0% |
| ! | ATAATGAGTTGTTAGGATTT+GGG | + | chr4_4:71773873-71773892 | Msa0700650:CDS | 25.0% |
| ! | CAAAATTTGCATCATGTAAA+TGG | + | chr4_4:71774701-71774720 | Msa0700650:CDS | 25.0% |
| !! | GTCTAATTTTCTTAGGTATA+AGG | + | chr4_4:71773794-71773813 | Msa0700650:intron | 25.0% |
| ! | AATAATGAGTTGTTAGGATT+TGG | + | chr4_4:71773872-71773891 | Msa0700650:CDS | 25.0% |
| ! | ATAATGAGTTGTTAGGATTT+GGG | + | chr4_4:71773873-71773892 | Msa0700650:CDS | 25.0% |
| ! | CAAAATTTGCATCATGTAAA+TGG | + | chr4_4:71774701-71774720 | Msa0700650:CDS | 25.0% |
| GAATTCACATAACAAGCAAT+CGG | - | chr4_4:71773588-71773607 | None:intergenic | 30.0% | |
| !! | GATTGCTTGTTATGTGAATT+CGG | + | chr4_4:71773587-71773606 | Msa0700650:intron | 30.0% |
| ! | TTGGAAAGATGTTTCTACAA+AGG | + | chr4_4:71773653-71773672 | Msa0700650:intron | 30.0% |
| !! | CTCATTGGTCTAATTTTCTT+AGG | + | chr4_4:71773787-71773806 | Msa0700650:intron | 30.0% |
| TAATGAGTTGTTAGGATTTG+GGG | + | chr4_4:71773874-71773893 | Msa0700650:CDS | 30.0% | |
| ATAATGAGGTGATAGGTTTA+GGG | + | chr4_4:71774026-71774045 | Msa0700650:CDS | 30.0% | |
| !! | TGAATTTTAATGGGAATGGA+GGG | + | chr4_4:71774077-71774096 | Msa0700650:CDS | 30.0% |
| AGGAAAATGAAGATAAGGAA+AGG | + | chr4_4:71774422-71774441 | Msa0700650:CDS | 30.0% | |
| TGCATCATTGTGAAAGATAA+TGG | - | chr4_4:71774683-71774702 | None:intergenic | 30.0% | |
| GAATTCACATAACAAGCAAT+CGG | - | chr4_4:71773588-71773607 | None:intergenic | 30.0% | |
| !! | GATTGCTTGTTATGTGAATT+CGG | + | chr4_4:71773587-71773606 | Msa0700650:intron | 30.0% |
| ! | TTGGAAAGATGTTTCTACAA+AGG | + | chr4_4:71773653-71773672 | Msa0700650:intron | 30.0% |
| !! | CTCATTGGTCTAATTTTCTT+AGG | + | chr4_4:71773787-71773806 | Msa0700650:intron | 30.0% |
| TAATGAGTTGTTAGGATTTG+GGG | + | chr4_4:71773874-71773893 | Msa0700650:CDS | 30.0% | |
| ATAATGAGGTGATAGGTTTA+GGG | + | chr4_4:71774026-71774045 | Msa0700650:CDS | 30.0% | |
| !! | TGAATTTTAATGGGAATGGA+GGG | + | chr4_4:71774077-71774096 | Msa0700650:CDS | 30.0% |
| AGGAAAATGAAGATAAGGAA+AGG | + | chr4_4:71774422-71774441 | Msa0700650:CDS | 30.0% | |
| TGCATCATTGTGAAAGATAA+TGG | - | chr4_4:71774683-71774702 | None:intergenic | 30.0% | |
| AAAACCCTAATCGACAAGTA+TGG | + | chr4_4:71773505-71773524 | Msa0700650:CDS | 35.0% | |
| ! | TTCACCATACTTGTCGATTA+GGG | - | chr4_4:71773512-71773531 | None:intergenic | 35.0% |
| ! | TTTCACCATACTTGTCGATT+AGG | - | chr4_4:71773513-71773532 | None:intergenic | 35.0% |
| AATCGACAAGTATGGTGAAA+TGG | + | chr4_4:71773513-71773532 | Msa0700650:CDS | 35.0% | |
| ! | TATGAGGCATCAGTATTTGT+TGG | + | chr4_4:71773683-71773702 | Msa0700650:intron | 35.0% |
| TGAAGCAGAAGATCAAGAAA+GGG | + | chr4_4:71773706-71773725 | Msa0700650:intron | 35.0% | |
| !! | TTTGATGTTGCACTTGTTGT+TGG | + | chr4_4:71773823-71773842 | Msa0700650:intron | 35.0% |
| GGTGGAAATAATGAGTTGTT+AGG | + | chr4_4:71773866-71773885 | Msa0700650:CDS | 35.0% | |
| !! | TATGGATGGAGTTGATAATG+AGG | + | chr4_4:71774012-71774031 | Msa0700650:CDS | 35.0% |
| GATAATGAGGTGATAGGTTT+AGG | + | chr4_4:71774025-71774044 | Msa0700650:CDS | 35.0% | |
| !! | ATGGGGAGGTGAATTTTAAT+GGG | + | chr4_4:71774068-71774087 | Msa0700650:CDS | 35.0% |
| !! | GAGGTGAATTTTAATGGGAA+TGG | + | chr4_4:71774073-71774092 | Msa0700650:CDS | 35.0% |
| !! | GTGAATTTTAATGGGAATGG+AGG | + | chr4_4:71774076-71774095 | Msa0700650:CDS | 35.0% |
| CTCATACACATAACCATTCT+CGG | - | chr4_4:71774116-71774135 | None:intergenic | 35.0% | |
| AATGGTTATGTGTATGAGGA+AGG | + | chr4_4:71774118-71774137 | Msa0700650:CDS | 35.0% | |
| ATGGTTATGTGTATGAGGAA+GGG | + | chr4_4:71774119-71774138 | Msa0700650:CDS | 35.0% | |
| GTTCGAATTTGAAGAAGAAG+AGG | + | chr4_4:71774152-71774171 | Msa0700650:CDS | 35.0% | |
| GAATTTGAAGAAGAAGAGGA+AGG | + | chr4_4:71774156-71774175 | Msa0700650:CDS | 35.0% | |
| GGAGAAGGAAAATGAAGATA+AGG | + | chr4_4:71774417-71774436 | Msa0700650:CDS | 35.0% | |
| TAAGGAAAGGAAAAGAAGAG+AGG | + | chr4_4:71774435-71774454 | Msa0700650:CDS | 35.0% | |
| AAAACCCTAATCGACAAGTA+TGG | + | chr4_4:71773505-71773524 | Msa0700650:CDS | 35.0% | |
| ! | TTCACCATACTTGTCGATTA+GGG | - | chr4_4:71773512-71773531 | None:intergenic | 35.0% |
| ! | TTTCACCATACTTGTCGATT+AGG | - | chr4_4:71773513-71773532 | None:intergenic | 35.0% |
| AATCGACAAGTATGGTGAAA+TGG | + | chr4_4:71773513-71773532 | Msa0700650:CDS | 35.0% | |
| ! | TATGAGGCATCAGTATTTGT+TGG | + | chr4_4:71773683-71773702 | Msa0700650:intron | 35.0% |
| TGAAGCAGAAGATCAAGAAA+GGG | + | chr4_4:71773706-71773725 | Msa0700650:intron | 35.0% | |
| !! | TTTGATGTTGCACTTGTTGT+TGG | + | chr4_4:71773823-71773842 | Msa0700650:intron | 35.0% |
| GGTGGAAATAATGAGTTGTT+AGG | + | chr4_4:71773866-71773885 | Msa0700650:CDS | 35.0% | |
| !! | TATGGATGGAGTTGATAATG+AGG | + | chr4_4:71774012-71774031 | Msa0700650:CDS | 35.0% |
| GATAATGAGGTGATAGGTTT+AGG | + | chr4_4:71774025-71774044 | Msa0700650:CDS | 35.0% | |
| !! | ATGGGGAGGTGAATTTTAAT+GGG | + | chr4_4:71774068-71774087 | Msa0700650:CDS | 35.0% |
| !! | GAGGTGAATTTTAATGGGAA+TGG | + | chr4_4:71774073-71774092 | Msa0700650:CDS | 35.0% |
| !! | GTGAATTTTAATGGGAATGG+AGG | + | chr4_4:71774076-71774095 | Msa0700650:CDS | 35.0% |
| CTCATACACATAACCATTCT+CGG | - | chr4_4:71774116-71774135 | None:intergenic | 35.0% | |
| AATGGTTATGTGTATGAGGA+AGG | + | chr4_4:71774118-71774137 | Msa0700650:CDS | 35.0% | |
| ATGGTTATGTGTATGAGGAA+GGG | + | chr4_4:71774119-71774138 | Msa0700650:CDS | 35.0% | |
| GTTCGAATTTGAAGAAGAAG+AGG | + | chr4_4:71774152-71774171 | Msa0700650:CDS | 35.0% | |
| GAATTTGAAGAAGAAGAGGA+AGG | + | chr4_4:71774156-71774175 | Msa0700650:CDS | 35.0% | |
| GGAGAAGGAAAATGAAGATA+AGG | + | chr4_4:71774417-71774436 | Msa0700650:CDS | 35.0% | |
| TAAGGAAAGGAAAAGAAGAG+AGG | + | chr4_4:71774435-71774454 | Msa0700650:CDS | 35.0% | |
| TTCCTCCAAGAAGGAAGAAA+TGG | + | chr4_4:71773467-71773486 | Msa0700650:CDS | 40.0% | |
| TCAGTCCATTTCTTCCTTCT+TGG | - | chr4_4:71773475-71773494 | None:intergenic | 40.0% | |
| TATGGTGAAATGGTTACCGA+TGG | + | chr4_4:71773523-71773542 | Msa0700650:CDS | 40.0% | |
| TTTATCCTTGGCAATGGAGT+TGG | + | chr4_4:71773634-71773653 | Msa0700650:intron | 40.0% | |
| ! | CTACAAAGGTGCAGAATATG+AGG | + | chr4_4:71773667-71773686 | Msa0700650:intron | 40.0% |
| GTGAAGCAGAAGATCAAGAA+AGG | + | chr4_4:71773705-71773724 | Msa0700650:intron | 40.0% | |
| GAAGCAGAAGATCAAGAAAG+GGG | + | chr4_4:71773707-71773726 | Msa0700650:intron | 40.0% | |
| ! | ATCAAGAAAGGGGAGTTTTC+TGG | + | chr4_4:71773717-71773736 | Msa0700650:CDS | 40.0% |
| ATGGGAGTAGTGAGTTTGAT+TGG | + | chr4_4:71773751-71773770 | Msa0700650:intron | 40.0% | |
| GAGTAGTGAGTTTGATTGGA+TGG | + | chr4_4:71773755-71773774 | Msa0700650:intron | 40.0% | |
| TAGTGAGTTTGATTGGATGG+AGG | + | chr4_4:71773758-71773777 | Msa0700650:intron | 40.0% | |
| AGTGAGTTTGATTGGATGGA+GGG | + | chr4_4:71773759-71773778 | Msa0700650:intron | 40.0% | |
| GAATGGATATGGCTGAGTTT+GGG | + | chr4_4:71773945-71773964 | Msa0700650:CDS | 40.0% | |
| !! | GGAGTTGATAATGAGGTGAT+AGG | + | chr4_4:71774019-71774038 | Msa0700650:CDS | 40.0% |
| ! | AGGTTTAGGGTTTGACTATG+AGG | + | chr4_4:71774039-71774058 | Msa0700650:CDS | 40.0% |
| TTTGACTATGAGGCTGAAGA+TGG | + | chr4_4:71774049-71774068 | Msa0700650:CDS | 40.0% | |
| TTGACTATGAGGCTGAAGAT+GGG | + | chr4_4:71774050-71774069 | Msa0700650:CDS | 40.0% | |
| ! | GATGGGGAGGTGAATTTTAA+TGG | + | chr4_4:71774067-71774086 | Msa0700650:CDS | 40.0% |
| CGAGAATGGTTATGTGTATG+AGG | + | chr4_4:71774114-71774133 | Msa0700650:CDS | 40.0% | |
| TGGTTATGTGTATGAGGAAG+GGG | + | chr4_4:71774120-71774139 | Msa0700650:CDS | 40.0% | |
| AAGAAGAGGAAGGTTGTGAA+GGG | + | chr4_4:71774166-71774185 | Msa0700650:CDS | 40.0% | |
| GATGGAAAAGAAGATGTGGA+GGG | + | chr4_4:71774189-71774208 | Msa0700650:CDS | 40.0% | |
| ! | AGGGTTTTTGCTAACCAGTT+GGG | + | chr4_4:71774208-71774227 | Msa0700650:CDS | 40.0% |
| AGTTGAGAGAAATGGAGGTT+CGG | + | chr4_4:71774233-71774252 | Msa0700650:CDS | 40.0% | |
| AGAGTGGGAAAAGAGATTTG+AGG | + | chr4_4:71774315-71774334 | Msa0700650:CDS | 40.0% | |
| GGAAAAGAGATTTGAGGAGA+GGG | + | chr4_4:71774321-71774340 | Msa0700650:CDS | 40.0% | |
| AAGAGAGAATGAATTGCAGG+AGG | + | chr4_4:71774485-71774504 | Msa0700650:CDS | 40.0% | |
| TAGCACTAGTATGATCCGAT+AGG | - | chr4_4:71774656-71774675 | None:intergenic | 40.0% | |
| TTCCTCCAAGAAGGAAGAAA+TGG | + | chr4_4:71773467-71773486 | Msa0700650:CDS | 40.0% | |
| TCAGTCCATTTCTTCCTTCT+TGG | - | chr4_4:71773475-71773494 | None:intergenic | 40.0% | |
| TATGGTGAAATGGTTACCGA+TGG | + | chr4_4:71773523-71773542 | Msa0700650:CDS | 40.0% | |
| TTTATCCTTGGCAATGGAGT+TGG | + | chr4_4:71773634-71773653 | Msa0700650:intron | 40.0% | |
| ! | CTACAAAGGTGCAGAATATG+AGG | + | chr4_4:71773667-71773686 | Msa0700650:intron | 40.0% |
| GTGAAGCAGAAGATCAAGAA+AGG | + | chr4_4:71773705-71773724 | Msa0700650:intron | 40.0% | |
| GAAGCAGAAGATCAAGAAAG+GGG | + | chr4_4:71773707-71773726 | Msa0700650:intron | 40.0% | |
| ! | ATCAAGAAAGGGGAGTTTTC+TGG | + | chr4_4:71773717-71773736 | Msa0700650:CDS | 40.0% |
| ATGGGAGTAGTGAGTTTGAT+TGG | + | chr4_4:71773751-71773770 | Msa0700650:intron | 40.0% | |
| GAGTAGTGAGTTTGATTGGA+TGG | + | chr4_4:71773755-71773774 | Msa0700650:intron | 40.0% | |
| TAGTGAGTTTGATTGGATGG+AGG | + | chr4_4:71773758-71773777 | Msa0700650:intron | 40.0% | |
| AGTGAGTTTGATTGGATGGA+GGG | + | chr4_4:71773759-71773778 | Msa0700650:intron | 40.0% | |
| GAATGGATATGGCTGAGTTT+GGG | + | chr4_4:71773945-71773964 | Msa0700650:CDS | 40.0% | |
| !! | GGAGTTGATAATGAGGTGAT+AGG | + | chr4_4:71774019-71774038 | Msa0700650:CDS | 40.0% |
| ! | AGGTTTAGGGTTTGACTATG+AGG | + | chr4_4:71774039-71774058 | Msa0700650:CDS | 40.0% |
| TTTGACTATGAGGCTGAAGA+TGG | + | chr4_4:71774049-71774068 | Msa0700650:CDS | 40.0% | |
| TTGACTATGAGGCTGAAGAT+GGG | + | chr4_4:71774050-71774069 | Msa0700650:CDS | 40.0% | |
| ! | GATGGGGAGGTGAATTTTAA+TGG | + | chr4_4:71774067-71774086 | Msa0700650:CDS | 40.0% |
| CGAGAATGGTTATGTGTATG+AGG | + | chr4_4:71774114-71774133 | Msa0700650:CDS | 40.0% | |
| TGGTTATGTGTATGAGGAAG+GGG | + | chr4_4:71774120-71774139 | Msa0700650:CDS | 40.0% | |
| AAGAAGAGGAAGGTTGTGAA+GGG | + | chr4_4:71774166-71774185 | Msa0700650:CDS | 40.0% | |
| GATGGAAAAGAAGATGTGGA+GGG | + | chr4_4:71774189-71774208 | Msa0700650:CDS | 40.0% | |
| ! | AGGGTTTTTGCTAACCAGTT+GGG | + | chr4_4:71774208-71774227 | Msa0700650:CDS | 40.0% |
| AGTTGAGAGAAATGGAGGTT+CGG | + | chr4_4:71774233-71774252 | Msa0700650:CDS | 40.0% | |
| AGAGTGGGAAAAGAGATTTG+AGG | + | chr4_4:71774315-71774334 | Msa0700650:CDS | 40.0% | |
| GGAAAAGAGATTTGAGGAGA+GGG | + | chr4_4:71774321-71774340 | Msa0700650:CDS | 40.0% | |
| AAGAGAGAATGAATTGCAGG+AGG | + | chr4_4:71774485-71774504 | Msa0700650:CDS | 40.0% | |
| TAGCACTAGTATGATCCGAT+AGG | - | chr4_4:71774656-71774675 | None:intergenic | 40.0% | |
| GTCCATTTCTTCCTTCTTGG+AGG | - | chr4_4:71773472-71773491 | None:intergenic | 45.0% | |
| CATTGCCAAGGATAAACCAC+CGG | - | chr4_4:71773630-71773649 | None:intergenic | 45.0% | |
| TCTTTCCAACTCCATTGCCA+AGG | - | chr4_4:71773642-71773661 | None:intergenic | 45.0% | |
| ! | AAGAAAGGGGAGTTTTCTGG+TGG | + | chr4_4:71773720-71773739 | Msa0700650:CDS | 45.0% |
| !! | TTTTCTGGTGGAGAGTGTGA+TGG | + | chr4_4:71773732-71773751 | Msa0700650:CDS | 45.0% |
| ! | TTTCTGGTGGAGAGTGTGAT+GGG | + | chr4_4:71773733-71773752 | Msa0700650:CDS | 45.0% |
| GTGAGTTTGATTGGATGGAG+GGG | + | chr4_4:71773760-71773779 | Msa0700650:intron | 45.0% | |
| !! | TTGCACTTGTTGTTGGTGTG+TGG | + | chr4_4:71773830-71773849 | Msa0700650:intron | 45.0% |
| !! | ACTTGTTGTTGGTGTGTGGT+TGG | + | chr4_4:71773834-71773853 | Msa0700650:intron | 45.0% |
| GAGTTGTTAGGATTTGGGGA+CGG | + | chr4_4:71773878-71773897 | Msa0700650:CDS | 45.0% | |
| GGAATGGATATGGCTGAGTT+TGG | + | chr4_4:71773944-71773963 | Msa0700650:CDS | 45.0% | |
| TATGGCTGAGTTTGGGCATA+TGG | + | chr4_4:71773952-71773971 | Msa0700650:CDS | 45.0% | |
| ATGGCTGAGTTTGGGCATAT+GGG | + | chr4_4:71773953-71773972 | Msa0700650:CDS | 45.0% | |
| TTTGGGCATATGGGTCATTC+AGG | + | chr4_4:71773962-71773981 | Msa0700650:CDS | 45.0% | |
| TTGGGCATATGGGTCATTCA+GGG | + | chr4_4:71773963-71773982 | Msa0700650:CDS | 45.0% | |
| ATATGGGTCATTCAGGGGAT+GGG | + | chr4_4:71773969-71773988 | Msa0700650:CDS | 45.0% | |
| ! | TGGTGATTTTGCGGTTGCTA+TGG | + | chr4_4:71773994-71774013 | Msa0700650:CDS | 45.0% |
| ! | GATTTTGCGGTTGCTATGGA+TGG | + | chr4_4:71773998-71774017 | Msa0700650:CDS | 45.0% |
| TGACTATGAGGCTGAAGATG+GGG | + | chr4_4:71774051-71774070 | Msa0700650:CDS | 45.0% | |
| ATGAGAGAAGATGCCGAGAA+TGG | + | chr4_4:71774100-71774119 | Msa0700650:CDS | 45.0% | |
| GAAGAAGAGGAAGGTTGTGA+AGG | + | chr4_4:71774165-71774184 | Msa0700650:CDS | 45.0% | |
| AGAAGAGGAAGGTTGTGAAG+GGG | + | chr4_4:71774167-71774186 | Msa0700650:CDS | 45.0% | |
| AGGGGATGGAAAAGAAGATG+TGG | + | chr4_4:71774185-71774204 | Msa0700650:CDS | 45.0% | |
| GGATGGAAAAGAAGATGTGG+AGG | + | chr4_4:71774188-71774207 | Msa0700650:CDS | 45.0% | |
| ! | GAGGGTTTTTGCTAACCAGT+TGG | + | chr4_4:71774207-71774226 | Msa0700650:CDS | 45.0% |
| ! | GGGTTTTTGCTAACCAGTTG+GGG | + | chr4_4:71774209-71774228 | Msa0700650:CDS | 45.0% |
| GGGAAAAGAGATTTGAGGAG+AGG | + | chr4_4:71774320-71774339 | Msa0700650:CDS | 45.0% | |
| GAGATTTGAGGAGAGGGAAA+AGG | + | chr4_4:71774327-71774346 | Msa0700650:CDS | 45.0% | |
| GGAAAAGGAGAGGAGAGAAA+GGG | + | chr4_4:71774342-71774361 | Msa0700650:CDS | 45.0% | |
| AGAAGGAGAGGGAAAAGGTT+AGG | + | chr4_4:71774365-71774384 | Msa0700650:CDS | 45.0% | |
| GGAAAGGAAAAGAAGAGAGG+AGG | + | chr4_4:71774438-71774457 | Msa0700650:CDS | 45.0% | |
| !! | AGTTGATTCGTGAGAGGGAA+CGG | + | chr4_4:71774461-71774480 | Msa0700650:CDS | 45.0% |
| GGGAAGAGAGAATGAATTGC+AGG | + | chr4_4:71774482-71774501 | Msa0700650:CDS | 45.0% | |
| ! | AAATCAGCACCGAGCAGAAA+TGG | + | chr4_4:71774540-71774559 | Msa0700650:CDS | 45.0% |
| ! | AATCAGCACCGAGCAGAAAT+GGG | + | chr4_4:71774541-71774560 | Msa0700650:CDS | 45.0% |
| AAATGGGACAAGTGCAGACT+CGG | + | chr4_4:71774557-71774576 | Msa0700650:CDS | 45.0% | |
| GAATCTTAGCAGCCATTGCT+CGG | + | chr4_4:71774597-71774616 | Msa0700650:CDS | 45.0% | |
| TGCGAGAATATACCGAGCAA+TGG | - | chr4_4:71774612-71774631 | None:intergenic | 45.0% | |
| GTCCATTTCTTCCTTCTTGG+AGG | - | chr4_4:71773472-71773491 | None:intergenic | 45.0% | |
| CATTGCCAAGGATAAACCAC+CGG | - | chr4_4:71773630-71773649 | None:intergenic | 45.0% | |
| TCTTTCCAACTCCATTGCCA+AGG | - | chr4_4:71773642-71773661 | None:intergenic | 45.0% | |
| ! | AAGAAAGGGGAGTTTTCTGG+TGG | + | chr4_4:71773720-71773739 | Msa0700650:CDS | 45.0% |
| !! | TTTTCTGGTGGAGAGTGTGA+TGG | + | chr4_4:71773732-71773751 | Msa0700650:CDS | 45.0% |
| ! | TTTCTGGTGGAGAGTGTGAT+GGG | + | chr4_4:71773733-71773752 | Msa0700650:CDS | 45.0% |
| GTGAGTTTGATTGGATGGAG+GGG | + | chr4_4:71773760-71773779 | Msa0700650:intron | 45.0% | |
| !! | TTGCACTTGTTGTTGGTGTG+TGG | + | chr4_4:71773830-71773849 | Msa0700650:intron | 45.0% |
| !! | ACTTGTTGTTGGTGTGTGGT+TGG | + | chr4_4:71773834-71773853 | Msa0700650:intron | 45.0% |
| GAGTTGTTAGGATTTGGGGA+CGG | + | chr4_4:71773878-71773897 | Msa0700650:CDS | 45.0% | |
| GGAATGGATATGGCTGAGTT+TGG | + | chr4_4:71773944-71773963 | Msa0700650:CDS | 45.0% | |
| TATGGCTGAGTTTGGGCATA+TGG | + | chr4_4:71773952-71773971 | Msa0700650:CDS | 45.0% | |
| ATGGCTGAGTTTGGGCATAT+GGG | + | chr4_4:71773953-71773972 | Msa0700650:CDS | 45.0% | |
| TTTGGGCATATGGGTCATTC+AGG | + | chr4_4:71773962-71773981 | Msa0700650:CDS | 45.0% | |
| TTGGGCATATGGGTCATTCA+GGG | + | chr4_4:71773963-71773982 | Msa0700650:CDS | 45.0% | |
| ATATGGGTCATTCAGGGGAT+GGG | + | chr4_4:71773969-71773988 | Msa0700650:CDS | 45.0% | |
| ! | TGGTGATTTTGCGGTTGCTA+TGG | + | chr4_4:71773994-71774013 | Msa0700650:CDS | 45.0% |
| ! | GATTTTGCGGTTGCTATGGA+TGG | + | chr4_4:71773998-71774017 | Msa0700650:CDS | 45.0% |
| TGACTATGAGGCTGAAGATG+GGG | + | chr4_4:71774051-71774070 | Msa0700650:CDS | 45.0% | |
| ATGAGAGAAGATGCCGAGAA+TGG | + | chr4_4:71774100-71774119 | Msa0700650:CDS | 45.0% | |
| GAAGAAGAGGAAGGTTGTGA+AGG | + | chr4_4:71774165-71774184 | Msa0700650:CDS | 45.0% | |
| AGAAGAGGAAGGTTGTGAAG+GGG | + | chr4_4:71774167-71774186 | Msa0700650:CDS | 45.0% | |
| AGGGGATGGAAAAGAAGATG+TGG | + | chr4_4:71774185-71774204 | Msa0700650:CDS | 45.0% | |
| GGATGGAAAAGAAGATGTGG+AGG | + | chr4_4:71774188-71774207 | Msa0700650:CDS | 45.0% | |
| ! | GAGGGTTTTTGCTAACCAGT+TGG | + | chr4_4:71774207-71774226 | Msa0700650:CDS | 45.0% |
| ! | GGGTTTTTGCTAACCAGTTG+GGG | + | chr4_4:71774209-71774228 | Msa0700650:CDS | 45.0% |
| GGGAAAAGAGATTTGAGGAG+AGG | + | chr4_4:71774320-71774339 | Msa0700650:CDS | 45.0% | |
| GAGATTTGAGGAGAGGGAAA+AGG | + | chr4_4:71774327-71774346 | Msa0700650:CDS | 45.0% | |
| GGAAAAGGAGAGGAGAGAAA+GGG | + | chr4_4:71774342-71774361 | Msa0700650:CDS | 45.0% | |
| AGAAGGAGAGGGAAAAGGTT+AGG | + | chr4_4:71774365-71774384 | Msa0700650:CDS | 45.0% | |
| GGAAAGGAAAAGAAGAGAGG+AGG | + | chr4_4:71774438-71774457 | Msa0700650:CDS | 45.0% | |
| !! | AGTTGATTCGTGAGAGGGAA+CGG | + | chr4_4:71774461-71774480 | Msa0700650:CDS | 45.0% |
| GGGAAGAGAGAATGAATTGC+AGG | + | chr4_4:71774482-71774501 | Msa0700650:CDS | 45.0% | |
| ! | AAATCAGCACCGAGCAGAAA+TGG | + | chr4_4:71774540-71774559 | Msa0700650:CDS | 45.0% |
| ! | AATCAGCACCGAGCAGAAAT+GGG | + | chr4_4:71774541-71774560 | Msa0700650:CDS | 45.0% |
| AAATGGGACAAGTGCAGACT+CGG | + | chr4_4:71774557-71774576 | Msa0700650:CDS | 45.0% | |
| GAATCTTAGCAGCCATTGCT+CGG | + | chr4_4:71774597-71774616 | Msa0700650:CDS | 45.0% | |
| TGCGAGAATATACCGAGCAA+TGG | - | chr4_4:71774612-71774631 | None:intergenic | 45.0% | |
| CATCTTCGCGAGAGAACCAT+CGG | - | chr4_4:71773542-71773561 | None:intergenic | 50.0% | |
| GGTTCATCATGTTCGCGATC+CGG | + | chr4_4:71773608-71773627 | Msa0700650:intron | 50.0% | |
| CGGTGGTTTATCCTTGGCAA+TGG | + | chr4_4:71773628-71773647 | Msa0700650:intron | 50.0% | |
| GGATGGAGGGGTTAACTCAT+TGG | + | chr4_4:71773772-71773791 | Msa0700650:intron | 50.0% | |
| ! | GGAGATCGAGATGGGTTTCT+TGG | + | chr4_4:71773908-71773927 | Msa0700650:CDS | 50.0% |
| ! | CGAGATGGGTTTCTTGGTAG+TGG | + | chr4_4:71773914-71773933 | Msa0700650:CDS | 50.0% |
| !! | GATGGGTTTCTTGGTAGTGG+TGG | + | chr4_4:71773917-71773936 | Msa0700650:CDS | 50.0% |
| !! | TTTCTTGGTAGTGGTGGTGG+AGG | + | chr4_4:71773923-71773942 | Msa0700650:CDS | 50.0% |
| !! | TGGTGGTGGAGGAATGGATA+TGG | + | chr4_4:71773934-71773953 | Msa0700650:CDS | 50.0% |
| TGGGCATATGGGTCATTCAG+GGG | + | chr4_4:71773964-71773983 | Msa0700650:CDS | 50.0% | |
| CATATGGGTCATTCAGGGGA+TGG | + | chr4_4:71773968-71773987 | Msa0700650:CDS | 50.0% | |
| TATGGGTCATTCAGGGGATG+GGG | + | chr4_4:71773970-71773989 | Msa0700650:CDS | 50.0% | |
| ! | GGATGGGGATGGTGATTTTG+CGG | + | chr4_4:71773985-71774004 | Msa0700650:CDS | 50.0% |
| GTATGAGGAAGGGGAAGTGA+CGG | + | chr4_4:71774129-71774148 | Msa0700650:CDS | 50.0% | |
| TATGAGGAAGGGGAAGTGAC+GGG | + | chr4_4:71774130-71774149 | Msa0700650:CDS | 50.0% | |
| TTTCTCTCAACTGCCCCAAC+TGG | - | chr4_4:71774225-71774244 | None:intergenic | 50.0% | |
| GTTGGGGCAGTTGAGAGAAA+TGG | + | chr4_4:71774225-71774244 | Msa0700650:CDS | 50.0% | |
| TTGAGGAGAGGGAAAAGGAG+AGG | + | chr4_4:71774332-71774351 | Msa0700650:CDS | 50.0% | |
| GGGAAAAGGAGAGGAGAGAA+AGG | + | chr4_4:71774341-71774360 | Msa0700650:CDS | 50.0% | |
| GAGAGAAAGGGAGAAGGAGA+GGG | + | chr4_4:71774354-71774373 | Msa0700650:CDS | 50.0% | |
| AAGGGAGAAGGAGAGGGAAA+AGG | + | chr4_4:71774360-71774379 | Msa0700650:CDS | 50.0% | |
| AGGAGAGGGAAAAGGTTAGG+AGG | + | chr4_4:71774368-71774387 | Msa0700650:CDS | 50.0% | |
| GGAAAAGGTTAGGAGGCAGA+GGG | + | chr4_4:71774375-71774394 | Msa0700650:CDS | 50.0% | |
| TGAGTGGGAAGCTATGGAGA+AGG | + | chr4_4:71774402-71774421 | Msa0700650:CDS | 50.0% | |
| !! | AGGAGGAGTTGATTCGTGAG+AGG | + | chr4_4:71774455-71774474 | Msa0700650:CDS | 50.0% |
| !! | GGAGGAGTTGATTCGTGAGA+GGG | + | chr4_4:71774456-71774475 | Msa0700650:CDS | 50.0% |
| !! | GTTGATTCGTGAGAGGGAAC+GGG | + | chr4_4:71774462-71774481 | Msa0700650:CDS | 50.0% |
| GAGAATGAATTGCAGGAGGC+TGG | + | chr4_4:71774489-71774508 | Msa0700650:CDS | 50.0% | |
| TGAATTGCAGGAGGCTGGAA+TGG | + | chr4_4:71774494-71774513 | Msa0700650:CDS | 50.0% | |
| GCACTTGTCCCATTTCTGCT+CGG | - | chr4_4:71774552-71774571 | None:intergenic | 50.0% | |
| TGCTCGGTATATTCTCGCAG+TGG | + | chr4_4:71774613-71774632 | Msa0700650:CDS | 50.0% | |
| CATCTTCGCGAGAGAACCAT+CGG | - | chr4_4:71773542-71773561 | None:intergenic | 50.0% | |
| GGTTCATCATGTTCGCGATC+CGG | + | chr4_4:71773608-71773627 | Msa0700650:intron | 50.0% | |
| CGGTGGTTTATCCTTGGCAA+TGG | + | chr4_4:71773628-71773647 | Msa0700650:intron | 50.0% | |
| GGATGGAGGGGTTAACTCAT+TGG | + | chr4_4:71773772-71773791 | Msa0700650:intron | 50.0% | |
| ! | GGAGATCGAGATGGGTTTCT+TGG | + | chr4_4:71773908-71773927 | Msa0700650:CDS | 50.0% |
| ! | CGAGATGGGTTTCTTGGTAG+TGG | + | chr4_4:71773914-71773933 | Msa0700650:CDS | 50.0% |
| !! | GATGGGTTTCTTGGTAGTGG+TGG | + | chr4_4:71773917-71773936 | Msa0700650:CDS | 50.0% |
| !! | TTTCTTGGTAGTGGTGGTGG+AGG | + | chr4_4:71773923-71773942 | Msa0700650:CDS | 50.0% |
| !! | TGGTGGTGGAGGAATGGATA+TGG | + | chr4_4:71773934-71773953 | Msa0700650:CDS | 50.0% |
| TGGGCATATGGGTCATTCAG+GGG | + | chr4_4:71773964-71773983 | Msa0700650:CDS | 50.0% | |
| CATATGGGTCATTCAGGGGA+TGG | + | chr4_4:71773968-71773987 | Msa0700650:CDS | 50.0% | |
| TATGGGTCATTCAGGGGATG+GGG | + | chr4_4:71773970-71773989 | Msa0700650:CDS | 50.0% | |
| ! | GGATGGGGATGGTGATTTTG+CGG | + | chr4_4:71773985-71774004 | Msa0700650:CDS | 50.0% |
| GTATGAGGAAGGGGAAGTGA+CGG | + | chr4_4:71774129-71774148 | Msa0700650:CDS | 50.0% | |
| TATGAGGAAGGGGAAGTGAC+GGG | + | chr4_4:71774130-71774149 | Msa0700650:CDS | 50.0% | |
| TTTCTCTCAACTGCCCCAAC+TGG | - | chr4_4:71774225-71774244 | None:intergenic | 50.0% | |
| GTTGGGGCAGTTGAGAGAAA+TGG | + | chr4_4:71774225-71774244 | Msa0700650:CDS | 50.0% | |
| TTGAGGAGAGGGAAAAGGAG+AGG | + | chr4_4:71774332-71774351 | Msa0700650:CDS | 50.0% | |
| GGGAAAAGGAGAGGAGAGAA+AGG | + | chr4_4:71774341-71774360 | Msa0700650:CDS | 50.0% | |
| GAGAGAAAGGGAGAAGGAGA+GGG | + | chr4_4:71774354-71774373 | Msa0700650:CDS | 50.0% | |
| AAGGGAGAAGGAGAGGGAAA+AGG | + | chr4_4:71774360-71774379 | Msa0700650:CDS | 50.0% | |
| AGGAGAGGGAAAAGGTTAGG+AGG | + | chr4_4:71774368-71774387 | Msa0700650:CDS | 50.0% | |
| GGAAAAGGTTAGGAGGCAGA+GGG | + | chr4_4:71774375-71774394 | Msa0700650:CDS | 50.0% | |
| TGAGTGGGAAGCTATGGAGA+AGG | + | chr4_4:71774402-71774421 | Msa0700650:CDS | 50.0% | |
| !! | AGGAGGAGTTGATTCGTGAG+AGG | + | chr4_4:71774455-71774474 | Msa0700650:CDS | 50.0% |
| !! | GGAGGAGTTGATTCGTGAGA+GGG | + | chr4_4:71774456-71774475 | Msa0700650:CDS | 50.0% |
| !! | GTTGATTCGTGAGAGGGAAC+GGG | + | chr4_4:71774462-71774481 | Msa0700650:CDS | 50.0% |
| GAGAATGAATTGCAGGAGGC+TGG | + | chr4_4:71774489-71774508 | Msa0700650:CDS | 50.0% | |
| TGAATTGCAGGAGGCTGGAA+TGG | + | chr4_4:71774494-71774513 | Msa0700650:CDS | 50.0% | |
| GCACTTGTCCCATTTCTGCT+CGG | - | chr4_4:71774552-71774571 | None:intergenic | 50.0% | |
| TGCTCGGTATATTCTCGCAG+TGG | + | chr4_4:71774613-71774632 | Msa0700650:CDS | 50.0% | |
| TCATCATGTTCGCGATCCGG+TGG | + | chr4_4:71773611-71773630 | Msa0700650:intron | 55.0% | |
| GCGATCCGGTGGTTTATCCT+TGG | + | chr4_4:71773622-71773641 | Msa0700650:intron | 55.0% | |
| TAGGATTTGGGGACGGCGAT+CGG | + | chr4_4:71773885-71773904 | Msa0700650:CDS | 55.0% | |
| !! | GGGTTTCTTGGTAGTGGTGG+TGG | + | chr4_4:71773920-71773939 | Msa0700650:CDS | 55.0% |
| !! | TGGTAGTGGTGGTGGAGGAA+TGG | + | chr4_4:71773928-71773947 | Msa0700650:CDS | 55.0% |
| CTATGAGGCTGAAGATGGGG+AGG | + | chr4_4:71774054-71774073 | Msa0700650:CDS | 55.0% | |
| GAGGAAGGTTGTGAAGGGGA+TGG | + | chr4_4:71774171-71774190 | Msa0700650:CDS | 55.0% | |
| GGGGCAGTTGAGAGAAATGG+AGG | + | chr4_4:71774228-71774247 | Msa0700650:CDS | 55.0% | |
| TTGAGCAGCGCGAGATGGAA+AGG | + | chr4_4:71774257-71774276 | Msa0700650:CDS | 55.0% | |
| TGAGCAGCGCGAGATGGAAA+GGG | + | chr4_4:71774258-71774277 | Msa0700650:CDS | 55.0% | |
| GGAGAGTTTGCGAGCAGAGT+GGG | + | chr4_4:71774300-71774319 | Msa0700650:CDS | 55.0% | |
| GGAGAGGAGAGAAAGGGAGA+AGG | + | chr4_4:71774348-71774367 | Msa0700650:CDS | 55.0% | |
| GGAGAGAAAGGGAGAAGGAG+AGG | + | chr4_4:71774353-71774372 | Msa0700650:CDS | 55.0% | |
| GGGAAAAGGTTAGGAGGCAG+AGG | + | chr4_4:71774374-71774393 | Msa0700650:CDS | 55.0% | |
| GGTGTCTGAGTGGGAAGCTA+TGG | + | chr4_4:71774396-71774415 | Msa0700650:CDS | 55.0% | |
| GGAGGCTGGAATGGAAGAAG+AGG | + | chr4_4:71774503-71774522 | Msa0700650:CDS | 55.0% | |
| ATCCGATAGGCCAGCAGGTT+GGG | - | chr4_4:71774643-71774662 | None:intergenic | 55.0% | |
| GTATGATCCGATAGGCCAGC+AGG | - | chr4_4:71774648-71774667 | None:intergenic | 55.0% | |
| TCATCATGTTCGCGATCCGG+TGG | + | chr4_4:71773611-71773630 | Msa0700650:intron | 55.0% | |
| GCGATCCGGTGGTTTATCCT+TGG | + | chr4_4:71773622-71773641 | Msa0700650:intron | 55.0% | |
| TAGGATTTGGGGACGGCGAT+CGG | + | chr4_4:71773885-71773904 | Msa0700650:CDS | 55.0% | |
| !! | GGGTTTCTTGGTAGTGGTGG+TGG | + | chr4_4:71773920-71773939 | Msa0700650:CDS | 55.0% |
| !! | TGGTAGTGGTGGTGGAGGAA+TGG | + | chr4_4:71773928-71773947 | Msa0700650:CDS | 55.0% |
| CTATGAGGCTGAAGATGGGG+AGG | + | chr4_4:71774054-71774073 | Msa0700650:CDS | 55.0% | |
| GAGGAAGGTTGTGAAGGGGA+TGG | + | chr4_4:71774171-71774190 | Msa0700650:CDS | 55.0% | |
| GGGGCAGTTGAGAGAAATGG+AGG | + | chr4_4:71774228-71774247 | Msa0700650:CDS | 55.0% | |
| TTGAGCAGCGCGAGATGGAA+AGG | + | chr4_4:71774257-71774276 | Msa0700650:CDS | 55.0% | |
| TGAGCAGCGCGAGATGGAAA+GGG | + | chr4_4:71774258-71774277 | Msa0700650:CDS | 55.0% | |
| GGAGAGTTTGCGAGCAGAGT+GGG | + | chr4_4:71774300-71774319 | Msa0700650:CDS | 55.0% | |
| GGAGAGGAGAGAAAGGGAGA+AGG | + | chr4_4:71774348-71774367 | Msa0700650:CDS | 55.0% | |
| GGAGAGAAAGGGAGAAGGAG+AGG | + | chr4_4:71774353-71774372 | Msa0700650:CDS | 55.0% | |
| GGGAAAAGGTTAGGAGGCAG+AGG | + | chr4_4:71774374-71774393 | Msa0700650:CDS | 55.0% | |
| GGTGTCTGAGTGGGAAGCTA+TGG | + | chr4_4:71774396-71774415 | Msa0700650:CDS | 55.0% | |
| GGAGGCTGGAATGGAAGAAG+AGG | + | chr4_4:71774503-71774522 | Msa0700650:CDS | 55.0% | |
| ATCCGATAGGCCAGCAGGTT+GGG | - | chr4_4:71774643-71774662 | None:intergenic | 55.0% | |
| GTATGATCCGATAGGCCAGC+AGG | - | chr4_4:71774648-71774667 | None:intergenic | 55.0% | |
| ! | GTGTGTGGTTGGCTGCAGCA+CGG | + | chr4_4:71773845-71773864 | Msa0700650:intron | 60.0% |
| AGGATTTGGGGACGGCGATC+GGG | + | chr4_4:71773886-71773905 | Msa0700650:CDS | 60.0% | |
| GCGATCGGGGAGATCGAGAT+GGG | + | chr4_4:71773900-71773919 | Msa0700650:CDS | 60.0% | |
| GGTCATTCAGGGGATGGGGA+TGG | + | chr4_4:71773974-71773993 | Msa0700650:CDS | 60.0% | |
| ! | TCGGTTTGAGCAGCGCGAGA+TGG | + | chr4_4:71774252-71774271 | Msa0700650:CDS | 60.0% |
| ! | AGATGGAAAGGGAGCGCGAG+AGG | + | chr4_4:71774269-71774288 | Msa0700650:CDS | 60.0% |
| GGGAGAGTTTGCGAGCAGAG+TGG | + | chr4_4:71774299-71774318 | Msa0700650:CDS | 60.0% | |
| !! | GAGGCAGAGGGTGTCTGAGT+GGG | + | chr4_4:71774387-71774406 | Msa0700650:CDS | 60.0% |
| ! | TGCCCAACCTGCTGGCCTAT+CGG | + | chr4_4:71774638-71774657 | Msa0700650:CDS | 60.0% |
| GATCCGATAGGCCAGCAGGT+TGG | - | chr4_4:71774644-71774663 | None:intergenic | 60.0% | |
| ! | GTGTGTGGTTGGCTGCAGCA+CGG | + | chr4_4:71773845-71773864 | Msa0700650:intron | 60.0% |
| AGGATTTGGGGACGGCGATC+GGG | + | chr4_4:71773886-71773905 | Msa0700650:CDS | 60.0% | |
| GCGATCGGGGAGATCGAGAT+GGG | + | chr4_4:71773900-71773919 | Msa0700650:CDS | 60.0% | |
| GGTCATTCAGGGGATGGGGA+TGG | + | chr4_4:71773974-71773993 | Msa0700650:CDS | 60.0% | |
| ! | TCGGTTTGAGCAGCGCGAGA+TGG | + | chr4_4:71774252-71774271 | Msa0700650:CDS | 60.0% |
| ! | AGATGGAAAGGGAGCGCGAG+AGG | + | chr4_4:71774269-71774288 | Msa0700650:CDS | 60.0% |
| GGGAGAGTTTGCGAGCAGAG+TGG | + | chr4_4:71774299-71774318 | Msa0700650:CDS | 60.0% | |
| !! | GAGGCAGAGGGTGTCTGAGT+GGG | + | chr4_4:71774387-71774406 | Msa0700650:CDS | 60.0% |
| ! | TGCCCAACCTGCTGGCCTAT+CGG | + | chr4_4:71774638-71774657 | Msa0700650:CDS | 60.0% |
| GATCCGATAGGCCAGCAGGT+TGG | - | chr4_4:71774644-71774663 | None:intergenic | 60.0% | |
| ! | TGTGGTTGGCTGCAGCACGG+TGG | + | chr4_4:71773848-71773867 | Msa0700650:intron | 65.0% |
| GGATTTGGGGACGGCGATCG+GGG | + | chr4_4:71773887-71773906 | Msa0700650:CDS | 65.0% | |
| GGCGATCGGGGAGATCGAGA+TGG | + | chr4_4:71773899-71773918 | Msa0700650:CDS | 65.0% | |
| ! | AAAGGGAGCGCGAGAGGCAG+AGG | + | chr4_4:71774275-71774294 | Msa0700650:CDS | 65.0% |
| !! | GGAGGCAGAGGGTGTCTGAG+TGG | + | chr4_4:71774386-71774405 | Msa0700650:CDS | 65.0% |
| !! | CAGTGGACTGCCCAACCTGC+TGG | + | chr4_4:71774630-71774649 | Msa0700650:CDS | 65.0% |
| ! | TGTGGTTGGCTGCAGCACGG+TGG | + | chr4_4:71773848-71773867 | Msa0700650:intron | 65.0% |
| GGATTTGGGGACGGCGATCG+GGG | + | chr4_4:71773887-71773906 | Msa0700650:CDS | 65.0% | |
| GGCGATCGGGGAGATCGAGA+TGG | + | chr4_4:71773899-71773918 | Msa0700650:CDS | 65.0% | |
| ! | AAAGGGAGCGCGAGAGGCAG+AGG | + | chr4_4:71774275-71774294 | Msa0700650:CDS | 65.0% |
| !! | GGAGGCAGAGGGTGTCTGAG+TGG | + | chr4_4:71774386-71774405 | Msa0700650:CDS | 65.0% |
| !! | CAGTGGACTGCCCAACCTGC+TGG | + | chr4_4:71774630-71774649 | Msa0700650:CDS | 65.0% |
| GGAGCGCGAGAGGCAGAGGA+GGG | + | chr4_4:71774279-71774298 | Msa0700650:CDS | 70.0% | |
| GGAGCGCGAGAGGCAGAGGA+GGG | + | chr4_4:71774279-71774298 | Msa0700650:CDS | 70.0% | |
| ! | GGGAGCGCGAGAGGCAGAGG+AGG | + | chr4_4:71774278-71774297 | Msa0700650:CDS | 75.0% |
| ! | GGGAGCGCGAGAGGCAGAGG+AGG | + | chr4_4:71774278-71774297 | Msa0700650:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 71773463 | 71774735 | 71773463 | ID=Msa0700650;Name=Msa0700650 |
| chr4_4 | mRNA | 71773463 | 71774735 | 71773463 | ID=Msa0700650-mRNA-1;Parent=Msa0700650;Name=Msa0700650-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|3|0|351 |
| chr4_4 | exon | 71773463 | 71773599 | 71773463 | ID=Msa0700650-mRNA-1:exon:21843;Parent=Msa0700650-mRNA-1 |
| chr4_4 | exon | 71773714 | 71773759 | 71773714 | ID=Msa0700650-mRNA-1:exon:21844;Parent=Msa0700650-mRNA-1 |
| chr4_4 | exon | 71773863 | 71774735 | 71773863 | ID=Msa0700650-mRNA-1:exon:21845;Parent=Msa0700650-mRNA-1 |
| chr4_4 | CDS | 71773463 | 71773599 | 71773463 | ID=Msa0700650-mRNA-1:cds;Parent=Msa0700650-mRNA-1 |
| chr4_4 | CDS | 71773714 | 71773759 | 71773714 | ID=Msa0700650-mRNA-1:cds;Parent=Msa0700650-mRNA-1 |
| chr4_4 | CDS | 71773863 | 71774735 | 71773863 | ID=Msa0700650-mRNA-1:cds;Parent=Msa0700650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
