Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0687840 | XP_003607362.1 | 93.939 | 528 | 23 | 2 | 1 | 528 | 1 | 519 | 0.0 | 889 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0687840 | sp|Q9C8J7|TRO_ARATH | 56.920 | 448 | 168 | 5 | 17 | 447 | 70 | 509 | 2.07e-159 | 466 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0687840 | G7JRM6 | 93.939 | 528 | 23 | 2 | 1 | 528 | 1 | 519 | 0.0 | 889 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0687840 | 0.821128 | 4.759077e-53 | -8.615850e-47 |
| Msa0010770 | Msa0687840 | 0.803034 | 4.225398e-49 | -8.615850e-47 |
| Msa0011500 | Msa0687840 | 0.801694 | 7.980192e-49 | -8.615850e-47 |
| Msa0014710 | Msa0687840 | 0.805480 | 1.307953e-49 | -8.615850e-47 |
| Msa0022550 | Msa0687840 | 0.846647 | 1.904018e-59 | -8.615850e-47 |
| Msa0022750 | Msa0687840 | -0.801395 | 9.190183e-49 | -8.615850e-47 |
| Msa0023330 | Msa0687840 | 0.817965 | 2.508387e-52 | -8.615850e-47 |
| Msa0026430 | Msa0687840 | 0.821338 | 4.257682e-53 | -8.615850e-47 |
| Msa0026910 | Msa0687840 | 0.833030 | 6.740371e-56 | -8.615850e-47 |
| Msa0027390 | Msa0687840 | 0.810298 | 1.235880e-50 | -8.615850e-47 |
| Msa0031180 | Msa0687840 | 0.822268 | 2.593891e-53 | -8.615850e-47 |
| Msa0034350 | Msa0687840 | 0.813825 | 2.104134e-51 | -8.615850e-47 |
| Msa0037120 | Msa0687840 | 0.817199 | 3.732556e-52 | -8.615850e-47 |
| Msa0040620 | Msa0687840 | 0.804671 | 1.931162e-49 | -8.615850e-47 |
| Msa0042550 | Msa0687840 | 0.807830 | 4.173794e-50 | -8.615850e-47 |
| Msa0043500 | Msa0687840 | 0.829927 | 3.913980e-55 | -8.615850e-47 |
| Msa0043560 | Msa0687840 | 0.815253 | 1.016281e-51 | -8.615850e-47 |
| Msa0045340 | Msa0687840 | 0.814265 | 1.682199e-51 | -8.615850e-47 |
| Msa0045490 | Msa0687840 | 0.801121 | 1.045655e-48 | -8.615850e-47 |
| Msa0051630 | Msa0687840 | 0.822765 | 1.988232e-53 | -8.615850e-47 |
| Msa0051740 | Msa0687840 | 0.817014 | 4.106547e-52 | -8.615850e-47 |
| Msa0051750 | Msa0687840 | 0.802832 | 4.653377e-49 | -8.615850e-47 |
| Msa0053760 | Msa0687840 | 0.800653 | 1.302622e-48 | -8.615850e-47 |
| Msa0054820 | Msa0687840 | 0.857326 | 1.761741e-62 | -8.615850e-47 |
| Msa0056450 | Msa0687840 | 0.814239 | 1.704658e-51 | -8.615850e-47 |
| Msa0064110 | Msa0687840 | 0.810966 | 8.862535e-51 | -8.615850e-47 |
| Msa0068430 | Msa0687840 | 0.802168 | 6.376475e-49 | -8.615850e-47 |
| Msa0070370 | Msa0687840 | 0.801442 | 8.985233e-49 | -8.615850e-47 |
| Msa0074750 | Msa0687840 | 0.801386 | 9.228474e-49 | -8.615850e-47 |
| Msa0078480 | Msa0687840 | 0.817184 | 3.761881e-52 | -8.615850e-47 |
| Msa0082440 | Msa0687840 | 0.802152 | 6.424046e-49 | -8.615850e-47 |
| Msa0084340 | Msa0687840 | 0.809162 | 2.168118e-50 | -8.615850e-47 |
| Msa0088780 | Msa0687840 | 0.810291 | 1.240139e-50 | -8.615850e-47 |
| Msa0095560 | Msa0687840 | 0.802944 | 4.410438e-49 | -8.615850e-47 |
| Msa0096580 | Msa0687840 | 0.821787 | 3.353006e-53 | -8.615850e-47 |
| Msa0099620 | Msa0687840 | 0.801489 | 8.789644e-49 | -8.615850e-47 |
| Msa0099650 | Msa0687840 | 0.801646 | 8.162485e-49 | -8.615850e-47 |
| Msa0100160 | Msa0687840 | 0.843192 | 1.630210e-58 | -8.615850e-47 |
| Msa0102270 | Msa0687840 | 0.810715 | 1.004024e-50 | -8.615850e-47 |
| Msa0115560 | Msa0687840 | 0.801614 | 8.284768e-49 | -8.615850e-47 |
| Msa0116080 | Msa0687840 | 0.825035 | 5.838842e-54 | -8.615850e-47 |
| Msa0607320 | Msa0687840 | 0.806988 | 6.293771e-50 | -8.615850e-47 |
| Msa0607580 | Msa0687840 | 0.810859 | 9.348653e-51 | -8.615850e-47 |
| Msa0613090 | Msa0687840 | 0.806351 | 8.582497e-50 | -8.615850e-47 |
| Msa0618950 | Msa0687840 | 0.813314 | 2.725154e-51 | -8.615850e-47 |
| Msa0618970 | Msa0687840 | 0.815654 | 8.277505e-52 | -8.615850e-47 |
| Msa0621600 | Msa0687840 | 0.808724 | 2.690768e-50 | -8.615850e-47 |
| Msa0624470 | Msa0687840 | 0.801274 | 9.729279e-49 | -8.615850e-47 |
| Msa0626220 | Msa0687840 | 0.802219 | 6.224583e-49 | -8.615850e-47 |
| Msa0628500 | Msa0687840 | 0.805442 | 1.331987e-49 | -8.615850e-47 |
| Msa0629430 | Msa0687840 | 0.805417 | 1.348282e-49 | -8.615850e-47 |
| Msa0636020 | Msa0687840 | 0.812518 | 4.071976e-51 | -8.615850e-47 |
| Msa0637900 | Msa0687840 | 0.816332 | 5.841134e-52 | -8.615850e-47 |
| Msa0652690 | Msa0687840 | 0.819608 | 1.062399e-52 | -8.615850e-47 |
| Msa0661320 | Msa0687840 | 0.808204 | 3.474359e-50 | -8.615850e-47 |
| Msa0682550 | Msa0687840 | 0.804739 | 1.869633e-49 | -8.615850e-47 |
| Msa0685750 | Msa0687840 | 0.831039 | 2.092561e-55 | -8.615850e-47 |
| Msa0686080 | Msa0687840 | 0.806817 | 6.843248e-50 | -8.615850e-47 |
| Msa0687840 | Msa0688070 | 0.815017 | 1.146717e-51 | -8.615850e-47 |
| Msa0687840 | Msa0689760 | 0.821016 | 5.052272e-53 | -8.615850e-47 |
| Msa0687840 | Msa0693380 | 0.807867 | 4.098203e-50 | -8.615850e-47 |
| Msa0687840 | Msa0709160 | 0.809118 | 2.216526e-50 | -8.615850e-47 |
| Msa0687840 | Msa0710270 | 0.829853 | 4.078950e-55 | -8.615850e-47 |
| Msa0687840 | Msa0716860 | 0.808698 | 2.726016e-50 | -8.615850e-47 |
| Msa0687840 | Msa0717890 | 0.814199 | 1.739954e-51 | -8.615850e-47 |
| Msa0687840 | Msa0732600 | 0.808915 | 2.449350e-50 | -8.615850e-47 |
| Msa0687840 | Msa0740640 | 0.800403 | 1.464781e-48 | -8.615850e-47 |
| Msa0687840 | Msa0741070 | 0.821341 | 4.251981e-53 | -8.615850e-47 |
| Msa0687840 | Msa0744040 | 0.816907 | 4.340387e-52 | -8.615850e-47 |
| Msa0687840 | Msa0748730 | 0.800629 | 1.317733e-48 | -8.615850e-47 |
| Msa0687840 | Msa0750240 | 0.803826 | 2.896455e-49 | -8.615850e-47 |
| Msa0687840 | Msa0756530 | 0.830088 | 3.575059e-55 | -8.615850e-47 |
| Msa0687840 | Msa0756540 | 0.813660 | 2.287580e-51 | -8.615850e-47 |
| Msa0687840 | Msa0757800 | 0.817186 | 3.758203e-52 | -8.615850e-47 |
| Msa0687840 | Msa0760130 | 0.802338 | 5.883597e-49 | -8.615850e-47 |
| Msa0687840 | Msa0773590 | 0.818885 | 1.551467e-52 | -8.615850e-47 |
| Msa0687840 | Msa0797930 | 0.804688 | 1.915678e-49 | -8.615850e-47 |
| Msa0687840 | Msa0800700 | 0.811012 | 8.661646e-51 | -8.615850e-47 |
| Msa0687840 | Msa0811040 | 0.807619 | 4.626203e-50 | -8.615850e-47 |
| Msa0687840 | Msa0820200 | 0.812388 | 4.346617e-51 | -8.615850e-47 |
| Msa0687840 | Msa0821800 | 0.801412 | 9.114071e-49 | -8.615850e-47 |
| Msa0687840 | Msa0828920 | 0.806997 | 6.266799e-50 | -8.615850e-47 |
| Msa0687840 | Msa0832090 | 0.817185 | 3.759605e-52 | -8.615850e-47 |
| Msa0687840 | Msa0861090 | 0.801763 | 7.724178e-49 | -8.615850e-47 |
| Msa0687840 | Msa0863930 | 0.814517 | 1.479539e-51 | -8.615850e-47 |
| Msa0687840 | Msa0866400 | 0.815505 | 8.930298e-52 | -8.615850e-47 |
| Msa0687840 | Msa0866410 | 0.818477 | 1.920215e-52 | -8.615850e-47 |
| Msa0687840 | Msa0868160 | 0.815436 | 9.252664e-52 | -8.615850e-47 |
| Msa0687840 | Msa0873860 | 0.851569 | 8.146223e-61 | -8.615850e-47 |
| Msa0687840 | Msa0878510 | 0.806119 | 9.600448e-50 | -8.615850e-47 |
| Msa0687840 | Msa0892570 | 0.838377 | 2.981607e-57 | -8.615850e-47 |
| Msa0687840 | Msa0906690 | 0.846794 | 1.736710e-59 | -8.615850e-47 |
| Msa0687840 | Msa0908050 | 0.804176 | 2.448870e-49 | -8.615850e-47 |
| Msa0687840 | Msa0919470 | 0.816409 | 5.613080e-52 | -8.615850e-47 |
| Msa0687840 | Msa0924310 | 0.807083 | 6.010659e-50 | -8.615850e-47 |
| Msa0687840 | Msa0926470 | 0.800231 | 1.588176e-48 | -8.615850e-47 |
| Msa0687840 | Msa0932350 | 0.802696 | 4.964188e-49 | -8.615850e-47 |
| Msa0687840 | Msa0936390 | 0.819779 | 9.708920e-53 | -8.615850e-47 |
| Msa0687840 | Msa0939000 | 0.823106 | 1.656048e-53 | -8.615850e-47 |
| Msa0687840 | Msa0945240 | 0.818979 | 1.477059e-52 | -8.615850e-47 |
| Msa0687840 | Msa0969520 | 0.813705 | 2.236240e-51 | -8.615850e-47 |
| Msa0687840 | Msa0975940 | 0.831807 | 1.354114e-55 | -8.615850e-47 |
| Msa0687840 | Msa1010070 | 0.828934 | 6.822589e-55 | -8.615850e-47 |
| Msa0687840 | Msa1031820 | 0.803791 | 2.945395e-49 | -8.615850e-47 |
| Msa0687840 | Msa1032170 | 0.814937 | 1.194221e-51 | -8.615850e-47 |
| Msa0687840 | Msa1032440 | 0.814864 | 1.239537e-51 | -8.615850e-47 |
| Msa0687840 | Msa1036410 | 0.805939 | 1.047883e-49 | -8.615850e-47 |
| Msa0687840 | Msa1038080 | 0.807944 | 3.945596e-50 | -8.615850e-47 |
| Msa0687840 | Msa1051600 | 0.801524 | 8.644573e-49 | -8.615850e-47 |
| Msa0687840 | Msa1077070 | 0.807999 | 3.841097e-50 | -8.615850e-47 |
| Msa0687840 | Msa1079430 | 0.824395 | 8.262602e-54 | -8.615850e-47 |
| Msa0687840 | Msa1082500 | 0.817304 | 3.534505e-52 | -8.615850e-47 |
| Msa0687840 | Msa1087980 | 0.808034 | 3.775262e-50 | -8.615850e-47 |
| Msa0687840 | Msa1088410 | 0.803324 | 3.681313e-49 | -8.615850e-47 |
| Msa0687840 | Msa1098400 | 0.812069 | 5.103773e-51 | -8.615850e-47 |
| Msa0687840 | Msa1098890 | 0.824571 | 7.509891e-54 | -8.615850e-47 |
| Msa0687840 | Msa1118110 | 0.807686 | 4.477122e-50 | -8.615850e-47 |
| Msa0687840 | Msa1151900 | 0.811800 | 5.839783e-51 | -8.615850e-47 |
| Msa0687840 | Msa1152990 | 0.807226 | 5.605679e-50 | -8.615850e-47 |
| Msa0687840 | Msa1158310 | 0.815440 | 9.236575e-52 | -8.615850e-47 |
| Msa0687840 | Msa1165520 | 0.800694 | 1.277816e-48 | -8.615850e-47 |
| Msa0687840 | Msa1174850 | 0.830187 | 3.382034e-55 | -8.615850e-47 |
| Msa0687840 | Msa1188710 | 0.801694 | 7.980024e-49 | -8.615850e-47 |
| Msa0687840 | Msa1192990 | 0.809515 | 1.821318e-50 | -8.615850e-47 |
| Msa0687840 | Msa1193290 | 0.822229 | 2.648997e-53 | -8.615850e-47 |
| Msa0687840 | Msa1199570 | 0.837867 | 4.033604e-57 | -8.615850e-47 |
| Msa0687840 | Msa1205370 | 0.816043 | 6.775966e-52 | -8.615850e-47 |
| Msa0687840 | Msa1215070 | 0.803441 | 3.480390e-49 | -8.615850e-47 |
| Msa0687840 | Msa1221050 | 0.802411 | 5.682359e-49 | -8.615850e-47 |
| Msa0687840 | Msa1221060 | 0.813243 | 2.824500e-51 | -8.615850e-47 |
| Msa0687840 | Msa1224480 | 0.815904 | 7.278173e-52 | -8.615850e-47 |
| Msa0687840 | Msa1230040 | 0.824102 | 9.681129e-54 | -8.615850e-47 |
| Msa0687840 | Msa1250290 | 0.801373 | 9.286207e-49 | -8.615850e-47 |
| Msa0687840 | Msa1250730 | 0.803031 | 4.232749e-49 | -8.615850e-47 |
| Msa0687840 | Msa1257070 | 0.811059 | 8.461520e-51 | -8.615850e-47 |
| Msa0687840 | Msa1286550 | 0.805580 | 1.246162e-49 | -8.615850e-47 |
| Msa0687840 | Msa1287440 | 0.802749 | 4.840953e-49 | -8.615850e-47 |
| Msa0687840 | Msa1297290 | 0.809223 | 2.104393e-50 | -8.615850e-47 |
| Msa0687840 | Msa1303250 | 0.801789 | 7.630053e-49 | -8.615850e-47 |
| Msa0687840 | Msa1306840 | 0.802428 | 5.637874e-49 | -8.615850e-47 |
| Msa0687840 | Msa1306850 | 0.812337 | 4.461002e-51 | -8.615850e-47 |
| Msa0687840 | Msa1314340 | 0.808576 | 2.894294e-50 | -8.615850e-47 |
| Msa0687840 | Msa1328640 | 0.837678 | 4.511984e-57 | -8.615850e-47 |
| Msa0687840 | Msa1328710 | 0.826857 | 2.154894e-54 | -8.615850e-47 |
| Msa0687840 | Msa1329700 | 0.809266 | 2.059940e-50 | -8.615850e-47 |
| Msa0687840 | Msa1330170 | 0.805187 | 1.506464e-49 | -8.615850e-47 |
| Msa0687840 | Msa1331000 | 0.802591 | 5.216909e-49 | -8.615850e-47 |
| Msa0687840 | Msa1333680 | 0.827407 | 1.591076e-54 | -8.615850e-47 |
| Msa0687840 | Msa1333730 | 0.832355 | 9.909990e-56 | -8.615850e-47 |
| Msa0687840 | Msa1337480 | 0.803490 | 3.401012e-49 | -8.615850e-47 |
| Msa0687840 | Msa1340810 | 0.806351 | 8.579874e-50 | -8.615850e-47 |
| Msa0687840 | Msa1353470 | 0.810959 | 8.890932e-51 | -8.615850e-47 |
| Msa0687840 | Msa1359560 | 0.824387 | 8.299315e-54 | -8.615850e-47 |
| Msa0687840 | Msa1361410 | 0.809627 | 1.723452e-50 | -8.615850e-47 |
| Msa0687840 | Msa1368430 | 0.810146 | 1.332610e-50 | -8.615850e-47 |
| Msa0687840 | Msa1371640 | 0.818025 | 2.430707e-52 | -8.615850e-47 |
| Msa0687840 | Msa1372150 | 0.810827 | 9.497779e-51 | -8.615850e-47 |
| Msa0687840 | Msa1376200 | 0.800026 | 1.748212e-48 | -8.615850e-47 |
| Msa0687840 | Msa1377570 | 0.804860 | 1.763675e-49 | -8.615850e-47 |
| Msa0687840 | Msa1379850 | 0.819424 | 1.169744e-52 | -8.615850e-47 |
| Msa0687840 | Msa1385000 | 0.809731 | 1.636935e-50 | -8.615850e-47 |
| Msa0687840 | Msa1392700 | 0.831103 | 2.018332e-55 | -8.615850e-47 |
| Msa0687840 | Msa1400120 | 0.813234 | 2.837612e-51 | -8.615850e-47 |
| Msa0687840 | Msa1402270 | 0.800878 | 1.172230e-48 | -8.615850e-47 |
| Msa0687840 | Msa1407580 | 0.804934 | 1.701722e-49 | -8.615850e-47 |
| Msa0687840 | Msa1410210 | 0.805988 | 1.023235e-49 | -8.615850e-47 |
| Msa0687840 | Msa1416260 | 0.805374 | 1.376436e-49 | -8.615850e-47 |
| Msa0687840 | Msa1418260 | 0.812357 | 4.415287e-51 | -8.615850e-47 |
| Msa0687840 | Msa1420250 | 0.823101 | 1.659974e-53 | -8.615850e-47 |
| Msa0687840 | Msa1422360 | 0.803160 | 3.979986e-49 | -8.615850e-47 |
| Msa0687840 | Msa1435270 | 0.809485 | 1.848972e-50 | -8.615850e-47 |
| Msa0687840 | Msa1436480 | 0.800917 | 1.151039e-48 | -8.615850e-47 |
| Msa0687840 | Msa1438520 | 0.814356 | 1.606558e-51 | -8.615850e-47 |
| Msa0687840 | Msa1446780 | 0.816155 | 6.396158e-52 | -8.615850e-47 |
| Msa0687840 | Msa1449390 | 0.834320 | 3.208333e-56 | -8.615850e-47 |
| Msa0687840 | Msa1449520 | 0.805796 | 1.122599e-49 | -8.615850e-47 |
| Msa0687840 | Msa1450720 | 0.801970 | 7.002261e-49 | -8.615850e-47 |
| Msa0687840 | Msa1457430 | 0.809876 | 1.523121e-50 | -8.615850e-47 |
| Msa0687840 | Msa1467000 | 0.800284 | 1.549319e-48 | -8.615850e-47 |
| Msa0123300 | Msa0687840 | 0.837486 | 5.053877e-57 | -8.615850e-47 |
| Msa0126230 | Msa0687840 | 0.804120 | 2.516213e-49 | -8.615850e-47 |
| Msa0131290 | Msa0687840 | 0.808687 | 2.740413e-50 | -8.615850e-47 |
| Msa0138210 | Msa0687840 | 0.807332 | 5.323925e-50 | -8.615850e-47 |
| Msa0138520 | Msa0687840 | 0.801809 | 7.558390e-49 | -8.615850e-47 |
| Msa0143850 | Msa0687840 | 0.824729 | 6.894982e-54 | -8.615850e-47 |
| Msa0152400 | Msa0687840 | 0.810333 | 1.214417e-50 | -8.615850e-47 |
| Msa0159770 | Msa0687840 | 0.820544 | 6.485320e-53 | -8.615850e-47 |
| Msa0165300 | Msa0687840 | 0.800351 | 1.501125e-48 | -8.615850e-47 |
| Msa0167850 | Msa0687840 | 0.807490 | 4.928451e-50 | -8.615850e-47 |
| Msa0171120 | Msa0687840 | 0.806201 | 9.229725e-50 | -8.615850e-47 |
| Msa0178510 | Msa0687840 | 0.822744 | 2.010879e-53 | -8.615850e-47 |
| Msa0183050 | Msa0687840 | 0.815683 | 8.152773e-52 | -8.615850e-47 |
| Msa0183420 | Msa0687840 | 0.810671 | 1.026755e-50 | -8.615850e-47 |
| Msa0206010 | Msa0687840 | 0.800376 | 1.483939e-48 | -8.615850e-47 |
| Msa0207030 | Msa0687840 | 0.812099 | 5.026110e-51 | -8.615850e-47 |
| Msa0212990 | Msa0687840 | 0.800087 | 1.699139e-48 | -8.615850e-47 |
| Msa0218350 | Msa0687840 | 0.847261 | 1.293414e-59 | -8.615850e-47 |
| Msa0230680 | Msa0687840 | 0.816898 | 4.361513e-52 | -8.615850e-47 |
| Msa0237200 | Msa0687840 | 0.809795 | 1.586188e-50 | -8.615850e-47 |
| Msa0378970 | Msa0687840 | 0.813194 | 2.895087e-51 | -8.615850e-47 |
| Msa0387050 | Msa0687840 | 0.822421 | 2.391051e-53 | -8.615850e-47 |
| Msa0388960 | Msa0687840 | 0.800619 | 1.323590e-48 | -8.615850e-47 |
| Msa0389910 | Msa0687840 | 0.828361 | 9.380608e-55 | -8.615850e-47 |
| Msa0394690 | Msa0687840 | 0.805490 | 1.301561e-49 | -8.615850e-47 |
| Msa0398240 | Msa0687840 | 0.805586 | 1.242755e-49 | -8.615850e-47 |
| Msa0410300 | Msa0687840 | 0.802112 | 6.548866e-49 | -8.615850e-47 |
| Msa0423840 | Msa0687840 | 0.815589 | 8.554724e-52 | -8.615850e-47 |
| Msa0428580 | Msa0687840 | 0.806822 | 6.824400e-50 | -8.615850e-47 |
| Msa0430870 | Msa0687840 | 0.813579 | 2.382942e-51 | -8.615850e-47 |
| Msa0436370 | Msa0687840 | 0.819517 | 1.114242e-52 | -8.615850e-47 |
| Msa0452710 | Msa0687840 | 0.805957 | 1.038658e-49 | -8.615850e-47 |
| Msa0463060 | Msa0687840 | 0.805868 | 1.084275e-49 | -8.615850e-47 |
| Msa0468250 | Msa0687840 | 0.800796 | 1.218370e-48 | -8.615850e-47 |
| Msa0474940 | Msa0687840 | 0.805721 | 1.164386e-49 | -8.615850e-47 |
| Msa0480780 | Msa0687840 | 0.819035 | 1.435009e-52 | -8.615850e-47 |
| Msa0242430 | Msa0687840 | 0.817174 | 3.781557e-52 | -8.615850e-47 |
| Msa0243250 | Msa0687840 | 0.814213 | 1.727740e-51 | -8.615850e-47 |
| Msa0245940 | Msa0687840 | 0.829392 | 5.280748e-55 | -8.615850e-47 |
| Msa0249100 | Msa0687840 | 0.829435 | 5.155816e-55 | -8.615850e-47 |
| Msa0251270 | Msa0687840 | 0.808174 | 3.525172e-50 | -8.615850e-47 |
| Msa0254790 | Msa0687840 | 0.816390 | 5.667294e-52 | -8.615850e-47 |
| Msa0255550 | Msa0687840 | 0.805578 | 1.247680e-49 | -8.615850e-47 |
| Msa0264780 | Msa0687840 | 0.836831 | 7.429189e-57 | -8.615850e-47 |
| Msa0274970 | Msa0687840 | 0.800273 | 1.557086e-48 | -8.615850e-47 |
| Msa0276920 | Msa0687840 | 0.829906 | 3.961272e-55 | -8.615850e-47 |
| Msa0279230 | Msa0687840 | 0.802391 | 5.736704e-49 | -8.615850e-47 |
| Msa0284520 | Msa0687840 | 0.809670 | 1.686656e-50 | -8.615850e-47 |
| Msa0285330 | Msa0687840 | 0.811508 | 6.759895e-51 | -8.615850e-47 |
| Msa0287410 | Msa0687840 | 0.807936 | 3.962179e-50 | -8.615850e-47 |
| Msa0305700 | Msa0687840 | 0.817422 | 3.324707e-52 | -8.615850e-47 |
| Msa0307310 | Msa0687840 | 0.813907 | 2.017735e-51 | -8.615850e-47 |
| Msa0307860 | Msa0687840 | 0.801410 | 9.124906e-49 | -8.615850e-47 |
| Msa0315680 | Msa0687840 | 0.800621 | 1.322417e-48 | -8.615850e-47 |
| Msa0317730 | Msa0687840 | 0.811791 | 5.867494e-51 | -8.615850e-47 |
| Msa0318990 | Msa0687840 | 0.812070 | 5.100705e-51 | -8.615850e-47 |
| Msa0320800 | Msa0687840 | 0.806289 | 8.840683e-50 | -8.615850e-47 |
| Msa0324240 | Msa0687840 | 0.819152 | 1.349154e-52 | -8.615850e-47 |
| Msa0326110 | Msa0687840 | 0.806378 | 8.467851e-50 | -8.615850e-47 |
| Msa0328070 | Msa0687840 | 0.819149 | 1.351401e-52 | -8.615850e-47 |
| Msa0333920 | Msa0687840 | 0.805566 | 1.254944e-49 | -8.615850e-47 |
| Msa0347950 | Msa0687840 | 0.832741 | 7.949820e-56 | -8.615850e-47 |
| Msa0347990 | Msa0687840 | 0.824181 | 9.277724e-54 | -8.615850e-47 |
| Msa0351380 | Msa0687840 | 0.855883 | 4.679614e-62 | -8.615850e-47 |
| Msa0357020 | Msa0687840 | 0.806072 | 9.825705e-50 | -8.615850e-47 |
| Msa0358400 | Msa0687840 | 0.811924 | 5.489361e-51 | -8.615850e-47 |
| Msa0363400 | Msa0687840 | 0.801542 | 8.572927e-49 | -8.615850e-47 |
| Msa0484780 | Msa0687840 | 0.837509 | 4.985545e-57 | -8.615850e-47 |
| Msa0484840 | Msa0687840 | 0.805004 | 1.645409e-49 | -8.615850e-47 |
| Msa0486130 | Msa0687840 | 0.811766 | 5.942026e-51 | -8.615850e-47 |
| Msa0512870 | Msa0687840 | 0.803739 | 3.019269e-49 | -8.615850e-47 |
| Msa0517090 | Msa0687840 | 0.802771 | 4.789943e-49 | -8.615850e-47 |
| Msa0520700 | Msa0687840 | 0.801442 | 8.988543e-49 | -8.615850e-47 |
| Msa0527360 | Msa0687840 | 0.801003 | 1.105443e-48 | -8.615850e-47 |
| Msa0538910 | Msa0687840 | 0.808396 | 3.161295e-50 | -8.615850e-47 |
| Msa0544660 | Msa0687840 | 0.802910 | 4.483437e-49 | -8.615850e-47 |
| Msa0557320 | Msa0687840 | 0.835377 | 1.738988e-56 | -8.615850e-47 |
| Msa0559500 | Msa0687840 | 0.808129 | 3.605105e-50 | -8.615850e-47 |
| Msa0560500 | Msa0687840 | 0.815081 | 1.109684e-51 | -8.615850e-47 |
| Msa0564590 | Msa0687840 | 0.800004 | 1.765885e-48 | -8.615850e-47 |
| Msa0572420 | Msa0687840 | 0.806087 | 9.754013e-50 | -8.615850e-47 |
| Msa0574390 | Msa0687840 | 0.818126 | 2.305734e-52 | -8.615850e-47 |
| Msa0576680 | Msa0687840 | 0.844052 | 9.595583e-59 | -8.615850e-47 |
| Msa0577500 | Msa0687840 | 0.800751 | 1.244184e-48 | -8.615850e-47 |
| Msa0579200 | Msa0687840 | 0.802408 | 5.689264e-49 | -8.615850e-47 |
| Msa0588090 | Msa0687840 | 0.805158 | 1.528013e-49 | -8.615850e-47 |
| Msa0598160 | Msa0687840 | 0.818332 | 2.071805e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0687840 | MtrunA17_Chr4g0039271 | 93.939 | 528 | 23 | 2 | 1 | 528 | 1 | 519 | 0.0 | 889 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0687840 | AT1G51450.1 | 56.920 | 448 | 168 | 5 | 17 | 447 | 70 | 509 | 2.10e-160 | 466 |
Find 163 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAATTTGGTTTGGTATAA+AGG | 0.175383 | 4_4:-52824605 | Msa0687840:CDS |
| TTTGAAAATCAAGTTGAAAA+TGG | 0.186697 | 4_4:-52821674 | Msa0687840:CDS |
| GAAGTGTATCCATGGAAATT+AGG | 0.190715 | 4_4:+52825614 | None:intergenic |
| TGCACAGTTAAGTTCAATTT+TGG | 0.226186 | 4_4:-52821776 | Msa0687840:CDS |
| AAGAAATCTTAAGTGTAATA+TGG | 0.246510 | 4_4:-52821395 | Msa0687840:exon |
| TTAACCTCCGGCAACGAAAT+TGG | 0.268536 | 4_4:+52825247 | None:intergenic |
| TATGGTGAAGGTGATGTTAT+TGG | 0.268837 | 4_4:-52824674 | Msa0687840:CDS |
| AGATAAAGGTAGTGAGGTTA+GGG | 0.291160 | 4_4:-52824844 | Msa0687840:CDS |
| GAGATAAAGGTAGTGAGGTT+AGG | 0.301462 | 4_4:-52824845 | Msa0687840:CDS |
| AAGGCTTTGAGGGAGAATTA+TGG | 0.304820 | 4_4:-52824707 | Msa0687840:CDS |
| TCAACCATTGGCTTGGGAAT+TGG | 0.306015 | 4_4:+52821713 | None:intergenic |
| GGGTATGATGGGAATAGTTT+TGG | 0.326000 | 4_4:-52824761 | Msa0687840:CDS |
| TTGTGACTTTAAAATAGATA+TGG | 0.329866 | 4_4:+52821134 | None:intergenic |
| AAGTGTATCCATGGAAATTA+GGG | 0.338418 | 4_4:+52825615 | None:intergenic |
| TTGAAAATCAAGTTGAAAAT+GGG | 0.342475 | 4_4:-52821673 | Msa0687840:CDS |
| ATGGTGAAGGTGATGTTATT+GGG | 0.345667 | 4_4:-52824673 | Msa0687840:CDS |
| GGTGGATCTTCCTTAGCATC+TGG | 0.361382 | 4_4:+52824563 | None:intergenic |
| GGAAGAACCAATTTCGTTGC+CGG | 0.373865 | 4_4:-52825254 | Msa0687840:CDS |
| GTTCGTGTGGTTGTTATTGT+TGG | 0.379535 | 4_4:+52825072 | None:intergenic |
| AGGCTTTGAGGGAGAATTAT+GGG | 0.380543 | 4_4:-52824706 | Msa0687840:CDS |
| AATGGAGAAGGGTGATTTGC+AGG | 0.380670 | 4_4:-52824792 | Msa0687840:CDS |
| GAAAGTTGCTTCTGCTTCTT+CGG | 0.383566 | 4_4:+52825295 | None:intergenic |
| TGTCTCCACCGTGGTTGATA+TGG | 0.383829 | 4_4:-52825476 | Msa0687840:CDS |
| CAGGCACCAGTTGGGTATGA+TGG | 0.386637 | 4_4:-52824773 | Msa0687840:CDS |
| TCCCTCCAACGACGGAAAAT+CGG | 0.387502 | 4_4:-52825419 | Msa0687840:CDS |
| TGCTGCTGCTGTGTCAATTC+CGG | 0.399734 | 4_4:-52825218 | Msa0687840:CDS |
| GACTAACCAGGTACAACTTT+AGG | 0.400387 | 4_4:+52824542 | None:intergenic |
| AGGTGGTTCGGCGGAGGGTG+CGG | 0.402714 | 4_4:+52825525 | None:intergenic |
| CAAAAGGGTATAGAATGGTT+AGG | 0.407504 | 4_4:-52824904 | Msa0687840:CDS |
| GGAAGCAGGTGGTTCGGCGG+AGG | 0.415371 | 4_4:+52825519 | None:intergenic |
| TTTACAAATGACTAGGTTAG+TGG | 0.418051 | 4_4:-52821284 | Msa0687840:three_prime_UTR |
| AATTATGGGGATGAGGGTTA+TGG | 0.418179 | 4_4:-52824692 | Msa0687840:CDS |
| TTGAATGAGAGTAAATCAAA+TGG | 0.425174 | 4_4:-52821620 | Msa0687840:CDS |
| GGTTCTTCTTCATCTTCATC+AGG | 0.425618 | 4_4:+52825322 | None:intergenic |
| TTCTTAATATTATTAAATCC+AGG | 0.428347 | 4_4:-52821239 | Msa0687840:three_prime_UTR |
| GGTGGAGGAAGCAGGTGGTT+CGG | 0.429695 | 4_4:+52825513 | None:intergenic |
| TGCTTCTGCTTCTTCGGAAG+CGG | 0.430953 | 4_4:+52825301 | None:intergenic |
| TTCGCCGGTGTGGTTGTAAC+CGG | 0.433338 | 4_4:+52825199 | None:intergenic |
| GGTTCGACGGTGGAGGAAGC+AGG | 0.436928 | 4_4:+52825505 | None:intergenic |
| TTGACTGAGAAGAAATCTAA+TGG | 0.437022 | 4_4:-52821647 | Msa0687840:CDS |
| CGAAGAGGAAGATGAAGAAA+TGG | 0.437298 | 4_4:-52825575 | Msa0687840:CDS |
| GAAATTGGTTCTTCCTTGAC+AGG | 0.440351 | 4_4:+52825262 | None:intergenic |
| AGGGAGAATTATGGGGATGA+GGG | 0.442350 | 4_4:-52824698 | Msa0687840:CDS |
| TTCCTCTTCGTCTTTGTATG+TGG | 0.447669 | 4_4:+52825588 | None:intergenic |
| TTAAGTGCAGGGAGCACAAA+AGG | 0.448508 | 4_4:-52824920 | Msa0687840:CDS |
| AGAAATCTTAAGTGTAATAT+GGG | 0.448591 | 4_4:-52821394 | Msa0687840:exon |
| GTAAGATTCATAAGGCTTTG+AGG | 0.449334 | 4_4:-52824718 | Msa0687840:CDS |
| AGTGAGGATAGGTTAAGTGC+AGG | 0.449423 | 4_4:-52824932 | Msa0687840:CDS |
| TTTGGATATAGGGATATTGA+TGG | 0.451263 | 4_4:-52824743 | Msa0687840:CDS |
| TAAGATTCATAAGGCTTTGA+GGG | 0.456790 | 4_4:-52824717 | Msa0687840:CDS |
| GTTGTTGTTGTGACGGTTGA+AGG | 0.457335 | 4_4:+52825547 | None:intergenic |
| GAGAGTGGACATACGCGGTT+GGG | 0.457544 | 4_4:-52824821 | Msa0687840:CDS |
| AAAATATCCAAAAGGTGAAA+AGG | 0.459114 | 4_4:+52821159 | None:intergenic |
| GTAGCTTTCAAAGACCTCTA+TGG | 0.460094 | 4_4:-52821851 | Msa0687840:CDS |
| GGAACTTCAACCATTGGCTT+GGG | 0.460214 | 4_4:+52821707 | None:intergenic |
| TAGGGCAACAAGAGGGGTAG+TGG | 0.460385 | 4_4:-52824885 | Msa0687840:CDS |
| GTAGTGAGGTTAGGGGAGAG+TGG | 0.460406 | 4_4:-52824836 | Msa0687840:CDS |
| AGGAACTTCAACCATTGGCT+TGG | 0.462086 | 4_4:+52821706 | None:intergenic |
| AAGTTGAGTTGAGTGAGGAT+AGG | 0.463307 | 4_4:-52824943 | Msa0687840:CDS |
| TTTCGGTGAATTCTTCTGTT+CGG | 0.464189 | 4_4:+52825360 | None:intergenic |
| TCGACTGAGAAGAAATCAAA+TGG | 0.469958 | 4_4:-52821539 | Msa0687840:CDS |
| ATGGTTGAAGTTCCTCATCA+TGG | 0.472322 | 4_4:-52821698 | Msa0687840:CDS |
| ACTCTTCCTTCTTCTCTCAT+CGG | 0.476839 | 4_4:-52825684 | Msa0687840:five_prime_UTR |
| TGATGGGAGTAAGATTCATA+AGG | 0.484252 | 4_4:-52824726 | Msa0687840:CDS |
| TTGACTGTGAAGAAATCAAC+AGG | 0.484975 | 4_4:-52821593 | Msa0687840:CDS |
| GATAAACATATCTTCATCTC+CGG | 0.486302 | 4_4:+52824986 | None:intergenic |
| GGAGCAAACTTATCTCCATC+AGG | 0.486308 | 4_4:+52824635 | None:intergenic |
| TCGACTGAGAAGAAATCAAA+TGG | 0.487352 | 4_4:-52821566 | Msa0687840:CDS |
| GAGGGAGAATTATGGGGATG+AGG | 0.488008 | 4_4:-52824699 | Msa0687840:CDS |
| GAAGCAGGTGGTTCGGCGGA+GGG | 0.494154 | 4_4:+52825520 | None:intergenic |
| TTAGTGGTGTAAACTTATGA+AGG | 0.496774 | 4_4:-52821268 | Msa0687840:three_prime_UTR |
| GTCGTCGCTGTTCCATTCGC+CGG | 0.498211 | 4_4:+52825184 | None:intergenic |
| TTGTCAGGAAACCTCTGTAC+TGG | 0.500278 | 4_4:+52825022 | None:intergenic |
| TGAGAAGAAATCAGATGAAG+AGG | 0.505178 | 4_4:-52821426 | Msa0687840:CDS |
| CTATTCCCATCATACCCAAC+TGG | 0.505256 | 4_4:+52824767 | None:intergenic |
| TCTTAATATTATTAAATCCA+GGG | 0.508986 | 4_4:-52821238 | Msa0687840:three_prime_UTR |
| TGCTTATAATCCAGATGCTA+AGG | 0.510784 | 4_4:-52824573 | Msa0687840:CDS |
| CTTCTGTTCGGCAGAGTCGT+CGG | 0.512067 | 4_4:+52825372 | None:intergenic |
| AAAAGGGTATAGAATGGTTA+GGG | 0.519863 | 4_4:-52824903 | Msa0687840:CDS |
| AGCGGGTGGTTCGACGGTGG+AGG | 0.521228 | 4_4:+52825498 | None:intergenic |
| GGGAAATTCTTATATTTCAG+AGG | 0.527357 | 4_4:-52821217 | Msa0687840:three_prime_UTR |
| GGTGATTTGCAGGCACCAGT+TGG | 0.528516 | 4_4:-52824782 | Msa0687840:CDS |
| ATCAACCACGGTGGAGACAG+CGG | 0.529152 | 4_4:+52825480 | None:intergenic |
| GCGATTCCGATGAGAGAAGA+AGG | 0.530328 | 4_4:+52825678 | None:intergenic |
| AGAGTATACATTGAAGCAGC+AGG | 0.532295 | 4_4:+52821815 | None:intergenic |
| TCCCTCATGATTTCAATGAA+CGG | 0.533971 | 4_4:-52821736 | Msa0687840:CDS |
| GGGGATGAGGGTTATGGTGA+AGG | 0.534213 | 4_4:-52824686 | Msa0687840:CDS |
| AACAATAACAACCACACGAA+CGG | 0.535403 | 4_4:-52825070 | Msa0687840:CDS |
| TGATGAGGAACTTCAACCAT+TGG | 0.535810 | 4_4:+52821701 | None:intergenic |
| GGCTTTGAGGGAGAATTATG+GGG | 0.538168 | 4_4:-52824705 | Msa0687840:CDS |
| AGAGTCGTCGGAGGGTTCAT+CGG | 0.539004 | 4_4:+52825384 | None:intergenic |
| GTGATTTGCAGGCACCAGTT+GGG | 0.540685 | 4_4:-52824781 | Msa0687840:CDS |
| GGAGACAGCGGGTGGTTCGA+CGG | 0.541479 | 4_4:+52825492 | None:intergenic |
| GAGGGGTAGTGGAAGGTGCT+TGG | 0.542182 | 4_4:-52824874 | Msa0687840:CDS |
| GGAGAGTGGACATACGCGGT+TGG | 0.542977 | 4_4:-52824822 | Msa0687840:CDS |
| CTTAATATTATTAAATCCAG+GGG | 0.543097 | 4_4:-52821237 | Msa0687840:three_prime_UTR |
| GTTGGGTTGGACAATGGAGA+AGG | 0.544198 | 4_4:-52824804 | Msa0687840:CDS |
| CGCTGTTCCATTCGCCGGTG+TGG | 0.544512 | 4_4:+52825189 | None:intergenic |
| GTTACAACCACACCGGCGAA+TGG | 0.549575 | 4_4:-52825196 | Msa0687840:CDS |
| TTGGATATAGGGATATTGAT+GGG | 0.550063 | 4_4:-52824742 | Msa0687840:CDS |
| GAATGGTTAGGGCAACAAGA+GGG | 0.550128 | 4_4:-52824892 | Msa0687840:CDS |
| TGAAATATAAGAATTTCCCC+TGG | 0.557442 | 4_4:+52821221 | None:intergenic |
| GGCCGTTCATTGAAATCATG+AGG | 0.557836 | 4_4:+52821734 | None:intergenic |
| TAGTGGTGTAAACTTATGAA+GGG | 0.558024 | 4_4:-52821267 | Msa0687840:three_prime_UTR |
| TGAAAATCAAGTTGAAAATG+GGG | 0.558856 | 4_4:-52821672 | Msa0687840:CDS |
| GAAATCAGATGAAGAGGCGA+AGG | 0.561598 | 4_4:-52821474 | Msa0687840:CDS |
| AGGCACCAGTTGGGTATGAT+GGG | 0.561997 | 4_4:-52824772 | Msa0687840:CDS |
| GCAGCAGCATTGTTAACCTC+CGG | 0.563639 | 4_4:+52825235 | None:intergenic |
| ACCACCACTCCCTCCAACGA+CGG | 0.564951 | 4_4:-52825427 | Msa0687840:CDS |
| TCAACCACGGTGGAGACAGC+GGG | 0.567122 | 4_4:+52825481 | None:intergenic |
| GTGGACATACGCGGTTGGGT+TGG | 0.569468 | 4_4:-52824817 | Msa0687840:CDS |
| AAATTGATTTACAAATGACT+AGG | 0.571172 | 4_4:-52821291 | Msa0687840:three_prime_UTR |
| ACTCAAAACCCTAATTTCCA+TGG | 0.572184 | 4_4:-52825623 | Msa0687840:exon |
| TGTTCGGCAGAGTCGTCGGA+GGG | 0.573277 | 4_4:+52825376 | None:intergenic |
| TGTCTTCTCCACCGTTCGTG+TGG | 0.575419 | 4_4:+52825059 | None:intergenic |
| GCAACAAGAGGGGTAGTGGA+AGG | 0.575466 | 4_4:-52824881 | Msa0687840:CDS |
| GGAGATGAAATCAGATGAAG+AGG | 0.575677 | 4_4:-52821480 | Msa0687840:CDS |
| TTCCTCTCTGAACCCTGTCA+AGG | 0.578436 | 4_4:-52825275 | Msa0687840:CDS |
| GAGCACAAAAGGGTATAGAA+TGG | 0.579497 | 4_4:-52824909 | Msa0687840:CDS |
| TCCGTCGTTGGAGGGAGTGG+TGG | 0.584744 | 4_4:+52825426 | None:intergenic |
| CTGTTCGGCAGAGTCGTCGG+AGG | 0.586497 | 4_4:+52825375 | None:intergenic |
| GGAGAAAGTTGAGTTGAGTG+AGG | 0.590150 | 4_4:-52824948 | Msa0687840:CDS |
| GGGTGCGGTTGTTGTTGTGA+CGG | 0.590325 | 4_4:+52825540 | None:intergenic |
| GAGATTCAATCTGAAAAGAG+AGG | 0.592772 | 4_4:+52825655 | None:intergenic |
| AAAATCAAATGGAGAGTCGA+AGG | 0.593858 | 4_4:-52821501 | Msa0687840:CDS |
| TACGCGGTTGGGTTGGACAA+TGG | 0.595028 | 4_4:-52824810 | Msa0687840:CDS |
| TAAGTGCAGGGAGCACAAAA+GGG | 0.599357 | 4_4:-52824919 | Msa0687840:CDS |
| TCGTCGGAGGGTTCATCGGA+GGG | 0.603476 | 4_4:+52825388 | None:intergenic |
| TGTGGCTTGAAGTGTATCCA+TGG | 0.604461 | 4_4:+52825606 | None:intergenic |
| TAACCAGGTACAACTTTAGG+TGG | 0.604839 | 4_4:+52824545 | None:intergenic |
| GACAGCGGGTGGTTCGACGG+TGG | 0.608842 | 4_4:+52825495 | None:intergenic |
| GTGAGGATAGGTTAAGTGCA+GGG | 0.610539 | 4_4:-52824931 | Msa0687840:CDS |
| GTCGTCGGAGGGTTCATCGG+AGG | 0.615642 | 4_4:+52825387 | None:intergenic |
| AGTGGTGTAAACTTATGAAG+GGG | 0.618642 | 4_4:-52821266 | Msa0687840:three_prime_UTR |
| GATCCACCTAAAGTTGTACC+TGG | 0.623881 | 4_4:-52824548 | Msa0687840:intron |
| AGATTCAATCTGAAAAGAGA+GGG | 0.625169 | 4_4:+52825656 | None:intergenic |
| TTGGGTTGGACAATGGAGAA+GGG | 0.625725 | 4_4:-52824803 | Msa0687840:CDS |
| AAATTGGTTCTTCCTTGACA+GGG | 0.631947 | 4_4:+52825263 | None:intergenic |
| GCCGTTCATTGAAATCATGA+GGG | 0.633774 | 4_4:+52821735 | None:intergenic |
| GATAAAGGTAGTGAGGTTAG+GGG | 0.636348 | 4_4:-52824843 | Msa0687840:CDS |
| GGAGGAAGCAGGTGGTTCGG+CGG | 0.637457 | 4_4:+52825516 | None:intergenic |
| AATGGTTAGGGCAACAAGAG+GGG | 0.638305 | 4_4:-52824891 | Msa0687840:CDS |
| ACGGCCAATTCCCAAGCCAA+TGG | 0.642692 | 4_4:-52821717 | Msa0687840:CDS |
| AGAACCAATTTCGTTGCCGG+AGG | 0.644292 | 4_4:-52825251 | Msa0687840:CDS |
| TTTATCGAAAGTTTACAAAG+CGG | 0.645394 | 4_4:-52824969 | Msa0687840:CDS |
| GATAGTAACGACCGCCATAG+AGG | 0.646862 | 4_4:+52821837 | None:intergenic |
| TGACAAAAGTGACGATACAC+CGG | 0.648124 | 4_4:-52825005 | Msa0687840:CDS |
| AGCCACATACAAAGACGAAG+AGG | 0.649729 | 4_4:-52825590 | Msa0687840:CDS |
| AATAACAACCACACGAACGG+TGG | 0.652994 | 4_4:-52825067 | Msa0687840:CDS |
| TCGACGGTGGAGGAAGCAGG+TGG | 0.654043 | 4_4:+52825508 | None:intergenic |
| TTCTGATAACACCAGTACAG+AGG | 0.656427 | 4_4:-52825033 | Msa0687840:CDS |
| TGGTTTGGTATAAAGGACAA+CGG | 0.659021 | 4_4:-52824598 | Msa0687840:CDS |
| ACCACGGTGGAGACAGCGGG+TGG | 0.665511 | 4_4:+52825484 | None:intergenic |
| AGAATGGTTAGGGCAACAAG+AGG | 0.674035 | 4_4:-52824893 | Msa0687840:CDS |
| CTGTGAAGAAATCAACAGGA+GGG | 0.678760 | 4_4:-52821589 | Msa0687840:CDS |
| TTCCTTGACAGGGTTCAGAG+AGG | 0.691426 | 4_4:+52825273 | None:intergenic |
| ACTGTGAAGAAATCAACAGG+AGG | 0.695835 | 4_4:-52821590 | Msa0687840:CDS |
| GCTTTCAAAGACCTCTATGG+CGG | 0.700991 | 4_4:-52821848 | Msa0687840:CDS |
| TAGGGGAGAGTGGACATACG+CGG | 0.710781 | 4_4:-52824826 | Msa0687840:CDS |
| TGATATGGAATTAAAAGACG+CGG | 0.713277 | 4_4:-52825461 | Msa0687840:CDS |
| TAATTCCATATCAACCACGG+TGG | 0.713477 | 4_4:+52825471 | None:intergenic |
| ACCACCCGCTGTCTCCACCG+TGG | 0.719787 | 4_4:-52825485 | Msa0687840:CDS |
| AATTCCGGTTACAACCACAC+CGG | 0.762987 | 4_4:-52825203 | Msa0687840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATACCTTTTTATATATTAT+CGG | + | chr4_4:52822959-52822978 | None:intergenic | 10.0% |
| !! | TCATAAATTCATAATATATA+GGG | - | chr4_4:52824571-52824590 | Msa0687840:CDS | 10.0% |
| !!! | AATTTTGAACATTATTGATA+GGG | - | chr4_4:52822377-52822396 | Msa0687840:intron | 15.0% |
| !! | TTGTAAATATATTAAACATG+AGG | + | chr4_4:52822893-52822912 | None:intergenic | 15.0% |
| !! | TATTATCAACAGATATAATA+TGG | + | chr4_4:52822993-52823012 | None:intergenic | 15.0% |
| !! | ATTATGAATTTATGACTAAT+GGG | + | chr4_4:52824566-52824585 | None:intergenic | 15.0% |
| !! | TATTATGAATTTATGACTAA+TGG | + | chr4_4:52824567-52824586 | None:intergenic | 15.0% |
| !! | GTCATAAATTCATAATATAT+AGG | - | chr4_4:52824570-52824589 | Msa0687840:CDS | 15.0% |
| !! | TTCTTAATATTATTAAATCC+AGG | - | chr4_4:52825597-52825616 | Msa0687840:CDS | 15.0% |
| !! | TCTTAATATTATTAAATCCA+GGG | - | chr4_4:52825598-52825617 | Msa0687840:CDS | 15.0% |
| !! | AGAAAAAGAATAACAATGTA+TGG | - | chr4_4:52821686-52821705 | Msa0687840:CDS | 20.0% |
| !! | GAAAAAGAATAACAATGTAT+GGG | - | chr4_4:52821687-52821706 | Msa0687840:CDS | 20.0% |
| !! | AAAAACAAAAACAACAACAA+CGG | - | chr4_4:52821736-52821755 | Msa0687840:CDS | 20.0% |
| !!! | TTTTATATTAATTTGCCTGA+TGG | - | chr4_4:52822186-52822205 | Msa0687840:intron | 20.0% |
| !!! | GAATTTTGAACATTATTGAT+AGG | - | chr4_4:52822376-52822395 | Msa0687840:intron | 20.0% |
| !!! | TTTTCTAGTTTATTATCTCA+TGG | - | chr4_4:52822480-52822499 | Msa0687840:intron | 20.0% |
| !! | AAATCGATAGTTCATTATTT+AGG | - | chr4_4:52822505-52822524 | Msa0687840:intron | 20.0% |
| !! | AATCGATAGTTCATTATTTA+GGG | - | chr4_4:52822506-52822525 | Msa0687840:intron | 20.0% |
| !! | AAAAAACATGAAAAAGTAAC+TGG | + | chr4_4:52822755-52822774 | None:intergenic | 20.0% |
| !! | AAAAAATGTGAAAAAGTAAC+TGG | + | chr4_4:52822822-52822841 | None:intergenic | 20.0% |
| !! | TTCACCGATAATATATAAAA+AGG | - | chr4_4:52822952-52822971 | Msa0687840:intron | 20.0% |
| !! | ATATTCAGATATTCAGATTA+AGG | + | chr4_4:52824459-52824478 | None:intergenic | 20.0% |
| !! | AATATCTGAATATTCACTAT+TGG | - | chr4_4:52824466-52824485 | Msa0687840:intron | 20.0% |
| !! | ATTAGATACACAACTTAATT+GGG | - | chr4_4:52824597-52824616 | Msa0687840:CDS | 20.0% |
| !!! | TTTGAAAATCAAGTTGAAAA+TGG | - | chr4_4:52825162-52825181 | Msa0687840:CDS | 20.0% |
| !!! | TTGAAAATCAAGTTGAAAAT+GGG | - | chr4_4:52825163-52825182 | Msa0687840:CDS | 20.0% |
| !! | AAGAAATCTTAAGTGTAATA+TGG | - | chr4_4:52825441-52825460 | Msa0687840:CDS | 20.0% |
| !! | AGAAATCTTAAGTGTAATAT+GGG | - | chr4_4:52825442-52825461 | Msa0687840:CDS | 20.0% |
| !!! | AAATTGATTTACAAATGACT+AGG | - | chr4_4:52825545-52825564 | Msa0687840:CDS | 20.0% |
| !! | CTTAATATTATTAAATCCAG+GGG | - | chr4_4:52825599-52825618 | Msa0687840:CDS | 20.0% |
| !!! | AAGATATTTTGTAGTTTGTT+TGG | - | chr4_4:52825648-52825667 | Msa0687840:five_prime_UTR | 20.0% |
| !!! | AGATATTTTGTAGTTTGTTT+GGG | - | chr4_4:52825649-52825668 | Msa0687840:five_prime_UTR | 20.0% |
| !!! | TTTTAATTCCATATCAACCA+CGG | + | chr4_4:52821371-52821390 | None:intergenic | 25.0% |
| ! | TTTATCGAAAGTTTACAAAG+CGG | - | chr4_4:52821867-52821886 | Msa0687840:CDS | 25.0% |
| !! | CAAACCAAATTCTGATTTTT+CGG | + | chr4_4:52822225-52822244 | None:intergenic | 25.0% |
| !!! | CTGTTTTATGTTTTTGATGT+TGG | - | chr4_4:52822354-52822373 | Msa0687840:intron | 25.0% |
| !! | ACAGTTTGATAATAATCACA+AGG | + | chr4_4:52822424-52822443 | None:intergenic | 25.0% |
| ! | ATCGATAGTTCATTATTTAG+GGG | - | chr4_4:52822507-52822526 | Msa0687840:intron | 25.0% |
| ! | TAAAATTTAGACACGCTTAA+GGG | + | chr4_4:52822601-52822620 | None:intergenic | 25.0% |
| ! | ATAAAATTTAGACACGCTTA+AGG | + | chr4_4:52822602-52822621 | None:intergenic | 25.0% |
| !!! | TAATAACCGTTTTTTGTGAA+AGG | - | chr4_4:52823008-52823027 | Msa0687840:intron | 25.0% |
| !!! | TGGTAAGGTTTATTTTTTGT+GGG | + | chr4_4:52823105-52823124 | None:intergenic | 25.0% |
| ! | CCTAGATGCATTAATATAAT+AGG | + | chr4_4:52823400-52823419 | None:intergenic | 25.0% |
| ! | CCTATTATATTAATGCATCT+AGG | - | chr4_4:52823397-52823416 | Msa0687840:intron | 25.0% |
| ! | ACAGATACATTATACAATAG+AGG | + | chr4_4:52823468-52823487 | None:intergenic | 25.0% |
| ! | AAAGTTTATTTGTATTCTGC+CGG | + | chr4_4:52823550-52823569 | None:intergenic | 25.0% |
| ! | CTCAGATGATGTTTATTTAT+GGG | + | chr4_4:52823701-52823720 | None:intergenic | 25.0% |
| ! | TCTCAGATGATGTTTATTTA+TGG | + | chr4_4:52823702-52823721 | None:intergenic | 25.0% |
| !! | TGAAGAAATAGAAAACCTTT+TGG | + | chr4_4:52823893-52823912 | None:intergenic | 25.0% |
| ! | AAAACATATTTAGCAAGACT+GGG | - | chr4_4:52823912-52823931 | Msa0687840:intron | 25.0% |
| ! | ATGCTCTTAAGTATATTGAT+TGG | - | chr4_4:52824099-52824118 | Msa0687840:intron | 25.0% |
| ! | TTGATCTAGATTTGATTCTA+TGG | - | chr4_4:52824247-52824266 | Msa0687840:intron | 25.0% |
| ! | TGATCTAGATTTGATTCTAT+GGG | - | chr4_4:52824248-52824267 | Msa0687840:intron | 25.0% |
| !!! | ACATTTCTATCTTAGTCTTA+GGG | - | chr4_4:52824284-52824303 | Msa0687840:intron | 25.0% |
| ! | AATATTCACTATTGGAAGTT+AGG | - | chr4_4:52824474-52824493 | Msa0687840:intron | 25.0% |
| ! | CATTAGATACACAACTTAAT+TGG | - | chr4_4:52824596-52824615 | Msa0687840:CDS | 25.0% |
| ! | AAAACAAGTTAAGCAACTTA+CGG | + | chr4_4:52824708-52824727 | None:intergenic | 25.0% |
| !!! | TTGCTTAACTTGTTTTAGAA+AGG | - | chr4_4:52824712-52824731 | Msa0687840:CDS | 25.0% |
| !!! | TGTAAGTTGTATTTTGAGTA+TGG | - | chr4_4:52824878-52824897 | Msa0687840:CDS | 25.0% |
| ! | GTATGGAATGAAAATTCAAT+TGG | - | chr4_4:52824895-52824914 | Msa0687840:CDS | 25.0% |
| ! | GAGATATCTTTCTTCAAAAA+TGG | - | chr4_4:52824949-52824968 | Msa0687840:CDS | 25.0% |
| !!! | TGAAAATCAAGTTGAAAATG+GGG | - | chr4_4:52825164-52825183 | Msa0687840:CDS | 25.0% |
| ! | TTGAATGAGAGTAAATCAAA+TGG | - | chr4_4:52825216-52825235 | Msa0687840:CDS | 25.0% |
| ! | AAAATATCCAAAAGGTGAAA+AGG | + | chr4_4:52825680-52825699 | None:intergenic | 25.0% |
| ! | ATATGGCAAAAATATCCAAA+AGG | + | chr4_4:52825688-52825707 | None:intergenic | 25.0% |
| AGATTCAATCTGAAAAGAGA+GGG | + | chr4_4:52821183-52821202 | None:intergenic | 30.0% | |
| AAGTGTATCCATGGAAATTA+GGG | + | chr4_4:52821224-52821243 | None:intergenic | 30.0% | |
| TGATATGGAATTAAAAGACG+CGG | - | chr4_4:52821375-52821394 | Msa0687840:three_prime_UTR | 30.0% | |
| GATAAACATATCTTCATCTC+CGG | + | chr4_4:52821853-52821872 | None:intergenic | 30.0% | |
| ! | AAAAGGGTATAGAATGGTTA+GGG | - | chr4_4:52821933-52821952 | Msa0687840:intron | 30.0% |
| !!! | TGCTTGGTATTTTGAGATAA+AGG | - | chr4_4:52821978-52821997 | Msa0687840:intron | 30.0% |
| !!! | ATTTTGAGATAAAGGTAGTG+AGG | - | chr4_4:52821986-52822005 | Msa0687840:intron | 30.0% |
| !!! | ATGGGAATAGTTTTGGATAT+AGG | - | chr4_4:52822082-52822101 | Msa0687840:intron | 30.0% |
| !!! | TGGGAATAGTTTTGGATATA+GGG | - | chr4_4:52822083-52822102 | Msa0687840:intron | 30.0% |
| TTTGGATATAGGGATATTGA+TGG | - | chr4_4:52822093-52822112 | Msa0687840:intron | 30.0% | |
| TTGGATATAGGGATATTGAT+GGG | - | chr4_4:52822094-52822113 | Msa0687840:intron | 30.0% | |
| ! | TAAGATTCATAAGGCTTTGA+GGG | - | chr4_4:52822119-52822138 | Msa0687840:intron | 30.0% |
| CGAAAAATCAGAATTTGGTT+TGG | - | chr4_4:52822223-52822242 | Msa0687840:intron | 30.0% | |
| !! | CAGAATTTGGTTTGGTATAA+AGG | - | chr4_4:52822231-52822250 | Msa0687840:intron | 30.0% |
| ATAGTTCATTATTTAGGGGT+GGG | - | chr4_4:52822511-52822530 | Msa0687840:intron | 30.0% | |
| ACGTATATATGGACTTCATA+GGG | + | chr4_4:52822636-52822655 | None:intergenic | 30.0% | |
| TACGTATATATGGACTTCAT+AGG | + | chr4_4:52822637-52822656 | None:intergenic | 30.0% | |
| TTCCAACTCTTACGTATATA+TGG | + | chr4_4:52822647-52822666 | None:intergenic | 30.0% | |
| ! | GTAACTGGATATTTTCTAGA+TGG | + | chr4_4:52822807-52822826 | None:intergenic | 30.0% |
| ATTAAACATGAGGTGTATCT+CGG | + | chr4_4:52822883-52822902 | None:intergenic | 30.0% | |
| ATATATTATCGGTGAAGAAC+AGG | + | chr4_4:52822948-52822967 | None:intergenic | 30.0% | |
| !!! | GTAAGGTTTATTTTTTGTGG+GGG | + | chr4_4:52823103-52823122 | None:intergenic | 30.0% |
| !!! | GGTAAGGTTTATTTTTTGTG+GGG | + | chr4_4:52823104-52823123 | None:intergenic | 30.0% |
| !!! | GTGGTAAGGTTTATTTTTTG+TGG | + | chr4_4:52823106-52823125 | None:intergenic | 30.0% |
| AACTTCAGAAAAACAAGAGA+TGG | + | chr4_4:52823428-52823447 | None:intergenic | 30.0% | |
| ! | AGTATGGATTTTTCTTCTGA+TGG | + | chr4_4:52823520-52823539 | None:intergenic | 30.0% |
| AGAAGAAAAATCCATACTGT+TGG | - | chr4_4:52823522-52823541 | Msa0687840:intron | 30.0% | |
| GAAGAAAAATCCATACTGTT+GGG | - | chr4_4:52823523-52823542 | Msa0687840:intron | 30.0% | |
| ! | AGTATGGATTTTTCTTCTGA+TGG | + | chr4_4:52823520-52823539 | None:intergenic | 30.0% |
| AGAAGAAAAATCCATACTGT+TGG | - | chr4_4:52823522-52823541 | Msa0687840:intron | 30.0% | |
| GAAGAAAAATCCATACTGTT+GGG | - | chr4_4:52823523-52823542 | Msa0687840:intron | 30.0% | |
| !! | GTCTTTTATTTGTATTCTGC+CGG | + | chr4_4:52823627-52823646 | None:intergenic | 30.0% |
| CAAAACATATTTAGCAAGAC+TGG | - | chr4_4:52823911-52823930 | Msa0687840:intron | 30.0% | |
| !! | TATATTGATTGGCTTAGTCA+TGG | - | chr4_4:52824110-52824129 | Msa0687840:intron | 30.0% |
| !! | ATATTGATTGGCTTAGTCAT+GGG | - | chr4_4:52824111-52824130 | Msa0687840:intron | 30.0% |
| TGTCTCACTTATCGAAAAAT+GGG | + | chr4_4:52824141-52824160 | None:intergenic | 30.0% | |
| ATGTCTCACTTATCGAAAAA+TGG | + | chr4_4:52824142-52824161 | None:intergenic | 30.0% | |
| ACCACTAATACAATATGCAA+AGG | - | chr4_4:52824214-52824233 | Msa0687840:intron | 30.0% | |
| ACCTTTGCATATTGTATTAG+TGG | + | chr4_4:52824218-52824237 | None:intergenic | 30.0% | |
| CTAAGACTAAGATAGAAATG+TGG | + | chr4_4:52824285-52824304 | None:intergenic | 30.0% | |
| ! | CACATTTCTATCTTAGTCTT+AGG | - | chr4_4:52824283-52824302 | Msa0687840:intron | 30.0% |
| ! | CGAGTTTCTGAAAAAGATTA+AGG | + | chr4_4:52824328-52824347 | None:intergenic | 30.0% |
| TTCAGATTAAGGAACTCAAT+GGG | + | chr4_4:52824448-52824467 | None:intergenic | 30.0% | |
| ATTCAGATTAAGGAACTCAA+TGG | + | chr4_4:52824449-52824468 | None:intergenic | 30.0% | |
| AAACAACATTTCAATCGTAG+AGG | + | chr4_4:52824801-52824820 | None:intergenic | 30.0% | |
| CAAGGAATATAGTTGTTCAA+TGG | + | chr4_4:52824828-52824847 | None:intergenic | 30.0% | |
| CAAAATACAACTTACAGCAA+AGG | + | chr4_4:52824874-52824893 | None:intergenic | 30.0% | |
| TTCAAAAATGGTGTATGTCA+AGG | - | chr4_4:52824961-52824980 | Msa0687840:CDS | 30.0% | |
| ! | TGCACAGTTAAGTTCAATTT+TGG | - | chr4_4:52825060-52825079 | Msa0687840:CDS | 30.0% |
| !! | AGTTAAGTTCAATTTTGGTC+CGG | - | chr4_4:52825065-52825084 | Msa0687840:CDS | 30.0% |
| ! | TGATTTTCAAAACCATGATG+AGG | + | chr4_4:52825153-52825172 | None:intergenic | 30.0% |
| TTGACTGAGAAGAAATCTAA+TGG | - | chr4_4:52825189-52825208 | Msa0687840:CDS | 30.0% | |
| TCATACGAGCAAAAATCAAA+TGG | - | chr4_4:52825324-52825343 | Msa0687840:CDS | 30.0% | |
| TTTACAAATGACTAGGTTAG+TGG | - | chr4_4:52825552-52825571 | Msa0687840:CDS | 30.0% | |
| TTAGTGGTGTAAACTTATGA+AGG | - | chr4_4:52825568-52825587 | Msa0687840:CDS | 30.0% | |
| TAGTGGTGTAAACTTATGAA+GGG | - | chr4_4:52825569-52825588 | Msa0687840:CDS | 30.0% | |
| TGAAATATAAGAATTTCCCC+TGG | + | chr4_4:52825618-52825637 | None:intergenic | 30.0% | |
| GGGAAATTCTTATATTTCAG+AGG | - | chr4_4:52825619-52825638 | Msa0687840:exon | 30.0% | |
| GAGATTCAATCTGAAAAGAG+AGG | + | chr4_4:52821184-52821203 | None:intergenic | 35.0% | |
| !!! | ATTAGGGTTTTGAGTGCAAT+CGG | + | chr4_4:52821208-52821227 | None:intergenic | 35.0% |
| ACTCAAAACCCTAATTTCCA+TGG | - | chr4_4:52821213-52821232 | Msa0687840:three_prime_UTR | 35.0% | |
| GAAGTGTATCCATGGAAATT+AGG | + | chr4_4:52821225-52821244 | None:intergenic | 35.0% | |
| TTTCGGTGAATTCTTCTGTT+CGG | + | chr4_4:52821479-52821498 | None:intergenic | 35.0% | |
| ! | GGTTGTTCTCTTTTCTGTTT+CGG | + | chr4_4:52821496-52821515 | None:intergenic | 35.0% |
| ! | AAATTGGTTCTTCCTTGACA+GGG | + | chr4_4:52821576-52821595 | None:intergenic | 35.0% |
| AACAATAACAACCACACGAA+CGG | - | chr4_4:52821766-52821785 | Msa0687840:CDS | 35.0% | |
| ! | CAAAAGGGTATAGAATGGTT+AGG | - | chr4_4:52821932-52821951 | Msa0687840:intron | 35.0% |
| AGATAAAGGTAGTGAGGTTA+GGG | - | chr4_4:52821992-52822011 | Msa0687840:intron | 35.0% | |
| TGATGGGAGTAAGATTCATA+AGG | - | chr4_4:52822110-52822129 | Msa0687840:intron | 35.0% | |
| GTAAGATTCATAAGGCTTTG+AGG | - | chr4_4:52822118-52822137 | Msa0687840:intron | 35.0% | |
| TATGGTGAAGGTGATGTTAT+TGG | - | chr4_4:52822162-52822181 | Msa0687840:intron | 35.0% | |
| ATGGTGAAGGTGATGTTATT+GGG | - | chr4_4:52822163-52822182 | Msa0687840:intron | 35.0% | |
| TGCTCCGAAAAATCAGAATT+TGG | - | chr4_4:52822218-52822237 | Msa0687840:intron | 35.0% | |
| !! | TGGTTTGGTATAAAGGACAA+CGG | - | chr4_4:52822238-52822257 | Msa0687840:intron | 35.0% |
| TGCTTATAATCCAGATGCTA+AGG | - | chr4_4:52822263-52822282 | Msa0687840:intron | 35.0% | |
| GATAGTTCATTATTTAGGGG+TGG | - | chr4_4:52822510-52822529 | Msa0687840:intron | 35.0% | |
| TAGTTCATTATTTAGGGGTG+GGG | - | chr4_4:52822512-52822531 | Msa0687840:intron | 35.0% | |
| CATAACCAAGTTCACAATCA+AGG | + | chr4_4:52822574-52822593 | None:intergenic | 35.0% | |
| CTTGATTGTGAACTTGGTTA+TGG | - | chr4_4:52822572-52822591 | Msa0687840:intron | 35.0% | |
| GTCCATATATACGTAAGAGT+TGG | - | chr4_4:52822642-52822661 | Msa0687840:intron | 35.0% | |
| CGTAAGAGTTGGAAATGTAT+TGG | - | chr4_4:52822653-52822672 | Msa0687840:intron | 35.0% | |
| ACTTGTACTACGAAACATTC+TGG | - | chr4_4:52822711-52822730 | Msa0687840:intron | 35.0% | |
| AACAGGACAAACTGGATTTA+AGG | + | chr4_4:52822931-52822950 | None:intergenic | 35.0% | |
| ATCGGTCCTTTCACAAAAAA+CGG | + | chr4_4:52823017-52823036 | None:intergenic | 35.0% | |
| TGCTATAGACATTGTTCCAT+CGG | + | chr4_4:52823035-52823054 | None:intergenic | 35.0% | |
| AACAATGTCTATAGCAGTGT+AGG | - | chr4_4:52823039-52823058 | Msa0687840:intron | 35.0% | |
| !! | GTCTATTTTGCTATGCAATG+TGG | + | chr4_4:52823140-52823159 | None:intergenic | 35.0% |
| ! | TATACAATAGAGGCACGAAA+TGG | + | chr4_4:52823458-52823477 | None:intergenic | 35.0% |
| ! | TGAAAACACCATCTAAAGCT+TGG | - | chr4_4:52823943-52823962 | Msa0687840:intron | 35.0% |
| ATTCACTATTGGAAGTTAGG+TGG | - | chr4_4:52824477-52824496 | Msa0687840:intron | 35.0% | |
| CTGCACAGAAAAGAGAATAT+TGG | + | chr4_4:52824924-52824943 | None:intergenic | 35.0% | |
| ! | CAATATTCTCTTTTCTGTGC+AGG | - | chr4_4:52824922-52824941 | Msa0687840:CDS | 35.0% |
| !!! | AACTGTGCAGTTTTGTTCAT+GGG | + | chr4_4:52825049-52825068 | None:intergenic | 35.0% |
| !!! | TAACTGTGCAGTTTTGTTCA+TGG | + | chr4_4:52825050-52825069 | None:intergenic | 35.0% |
| TCCCTCATGATTTCAATGAA+CGG | - | chr4_4:52825100-52825119 | Msa0687840:CDS | 35.0% | |
| TTGACTGTGAAGAAATCAAC+AGG | - | chr4_4:52825243-52825262 | Msa0687840:CDS | 35.0% | |
| TCGACTGAGAAGAAATCAAA+TGG | - | chr4_4:52825270-52825289 | Msa0687840:CDS | 35.0% | |
| TCGACTGAGAAGAAATCAAA+TGG | - | chr4_4:52825270-52825289 | Msa0687840:CDS | 35.0% | |
| AAAATCAAATGGAGAGTCGA+AGG | - | chr4_4:52825335-52825354 | Msa0687840:CDS | 35.0% | |
| TGAGAAGAAATCAGATGAAG+AGG | - | chr4_4:52825410-52825429 | Msa0687840:CDS | 35.0% | |
| TCTGTGCAGCAAAAAATACT+TGG | + | chr4_4:52825481-52825500 | None:intergenic | 35.0% | |
| !!! | AGTATTTTTTGCTGCACAGA+TGG | - | chr4_4:52825481-52825500 | Msa0687840:CDS | 35.0% |
| AGTGGTGTAAACTTATGAAG+GGG | - | chr4_4:52825570-52825589 | Msa0687840:CDS | 35.0% | |
| ACTCTTCCTTCTTCTCTCAT+CGG | - | chr4_4:52821152-52821171 | Msa0687840:three_prime_UTR | 40.0% | |
| TTCCTCTTCGTCTTTGTATG+TGG | + | chr4_4:52821251-52821270 | None:intergenic | 40.0% | |
| CGAAGAGGAAGATGAAGAAA+TGG | - | chr4_4:52821261-52821280 | Msa0687840:three_prime_UTR | 40.0% | |
| TAATTCCATATCAACCACGG+TGG | + | chr4_4:52821368-52821387 | None:intergenic | 40.0% | |
| GGTTCTTCTTCATCTTCATC+AGG | + | chr4_4:52821517-52821536 | None:intergenic | 40.0% | |
| GAAAGTTGCTTCTGCTTCTT+CGG | + | chr4_4:52821544-52821563 | None:intergenic | 40.0% | |
| ! | GAAATTGGTTCTTCCTTGAC+AGG | + | chr4_4:52821577-52821596 | None:intergenic | 40.0% |
| ! | GTTCGTGTGGTTGTTATTGT+TGG | + | chr4_4:52821767-52821786 | None:intergenic | 40.0% |
| TTCTGATAACACCAGTACAG+AGG | - | chr4_4:52821803-52821822 | Msa0687840:CDS | 40.0% | |
| TGACAAAAGTGACGATACAC+CGG | - | chr4_4:52821831-52821850 | Msa0687840:CDS | 40.0% | |
| !! | AAGTTGAGTTGAGTGAGGAT+AGG | - | chr4_4:52821893-52821912 | Msa0687840:CDS | 40.0% |
| ! | GAGCACAAAAGGGTATAGAA+TGG | - | chr4_4:52821927-52821946 | Msa0687840:intron | 40.0% |
| GAGATAAAGGTAGTGAGGTT+AGG | - | chr4_4:52821991-52822010 | Msa0687840:intron | 40.0% | |
| GATAAAGGTAGTGAGGTTAG+GGG | - | chr4_4:52821993-52822012 | Msa0687840:intron | 40.0% | |
| !! | GGGTATGATGGGAATAGTTT+TGG | - | chr4_4:52822075-52822094 | Msa0687840:intron | 40.0% |
| !! | AAGGCTTTGAGGGAGAATTA+TGG | - | chr4_4:52822129-52822148 | Msa0687840:intron | 40.0% |
| !! | AGGCTTTGAGGGAGAATTAT+GGG | - | chr4_4:52822130-52822149 | Msa0687840:intron | 40.0% |
| AATTATGGGGATGAGGGTTA+TGG | - | chr4_4:52822144-52822163 | Msa0687840:intron | 40.0% | |
| TAACCAGGTACAACTTTAGG+TGG | + | chr4_4:52822294-52822313 | None:intergenic | 40.0% | |
| GACTAACCAGGTACAACTTT+AGG | + | chr4_4:52822297-52822316 | None:intergenic | 40.0% | |
| AGCAGATTTGAAGACTAACC+AGG | + | chr4_4:52822309-52822328 | None:intergenic | 40.0% | |
| TAGCTCCTTGATTGTGAACT+TGG | - | chr4_4:52822566-52822585 | Msa0687840:intron | 40.0% | |
| GTACAAGTGTTTGTAGTGTC+TGG | + | chr4_4:52822699-52822718 | None:intergenic | 40.0% | |
| !!! | GTTTTTTGTGAAAGGACCGA+TGG | - | chr4_4:52823016-52823035 | Msa0687840:intron | 40.0% |
| !!! | TTTATTTTTTGTGGGGGTGG+GGG | + | chr4_4:52823097-52823116 | None:intergenic | 40.0% |
| !!! | GTTTATTTTTTGTGGGGGTG+GGG | + | chr4_4:52823098-52823117 | None:intergenic | 40.0% |
| !!! | GGTTTATTTTTTGTGGGGGT+GGG | + | chr4_4:52823099-52823118 | None:intergenic | 40.0% |
| !!! | AGGTTTATTTTTTGTGGGGG+TGG | + | chr4_4:52823100-52823119 | None:intergenic | 40.0% |
| ATGCAATGTGGTTCAGGAAT+GGG | + | chr4_4:52823128-52823147 | None:intergenic | 40.0% | |
| TATGCAATGTGGTTCAGGAA+TGG | + | chr4_4:52823129-52823148 | None:intergenic | 40.0% | |
| ! | TTTGCTATGCAATGTGGTTC+AGG | + | chr4_4:52823134-52823153 | None:intergenic | 40.0% |
| ACAGAGCATGAAAGGAACTT+AGG | + | chr4_4:52823272-52823291 | None:intergenic | 40.0% | |
| ACAAGAGAACAGAGCATGAA+AGG | + | chr4_4:52823280-52823299 | None:intergenic | 40.0% | |
| CAGCAACTCAGATCAAAAAC+AGG | + | chr4_4:52823316-52823335 | None:intergenic | 40.0% | |
| AAAATCCATACTGTTGGGAC+CGG | - | chr4_4:52823528-52823547 | Msa0687840:intron | 40.0% | |
| AAAATCCATACTGTTGGGAC+CGG | - | chr4_4:52823528-52823547 | Msa0687840:intron | 40.0% | |
| TGCAAGTTTCTCGGATGTAA+GGG | + | chr4_4:52823847-52823866 | None:intergenic | 40.0% | |
| TTGCAAGTTTCTCGGATGTA+AGG | + | chr4_4:52823848-52823867 | None:intergenic | 40.0% | |
| CATCTCTGTTGCAAGTTTCT+CGG | + | chr4_4:52823856-52823875 | None:intergenic | 40.0% | |
| ! | GAGATAGAAGTGTGACCAAA+AGG | - | chr4_4:52823875-52823894 | Msa0687840:intron | 40.0% |
| CATATTTAGCAAGACTGGGT+AGG | - | chr4_4:52823916-52823935 | Msa0687840:intron | 40.0% | |
| ! | TAAAGCCTCCCATGCATTTT+TGG | - | chr4_4:52824163-52824182 | Msa0687840:intron | 40.0% |
| ACATCAATAGCGTGGAAAAG+TGG | - | chr4_4:52824528-52824547 | Msa0687840:intron | 40.0% | |
| TAACAGTTGTTCTGTACGCA+AGG | + | chr4_4:52824846-52824865 | None:intergenic | 40.0% | |
| GTAGCTTTCAAAGACCTCTA+TGG | - | chr4_4:52824985-52825004 | Msa0687840:CDS | 40.0% | |
| AGAGTATACATTGAAGCAGC+AGG | + | chr4_4:52825024-52825043 | None:intergenic | 40.0% | |
| !!! | ACTGTGCAGTTTTGTTCATG+GGG | + | chr4_4:52825048-52825067 | None:intergenic | 40.0% |
| TGAGGGAAAAATTCGAAGTC+CGG | + | chr4_4:52825087-52825106 | None:intergenic | 40.0% | |
| GCCGTTCATTGAAATCATGA+GGG | + | chr4_4:52825104-52825123 | None:intergenic | 40.0% | |
| TGATGAGGAACTTCAACCAT+TGG | + | chr4_4:52825138-52825157 | None:intergenic | 40.0% | |
| ATGGTTGAAGTTCCTCATCA+TGG | - | chr4_4:52825138-52825157 | Msa0687840:CDS | 40.0% | |
| ACTGTGAAGAAATCAACAGG+AGG | - | chr4_4:52825246-52825265 | Msa0687840:CDS | 40.0% | |
| CTGTGAAGAAATCAACAGGA+GGG | - | chr4_4:52825247-52825266 | Msa0687840:CDS | 40.0% | |
| GGAGATGAAATCAGATGAAG+AGG | - | chr4_4:52825356-52825375 | Msa0687840:CDS | 40.0% | |
| !!! | TTTTTTGCTGCACAGATGGA+TGG | - | chr4_4:52825485-52825504 | Msa0687840:CDS | 40.0% |
| ! | TTTTTGCTGCACAGATGGAT+GGG | - | chr4_4:52825486-52825505 | Msa0687840:CDS | 40.0% |
| ! | GGATTGTCCTTTTCACCTTT+TGG | - | chr4_4:52825670-52825689 | Msa0687840:five_prime_UTR | 40.0% |
| TGTGGCTTGAAGTGTATCCA+TGG | + | chr4_4:52821233-52821252 | None:intergenic | 45.0% | |
| AGCCACATACAAAGACGAAG+AGG | - | chr4_4:52821246-52821265 | Msa0687840:three_prime_UTR | 45.0% | |
| ! | GTTGTTGTTGTGACGGTTGA+AGG | + | chr4_4:52821292-52821311 | None:intergenic | 45.0% |
| GGAAGAACCAATTTCGTTGC+CGG | - | chr4_4:52821582-52821601 | Msa0687840:CDS | 45.0% | |
| TTAACCTCCGGCAACGAAAT+TGG | + | chr4_4:52821592-52821611 | None:intergenic | 45.0% | |
| AATTCCGGTTACAACCACAC+CGG | - | chr4_4:52821633-52821652 | Msa0687840:CDS | 45.0% | |
| AATAACAACCACACGAACGG+TGG | - | chr4_4:52821769-52821788 | Msa0687840:CDS | 45.0% | |
| TTGTCAGGAAACCTCTGTAC+TGG | + | chr4_4:52821817-52821836 | None:intergenic | 45.0% | |
| !!! | GGTGTATCGTCACTTTTGTC+AGG | + | chr4_4:52821832-52821851 | None:intergenic | 45.0% |
| !! | GGAGAAAGTTGAGTTGAGTG+AGG | - | chr4_4:52821888-52821907 | Msa0687840:CDS | 45.0% |
| AGTGAGGATAGGTTAAGTGC+AGG | - | chr4_4:52821904-52821923 | Msa0687840:intron | 45.0% | |
| GTGAGGATAGGTTAAGTGCA+GGG | - | chr4_4:52821905-52821924 | Msa0687840:intron | 45.0% | |
| ! | TTAAGTGCAGGGAGCACAAA+AGG | - | chr4_4:52821916-52821935 | Msa0687840:intron | 45.0% |
| ! | TAAGTGCAGGGAGCACAAAA+GGG | - | chr4_4:52821917-52821936 | Msa0687840:intron | 45.0% |
| AGAATGGTTAGGGCAACAAG+AGG | - | chr4_4:52821943-52821962 | Msa0687840:intron | 45.0% | |
| GAATGGTTAGGGCAACAAGA+GGG | - | chr4_4:52821944-52821963 | Msa0687840:intron | 45.0% | |
| AATGGTTAGGGCAACAAGAG+GGG | - | chr4_4:52821945-52821964 | Msa0687840:intron | 45.0% | |
| !! | TTGGGTTGGACAATGGAGAA+GGG | - | chr4_4:52822033-52822052 | Msa0687840:intron | 45.0% |
| ! | AATGGAGAAGGGTGATTTGC+AGG | - | chr4_4:52822044-52822063 | Msa0687840:intron | 45.0% |
| CTATTCCCATCATACCCAAC+TGG | + | chr4_4:52822072-52822091 | None:intergenic | 45.0% | |
| !! | GGCTTTGAGGGAGAATTATG+GGG | - | chr4_4:52822131-52822150 | Msa0687840:intron | 45.0% |
| AGGGAGAATTATGGGGATGA+GGG | - | chr4_4:52822138-52822157 | Msa0687840:intron | 45.0% | |
| GGAGCAAACTTATCTCCATC+AGG | + | chr4_4:52822204-52822223 | None:intergenic | 45.0% | |
| GATCCACCTAAAGTTGTACC+TGG | - | chr4_4:52822288-52822307 | Msa0687840:intron | 45.0% | |
| TTCATTATTTAGGGGTGGGG+AGG | - | chr4_4:52822515-52822534 | Msa0687840:intron | 45.0% | |
| TCATTATTTAGGGGTGGGGA+GGG | - | chr4_4:52822516-52822535 | Msa0687840:intron | 45.0% | |
| TTCTAGATGGTGAGTTGCGT+GGG | + | chr4_4:52822794-52822813 | None:intergenic | 45.0% | |
| TTTCTAGATGGTGAGTTGCG+TGG | + | chr4_4:52822795-52822814 | None:intergenic | 45.0% | |
| !!! | TTATTTTTTGTGGGGGTGGG+GGG | + | chr4_4:52823096-52823115 | None:intergenic | 45.0% |
| ATGTGATTGCAAGCCCTAGT+TGG | + | chr4_4:52823173-52823192 | None:intergenic | 45.0% | |
| TTGCAATCACATGCATCTGC+TGG | - | chr4_4:52823181-52823200 | Msa0687840:intron | 45.0% | |
| !!! | TGCTGGTGTCATCTTTTCTC+TGG | - | chr4_4:52823198-52823217 | Msa0687840:intron | 45.0% |
| CTGTTCTCTTGTGCATTTGC+TGG | - | chr4_4:52823288-52823307 | Msa0687840:intron | 45.0% | |
| TCTGCCAAGAAAGGAACTTG+GGG | + | chr4_4:52823358-52823377 | None:intergenic | 45.0% | |
| CTCTGCCAAGAAAGGAACTT+GGG | + | chr4_4:52823359-52823378 | None:intergenic | 45.0% | |
| ! | ATGTAAGGGGTGGAAGCTTT+TGG | + | chr4_4:52823833-52823852 | None:intergenic | 45.0% |
| GCAAGTTTCTCGGATGTAAG+GGG | + | chr4_4:52823846-52823865 | None:intergenic | 45.0% | |
| !! | TACGGTTGCCAAGCTTTAGA+TGG | + | chr4_4:52823954-52823973 | None:intergenic | 45.0% |
| AAAGCTTGGCAACCGTATGT+TGG | - | chr4_4:52823957-52823976 | Msa0687840:intron | 45.0% | |
| AAGCTTGGCAACCGTATGTT+GGG | - | chr4_4:52823958-52823977 | Msa0687840:intron | 45.0% | |
| ACCACCAGCCAAAAATGCAT+GGG | + | chr4_4:52824174-52824193 | None:intergenic | 45.0% | |
| AACCACCAGCCAAAAATGCA+TGG | + | chr4_4:52824175-52824194 | None:intergenic | 45.0% | |
| CATCCCAAGAACCAACTATC+CGG | - | chr4_4:52824353-52824372 | Msa0687840:intron | 45.0% | |
| ATCCCAAGAACCAACTATCC+GGG | - | chr4_4:52824354-52824373 | Msa0687840:intron | 45.0% | |
| GGCTTTGCCATGGTTTCAAT+TGG | + | chr4_4:52824412-52824431 | None:intergenic | 45.0% | |
| TTCCCATCCCAAGCAATCAA+TGG | + | chr4_4:52824509-52824528 | None:intergenic | 45.0% | |
| GCTTTCAAAGACCTCTATGG+CGG | - | chr4_4:52824988-52825007 | Msa0687840:CDS | 45.0% | |
| GGCCGTTCATTGAAATCATG+AGG | + | chr4_4:52825105-52825124 | None:intergenic | 45.0% | |
| !! | TCAACCATTGGCTTGGGAAT+TGG | + | chr4_4:52825126-52825145 | None:intergenic | 45.0% |
| !! | GGAACTTCAACCATTGGCTT+GGG | + | chr4_4:52825132-52825151 | None:intergenic | 45.0% |
| ! | AGGAACTTCAACCATTGGCT+TGG | + | chr4_4:52825133-52825152 | None:intergenic | 45.0% |
| GAAATCAGATGAAGAGGCGA+AGG | - | chr4_4:52825362-52825381 | Msa0687840:CDS | 45.0% | |
| GCGATTCCGATGAGAGAAGA+AGG | + | chr4_4:52821161-52821180 | None:intergenic | 50.0% | |
| ! | TGTCTCCACCGTGGTTGATA+TGG | - | chr4_4:52821360-52821379 | Msa0687840:three_prime_UTR | 50.0% |
| TCCCTCCAACGACGGAAAAT+CGG | - | chr4_4:52821417-52821436 | Msa0687840:CDS | 50.0% | |
| ! | TCCGATTTTCCGTCGTTGGA+GGG | + | chr4_4:52821421-52821440 | None:intergenic | 50.0% |
| ! | TTCCGATTTTCCGTCGTTGG+AGG | + | chr4_4:52821422-52821441 | None:intergenic | 50.0% |
| ! | GAGTTCCGATTTTCCGTCGT+TGG | + | chr4_4:52821425-52821444 | None:intergenic | 50.0% |
| TGCTTCTGCTTCTTCGGAAG+CGG | + | chr4_4:52821538-52821557 | None:intergenic | 50.0% | |
| TTCCTCTCTGAACCCTGTCA+AGG | - | chr4_4:52821561-52821580 | Msa0687840:CDS | 50.0% | |
| TTCCTTGACAGGGTTCAGAG+AGG | + | chr4_4:52821566-52821585 | None:intergenic | 50.0% | |
| AGAACCAATTTCGTTGCCGG+AGG | - | chr4_4:52821585-52821604 | Msa0687840:CDS | 50.0% | |
| GCAGCAGCATTGTTAACCTC+CGG | + | chr4_4:52821604-52821623 | None:intergenic | 50.0% | |
| TGCTGCTGCTGTGTCAATTC+CGG | - | chr4_4:52821618-52821637 | Msa0687840:CDS | 50.0% | |
| !! | GTTGGGTTGGACAATGGAGA+AGG | - | chr4_4:52822032-52822051 | Msa0687840:intron | 50.0% |
| ! | GTGATTTGCAGGCACCAGTT+GGG | - | chr4_4:52822055-52822074 | Msa0687840:intron | 50.0% |
| AGGCACCAGTTGGGTATGAT+GGG | - | chr4_4:52822064-52822083 | Msa0687840:intron | 50.0% | |
| GAGGGAGAATTATGGGGATG+AGG | - | chr4_4:52822137-52822156 | Msa0687840:intron | 50.0% | |
| GGTGGATCTTCCTTAGCATC+TGG | + | chr4_4:52822276-52822295 | None:intergenic | 50.0% | |
| TCTAGATGGTGAGTTGCGTG+GGG | + | chr4_4:52822793-52822812 | None:intergenic | 50.0% | |
| CGGTGAAGAACAGGACAAAC+TGG | + | chr4_4:52822939-52822958 | None:intergenic | 50.0% | |
| GGAGGGTGGGGAATATATGA+AGG | + | chr4_4:52823075-52823094 | None:intergenic | 50.0% | |
| TGGTTCAGGAATGGGTGGTA+AGG | + | chr4_4:52823120-52823139 | None:intergenic | 50.0% | |
| CAATGTGGTTCAGGAATGGG+TGG | + | chr4_4:52823125-52823144 | None:intergenic | 50.0% | |
| AGACCCACTCTTCACCAACT+AGG | - | chr4_4:52823156-52823175 | Msa0687840:intron | 50.0% | |
| GACCCACTCTTCACCAACTA+GGG | - | chr4_4:52823157-52823176 | Msa0687840:intron | 50.0% | |
| !! | AGCCCTAGTTGGTGAAGAGT+GGG | + | chr4_4:52823162-52823181 | None:intergenic | 50.0% |
| !! | AAGCCCTAGTTGGTGAAGAG+TGG | + | chr4_4:52823163-52823182 | None:intergenic | 50.0% |
| GCTCTGCCAAGAAAGGAACT+TGG | + | chr4_4:52823360-52823379 | None:intergenic | 50.0% | |
| AGCAGATGCTCTGCCAAGAA+AGG | + | chr4_4:52823367-52823386 | None:intergenic | 50.0% | |
| CTACGACATCCAGAGAGAAC+AGG | - | chr4_4:52823738-52823757 | Msa0687840:intron | 50.0% | |
| TCTCTCTCTCCTGTTCTCTC+TGG | + | chr4_4:52823750-52823769 | None:intergenic | 50.0% | |
| AGTTTCTCGGATGTAAGGGG+TGG | + | chr4_4:52823843-52823862 | None:intergenic | 50.0% | |
| AGCTTGGCAACCGTATGTTG+GGG | - | chr4_4:52823959-52823978 | Msa0687840:intron | 50.0% | |
| ACCAGCCAAAAATGCATGGG+AGG | + | chr4_4:52824171-52824190 | None:intergenic | 50.0% | |
| !!! | TCCCATGCATTTTTGGCTGG+TGG | - | chr4_4:52824170-52824189 | Msa0687840:intron | 50.0% |
| ! | CGGATAGTTGGTTCTTGGGA+TGG | + | chr4_4:52824355-52824374 | None:intergenic | 50.0% |
| TCCCAAGAACCAACTATCCG+GGG | - | chr4_4:52824355-52824374 | Msa0687840:intron | 50.0% | |
| AACCATGGCAAAGCCCTGTA+TGG | - | chr4_4:52824417-52824436 | Msa0687840:intron | 50.0% | |
| TCAATGGGCCAGTCCATACA+GGG | + | chr4_4:52824433-52824452 | None:intergenic | 50.0% | |
| ! | GTGCTCGCCATTGATTGCTT+GGG | - | chr4_4:52824499-52824518 | Msa0687840:intron | 50.0% |
| ! | TCGCCATTGATTGCTTGGGA+TGG | - | chr4_4:52824503-52824522 | Msa0687840:intron | 50.0% |
| ! | CGCCATTGATTGCTTGGGAT+GGG | - | chr4_4:52824504-52824523 | Msa0687840:intron | 50.0% |
| GGATGGGAACATCAATAGCG+TGG | - | chr4_4:52824520-52824539 | Msa0687840:intron | 50.0% | |
| GATAGTAACGACCGCCATAG+AGG | + | chr4_4:52825002-52825021 | None:intergenic | 50.0% | |
| ! | GGGTGCGGTTGTTGTTGTGA+CGG | + | chr4_4:52821299-52821318 | None:intergenic | 55.0% |
| ATCAACCACGGTGGAGACAG+CGG | + | chr4_4:52821359-52821378 | None:intergenic | 55.0% | |
| ! | TTTTCCGTCGTTGGAGGGAG+TGG | + | chr4_4:52821416-52821435 | None:intergenic | 55.0% |
| AGAGTCGTCGGAGGGTTCAT+CGG | + | chr4_4:52821455-52821474 | None:intergenic | 55.0% | |
| CTTCTGTTCGGCAGAGTCGT+CGG | + | chr4_4:52821467-52821486 | None:intergenic | 55.0% | |
| TTCGCCGGTGTGGTTGTAAC+CGG | + | chr4_4:52821640-52821659 | None:intergenic | 55.0% | |
| GTTACAACCACACCGGCGAA+TGG | - | chr4_4:52821640-52821659 | Msa0687840:CDS | 55.0% | |
| TGTCTTCTCCACCGTTCGTG+TGG | + | chr4_4:52821780-52821799 | None:intergenic | 55.0% | |
| TAGGGCAACAAGAGGGGTAG+TGG | - | chr4_4:52821951-52821970 | Msa0687840:intron | 55.0% | |
| !! | GCAACAAGAGGGGTAGTGGA+AGG | - | chr4_4:52821955-52821974 | Msa0687840:intron | 55.0% |
| GTAGTGAGGTTAGGGGAGAG+TGG | - | chr4_4:52822000-52822019 | Msa0687840:intron | 55.0% | |
| TAGGGGAGAGTGGACATACG+CGG | - | chr4_4:52822010-52822029 | Msa0687840:intron | 55.0% | |
| GAGAGTGGACATACGCGGTT+GGG | - | chr4_4:52822015-52822034 | Msa0687840:intron | 55.0% | |
| !! | TACGCGGTTGGGTTGGACAA+TGG | - | chr4_4:52822026-52822045 | Msa0687840:intron | 55.0% |
| ! | GGTGATTTGCAGGCACCAGT+TGG | - | chr4_4:52822054-52822073 | Msa0687840:intron | 55.0% |
| CAGGCACCAGTTGGGTATGA+TGG | - | chr4_4:52822063-52822082 | Msa0687840:intron | 55.0% | |
| GGGGATGAGGGTTATGGTGA+AGG | - | chr4_4:52822150-52822169 | Msa0687840:intron | 55.0% | |
| CGTATCTGGTGAGTGGCTTC+GGG | + | chr4_4:52822859-52822878 | None:intergenic | 55.0% | |
| CCGTATCTGGTGAGTGGCTT+CGG | + | chr4_4:52822860-52822879 | None:intergenic | 55.0% | |
| CCGAAGCCACTCACCAGATA+CGG | - | chr4_4:52822857-52822876 | Msa0687840:intron | 55.0% | |
| AGGTGTATCTCGGCCGTATC+TGG | + | chr4_4:52822873-52822892 | None:intergenic | 55.0% | |
| GCTGCCCCAAGTTCCTTTCT+TGG | - | chr4_4:52823351-52823370 | Msa0687840:intron | 55.0% | |
| TTCTGCCGGTCCCAACAGTA+TGG | + | chr4_4:52823536-52823555 | None:intergenic | 55.0% | |
| TTCTGCCGGTCCCAACAGTA+TGG | + | chr4_4:52823536-52823555 | None:intergenic | 55.0% | |
| GCTTGGCAACCGTATGTTGG+GGG | - | chr4_4:52823960-52823979 | Msa0687840:intron | 55.0% | |
| CAACCGTATGTTGGGGGTGA+GGG | - | chr4_4:52823966-52823985 | Msa0687840:intron | 55.0% | |
| !!! | GCCTCCCATGCATTTTTGGC+TGG | - | chr4_4:52824167-52824186 | Msa0687840:intron | 55.0% |
| ! | CCCCCGGATAGTTGGTTCTT+GGG | + | chr4_4:52824359-52824378 | None:intergenic | 55.0% |
| CCCAAGAACCAACTATCCGG+GGG | - | chr4_4:52824356-52824375 | Msa0687840:intron | 55.0% | |
| ! | TCCCCCGGATAGTTGGTTCT+TGG | + | chr4_4:52824360-52824379 | None:intergenic | 55.0% |
| GTCCATACAGGGCTTTGCCA+TGG | + | chr4_4:52824422-52824441 | None:intergenic | 55.0% | |
| TGGCAAAGCCCTGTATGGAC+TGG | - | chr4_4:52824422-52824441 | Msa0687840:intron | 55.0% | |
| CTCAATGGGCCAGTCCATAC+AGG | + | chr4_4:52824434-52824453 | None:intergenic | 55.0% | |
| ! | GGTGCTCGCCATTGATTGCT+TGG | - | chr4_4:52824498-52824517 | Msa0687840:intron | 55.0% |
| ACGGCCAATTCCCAAGCCAA+TGG | - | chr4_4:52825119-52825138 | Msa0687840:CDS | 55.0% | |
| GGTGGAGGAAGCAGGTGGTT+CGG | + | chr4_4:52821326-52821345 | None:intergenic | 60.0% | |
| TCAACCACGGTGGAGACAGC+GGG | + | chr4_4:52821358-52821377 | None:intergenic | 60.0% | |
| ACCACCACTCCCTCCAACGA+CGG | - | chr4_4:52821409-52821428 | Msa0687840:CDS | 60.0% | |
| TCGTCGGAGGGTTCATCGGA+GGG | + | chr4_4:52821451-52821470 | None:intergenic | 60.0% | |
| TGTTCGGCAGAGTCGTCGGA+GGG | + | chr4_4:52821463-52821482 | None:intergenic | 60.0% | |
| GTCGTCGCTGTTCCATTCGC+CGG | + | chr4_4:52821655-52821674 | None:intergenic | 60.0% | |
| !! | GAGGGGTAGTGGAAGGTGCT+TGG | - | chr4_4:52821962-52821981 | Msa0687840:intron | 60.0% |
| GGAGAGTGGACATACGCGGT+TGG | - | chr4_4:52822014-52822033 | Msa0687840:intron | 60.0% | |
| GTGGACATACGCGGTTGGGT+TGG | - | chr4_4:52822019-52822038 | Msa0687840:intron | 60.0% | |
| ATTTAGGGGTGGGGAGGGTG+AGG | - | chr4_4:52822521-52822540 | Msa0687840:intron | 60.0% | |
| TCTCGGCCGTATCTGGTGAG+TGG | + | chr4_4:52822866-52822885 | None:intergenic | 60.0% | |
| ! | TTTTTGTGGGGGTGGGGGGA+GGG | + | chr4_4:52823092-52823111 | None:intergenic | 60.0% |
| !!! | TTTTTTGTGGGGGTGGGGGG+AGG | + | chr4_4:52823093-52823112 | None:intergenic | 60.0% |
| GCAACCGTATGTTGGGGGTG+AGG | - | chr4_4:52823965-52823984 | Msa0687840:intron | 60.0% | |
| ! | GAGGGCGCAATTGGCAGATG+AGG | - | chr4_4:52823984-52824003 | Msa0687840:intron | 60.0% |
| ! | GGTTGGTTCCCCCGGATAGT+TGG | + | chr4_4:52824367-52824386 | None:intergenic | 60.0% |
| GGGGGGGCCAATTGAAACCA+TGG | - | chr4_4:52824402-52824421 | Msa0687840:intron | 60.0% | |
| ! | GAAGCAGGTGGTTCGGCGGA+GGG | + | chr4_4:52821319-52821338 | None:intergenic | 65.0% |
| ! | GGAGGAAGCAGGTGGTTCGG+CGG | + | chr4_4:52821323-52821342 | None:intergenic | 65.0% |
| TCGACGGTGGAGGAAGCAGG+TGG | + | chr4_4:52821331-52821350 | None:intergenic | 65.0% | |
| GGTTCGACGGTGGAGGAAGC+AGG | + | chr4_4:52821334-52821353 | None:intergenic | 65.0% | |
| GGAGACAGCGGGTGGTTCGA+CGG | + | chr4_4:52821347-52821366 | None:intergenic | 65.0% | |
| TCCGTCGTTGGAGGGAGTGG+TGG | + | chr4_4:52821413-52821432 | None:intergenic | 65.0% | |
| GTCGTCGGAGGGTTCATCGG+AGG | + | chr4_4:52821452-52821471 | None:intergenic | 65.0% | |
| CTGTTCGGCAGAGTCGTCGG+AGG | + | chr4_4:52821464-52821483 | None:intergenic | 65.0% | |
| CGCTGTTCCATTCGCCGGTG+TGG | + | chr4_4:52821650-52821669 | None:intergenic | 65.0% | |
| GGGTGGGGAGGGTGAGGATT+TGG | - | chr4_4:52822527-52822546 | Msa0687840:intron | 65.0% | |
| GCGCCCTCACCCCCAACATA+CGG | + | chr4_4:52823972-52823991 | None:intergenic | 65.0% | |
| ! | GTTGGGGGTGAGGGCGCAAT+TGG | - | chr4_4:52823975-52823994 | Msa0687840:intron | 65.0% |
| CCAACCCCGCCATCCACTAG+CGG | - | chr4_4:52824381-52824400 | Msa0687840:intron | 65.0% | |
| CAACCCCGCCATCCACTAGC+GGG | - | chr4_4:52824382-52824401 | Msa0687840:intron | 65.0% | |
| AACCCCGCCATCCACTAGCG+GGG | - | chr4_4:52824383-52824402 | Msa0687840:intron | 65.0% | |
| TCAATTGGCCCCCCCGCTAG+TGG | + | chr4_4:52824397-52824416 | None:intergenic | 65.0% | |
| ! | AGGTGGTTCGGCGGAGGGTG+CGG | + | chr4_4:52821314-52821333 | None:intergenic | 70.0% |
| ! | GGAAGCAGGTGGTTCGGCGG+AGG | + | chr4_4:52821320-52821339 | None:intergenic | 70.0% |
| AGCGGGTGGTTCGACGGTGG+AGG | + | chr4_4:52821341-52821360 | None:intergenic | 70.0% | |
| GACAGCGGGTGGTTCGACGG+TGG | + | chr4_4:52821344-52821363 | None:intergenic | 70.0% | |
| ACCACCCGCTGTCTCCACCG+TGG | - | chr4_4:52821351-52821370 | Msa0687840:three_prime_UTR | 70.0% | |
| ACCACGGTGGAGACAGCGGG+TGG | + | chr4_4:52821355-52821374 | None:intergenic | 70.0% | |
| !! | GATGGCGGGGTTGGTTCCCC+CGG | + | chr4_4:52824375-52824394 | None:intergenic | 70.0% |
| !! | CCGCTAGTGGATGGCGGGGT+TGG | + | chr4_4:52824384-52824403 | None:intergenic | 70.0% |
| ACCCCGCCATCCACTAGCGG+GGG | - | chr4_4:52824384-52824403 | Msa0687840:intron | 70.0% | |
| TTGGCCCCCCCGCTAGTGGA+TGG | + | chr4_4:52824393-52824412 | None:intergenic | 70.0% | |
| TGTGGGGGTGGGGGGAGGGT+GGG | + | chr4_4:52823088-52823107 | None:intergenic | 75.0% | |
| TTGTGGGGGTGGGGGGAGGG+TGG | + | chr4_4:52823089-52823108 | None:intergenic | 75.0% | |
| ! | CCCCCCGCTAGTGGATGGCG+GGG | + | chr4_4:52824388-52824407 | None:intergenic | 75.0% |
| CCCCGCCATCCACTAGCGGG+GGG | - | chr4_4:52824385-52824404 | Msa0687840:intron | 75.0% | |
| ! | CCCCCCCGCTAGTGGATGGC+GGG | + | chr4_4:52824389-52824408 | None:intergenic | 75.0% |
| CCCGCCATCCACTAGCGGGG+GGG | - | chr4_4:52824386-52824405 | Msa0687840:intron | 75.0% | |
| ! | GCCCCCCCGCTAGTGGATGG+CGG | + | chr4_4:52824390-52824409 | None:intergenic | 75.0% |
| ! | GTGGGGGTGGGGGGAGGGTG+GGG | + | chr4_4:52823087-52823106 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 52821135 | 52825723 | 52821135 | ID=Msa0687840;Name=Msa0687840 |
| chr4_4 | mRNA | 52821135 | 52825723 | 52821135 | ID=Msa0687840-mRNA-1;Parent=Msa0687840;Name=Msa0687840-mRNA-1;_AED=0.00;_eAED=0.00;_QI=97|1|1|1|1|1|2|271|528 |
| chr4_4 | exon | 52821135 | 52821914 | 52821135 | ID=Msa0687840-mRNA-1:exon:13966;Parent=Msa0687840-mRNA-1 |
| chr4_4 | exon | 52824549 | 52825723 | 52824549 | ID=Msa0687840-mRNA-1:exon:13965;Parent=Msa0687840-mRNA-1 |
| chr4_4 | five_prime_UTR | 52825627 | 52825723 | 52825627 | ID=Msa0687840-mRNA-1:five_prime_utr;Parent=Msa0687840-mRNA-1 |
| chr4_4 | CDS | 52824549 | 52825626 | 52824549 | ID=Msa0687840-mRNA-1:cds;Parent=Msa0687840-mRNA-1 |
| chr4_4 | CDS | 52821406 | 52821914 | 52821406 | ID=Msa0687840-mRNA-1:cds;Parent=Msa0687840-mRNA-1 |
| chr4_4 | three_prime_UTR | 52821135 | 52821405 | 52821135 | ID=Msa0687840-mRNA-1:three_prime_utr;Parent=Msa0687840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
