Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20817.t1 | XP_003591392.1 | 95.8 | 191 | 6 | 1 | 1 | 191 | 1 | 189 | 1.30E-93 | 352.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20817.t1 | Q9S834 | 72.4 | 192 | 52 | 1 | 1 | 191 | 1 | 192 | 2.1e-68 | 260.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20817.t1 | G7ICX2 | 95.8 | 191 | 6 | 1 | 1 | 191 | 1 | 189 | 9.3e-94 | 352.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene20817 | 0.821021 | 5.04E-53 | -1.69E-46 |
| MS.gene049171 | MS.gene20817 | 0.87986 | 8.82E-70 | -1.69E-46 |
| MS.gene049217 | MS.gene20817 | 0.828325 | 9.57E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene20817 | 0.887848 | 9.95E-73 | -1.69E-46 |
| MS.gene049232 | MS.gene20817 | 0.839504 | 1.52E-57 | -1.69E-46 |
| MS.gene049257 | MS.gene20817 | 0.819983 | 8.72E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene20817 | 0.872584 | 2.84E-67 | -1.69E-46 |
| MS.gene049320 | MS.gene20817 | 0.841643 | 4.20E-58 | -1.69E-46 |
| MS.gene04939 | MS.gene20817 | 0.816279 | 6.00E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene20817 | 0.831387 | 1.72E-55 | -1.69E-46 |
| MS.gene049611 | MS.gene20817 | -0.802244 | 6.15E-49 | -1.69E-46 |
| MS.gene049627 | MS.gene20817 | 0.854508 | 1.18E-61 | -1.69E-46 |
| MS.gene049633 | MS.gene20817 | 0.873193 | 1.78E-67 | -1.69E-46 |
| MS.gene049805 | MS.gene20817 | 0.801322 | 9.51E-49 | -1.69E-46 |
| MS.gene049865 | MS.gene20817 | 0.852044 | 5.98E-61 | -1.69E-46 |
| MS.gene05010 | MS.gene20817 | 0.853607 | 2.14E-61 | -1.69E-46 |
| MS.gene050163 | MS.gene20817 | 0.850714 | 1.42E-60 | -1.69E-46 |
| MS.gene050165 | MS.gene20817 | 0.857283 | 1.81E-62 | -1.69E-46 |
| MS.gene050170 | MS.gene20817 | 0.906908 | 8.96E-81 | -1.69E-46 |
| MS.gene050323 | MS.gene20817 | 0.873147 | 1.84E-67 | -1.69E-46 |
| MS.gene050333 | MS.gene20817 | 0.848874 | 4.64E-60 | -1.69E-46 |
| MS.gene050403 | MS.gene20817 | 0.839997 | 1.13E-57 | -1.69E-46 |
| MS.gene050444 | MS.gene20817 | 0.837835 | 4.11E-57 | -1.69E-46 |
| MS.gene050496 | MS.gene20817 | 0.879507 | 1.18E-69 | -1.69E-46 |
| MS.gene050504 | MS.gene20817 | 0.881731 | 1.88E-70 | -1.69E-46 |
| MS.gene050518 | MS.gene20817 | 0.86268 | 4.27E-64 | -1.69E-46 |
| MS.gene050538 | MS.gene20817 | 0.824501 | 7.80E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene20817 | 0.881199 | 2.93E-70 | -1.69E-46 |
| MS.gene050612 | MS.gene20817 | 0.87498 | 4.42E-68 | -1.69E-46 |
| MS.gene050647 | MS.gene20817 | -0.822445 | 2.36E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene20817 | 0.855298 | 6.93E-62 | -1.69E-46 |
| MS.gene050699 | MS.gene20817 | 0.854335 | 1.32E-61 | -1.69E-46 |
| MS.gene050747 | MS.gene20817 | 0.872937 | 2.17E-67 | -1.69E-46 |
| MS.gene050772 | MS.gene20817 | 0.848987 | 4.32E-60 | -1.69E-46 |
| MS.gene05080 | MS.gene20817 | 0.852205 | 5.38E-61 | -1.69E-46 |
| MS.gene05081 | MS.gene20817 | 0.844062 | 9.54E-59 | -1.69E-46 |
| MS.gene050868 | MS.gene20817 | 0.883096 | 5.99E-71 | -1.69E-46 |
| MS.gene050871 | MS.gene20817 | 0.880702 | 4.42E-70 | -1.69E-46 |
| MS.gene050876 | MS.gene20817 | 0.878108 | 3.66E-69 | -1.69E-46 |
| MS.gene05087 | MS.gene20817 | 0.810093 | 1.37E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene20817 | 0.946143 | 8.09E-105 | -1.69E-46 |
| MS.gene050950 | MS.gene20817 | 0.870598 | 1.29E-66 | -1.69E-46 |
| MS.gene050986 | MS.gene20817 | 0.858919 | 5.92E-63 | -1.69E-46 |
| MS.gene05100 | MS.gene20817 | 0.808554 | 2.93E-50 | -1.69E-46 |
| MS.gene051138 | MS.gene20817 | -0.813957 | 1.97E-51 | -1.69E-46 |
| MS.gene051268 | MS.gene20817 | 0.847688 | 9.87E-60 | -1.69E-46 |
| MS.gene051317 | MS.gene20817 | 0.89762 | 1.18E-76 | -1.69E-46 |
| MS.gene051364 | MS.gene20817 | -0.816563 | 5.18E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene20817 | -0.814315 | 1.64E-51 | -1.69E-46 |
| MS.gene051367 | MS.gene20817 | -0.801823 | 7.51E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene20817 | 0.807864 | 4.10E-50 | -1.69E-46 |
| MS.gene051651 | MS.gene20817 | -0.810786 | 9.70E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene20817 | 0.803954 | 2.72E-49 | -1.69E-46 |
| MS.gene051694 | MS.gene20817 | 0.819074 | 1.41E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene20817 | 0.806432 | 8.25E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene20817 | 0.856335 | 3.45E-62 | -1.69E-46 |
| MS.gene051858 | MS.gene20817 | 0.821408 | 4.10E-53 | -1.69E-46 |
| MS.gene051874 | MS.gene20817 | 0.818572 | 1.83E-52 | -1.69E-46 |
| MS.gene051941 | MS.gene20817 | 0.851755 | 7.22E-61 | -1.69E-46 |
| MS.gene051949 | MS.gene20817 | 0.804138 | 2.49E-49 | -1.69E-46 |
| MS.gene052129 | MS.gene20817 | -0.805813 | 1.11E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene20817 | 0.854773 | 9.84E-62 | -1.69E-46 |
| MS.gene052482 | MS.gene20817 | 0.87602 | 1.95E-68 | -1.69E-46 |
| MS.gene052486 | MS.gene20817 | 0.894041 | 3.58E-75 | -1.69E-46 |
| MS.gene052494 | MS.gene20817 | -0.822083 | 2.86E-53 | -1.69E-46 |
| MS.gene052501 | MS.gene20817 | 0.80073 | 1.26E-48 | -1.69E-46 |
| MS.gene052503 | MS.gene20817 | 0.849198 | 3.77E-60 | -1.69E-46 |
| MS.gene052506 | MS.gene20817 | 0.81785 | 2.66E-52 | -1.69E-46 |
| MS.gene052606 | MS.gene20817 | -0.824159 | 9.39E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene20817 | 0.829085 | 6.27E-55 | -1.69E-46 |
| MS.gene052822 | MS.gene20817 | 0.823915 | 1.07E-53 | -1.69E-46 |
| MS.gene052823 | MS.gene20817 | 0.843942 | 1.03E-58 | -1.69E-46 |
| MS.gene052825 | MS.gene20817 | 0.848576 | 5.61E-60 | -1.69E-46 |
| MS.gene052870 | MS.gene20817 | 0.826031 | 3.39E-54 | -1.69E-46 |
| MS.gene052872 | MS.gene20817 | 0.842662 | 2.26E-58 | -1.69E-46 |
| MS.gene052966 | MS.gene20817 | 0.894287 | 2.84E-75 | -1.69E-46 |
| MS.gene053097 | MS.gene20817 | -0.810744 | 9.90E-51 | -1.69E-46 |
| MS.gene053117 | MS.gene20817 | 0.81893 | 1.52E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene20817 | 0.86744 | 1.37E-65 | -1.69E-46 |
| MS.gene053207 | MS.gene20817 | 0.818112 | 2.32E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene20817 | 0.83402 | 3.82E-56 | -1.69E-46 |
| MS.gene053284 | MS.gene20817 | 0.812024 | 5.22E-51 | -1.69E-46 |
| MS.gene053285 | MS.gene20817 | 0.801068 | 1.07E-48 | -1.69E-46 |
| MS.gene053286 | MS.gene20817 | 0.832959 | 7.02E-56 | -1.69E-46 |
| MS.gene053420 | MS.gene20817 | -0.82443 | 8.11E-54 | -1.69E-46 |
| MS.gene053421 | MS.gene20817 | -0.822731 | 2.02E-53 | -1.69E-46 |
| MS.gene053436 | MS.gene20817 | 0.824623 | 7.30E-54 | -1.69E-46 |
| MS.gene053479 | MS.gene20817 | 0.874036 | 9.24E-68 | -1.69E-46 |
| MS.gene053480 | MS.gene20817 | 0.867509 | 1.30E-65 | -1.69E-46 |
| MS.gene053574 | MS.gene20817 | 0.832514 | 9.05E-56 | -1.69E-46 |
| MS.gene053579 | MS.gene20817 | 0.809758 | 1.62E-50 | -1.69E-46 |
| MS.gene053626 | MS.gene20817 | 0.811715 | 6.09E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene20817 | 0.812027 | 5.21E-51 | -1.69E-46 |
| MS.gene053633 | MS.gene20817 | 0.805102 | 1.57E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene20817 | 0.891717 | 3.08E-74 | -1.69E-46 |
| MS.gene053916 | MS.gene20817 | 0.804477 | 2.12E-49 | -1.69E-46 |
| MS.gene054107 | MS.gene20817 | 0.803229 | 3.85E-49 | -1.69E-46 |
| MS.gene054344 | MS.gene20817 | 0.84316 | 1.66E-58 | -1.69E-46 |
| MS.gene054408 | MS.gene20817 | 0.874398 | 6.97E-68 | -1.69E-46 |
| MS.gene054595 | MS.gene20817 | 0.849002 | 4.28E-60 | -1.69E-46 |
| MS.gene054600 | MS.gene20817 | 0.864639 | 1.05E-64 | -1.69E-46 |
| MS.gene054642 | MS.gene20817 | 0.825466 | 4.62E-54 | -1.69E-46 |
| MS.gene054706 | MS.gene20817 | -0.821768 | 3.39E-53 | -1.69E-46 |
| MS.gene054707 | MS.gene20817 | -0.803787 | 2.95E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene20817 | 0.885071 | 1.12E-71 | -1.69E-46 |
| MS.gene054884 | MS.gene20817 | -0.805809 | 1.12E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene20817 | 0.801042 | 1.08E-48 | -1.69E-46 |
| MS.gene05494 | MS.gene20817 | 0.832261 | 1.05E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene20817 | 0.864688 | 1.02E-64 | -1.69E-46 |
| MS.gene055158 | MS.gene20817 | -0.83506 | 2.09E-56 | -1.69E-46 |
| MS.gene055206 | MS.gene20817 | 0.825026 | 5.86E-54 | -1.69E-46 |
| MS.gene055224 | MS.gene20817 | 0.849171 | 3.84E-60 | -1.69E-46 |
| MS.gene055362 | MS.gene20817 | 0.860999 | 1.40E-63 | -1.69E-46 |
| MS.gene055502 | MS.gene20817 | 0.875247 | 3.58E-68 | -1.69E-46 |
| MS.gene055577 | MS.gene20817 | 0.888131 | 7.75E-73 | -1.69E-46 |
| MS.gene055741 | MS.gene20817 | 0.828556 | 8.42E-55 | -1.69E-46 |
| MS.gene055744 | MS.gene20817 | 0.813605 | 2.35E-51 | -1.69E-46 |
| MS.gene055748 | MS.gene20817 | 0.899101 | 2.76E-77 | -1.69E-46 |
| MS.gene055750 | MS.gene20817 | 0.888674 | 4.79E-73 | -1.69E-46 |
| MS.gene055751 | MS.gene20817 | 0.900709 | 5.58E-78 | -1.69E-46 |
| MS.gene055776 | MS.gene20817 | 0.807897 | 4.04E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene20817 | 0.911415 | 6.24E-83 | -1.69E-46 |
| MS.gene055941 | MS.gene20817 | 0.856317 | 3.49E-62 | -1.69E-46 |
| MS.gene056040 | MS.gene20817 | 0.82251 | 2.28E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene20817 | 0.823723 | 1.19E-53 | -1.69E-46 |
| MS.gene056283 | MS.gene20817 | 0.82387 | 1.10E-53 | -1.69E-46 |
| MS.gene056387 | MS.gene20817 | 0.852666 | 3.97E-61 | -1.69E-46 |
| MS.gene056409 | MS.gene20817 | 0.847433 | 1.16E-59 | -1.69E-46 |
| MS.gene056446 | MS.gene20817 | 0.811816 | 5.79E-51 | -1.69E-46 |
| MS.gene056449 | MS.gene20817 | 0.838068 | 3.58E-57 | -1.69E-46 |
| MS.gene056450 | MS.gene20817 | 0.848737 | 5.06E-60 | -1.69E-46 |
| MS.gene056504 | MS.gene20817 | 0.900542 | 6.60E-78 | -1.69E-46 |
| MS.gene056510 | MS.gene20817 | 0.867739 | 1.10E-65 | -1.69E-46 |
| MS.gene056549 | MS.gene20817 | 0.828039 | 1.12E-54 | -1.69E-46 |
| MS.gene056610 | MS.gene20817 | 0.844534 | 7.12E-59 | -1.69E-46 |
| MS.gene056618 | MS.gene20817 | -0.826156 | 3.17E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene20817 | 0.846466 | 2.13E-59 | -1.69E-46 |
| MS.gene056692 | MS.gene20817 | 0.891563 | 3.54E-74 | -1.69E-46 |
| MS.gene056694 | MS.gene20817 | -0.809856 | 1.54E-50 | -1.69E-46 |
| MS.gene056898 | MS.gene20817 | 0.800459 | 1.43E-48 | -1.69E-46 |
| MS.gene056903 | MS.gene20817 | 0.80461 | 1.99E-49 | -1.69E-46 |
| MS.gene056946 | MS.gene20817 | 0.809787 | 1.59E-50 | -1.69E-46 |
| MS.gene057019 | MS.gene20817 | 0.821285 | 4.38E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene20817 | 0.812969 | 3.24E-51 | -1.69E-46 |
| MS.gene057332 | MS.gene20817 | 0.828104 | 1.08E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene20817 | 0.807767 | 4.30E-50 | -1.69E-46 |
| MS.gene057658 | MS.gene20817 | 0.859523 | 3.90E-63 | -1.69E-46 |
| MS.gene057768 | MS.gene20817 | -0.813201 | 2.88E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene20817 | 0.897265 | 1.66E-76 | -1.69E-46 |
| MS.gene057857 | MS.gene20817 | 0.816721 | 4.78E-52 | -1.69E-46 |
| MS.gene057872 | MS.gene20817 | 0.814436 | 1.54E-51 | -1.69E-46 |
| MS.gene05787 | MS.gene20817 | 0.852407 | 4.71E-61 | -1.69E-46 |
| MS.gene058120 | MS.gene20817 | 0.800415 | 1.46E-48 | -1.69E-46 |
| MS.gene058130 | MS.gene20817 | 0.814012 | 1.91E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene20817 | 0.843734 | 1.17E-58 | -1.69E-46 |
| MS.gene058171 | MS.gene20817 | -0.805133 | 1.55E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene20817 | -0.808459 | 3.07E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene20817 | -0.853239 | 2.73E-61 | -1.69E-46 |
| MS.gene058335 | MS.gene20817 | 0.831806 | 1.35E-55 | -1.69E-46 |
| MS.gene058338 | MS.gene20817 | 0.83932 | 1.70E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene20817 | 0.908312 | 1.96E-81 | -1.69E-46 |
| MS.gene058418 | MS.gene20817 | -0.81516 | 1.07E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene20817 | 0.860272 | 2.32E-63 | -1.69E-46 |
| MS.gene058544 | MS.gene20817 | 0.848989 | 4.31E-60 | -1.69E-46 |
| MS.gene058603 | MS.gene20817 | -0.80137 | 9.30E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene20817 | 0.871731 | 5.47E-67 | -1.69E-46 |
| MS.gene058838 | MS.gene20817 | 0.879222 | 1.49E-69 | -1.69E-46 |
| MS.gene059022 | MS.gene20817 | 0.864597 | 1.08E-64 | -1.69E-46 |
| MS.gene059023 | MS.gene20817 | 0.917788 | 3.47E-86 | -1.69E-46 |
| MS.gene059079 | MS.gene20817 | 0.83431 | 3.23E-56 | -1.69E-46 |
| MS.gene05912 | MS.gene20817 | 0.867215 | 1.61E-65 | -1.69E-46 |
| MS.gene05914 | MS.gene20817 | 0.842948 | 1.89E-58 | -1.69E-46 |
| MS.gene059303 | MS.gene20817 | 0.808563 | 2.91E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene20817 | 0.83435 | 3.15E-56 | -1.69E-46 |
| MS.gene059367 | MS.gene20817 | 0.800279 | 1.55E-48 | -1.69E-46 |
| MS.gene059526 | MS.gene20817 | -0.857665 | 1.40E-62 | -1.69E-46 |
| MS.gene05960 | MS.gene20817 | -0.820137 | 8.04E-53 | -1.69E-46 |
| MS.gene059667 | MS.gene20817 | 0.832153 | 1.11E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene20817 | 0.871412 | 6.97E-67 | -1.69E-46 |
| MS.gene059718 | MS.gene20817 | 0.86379 | 1.94E-64 | -1.69E-46 |
| MS.gene059756 | MS.gene20817 | 0.86146 | 1.01E-63 | -1.69E-46 |
| MS.gene059801 | MS.gene20817 | 0.880808 | 4.05E-70 | -1.69E-46 |
| MS.gene059837 | MS.gene20817 | 0.85479 | 9.74E-62 | -1.69E-46 |
| MS.gene059865 | MS.gene20817 | 0.84975 | 2.65E-60 | -1.69E-46 |
| MS.gene059902 | MS.gene20817 | 0.812471 | 4.17E-51 | -1.69E-46 |
| MS.gene05996 | MS.gene20817 | 0.806209 | 9.19E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene20817 | 0.904804 | 8.37E-80 | -1.69E-46 |
| MS.gene060187 | MS.gene20817 | -0.806005 | 1.01E-49 | -1.69E-46 |
| MS.gene06027 | MS.gene20817 | 0.820563 | 6.42E-53 | -1.69E-46 |
| MS.gene060593 | MS.gene20817 | -0.81338 | 2.64E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene20817 | -0.856051 | 4.18E-62 | -1.69E-46 |
| MS.gene060703 | MS.gene20817 | 0.852417 | 4.68E-61 | -1.69E-46 |
| MS.gene060762 | MS.gene20817 | 0.904694 | 9.39E-80 | -1.69E-46 |
| MS.gene060778 | MS.gene20817 | 0.873447 | 1.46E-67 | -1.69E-46 |
| MS.gene06077 | MS.gene20817 | 0.907322 | 5.75E-81 | -1.69E-46 |
| MS.gene060823 | MS.gene20817 | -0.814808 | 1.28E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene20817 | 0.801953 | 7.06E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene20817 | 0.853959 | 1.69E-61 | -1.69E-46 |
| MS.gene060982 | MS.gene20817 | 0.896024 | 5.48E-76 | -1.69E-46 |
| MS.gene061044 | MS.gene20817 | -0.829566 | 4.79E-55 | -1.69E-46 |
| MS.gene061150 | MS.gene20817 | 0.862568 | 4.62E-64 | -1.69E-46 |
| MS.gene061231 | MS.gene20817 | 0.844452 | 7.49E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20817.t1 | MTR_1g086940 | 95.812 | 191 | 6 | 1 | 1 | 191 | 1 | 189 | 2.55e-131 | 370 |
| MS.gene20817.t1 | MTR_7g109610 | 74.332 | 187 | 40 | 4 | 10 | 191 | 3 | 186 | 1.53e-88 | 262 |
| MS.gene20817.t1 | MTR_7g082980 | 43.363 | 113 | 51 | 2 | 80 | 191 | 57 | 157 | 7.21e-26 | 101 |
| MS.gene20817.t1 | MTR_4g075100 | 49.398 | 83 | 42 | 0 | 109 | 191 | 41 | 123 | 9.94e-24 | 94.4 |
| MS.gene20817.t1 | MTR_5g026840 | 51.351 | 74 | 36 | 0 | 118 | 191 | 93 | 166 | 6.73e-20 | 85.1 |
| MS.gene20817.t1 | MTR_4g034690 | 36.792 | 106 | 59 | 1 | 86 | 191 | 3 | 100 | 4.39e-19 | 81.3 |
| MS.gene20817.t1 | MTR_4g069800 | 48.684 | 76 | 39 | 0 | 116 | 191 | 102 | 177 | 5.50e-18 | 79.0 |
| MS.gene20817.t1 | MTR_4g069800 | 48.684 | 76 | 39 | 0 | 116 | 191 | 102 | 177 | 8.27e-18 | 79.3 |
| MS.gene20817.t1 | MTR_4g102000 | 30.556 | 180 | 92 | 6 | 11 | 190 | 61 | 207 | 1.15e-16 | 76.6 |
| MS.gene20817.t1 | MTR_4g069800 | 48.571 | 70 | 36 | 0 | 122 | 191 | 76 | 145 | 1.68e-16 | 75.1 |
| MS.gene20817.t1 | MTR_0002s0730 | 33.019 | 106 | 63 | 1 | 86 | 191 | 3 | 100 | 1.62e-14 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20817.t1 | AT1G02560 | 72.396 | 192 | 52 | 1 | 1 | 191 | 1 | 192 | 9.99e-93 | 273 |
| MS.gene20817.t1 | AT5G23140 | 51.807 | 83 | 40 | 0 | 109 | 191 | 44 | 126 | 7.19e-25 | 97.4 |
| MS.gene20817.t1 | AT1G66670 | 53.947 | 76 | 35 | 0 | 116 | 191 | 88 | 163 | 2.56e-23 | 94.7 |
| MS.gene20817.t1 | ATCG00670 | 38.679 | 106 | 57 | 2 | 86 | 191 | 3 | 100 | 8.81e-21 | 85.5 |
| MS.gene20817.t1 | AT5G45390 | 51.282 | 78 | 38 | 0 | 114 | 191 | 80 | 157 | 9.26e-21 | 87.4 |
| MS.gene20817.t1 | AT1G12410 | 41.558 | 77 | 45 | 0 | 114 | 190 | 90 | 166 | 7.39e-17 | 76.6 |
| MS.gene20817.t1 | AT1G11750 | 33.333 | 177 | 105 | 5 | 20 | 191 | 6 | 174 | 6.41e-16 | 73.9 |
| MS.gene20817.t1 | AT1G11750 | 31.771 | 192 | 106 | 5 | 20 | 191 | 6 | 192 | 1.55e-14 | 70.5 |
Find 56 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTGTATGGTGATCAATTT+TGG | 0.210761 | 1.4:+69302470 | MS.gene20817:CDS |
| GTGTTCTTCTAGGGAGGATT+TGG | 0.266446 | 1.4:+69302599 | MS.gene20817:intron |
| GGAGTTCACGTCAGGGTATT+TGG | 0.314629 | 1.4:+69302503 | MS.gene20817:CDS |
| AACGACGGACAAACCTTGTT+TGG | 0.358156 | 1.4:-69302901 | None:intergenic |
| GATCAACAGCATCAAGATAA+AGG | 0.360915 | 1.4:-69302879 | None:intergenic |
| TGTTCTTCTAGGGAGGATTT+GGG | 0.362409 | 1.4:+69302600 | MS.gene20817:intron |
| TGTGCATAGGTAGGAAAATA+AGG | 0.368409 | 1.4:-69302636 | None:intergenic |
| CCTTCGAACTCTTTGCTCTC+CGG | 0.369539 | 1.4:+69301737 | MS.gene20817:CDS |
| GGAAACGCTCCTGCACCATT+GGG | 0.370261 | 1.4:-69302674 | None:intergenic |
| TGGAAACGCTCCTGCACCAT+TGG | 0.372062 | 1.4:-69302675 | None:intergenic |
| CTTCGAACTCTTTGCTCTCC+GGG | 0.395033 | 1.4:+69301738 | MS.gene20817:CDS |
| ACCAGCTGTAACTGATCCTC+CGG | 0.426032 | 1.4:-69303088 | None:intergenic |
| ACCCGAGAGGAGTTCACGTC+AGG | 0.435644 | 1.4:+69302495 | MS.gene20817:CDS |
| AGGAGAGTTGAGTGTAAGAG+AGG | 0.441042 | 1.4:-69301663 | None:intergenic |
| GTTGAGTGTAAGAGAGGAAG+AGG | 0.452445 | 1.4:-69301657 | None:intergenic |
| ATCACCATACACAGCTTTCA+CGG | 0.458968 | 1.4:-69302461 | None:intergenic |
| TTGAGTGTAAGAGAGGAAGA+GGG | 0.464850 | 1.4:-69301656 | None:intergenic |
| GTCAGGGTATTTGGTCCATA+AGG | 0.486578 | 1.4:+69302512 | MS.gene20817:CDS |
| CTGTGATTTGCAGGAAATTG+AGG | 0.490449 | 1.4:+69302401 | MS.gene20817:intron |
| ACCCTGACGTGAACTCCTCT+CGG | 0.491382 | 1.4:-69302497 | None:intergenic |
| TGGCCCTTGTCCTTGTGCAT+AGG | 0.495346 | 1.4:-69302649 | None:intergenic |
| CACTGTCTGTGTTGGATTGG+CGG | 0.498037 | 1.4:+69303286 | MS.gene20817:CDS |
| GTGAGAGTGAGAAGAAGAAC+CGG | 0.507930 | 1.4:-69301702 | None:intergenic |
| AAACGCTCCTGCACCATTGG+GGG | 0.517765 | 1.4:-69302672 | None:intergenic |
| GTCCACTGTCTGTGTTGGAT+TGG | 0.520930 | 1.4:+69303283 | MS.gene20817:CDS |
| TGGAGCAGTTGACGATGATA+TGG | 0.521009 | 1.4:+69302834 | MS.gene20817:CDS |
| ACACAGACAGTGGACACATC+AGG | 0.523363 | 1.4:-69303275 | None:intergenic |
| GAAACGCTCCTGCACCATTG+GGG | 0.523580 | 1.4:-69302673 | None:intergenic |
| TCTGTGTTGGATTGGCGGCT+AGG | 0.523757 | 1.4:+69303291 | MS.gene20817:CDS |
| GATGTGTCCACTGTCTGTGT+TGG | 0.530369 | 1.4:+69303278 | MS.gene20817:CDS |
| TGAGTGTAAGAGAGGAAGAG+GGG | 0.531079 | 1.4:-69301655 | None:intergenic |
| AGAAGAAGAACCGGTGGTGG+GGG | 0.535745 | 1.4:-69301693 | None:intergenic |
| CCCGGAGGATCAGTTACAGC+TGG | 0.538507 | 1.4:+69303087 | MS.gene20817:CDS |
| CCTACCTATGCACAAGGACA+AGG | 0.541580 | 1.4:+69302645 | MS.gene20817:CDS |
| GTGAGAAGAAGAACCGGTGG+TGG | 0.542322 | 1.4:-69301696 | None:intergenic |
| GTCATGTATGTAAATTCTCC+CGG | 0.542326 | 1.4:+69303069 | MS.gene20817:CDS |
| AAAGTTGACTTATAACACTC+TGG | 0.552761 | 1.4:-69302695 | None:intergenic |
| GAGTGTAAGAGAGGAAGAGG+GGG | 0.557336 | 1.4:-69301654 | None:intergenic |
| GTAGGAAAATAAGGCGAAGA+CGG | 0.567411 | 1.4:-69302627 | None:intergenic |
| CCCTGACGTGAACTCCTCTC+GGG | 0.567797 | 1.4:-69302496 | None:intergenic |
| TGAGAAGAAGAACCGGTGGT+GGG | 0.577299 | 1.4:-69301695 | None:intergenic |
| TCTGCCGTGAAAGCTGTGTA+TGG | 0.585170 | 1.4:+69302457 | MS.gene20817:CDS |
| CCTTGTCCTTGTGCATAGGT+AGG | 0.585374 | 1.4:-69302645 | None:intergenic |
| GAGAAGAAGAACCGGTGGTG+GGG | 0.592581 | 1.4:-69301694 | None:intergenic |
| TAGAGAATAATCCGTTGTGG+TGG | 0.606980 | 1.4:+69302814 | MS.gene20817:intron |
| TGATGCTGTTGATCCAAACA+AGG | 0.607848 | 1.4:+69302888 | MS.gene20817:CDS |
| CCCGAGAGGAGTTCACGTCA+GGG | 0.610211 | 1.4:+69302496 | MS.gene20817:CDS |
| CCGGAGAGCAAAGAGTTCGA+AGG | 0.611003 | 1.4:-69301737 | None:intergenic |
| CCAGCTGTAACTGATCCTCC+GGG | 0.618930 | 1.4:-69303087 | None:intergenic |
| CGCCAATCCAACACAGACAG+TGG | 0.626024 | 1.4:-69303285 | None:intergenic |
| TGGCAATATTTGATACAATG+AGG | 0.631433 | 1.4:+69303243 | MS.gene20817:CDS |
| ATTTAGAGAATAATCCGTTG+TGG | 0.633851 | 1.4:+69302811 | MS.gene20817:intron |
| CTACCTATGCACAAGGACAA+GGG | 0.671421 | 1.4:+69302646 | MS.gene20817:CDS |
| CGTCAACTGCTCCACCACAA+CGG | 0.680926 | 1.4:-69302825 | None:intergenic |
| ATGTATGTAAATTCTCCCGG+AGG | 0.710686 | 1.4:+69303072 | MS.gene20817:CDS |
| AGAGTGAGAAGAAGAACCGG+TGG | 0.741682 | 1.4:-69301699 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATGATAAATTTGAAC+TGG | + | chr1.4:69302089-69302108 | MS.gene20817:intron | 15.0% |
| !! | TAAAATTGAGTTAAAAGAAA+AGG | - | chr1.4:69301836-69301855 | None:intergenic | 15.0% |
| !!! | TTATATTTTACTTCTACTAA+GGG | + | chr1.4:69302366-69302385 | MS.gene20817:intron | 15.0% |
| !!! | TTTATATTTTACTTCTACTA+AGG | + | chr1.4:69302365-69302384 | MS.gene20817:intron | 15.0% |
| !! | AAATAGCATAGAATATTCTA+CGG | - | chr1.4:69302345-69302364 | None:intergenic | 20.0% |
| !! | AATAGATTATCAATAATCGA+AGG | - | chr1.4:69302786-69302805 | None:intergenic | 20.0% |
| !! | AGTAAAAAATCCTTACATAT+TGG | - | chr1.4:69302722-69302741 | None:intergenic | 20.0% |
| !! | ATAAAAATAAGAACTTTACC+AGG | - | chr1.4:69301862-69301881 | None:intergenic | 20.0% |
| !! | CTACTAGCAAAATTTAAAAA+GGG | - | chr1.4:69301997-69302016 | None:intergenic | 20.0% |
| !! | TACTAGCAAAATTTAAAAAG+GGG | - | chr1.4:69301996-69302015 | None:intergenic | 20.0% |
| !!! | CTTTTTAAATTTTGCTAGTA+GGG | + | chr1.4:69301996-69302015 | MS.gene20817:intron | 20.0% |
| !!! | TTTAACTCAATTTTAATTCC+TGG | + | chr1.4:69301841-69301860 | MS.gene20817:intron | 20.0% |
| !!! | TTTACTTGTTTCTTTGTTTT+GGG | + | chr1.4:69301948-69301967 | MS.gene20817:intron | 20.0% |
| ! | AATAGCATAGAATATTCTAC+GGG | - | chr1.4:69302344-69302363 | None:intergenic | 25.0% |
| ! | ATTACATGTAGTCTAAACAT+AGG | + | chr1.4:69303160-69303179 | MS.gene20817:intron | 25.0% |
| ! | CCTACTAGCAAAATTTAAAA+AGG | - | chr1.4:69301998-69302017 | None:intergenic | 25.0% |
| ! | GAAAGAAAAATATACATACC+CGG | - | chr1.4:69301759-69301778 | None:intergenic | 25.0% |
| ! | GGATCACTTTATATAGATAA+AGG | - | chr1.4:69302959-69302978 | None:intergenic | 25.0% |
| ! | TTGAAATTGAAGAAAAGACA+AGG | - | chr1.4:69301781-69301800 | None:intergenic | 25.0% |
| ! | TTGAGACAAATGAATAATCT+GGG | + | chr1.4:69302119-69302138 | MS.gene20817:intron | 25.0% |
| ! | TTGAGTTAAAAGAAAAGGTT+AGG | - | chr1.4:69301831-69301850 | None:intergenic | 25.0% |
| ! | TTGATATATGTGTTCTTCTA+GGG | + | chr1.4:69302590-69302609 | MS.gene20817:intron | 25.0% |
| ! | TTTGATCAACTAAAAAACGA+CGG | - | chr1.4:69302919-69302938 | None:intergenic | 25.0% |
| !! | CCTTTTTAAATTTTGCTAGT+AGG | + | chr1.4:69301995-69302014 | MS.gene20817:intron | 25.0% |
| !!! | ATGTAAGGATTTTTTACTCT+TGG | + | chr1.4:69302724-69302743 | MS.gene20817:intron | 25.0% |
| !!! | CTTTCTTTGTTTTTGTTCTT+AGG | + | chr1.4:69303218-69303237 | MS.gene20817:intron | 25.0% |
| !!! | GTTTACTTGTTTCTTTGTTT+TGG | + | chr1.4:69301947-69301966 | MS.gene20817:intron | 25.0% |
| !!! | TTTCTTTGTTTTGGGTTATT+AGG | + | chr1.4:69301956-69301975 | MS.gene20817:intron | 25.0% |
| !!! | TTTGTTTTTGTTCTTAGGTA+TGG | + | chr1.4:69303223-69303242 | MS.gene20817:intron | 25.0% |
| !!! | TTTTTTTCCTTCCAATTTGT+GGG | + | chr1.4:69301905-69301924 | MS.gene20817:intron | 25.0% |
| !!! | TTTTTTTTCCTTCCAATTTG+TGG | + | chr1.4:69301904-69301923 | MS.gene20817:intron | 25.0% |
| AAAACTCAATACCCACAAAT+TGG | - | chr1.4:69301919-69301938 | None:intergenic | 30.0% | |
| AAAGGTTAGGAATAAGTTCA+AGG | - | chr1.4:69301818-69301837 | None:intergenic | 30.0% | |
| AAGGTTAGGAATAAGTTCAA+GGG | - | chr1.4:69301817-69301836 | None:intergenic | 30.0% | |
| ACAAGCAAAAATCTACCTTA+TGG | - | chr1.4:69302530-69302549 | None:intergenic | 30.0% | |
| ACTAGAGCTAATTAATCACT+TGG | - | chr1.4:69302191-69302210 | None:intergenic | 30.0% | |
| ATTTAGAGAATAATCCGTTG+TGG | + | chr1.4:69302811-69302830 | MS.gene20817:intron | 30.0% | |
| CTTGAGACAAATGAATAATC+TGG | + | chr1.4:69302118-69302137 | MS.gene20817:intron | 30.0% | |
| CTTGATATATGTGTTCTTCT+AGG | + | chr1.4:69302589-69302608 | MS.gene20817:intron | 30.0% | |
| TCTTATCTACTATGTTGAAC+AGG | + | chr1.4:69303041-69303060 | MS.gene20817:intron | 30.0% | |
| TGGCAATATTTGATACAATG+AGG | + | chr1.4:69303243-69303262 | MS.gene20817:CDS | 30.0% | |
| ! | AAAGTTGACTTATAACACTC+TGG | - | chr1.4:69302698-69302717 | None:intergenic | 30.0% |
| ! | AAATTTTGCTAGTAGGGTTT+GGG | + | chr1.4:69302002-69302021 | MS.gene20817:intron | 30.0% |
| ! | GTCAACTTTTCCAATATGTA+AGG | + | chr1.4:69302709-69302728 | MS.gene20817:intron | 30.0% |
| ! | TAAATTTTGCTAGTAGGGTT+TGG | + | chr1.4:69302001-69302020 | MS.gene20817:intron | 30.0% |
| ! | TGTGTATGGTGATCAATTTT+GGG | + | chr1.4:69302471-69302490 | MS.gene20817:CDS | 30.0% |
| !! | CAAACACATGCATTTTGATA+TGG | + | chr1.4:69303001-69303020 | MS.gene20817:intron | 30.0% |
| !! | GTGATTAATTAGCTCTAGTT+AGG | + | chr1.4:69302192-69302211 | MS.gene20817:intron | 30.0% |
| ACCAGAAAGTAAGTAAAGTC+TGG | - | chr1.4:69302270-69302289 | None:intergenic | 35.0% | |
| ATAGAATATTCTACGGGAAG+GGG | - | chr1.4:69302338-69302357 | None:intergenic | 35.0% | |
| CATAGAATATTCTACGGGAA+GGG | - | chr1.4:69302339-69302358 | None:intergenic | 35.0% | |
| GACAAATGAATAATCTGGGT+TGG | + | chr1.4:69302123-69302142 | MS.gene20817:intron | 35.0% | |
| GATCAACAGCATCAAGATAA+AGG | - | chr1.4:69302882-69302901 | None:intergenic | 35.0% | |
| GTCATGTATGTAAATTCTCC+CGG | + | chr1.4:69303069-69303088 | MS.gene20817:CDS | 35.0% | |
| TGTGCATAGGTAGGAAAATA+AGG | - | chr1.4:69302639-69302658 | None:intergenic | 35.0% | |
| ! | ATATATGTGTTCTTCTAGGG+AGG | + | chr1.4:69302593-69302612 | MS.gene20817:intron | 35.0% |
| ! | CTGTGTATGGTGATCAATTT+TGG | + | chr1.4:69302470-69302489 | MS.gene20817:CDS | 35.0% |
| ! | GAGAATTTGAGTTCAAATCG+TGG | + | chr1.4:69302228-69302247 | MS.gene20817:intron | 35.0% |
| ! | GTGTATGGTGATCAATTTTG+GGG | + | chr1.4:69302472-69302491 | MS.gene20817:CDS | 35.0% |
| ! | TATTTTCCTACCTATGCACA+AGG | + | chr1.4:69302639-69302658 | MS.gene20817:CDS | 35.0% |
| ! | TGACATCTCTAGAAATGCAA+AGG | - | chr1.4:69302980-69302999 | None:intergenic | 35.0% |
| !! | TTTTAGTTGATCAAAGCTCG+TGG | + | chr1.4:69302924-69302943 | MS.gene20817:intron | 35.0% |
| ATCACCATACACAGCTTTCA+CGG | - | chr1.4:69302464-69302483 | None:intergenic | 40.0% | |
| ATGTATGTAAATTCTCCCGG+AGG | + | chr1.4:69303072-69303091 | MS.gene20817:CDS | 40.0% | |
| ATTTCCTGCAAATCACAGCA+TGG | - | chr1.4:69302399-69302418 | None:intergenic | 40.0% | |
| CTCAATACCCACAAATTGGA+AGG | - | chr1.4:69301915-69301934 | None:intergenic | 40.0% | |
| GCATAGAATATTCTACGGGA+AGG | - | chr1.4:69302340-69302359 | None:intergenic | 40.0% | |
| GCCAGACTTTACTTACTTTC+TGG | + | chr1.4:69302266-69302285 | MS.gene20817:intron | 40.0% | |
| GTAGGAAAATAAGGCGAAGA+CGG | - | chr1.4:69302630-69302649 | None:intergenic | 40.0% | |
| TAGAATATTCTACGGGAAGG+GGG | - | chr1.4:69302337-69302356 | None:intergenic | 40.0% | |
| TAGAGAATAATCCGTTGTGG+TGG | + | chr1.4:69302814-69302833 | MS.gene20817:intron | 40.0% | |
| TGATGCTGTTGATCCAAACA+AGG | + | chr1.4:69302888-69302907 | MS.gene20817:CDS | 40.0% | |
| TTGAGTGTAAGAGAGGAAGA+GGG | - | chr1.4:69301659-69301678 | None:intergenic | 40.0% | |
| ! | AAAACCATGCTGTGATTTGC+AGG | + | chr1.4:69302392-69302411 | MS.gene20817:intron | 40.0% |
| ! | CTGTGATTTGCAGGAAATTG+AGG | + | chr1.4:69302401-69302420 | MS.gene20817:intron | 40.0% |
| ! | TGTTCTTCTAGGGAGGATTT+GGG | + | chr1.4:69302600-69302619 | MS.gene20817:intron | 40.0% |
| AACGACGGACAAACCTTGTT+TGG | - | chr1.4:69302904-69302923 | None:intergenic | 45.0% | |
| AGGAGAGTTGAGTGTAAGAG+AGG | - | chr1.4:69301666-69301685 | None:intergenic | 45.0% | |
| CTACCTATGCACAAGGACAA+GGG | + | chr1.4:69302646-69302665 | MS.gene20817:CDS | 45.0% | |
| GGTTGAACTCCAAATTACCG+AGG | + | chr1.4:69302287-69302306 | MS.gene20817:intron | 45.0% | |
| GTGAGAGTGAGAAGAAGAAC+CGG | - | chr1.4:69301705-69301724 | None:intergenic | 45.0% | |
| GTTGAGTGTAAGAGAGGAAG+AGG | - | chr1.4:69301660-69301679 | None:intergenic | 45.0% | |
| TGAGTGTAAGAGAGGAAGAG+GGG | - | chr1.4:69301658-69301677 | None:intergenic | 45.0% | |
| TGGAGCAGTTGACGATGATA+TGG | + | chr1.4:69302834-69302853 | MS.gene20817:CDS | 45.0% | |
| ! | AGCTTTCACGGCAGATTTTC+GGG | - | chr1.4:69302452-69302471 | None:intergenic | 45.0% |
| ! | CAGCTTTCACGGCAGATTTT+CGG | - | chr1.4:69302453-69302472 | None:intergenic | 45.0% |
| ! | GTCAGGGTATTTGGTCCATA+AGG | + | chr1.4:69302512-69302531 | MS.gene20817:CDS | 45.0% |
| ! | GTGTTCTTCTAGGGAGGATT+TGG | + | chr1.4:69302599-69302618 | MS.gene20817:intron | 45.0% |
| ACACAGACAGTGGACACATC+AGG | - | chr1.4:69303278-69303297 | None:intergenic | 50.0% | |
| ACCAGCTGTAACTGATCCTC+CGG | - | chr1.4:69303091-69303110 | None:intergenic | 50.0% | |
| AGAGTGAGAAGAAGAACCGG+TGG | - | chr1.4:69301702-69301721 | None:intergenic | 50.0% | |
| ATTACCGAGGTTTCCTCCCT+CGG | + | chr1.4:69302300-69302319 | MS.gene20817:intron | 50.0% | |
| CCTACCTATGCACAAGGACA+AGG | + | chr1.4:69302645-69302664 | MS.gene20817:CDS | 50.0% | |
| CCTTCGAACTCTTTGCTCTC+CGG | + | chr1.4:69301737-69301756 | MS.gene20817:CDS | 50.0% | |
| CCTTGTCCTTGTGCATAGGT+AGG | - | chr1.4:69302648-69302667 | None:intergenic | 50.0% | |
| CTTCGAACTCTTTGCTCTCC+GGG | + | chr1.4:69301738-69301757 | MS.gene20817:CDS | 50.0% | |
| GAGTGTAAGAGAGGAAGAGG+GGG | - | chr1.4:69301657-69301676 | None:intergenic | 50.0% | |
| GATGTGTCCACTGTCTGTGT+TGG | + | chr1.4:69303278-69303297 | MS.gene20817:CDS | 50.0% | |
| GGGAGGAAACCTCGGTAATT+TGG | - | chr1.4:69302299-69302318 | None:intergenic | 50.0% | |
| GTCCACTGTCTGTGTTGGAT+TGG | + | chr1.4:69303283-69303302 | MS.gene20817:CDS | 50.0% | |
| TCTGCCGTGAAAGCTGTGTA+TGG | + | chr1.4:69302457-69302476 | MS.gene20817:CDS | 50.0% | |
| TGAGAAGAAGAACCGGTGGT+GGG | - | chr1.4:69301698-69301717 | None:intergenic | 50.0% | |
| ! | CACTGTCTGTGTTGGATTGG+CGG | + | chr1.4:69303286-69303305 | MS.gene20817:CDS | 50.0% |
| ! | GGAGTTCACGTCAGGGTATT+TGG | + | chr1.4:69302503-69302522 | MS.gene20817:CDS | 50.0% |
| !! | ATCAATTTTGGGGACCCGAG+AGG | + | chr1.4:69302482-69302501 | MS.gene20817:CDS | 50.0% |
| AAACGCTCCTGCACCATTGG+GGG | - | chr1.4:69302675-69302694 | None:intergenic | 55.0% | |
| ACCCTGACGTGAACTCCTCT+CGG | - | chr1.4:69302500-69302519 | None:intergenic | 55.0% | |
| CCAGCTGTAACTGATCCTCC+GGG | - | chr1.4:69303090-69303109 | None:intergenic | 55.0% | |
| CCGGAGAGCAAAGAGTTCGA+AGG | - | chr1.4:69301740-69301759 | None:intergenic | 55.0% | |
| CGCCAATCCAACACAGACAG+TGG | - | chr1.4:69303288-69303307 | None:intergenic | 55.0% | |
| CGTCAACTGCTCCACCACAA+CGG | - | chr1.4:69302828-69302847 | None:intergenic | 55.0% | |
| GAAACGCTCCTGCACCATTG+GGG | - | chr1.4:69302676-69302695 | None:intergenic | 55.0% | |
| GAGAAGAAGAACCGGTGGTG+GGG | - | chr1.4:69301697-69301716 | None:intergenic | 55.0% | |
| GGAAACGCTCCTGCACCATT+GGG | - | chr1.4:69302677-69302696 | None:intergenic | 55.0% | |
| GTGAGAAGAAGAACCGGTGG+TGG | - | chr1.4:69301699-69301718 | None:intergenic | 55.0% | |
| TGGAAACGCTCCTGCACCAT+TGG | - | chr1.4:69302678-69302697 | None:intergenic | 55.0% | |
| TGGCCCTTGTCCTTGTGCAT+AGG | - | chr1.4:69302652-69302671 | None:intergenic | 55.0% | |
| TTACCGAGGTTTCCTCCCTC+GGG | + | chr1.4:69302301-69302320 | MS.gene20817:intron | 55.0% | |
| ! | AGAAGAAGAACCGGTGGTGG+GGG | - | chr1.4:69301696-69301715 | None:intergenic | 55.0% |
| !! | TCTGTGTTGGATTGGCGGCT+AGG | + | chr1.4:69303291-69303310 | MS.gene20817:CDS | 55.0% |
| ACCCGAGAGGAGTTCACGTC+AGG | + | chr1.4:69302495-69302514 | MS.gene20817:CDS | 60.0% | |
| CCCGAGAGGAGTTCACGTCA+GGG | + | chr1.4:69302496-69302515 | MS.gene20817:CDS | 60.0% | |
| CCCGGAGGATCAGTTACAGC+TGG | + | chr1.4:69303087-69303106 | MS.gene20817:CDS | 60.0% | |
| CCCTGACGTGAACTCCTCTC+GGG | - | chr1.4:69302499-69302518 | None:intergenic | 60.0% | |
| CCTCTTCTTTCCCCCACCAC+CGG | + | chr1.4:69301683-69301702 | MS.gene20817:CDS | 60.0% | |
| TACCGAGGTTTCCTCCCTCG+GGG | + | chr1.4:69302302-69302321 | MS.gene20817:intron | 60.0% | |
| AGGACAAGGGCCACCCCCAA+TGG | + | chr1.4:69302659-69302678 | MS.gene20817:CDS | 65.0% | |
| CTACGGGAAGGGGGTCCTTC+AGG | - | chr1.4:69302328-69302347 | None:intergenic | 65.0% | |
| TTTCCTCCCTCGGGGCCTGA+AGG | + | chr1.4:69302310-69302329 | MS.gene20817:intron | 65.0% | |
| !! | CCGGTGGTGGGGGAAAGAAG+AGG | - | chr1.4:69301686-69301705 | None:intergenic | 65.0% |
| AGGGCCACCCCCAATGGTGC+AGG | + | chr1.4:69302665-69302684 | MS.gene20817:CDS | 70.0% | |
| CGCTCCTGCACCATTGGGGG+TGG | - | chr1.4:69302672-69302691 | None:intergenic | 70.0% | |
| GGCCCCGAGGGAGGAAACCT+CGG | - | chr1.4:69302307-69302326 | None:intergenic | 70.0% | |
| AGGGGGTCCTTCAGGCCCCG+AGG | - | chr1.4:69302320-69302339 | None:intergenic | 75.0% | |
| GGGGGTCCTTCAGGCCCCGA+GGG | - | chr1.4:69302319-69302338 | None:intergenic | 75.0% | |
| GGTCCTTCAGGCCCCGAGGG+AGG | - | chr1.4:69302316-69302335 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 69301632 | 69303316 | 69301632 | ID=MS.gene20817 |
| chr1.4 | mRNA | 69301632 | 69303316 | 69301632 | ID=MS.gene20817.t1;Parent=MS.gene20817 |
| chr1.4 | exon | 69301632 | 69301759 | 69301632 | ID=MS.gene20817.t1.exon1;Parent=MS.gene20817.t1 |
| chr1.4 | CDS | 69301632 | 69301759 | 69301632 | ID=cds.MS.gene20817.t1;Parent=MS.gene20817.t1 |
| chr1.4 | exon | 69302414 | 69302533 | 69302414 | ID=MS.gene20817.t1.exon2;Parent=MS.gene20817.t1 |
| chr1.4 | CDS | 69302414 | 69302533 | 69302414 | ID=cds.MS.gene20817.t1;Parent=MS.gene20817.t1 |
| chr1.4 | exon | 69302611 | 69302725 | 69302611 | ID=MS.gene20817.t1.exon3;Parent=MS.gene20817.t1 |
| chr1.4 | CDS | 69302611 | 69302725 | 69302611 | ID=cds.MS.gene20817.t1;Parent=MS.gene20817.t1 |
| chr1.4 | exon | 69302817 | 69302909 | 69302817 | ID=MS.gene20817.t1.exon4;Parent=MS.gene20817.t1 |
| chr1.4 | CDS | 69302817 | 69302909 | 69302817 | ID=cds.MS.gene20817.t1;Parent=MS.gene20817.t1 |
| chr1.4 | exon | 69303063 | 69303108 | 69303063 | ID=MS.gene20817.t1.exon5;Parent=MS.gene20817.t1 |
| chr1.4 | CDS | 69303063 | 69303108 | 69303063 | ID=cds.MS.gene20817.t1;Parent=MS.gene20817.t1 |
| chr1.4 | exon | 69303240 | 69303316 | 69303240 | ID=MS.gene20817.t1.exon6;Parent=MS.gene20817.t1 |
| chr1.4 | CDS | 69303240 | 69303316 | 69303240 | ID=cds.MS.gene20817.t1;Parent=MS.gene20817.t1 |
| Gene Sequence |
| Protein sequence |
