Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56518.t1 | XP_013456761.1 | 98 | 490 | 10 | 0 | 1 | 490 | 1 | 490 | 6.30E-278 | 966.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56518.t1 | Q43088 | 89.0 | 490 | 53 | 1 | 1 | 490 | 1 | 489 | 9.9e-256 | 883.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56518.t1 | A0A072UM69 | 98.0 | 490 | 10 | 0 | 1 | 490 | 1 | 490 | 4.5e-278 | 966.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene56518.t1 | TR | SET |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene56518 | 0.877148 | 7.93E-69 | -1.69E-46 |
| MS.gene049171 | MS.gene56518 | 0.879898 | 8.55E-70 | -1.69E-46 |
| MS.gene049217 | MS.gene56518 | 0.836151 | 1.11E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene56518 | 0.898202 | 6.68E-77 | -1.69E-46 |
| MS.gene049232 | MS.gene56518 | 0.822598 | 2.17E-53 | -1.69E-46 |
| MS.gene049257 | MS.gene56518 | 0.800715 | 1.27E-48 | -1.69E-46 |
| MS.gene049285 | MS.gene56518 | 0.875089 | 4.05E-68 | -1.69E-46 |
| MS.gene049320 | MS.gene56518 | 0.847853 | 8.89E-60 | -1.69E-46 |
| MS.gene049427 | MS.gene56518 | 0.877106 | 8.20E-69 | -1.69E-46 |
| MS.gene049609 | MS.gene56518 | 0.874341 | 7.29E-68 | -1.69E-46 |
| MS.gene049615 | MS.gene56518 | 0.833132 | 6.36E-56 | -1.69E-46 |
| MS.gene049627 | MS.gene56518 | 0.861456 | 1.01E-63 | -1.69E-46 |
| MS.gene049633 | MS.gene56518 | 0.839262 | 1.76E-57 | -1.69E-46 |
| MS.gene049805 | MS.gene56518 | 0.875081 | 4.08E-68 | -1.69E-46 |
| MS.gene05010 | MS.gene56518 | 0.809789 | 1.59E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene56518 | 0.86836 | 6.92E-66 | -1.69E-46 |
| MS.gene050165 | MS.gene56518 | 0.837346 | 5.49E-57 | -1.69E-46 |
| MS.gene050170 | MS.gene56518 | 0.818464 | 1.93E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene56518 | 0.812288 | 4.57E-51 | -1.69E-46 |
| MS.gene050333 | MS.gene56518 | 0.824451 | 8.02E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene56518 | 0.868627 | 5.67E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene56518 | 0.849305 | 3.52E-60 | -1.69E-46 |
| MS.gene050538 | MS.gene56518 | 0.843983 | 1.00E-58 | -1.69E-46 |
| MS.gene050577 | MS.gene56518 | 0.877911 | 4.30E-69 | -1.69E-46 |
| MS.gene050593 | MS.gene56518 | 0.884343 | 2.08E-71 | -1.69E-46 |
| MS.gene050612 | MS.gene56518 | 0.821117 | 4.79E-53 | -1.69E-46 |
| MS.gene050647 | MS.gene56518 | -0.816299 | 5.94E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene56518 | 0.81375 | 2.18E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene56518 | 0.824261 | 8.88E-54 | -1.69E-46 |
| MS.gene050699 | MS.gene56518 | 0.853562 | 2.20E-61 | -1.69E-46 |
| MS.gene050747 | MS.gene56518 | 0.932176 | 1.26E-94 | -1.69E-46 |
| MS.gene050772 | MS.gene56518 | 0.868278 | 7.35E-66 | -1.69E-46 |
| MS.gene050781 | MS.gene56518 | 0.869112 | 3.95E-66 | -1.69E-46 |
| MS.gene050783 | MS.gene56518 | 0.831403 | 1.70E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene56518 | 0.829457 | 5.09E-55 | -1.69E-46 |
| MS.gene050812 | MS.gene56518 | 0.810938 | 8.99E-51 | -1.69E-46 |
| MS.gene05081 | MS.gene56518 | 0.801782 | 7.66E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene56518 | 0.827929 | 1.19E-54 | -1.69E-46 |
| MS.gene050871 | MS.gene56518 | 0.828182 | 1.04E-54 | -1.69E-46 |
| MS.gene050904 | MS.gene56518 | 0.809092 | 2.25E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene56518 | 0.931395 | 4.03E-94 | -1.69E-46 |
| MS.gene050986 | MS.gene56518 | 0.837456 | 5.14E-57 | -1.69E-46 |
| MS.gene05100 | MS.gene56518 | 0.857759 | 1.31E-62 | -1.69E-46 |
| MS.gene051167 | MS.gene56518 | -0.804366 | 2.24E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene56518 | 0.804588 | 2.01E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene56518 | 0.87658 | 1.25E-68 | -1.69E-46 |
| MS.gene051525 | MS.gene56518 | 0.803078 | 4.14E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene56518 | 0.846386 | 2.24E-59 | -1.69E-46 |
| MS.gene051582 | MS.gene56518 | 0.809966 | 1.46E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene56518 | 0.887547 | 1.30E-72 | -1.69E-46 |
| MS.gene051692 | MS.gene56518 | 0.806696 | 7.26E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene56518 | 0.891311 | 4.46E-74 | -1.69E-46 |
| MS.gene051838 | MS.gene56518 | 0.836477 | 9.15E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene56518 | 0.824713 | 6.96E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene56518 | 0.861748 | 8.25E-64 | -1.69E-46 |
| MS.gene052271 | MS.gene56518 | 0.800925 | 1.15E-48 | -1.69E-46 |
| MS.gene052322 | MS.gene56518 | 0.82382 | 1.13E-53 | -1.69E-46 |
| MS.gene052379 | MS.gene56518 | 0.815607 | 8.48E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene56518 | 0.854711 | 1.03E-61 | -1.69E-46 |
| MS.gene052481 | MS.gene56518 | 0.832394 | 9.69E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene56518 | 0.833855 | 4.20E-56 | -1.69E-46 |
| MS.gene052484 | MS.gene56518 | 0.810468 | 1.14E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene56518 | 0.839656 | 1.39E-57 | -1.69E-46 |
| MS.gene052501 | MS.gene56518 | 0.87615 | 1.76E-68 | -1.69E-46 |
| MS.gene052503 | MS.gene56518 | 0.883203 | 5.47E-71 | -1.69E-46 |
| MS.gene052505 | MS.gene56518 | 0.870208 | 1.74E-66 | -1.69E-46 |
| MS.gene052506 | MS.gene56518 | 0.830024 | 3.71E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene56518 | 0.862247 | 5.80E-64 | -1.69E-46 |
| MS.gene052820 | MS.gene56518 | 0.810634 | 1.05E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene56518 | 0.823851 | 1.11E-53 | -1.69E-46 |
| MS.gene052823 | MS.gene56518 | 0.882446 | 1.03E-70 | -1.69E-46 |
| MS.gene052825 | MS.gene56518 | 0.880784 | 4.13E-70 | -1.69E-46 |
| MS.gene052966 | MS.gene56518 | 0.836408 | 9.52E-57 | -1.69E-46 |
| MS.gene052982 | MS.gene56518 | 0.856407 | 3.29E-62 | -1.69E-46 |
| MS.gene053104 | MS.gene56518 | 0.806509 | 7.95E-50 | -1.69E-46 |
| MS.gene053107 | MS.gene56518 | 0.854904 | 9.02E-62 | -1.69E-46 |
| MS.gene053203 | MS.gene56518 | 0.898684 | 4.17E-77 | -1.69E-46 |
| MS.gene053207 | MS.gene56518 | 0.85894 | 5.83E-63 | -1.69E-46 |
| MS.gene053213 | MS.gene56518 | 0.901054 | 3.95E-78 | -1.69E-46 |
| MS.gene053286 | MS.gene56518 | 0.894464 | 2.41E-75 | -1.69E-46 |
| MS.gene053322 | MS.gene56518 | 0.847408 | 1.18E-59 | -1.69E-46 |
| MS.gene053436 | MS.gene56518 | 0.889886 | 1.62E-73 | -1.69E-46 |
| MS.gene053479 | MS.gene56518 | 0.808739 | 2.67E-50 | -1.69E-46 |
| MS.gene053480 | MS.gene56518 | 0.804094 | 2.55E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene56518 | 0.879299 | 1.40E-69 | -1.69E-46 |
| MS.gene053579 | MS.gene56518 | 0.861674 | 8.69E-64 | -1.69E-46 |
| MS.gene053626 | MS.gene56518 | 0.853467 | 2.34E-61 | -1.69E-46 |
| MS.gene053632 | MS.gene56518 | 0.841059 | 5.98E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene56518 | 0.839604 | 1.43E-57 | -1.69E-46 |
| MS.gene054408 | MS.gene56518 | 0.89049 | 9.40E-74 | -1.69E-46 |
| MS.gene054595 | MS.gene56518 | 0.866159 | 3.49E-65 | -1.69E-46 |
| MS.gene054600 | MS.gene56518 | 0.850632 | 1.50E-60 | -1.69E-46 |
| MS.gene054642 | MS.gene56518 | 0.856486 | 3.11E-62 | -1.69E-46 |
| MS.gene05470 | MS.gene56518 | 0.873674 | 1.22E-67 | -1.69E-46 |
| MS.gene054884 | MS.gene56518 | -0.813461 | 2.53E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene56518 | 0.870164 | 1.79E-66 | -1.69E-46 |
| MS.gene054954 | MS.gene56518 | 0.847077 | 1.45E-59 | -1.69E-46 |
| MS.gene05505 | MS.gene56518 | 0.834801 | 2.43E-56 | -1.69E-46 |
| MS.gene055206 | MS.gene56518 | 0.838215 | 3.28E-57 | -1.69E-46 |
| MS.gene055224 | MS.gene56518 | 0.825579 | 4.34E-54 | -1.69E-46 |
| MS.gene055289 | MS.gene56518 | 0.834353 | 3.15E-56 | -1.69E-46 |
| MS.gene055362 | MS.gene56518 | 0.866911 | 2.02E-65 | -1.69E-46 |
| MS.gene055412 | MS.gene56518 | 0.821874 | 3.20E-53 | -1.69E-46 |
| MS.gene055499 | MS.gene56518 | 0.824262 | 8.88E-54 | -1.69E-46 |
| MS.gene055502 | MS.gene56518 | 0.869585 | 2.77E-66 | -1.69E-46 |
| MS.gene055577 | MS.gene56518 | 0.869143 | 3.86E-66 | -1.69E-46 |
| MS.gene055629 | MS.gene56518 | 0.825753 | 3.95E-54 | -1.69E-46 |
| MS.gene055647 | MS.gene56518 | 0.838189 | 3.33E-57 | -1.69E-46 |
| MS.gene055722 | MS.gene56518 | 0.840696 | 7.44E-58 | -1.69E-46 |
| MS.gene055748 | MS.gene56518 | 0.840473 | 8.51E-58 | -1.69E-46 |
| MS.gene055750 | MS.gene56518 | 0.824959 | 6.08E-54 | -1.69E-46 |
| MS.gene055751 | MS.gene56518 | 0.819443 | 1.16E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene56518 | 0.826329 | 2.88E-54 | -1.69E-46 |
| MS.gene055941 | MS.gene56518 | 0.858144 | 1.01E-62 | -1.69E-46 |
| MS.gene056040 | MS.gene56518 | 0.871163 | 8.43E-67 | -1.69E-46 |
| MS.gene056083 | MS.gene56518 | 0.882581 | 9.24E-71 | -1.69E-46 |
| MS.gene056166 | MS.gene56518 | 0.847907 | 8.59E-60 | -1.69E-46 |
| MS.gene056263 | MS.gene56518 | 0.821144 | 4.72E-53 | -1.69E-46 |
| MS.gene056374 | MS.gene56518 | 0.860732 | 1.68E-63 | -1.69E-46 |
| MS.gene056409 | MS.gene56518 | 0.831773 | 1.38E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene56518 | 0.83664 | 8.31E-57 | -1.69E-46 |
| MS.gene056510 | MS.gene56518 | 0.845506 | 3.89E-59 | -1.69E-46 |
| MS.gene056549 | MS.gene56518 | 0.825846 | 3.75E-54 | -1.69E-46 |
| MS.gene056550 | MS.gene56518 | -0.800151 | 1.65E-48 | -1.69E-46 |
| MS.gene056610 | MS.gene56518 | 0.858562 | 7.57E-63 | -1.69E-46 |
| MS.gene05664 | MS.gene56518 | 0.802379 | 5.77E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene56518 | 0.852653 | 4.01E-61 | -1.69E-46 |
| MS.gene05666 | MS.gene56518 | 0.821658 | 3.59E-53 | -1.69E-46 |
| MS.gene056692 | MS.gene56518 | 0.861363 | 1.08E-63 | -1.69E-46 |
| MS.gene056877 | MS.gene56518 | 0.843068 | 1.76E-58 | -1.69E-46 |
| MS.gene056897 | MS.gene56518 | 0.813798 | 2.13E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene56518 | 0.866794 | 2.20E-65 | -1.69E-46 |
| MS.gene057048 | MS.gene56518 | 0.812026 | 5.21E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene56518 | 0.825372 | 4.86E-54 | -1.69E-46 |
| MS.gene057146 | MS.gene56518 | 0.850873 | 1.28E-60 | -1.69E-46 |
| MS.gene057196 | MS.gene56518 | 0.814087 | 1.84E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene56518 | 0.84545 | 4.03E-59 | -1.69E-46 |
| MS.gene057332 | MS.gene56518 | 0.815261 | 1.01E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene56518 | 0.905671 | 3.35E-80 | -1.69E-46 |
| MS.gene057658 | MS.gene56518 | 0.88898 | 3.65E-73 | -1.69E-46 |
| MS.gene057734 | MS.gene56518 | 0.812691 | 3.73E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene56518 | 0.87268 | 2.64E-67 | -1.69E-46 |
| MS.gene057856 | MS.gene56518 | 0.834521 | 2.86E-56 | -1.69E-46 |
| MS.gene05787 | MS.gene56518 | 0.829403 | 5.25E-55 | -1.69E-46 |
| MS.gene058019 | MS.gene56518 | 0.876636 | 1.19E-68 | -1.69E-46 |
| MS.gene058130 | MS.gene56518 | 0.807825 | 4.18E-50 | -1.69E-46 |
| MS.gene058323 | MS.gene56518 | 0.84546 | 4.01E-59 | -1.69E-46 |
| MS.gene058334 | MS.gene56518 | -0.801786 | 7.64E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene56518 | 0.819434 | 1.16E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene56518 | 0.863276 | 2.79E-64 | -1.69E-46 |
| MS.gene058419 | MS.gene56518 | 0.87015 | 1.81E-66 | -1.69E-46 |
| MS.gene058444 | MS.gene56518 | 0.821458 | 4.00E-53 | -1.69E-46 |
| MS.gene058544 | MS.gene56518 | 0.906935 | 8.71E-81 | -1.69E-46 |
| MS.gene058700 | MS.gene56518 | 0.83374 | 4.48E-56 | -1.69E-46 |
| MS.gene058773 | MS.gene56518 | 0.84374 | 1.16E-58 | -1.69E-46 |
| MS.gene058838 | MS.gene56518 | 0.880549 | 5.01E-70 | -1.69E-46 |
| MS.gene05883 | MS.gene56518 | 0.907965 | 2.86E-81 | -1.69E-46 |
| MS.gene059022 | MS.gene56518 | 0.84622 | 2.49E-59 | -1.69E-46 |
| MS.gene059023 | MS.gene56518 | 0.874629 | 5.81E-68 | -1.69E-46 |
| MS.gene059103 | MS.gene56518 | -0.801755 | 7.75E-49 | -1.69E-46 |
| MS.gene059141 | MS.gene56518 | 0.800634 | 1.31E-48 | -1.69E-46 |
| MS.gene05914 | MS.gene56518 | 0.836842 | 7.38E-57 | -1.69E-46 |
| MS.gene059181 | MS.gene56518 | 0.819924 | 8.99E-53 | -1.69E-46 |
| MS.gene059303 | MS.gene56518 | 0.807052 | 6.10E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene56518 | 0.873162 | 1.82E-67 | -1.69E-46 |
| MS.gene059480 | MS.gene56518 | -0.80006 | 1.72E-48 | -1.69E-46 |
| MS.gene059536 | MS.gene56518 | 0.880254 | 6.39E-70 | -1.69E-46 |
| MS.gene059667 | MS.gene56518 | 0.816639 | 4.98E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene56518 | 0.862569 | 4.62E-64 | -1.69E-46 |
| MS.gene059718 | MS.gene56518 | 0.887762 | 1.07E-72 | -1.69E-46 |
| MS.gene059756 | MS.gene56518 | 0.878449 | 2.78E-69 | -1.69E-46 |
| MS.gene059801 | MS.gene56518 | 0.854942 | 8.79E-62 | -1.69E-46 |
| MS.gene059865 | MS.gene56518 | 0.823697 | 1.20E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene56518 | 0.824493 | 7.83E-54 | -1.69E-46 |
| MS.gene059960 | MS.gene56518 | 0.846211 | 2.50E-59 | -1.69E-46 |
| MS.gene06000 | MS.gene56518 | 0.817638 | 2.97E-52 | -1.69E-46 |
| MS.gene060193 | MS.gene56518 | 0.802976 | 4.35E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene56518 | 0.831034 | 2.10E-55 | -1.69E-46 |
| MS.gene060482 | MS.gene56518 | 0.825951 | 3.54E-54 | -1.69E-46 |
| MS.gene060485 | MS.gene56518 | 0.80065 | 1.30E-48 | -1.69E-46 |
| MS.gene060762 | MS.gene56518 | 0.871645 | 5.84E-67 | -1.69E-46 |
| MS.gene06077 | MS.gene56518 | 0.886845 | 2.40E-72 | -1.69E-46 |
| MS.gene060804 | MS.gene56518 | 0.821015 | 5.06E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene56518 | 0.826663 | 2.40E-54 | -1.69E-46 |
| MS.gene060837 | MS.gene56518 | 0.805891 | 1.07E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene56518 | 0.902239 | 1.19E-78 | -1.69E-46 |
| MS.gene060982 | MS.gene56518 | 0.832171 | 1.10E-55 | -1.69E-46 |
| MS.gene061150 | MS.gene56518 | 0.911186 | 8.09E-83 | -1.69E-46 |
| MS.gene061171 | MS.gene56518 | 0.814348 | 1.61E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene56518 | 0.851636 | 7.80E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56518.t1 | MTR_4g082305 | 97.959 | 490 | 10 | 0 | 1 | 490 | 1 | 490 | 0.0 | 990 |
| MS.gene56518.t1 | MTR_4g082305 | 97.535 | 284 | 7 | 0 | 1 | 284 | 1 | 284 | 0.0 | 572 |
| MS.gene56518.t1 | MTR_3g082690 | 26.797 | 459 | 291 | 20 | 37 | 473 | 43 | 478 | 4.61e-25 | 108 |
| MS.gene56518.t1 | MTR_1g115980 | 27.891 | 294 | 175 | 10 | 54 | 334 | 33 | 302 | 1.39e-17 | 84.7 |
| MS.gene56518.t1 | MTR_1g115980 | 27.891 | 294 | 175 | 10 | 54 | 334 | 33 | 302 | 1.42e-17 | 84.7 |
| MS.gene56518.t1 | MTR_1g115980 | 27.891 | 294 | 175 | 10 | 54 | 334 | 33 | 302 | 1.71e-17 | 84.7 |
| MS.gene56518.t1 | MTR_1g115980 | 27.891 | 294 | 175 | 10 | 54 | 334 | 33 | 302 | 1.91e-17 | 84.7 |
| MS.gene56518.t1 | MTR_1g115980 | 27.891 | 294 | 175 | 10 | 54 | 334 | 33 | 302 | 1.92e-17 | 85.1 |
| MS.gene56518.t1 | MTR_1g115980 | 27.891 | 294 | 175 | 10 | 54 | 334 | 33 | 302 | 2.56e-17 | 84.7 |
| MS.gene56518.t1 | MTR_7g076590 | 29.412 | 323 | 150 | 13 | 55 | 311 | 8 | 318 | 4.77e-15 | 78.2 |
| MS.gene56518.t1 | MTR_1g077040 | 30.052 | 193 | 121 | 6 | 60 | 244 | 11 | 197 | 7.76e-13 | 70.9 |
| MS.gene56518.t1 | MTR_6g023320 | 24.171 | 422 | 261 | 17 | 61 | 446 | 73 | 471 | 3.32e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56518.t1 | AT1G14030 | 64.286 | 462 | 156 | 3 | 23 | 483 | 24 | 477 | 0.0 | 610 |
| MS.gene56518.t1 | AT3G07670 | 29.618 | 314 | 197 | 13 | 44 | 346 | 63 | 363 | 1.11e-22 | 101 |
| MS.gene56518.t1 | AT4G20130 | 25.814 | 430 | 234 | 17 | 80 | 470 | 99 | 482 | 4.83e-18 | 87.0 |
| MS.gene56518.t1 | AT3G07670 | 31.441 | 229 | 137 | 10 | 126 | 346 | 9 | 225 | 1.04e-17 | 85.1 |
| MS.gene56518.t1 | AT3G55080 | 25.070 | 355 | 228 | 12 | 4 | 349 | 2 | 327 | 6.15e-17 | 83.6 |
| MS.gene56518.t1 | AT4G20130 | 25.779 | 353 | 195 | 12 | 139 | 470 | 57 | 363 | 4.92e-15 | 77.0 |
| MS.gene56518.t1 | AT4G20130 | 25.779 | 353 | 195 | 12 | 139 | 470 | 57 | 363 | 4.92e-15 | 77.0 |
| MS.gene56518.t1 | AT5G14260 | 25.575 | 391 | 239 | 15 | 85 | 445 | 115 | 483 | 2.50e-12 | 69.3 |
| MS.gene56518.t1 | AT5G14260 | 25.575 | 391 | 239 | 15 | 85 | 445 | 115 | 483 | 2.50e-12 | 69.3 |
| MS.gene56518.t1 | AT5G14260 | 25.575 | 391 | 239 | 15 | 85 | 445 | 115 | 483 | 2.50e-12 | 69.3 |
| MS.gene56518.t1 | AT3G55080 | 24.615 | 260 | 172 | 9 | 97 | 349 | 1 | 243 | 3.88e-12 | 68.2 |
| MS.gene56518.t1 | AT3G55080 | 24.615 | 260 | 172 | 9 | 97 | 349 | 1 | 243 | 3.88e-12 | 68.2 |
| MS.gene56518.t1 | AT3G55080 | 24.664 | 223 | 151 | 7 | 133 | 349 | 6 | 217 | 1.08e-11 | 66.6 |
| MS.gene56518.t1 | AT3G55080 | 24.664 | 223 | 146 | 7 | 133 | 349 | 6 | 212 | 2.32e-11 | 65.5 |
Find 112 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACACTGGATGACTTCTTC+TGG | 0.230073 | 4.4:-30298407 | MS.gene56518:CDS |
| GGGTACCGATGCTTTCTTAT+TGG | 0.244903 | 4.4:-30297169 | MS.gene56518:CDS |
| ACTACTAACCTTGAAGTTCT+TGG | 0.282877 | 4.4:+30298664 | None:intergenic |
| GATGACTTCTTCTGGGCATT+TGG | 0.290567 | 4.4:-30298399 | MS.gene56518:CDS |
| CTCCAGCAGTTCAAACCTTC+TGG | 0.294167 | 4.4:-30299112 | MS.gene56518:CDS |
| ACCAGCAAGGGCGGATTTGC+AGG | 0.304466 | 4.4:+30297056 | None:intergenic |
| GGATTTATCCACAACCTCTT+AGG | 0.337946 | 4.4:+30298966 | None:intergenic |
| GCAGAGTTGGCTCTGGACTA+TGG | 0.343115 | 4.4:-30297384 | MS.gene56518:CDS |
| TTCCAGAAGGTTTGAACTGC+TGG | 0.346946 | 4.4:+30299110 | None:intergenic |
| GCCTGCAAATCCGCCCTTGC+TGG | 0.360260 | 4.4:-30297057 | MS.gene56518:CDS |
| CACTGTTCAGAGACTCCATC+TGG | 0.373117 | 4.4:-30297143 | MS.gene56518:CDS |
| GATCTTCGAGCAGAAAGAAT+TGG | 0.388839 | 4.4:-30296675 | MS.gene56518:CDS |
| CTGTAGTCACTCTGGCACTA+TGG | 0.394416 | 4.4:+30297883 | None:intergenic |
| AAACTGATTCTACAATATAT+TGG | 0.395083 | 4.4:-30298806 | MS.gene56518:intron |
| TTCTGTCAAGGCAGGAGAAC+AGG | 0.398267 | 4.4:-30297784 | MS.gene56518:intron |
| GCAACCAATCCTAAACCTTC+TGG | 0.402948 | 4.4:+30299029 | None:intergenic |
| CTCAAGGATCTTGGACTTTG+CGG | 0.406199 | 4.4:-30296617 | MS.gene56518:CDS |
| GAAAGGAGGCTCAAGGATCT+TGG | 0.407166 | 4.4:-30296626 | MS.gene56518:CDS |
| GAAGAATGAATGTCTGAAAC+TGG | 0.408078 | 4.4:-30298475 | MS.gene56518:CDS |
| TATGCATATCGATCTGCATT+TGG | 0.408825 | 4.4:+30297351 | None:intergenic |
| GCTGTTGCTGCTTCAGAGAT+AGG | 0.410978 | 4.4:-30298939 | MS.gene56518:CDS |
| TTCTCCTGCCTTGACAGAAA+GGG | 0.411526 | 4.4:+30297788 | None:intergenic |
| GCTACTGATTTGACAGAGAA+AGG | 0.414228 | 4.4:+30299161 | None:intergenic |
| GACACTGGATGACTTCTTCT+GGG | 0.421868 | 4.4:-30298406 | MS.gene56518:CDS |
| ACTAGCTTTCACTGGTGTCT+TGG | 0.428693 | 4.4:+30299058 | None:intergenic |
| AGTGCTACTAATCTCAGATA+TGG | 0.428804 | 4.4:+30297195 | None:intergenic |
| TCTGAAGCAGCAACAGCATC+AGG | 0.439199 | 4.4:+30298945 | None:intergenic |
| TTTCTTGATAATATTCCAAC+TGG | 0.444121 | 4.4:+30296645 | None:intergenic |
| TGTGATTCCACTTGCAGACT+TGG | 0.445510 | 4.4:-30298328 | MS.gene56518:intron |
| TGTTGTTTCTTATTAGAGAA+AGG | 0.454728 | 4.4:-30298878 | MS.gene56518:CDS |
| GGTCAAGAGAGGATTCTGTT+TGG | 0.455743 | 4.4:-30298857 | MS.gene56518:CDS |
| ATAGTTTATTACCTGTTCAA+TGG | 0.458942 | 4.4:+30297023 | None:intergenic |
| TGCAGGTGCCTAAGAGGTTG+TGG | 0.460079 | 4.4:-30298974 | MS.gene56518:CDS |
| CATTTGGAATTCTCAGATCA+AGG | 0.465096 | 4.4:-30298383 | MS.gene56518:CDS |
| GTTCTCCTGCCTTGACAGAA+AGG | 0.468467 | 4.4:+30297787 | None:intergenic |
| CAGATGAAGAGTTGGTACTT+TGG | 0.474930 | 4.4:+30299190 | None:intergenic |
| AGATATGGAAGCATCCCTTC+TGG | 0.477120 | 4.4:+30297210 | None:intergenic |
| CTCCTCATTATCACGGCTCA+TGG | 0.477204 | 4.4:+30297104 | None:intergenic |
| AAGCAATGCAGAGTTGGCTC+TGG | 0.478444 | 4.4:-30297391 | MS.gene56518:CDS |
| CTCCATCTGGGGTCATCTTG+AGG | 0.481584 | 4.4:-30297130 | MS.gene56518:CDS |
| AAGAGGCAAATCTAGATTCA+AGG | 0.484970 | 4.4:-30296757 | MS.gene56518:CDS |
| AAGAAGTCATCCAGTGTCAC+AGG | 0.486528 | 4.4:+30298411 | None:intergenic |
| GAAGAGCTCCAAGAACTTCA+AGG | 0.489004 | 4.4:-30298672 | MS.gene56518:intron |
| GGTACCACACTAGCTTTCAC+TGG | 0.496675 | 4.4:+30299050 | None:intergenic |
| TCTGTTTGGAAGCATTACTT+TGG | 0.496732 | 4.4:-30298843 | MS.gene56518:CDS |
| GGGATTACCTATTTGCCCTA+AGG | 0.498091 | 4.4:-30297815 | MS.gene56518:CDS |
| AAACAAAAGCAATGCAGAGT+TGG | 0.498255 | 4.4:-30297397 | MS.gene56518:CDS |
| TTATCACACAACCATTGAAC+AGG | 0.500689 | 4.4:-30297034 | MS.gene56518:intron |
| CAGTTCAAACCTTCTGGAAG+TGG | 0.501931 | 4.4:-30299106 | MS.gene56518:CDS |
| AGTGTGGTACCAGAAGGTTT+AGG | 0.510846 | 4.4:-30299038 | MS.gene56518:CDS |
| TATGCATACACCTTGACACT+GGG | 0.512341 | 4.4:-30297336 | MS.gene56518:CDS |
| TTACTTTGGTATTCTGCCAC+AGG | 0.513694 | 4.4:-30298829 | MS.gene56518:CDS |
| AGATCTCATCAATTTGCTGC+AGG | 0.518502 | 4.4:+30296693 | None:intergenic |
| TCATCCAGTGTCACAGGAGA+AGG | 0.518798 | 4.4:+30298417 | None:intergenic |
| GGTTTCTTCAGATGAAGAGT+TGG | 0.524401 | 4.4:+30299182 | None:intergenic |
| CTGTTGCTGCTTCAGAGATA+GGG | 0.524576 | 4.4:-30298938 | MS.gene56518:CDS |
| GGAAGCATCCCTTCTGGAAG+AGG | 0.525978 | 4.4:+30297216 | None:intergenic |
| GCCCATGAGCCGTGATAATG+AGG | 0.527832 | 4.4:-30297106 | MS.gene56518:CDS |
| ATCTGAGATTAGTAGCACTA+GGG | 0.531413 | 4.4:-30297191 | MS.gene56518:CDS |
| TCTCCTGCCTTGACAGAAAG+GGG | 0.533728 | 4.4:+30297789 | None:intergenic |
| CTTGGACTTTGCGGTGAAAG+TGG | 0.534968 | 4.4:-30296608 | MS.gene56518:CDS |
| AGTTGGAATATTATCAAGAA+AGG | 0.536592 | 4.4:-30296643 | MS.gene56518:CDS |
| AGAATTGGAACTAGACCAGT+TGG | 0.537321 | 4.4:-30296660 | MS.gene56518:CDS |
| GTCAAATCAGTAGCTTCACT+TGG | 0.539419 | 4.4:-30299152 | MS.gene56518:CDS |
| TCCTCATTATCACGGCTCAT+GGG | 0.543503 | 4.4:+30297105 | None:intergenic |
| TATGAAGTCAAAGGACCAGC+TGG | 0.544591 | 4.4:-30297849 | MS.gene56518:CDS |
| TTCTTGTAGCCACTTCCAGA+AGG | 0.547912 | 4.4:+30299097 | None:intergenic |
| GCAGGATCGCAAGCTGAAAG+AGG | 0.551716 | 4.4:-30296774 | MS.gene56518:intron |
| CACCTCAAGATGACCCCAGA+TGG | 0.552036 | 4.4:+30297128 | None:intergenic |
| TCCCAAGAGAAAAGACCAGC+TGG | 0.553440 | 4.4:+30297834 | None:intergenic |
| GGTACCAGAAGGTTTAGGAT+TGG | 0.557599 | 4.4:-30299033 | MS.gene56518:CDS |
| ACTGTTCAGAGACTCCATCT+GGG | 0.560536 | 4.4:-30297142 | MS.gene56518:CDS |
| TTGCTGCTTCAGAGATAGGG+AGG | 0.563350 | 4.4:-30298935 | MS.gene56518:CDS |
| TGGAAGTGGCTACAAGAAGA+AGG | 0.567416 | 4.4:-30299092 | MS.gene56518:CDS |
| TATTAGAGAAAGGTCAAGAG+AGG | 0.570783 | 4.4:-30298868 | MS.gene56518:CDS |
| TATAACCGCCCTCTTCCAGA+AGG | 0.578293 | 4.4:-30297225 | MS.gene56518:CDS |
| ATGATCATCTGTAGTCACTC+TGG | 0.581191 | 4.4:+30297875 | None:intergenic |
| GATCATGCTTATGAAGTCAA+AGG | 0.581508 | 4.4:-30297858 | MS.gene56518:CDS |
| ATTTGGAATTCTCAGATCAA+GGG | 0.583610 | 4.4:-30298382 | MS.gene56518:CDS |
| TATCTGAGATTAGTAGCACT+AGG | 0.584493 | 4.4:-30297192 | MS.gene56518:CDS |
| ATATGCATACACCTTGACAC+TGG | 0.586569 | 4.4:-30297337 | MS.gene56518:CDS |
| CTCGGATATCCCCAGTGTCA+AGG | 0.587901 | 4.4:+30297326 | None:intergenic |
| GTTATTCCAGTGCAGGTCAG+AGG | 0.594794 | 4.4:-30298694 | MS.gene56518:intron |
| TAGCAGTCGGAATAAGAGAA+GGG | 0.598131 | 4.4:-30296727 | MS.gene56518:CDS |
| GTAGACGTTGCTGAGACCAA+TGG | 0.600772 | 4.4:-30297279 | MS.gene56518:CDS |
| TCAAGGCTTGCAATAGCAGT+CGG | 0.600784 | 4.4:-30296740 | MS.gene56518:CDS |
| TGGAATATTATCAAGAAAGG+AGG | 0.602703 | 4.4:-30296640 | MS.gene56518:CDS |
| CTCCTGCCTTGACAGAAAGG+GGG | 0.606795 | 4.4:+30297790 | None:intergenic |
| GTTCTTACCAAGTCTGCAAG+TGG | 0.608009 | 4.4:+30298321 | None:intergenic |
| ATAGCAGTCGGAATAAGAGA+AGG | 0.608578 | 4.4:-30296728 | MS.gene56518:CDS |
| TTATCAAGAAAGGAGGCTCA+AGG | 0.609776 | 4.4:-30296633 | MS.gene56518:CDS |
| AAAGCTAGTGTGGTACCAGA+AGG | 0.610016 | 4.4:-30299044 | MS.gene56518:CDS |
| TGCTGCTTCAGAGATAGGGA+GGG | 0.612119 | 4.4:-30298934 | MS.gene56518:CDS |
| GGTGAAAGTGGTGATGTCCT+TGG | 0.620946 | 4.4:-30296596 | MS.gene56518:CDS |
| GGTTGTGTGATAACCAGCAA+GGG | 0.628035 | 4.4:+30297044 | None:intergenic |
| TGGTTGTGTGATAACCAGCA+AGG | 0.629031 | 4.4:+30297043 | None:intergenic |
| AGCAGTCGGAATAAGAGAAG+GGG | 0.636940 | 4.4:-30296726 | MS.gene56518:CDS |
| GAAGCATCCCTTCTGGAAGA+GGG | 0.639736 | 4.4:+30297217 | None:intergenic |
| ATACTAGCTCCTCATTATCA+CGG | 0.640006 | 4.4:+30297097 | None:intergenic |
| ATTGTAGAATCAGTTTCCTG+TGG | 0.648786 | 4.4:+30298813 | None:intergenic |
| ATAACCGCCCTCTTCCAGAA+GGG | 0.651691 | 4.4:-30297224 | MS.gene56518:CDS |
| TGATTCCAATAAGAAAGCAT+CGG | 0.654051 | 4.4:+30297164 | None:intergenic |
| GACACCAGTGAAAGCTAGTG+TGG | 0.671601 | 4.4:-30299054 | MS.gene56518:CDS |
| TCTGAGATTAGTAGCACTAG+GGG | 0.673869 | 4.4:-30297190 | MS.gene56518:CDS |
| CTGTTCAGAGACTCCATCTG+GGG | 0.675062 | 4.4:-30297141 | MS.gene56518:CDS |
| TGTGTGATAACCAGCAAGGG+CGG | 0.678647 | 4.4:+30297047 | None:intergenic |
| ATGCATACACCTTGACACTG+GGG | 0.698561 | 4.4:-30297335 | MS.gene56518:CDS |
| GCATCCCTTCTGGAAGAGGG+CGG | 0.703925 | 4.4:+30297220 | None:intergenic |
| AACAACATAACAGACAACCA+TGG | 0.720499 | 4.4:+30298894 | None:intergenic |
| CTGAGATTAGTAGCACTAGG+GGG | 0.740933 | 4.4:-30297189 | MS.gene56518:CDS |
| TGTGTAGTAAGTTGACACCA+TGG | 0.752669 | 4.4:-30298911 | MS.gene56518:CDS |
| TGAGGAGCTAGTATGCAAAG+CGG | 0.776917 | 4.4:-30297088 | MS.gene56518:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATCAATATTTGAAAACA+TGG | + | chr4.4:30297225-30297244 | None:intergenic | 15.0% |
| !! | TAATCAATATTTGAAAACAT+GGG | + | chr4.4:30297224-30297243 | None:intergenic | 15.0% |
| !! | TGTAATGAAATATATAGACA+CGG | + | chr4.4:30298912-30298931 | None:intergenic | 20.0% |
| !!! | AAACTGATTCTACAATATAT+TGG | - | chr4.4:30297034-30297053 | MS.gene56518:intron | 20.0% |
| !!! | TGCTTTTGTTTAAATCATAT+TGG | + | chr4.4:30298434-30298453 | None:intergenic | 20.0% |
| ! | AAACAAGTAAAGACTCAATT+TGG | + | chr4.4:30297850-30297869 | None:intergenic | 25.0% |
| ! | AAGGAAAAAGCTTCTTATTA+GGG | + | chr4.4:30297407-30297426 | None:intergenic | 25.0% |
| ! | AGGTAATAAACTATACATTC+AGG | - | chr4.4:30298826-30298845 | MS.gene56518:CDS | 25.0% |
| ! | AGTTGGAATATTATCAAGAA+AGG | - | chr4.4:30299197-30299216 | MS.gene56518:CDS | 25.0% |
| ! | ATAGTTTATTACCTGTTCAA+TGG | + | chr4.4:30298820-30298839 | None:intergenic | 25.0% |
| ! | ATGAAAAGAAACATATGAAG+AGG | + | chr4.4:30298095-30298114 | None:intergenic | 25.0% |
| ! | CAATATGCTTCAACAAAAAA+TGG | - | chr4.4:30297895-30297914 | MS.gene56518:intron | 25.0% |
| ! | GGTAATAAACTATACATTCA+GGG | - | chr4.4:30298827-30298846 | MS.gene56518:CDS | 25.0% |
| ! | TGATTCTACAATATATTGGT+GGG | - | chr4.4:30297038-30297057 | MS.gene56518:CDS | 25.0% |
| !! | GAAATTGAGTTCTTTTCATA+TGG | - | chr4.4:30297100-30297119 | MS.gene56518:CDS | 25.0% |
| !! | TCAACATCTATTAGTTTACA+AGG | - | chr4.4:30297756-30297775 | MS.gene56518:intron | 25.0% |
| !! | TTTCTTGATAATATTCCAAC+TGG | + | chr4.4:30299198-30299217 | None:intergenic | 25.0% |
| !! | TTTTGTTGAAGCATATTGAT+GGG | + | chr4.4:30297893-30297912 | None:intergenic | 25.0% |
| !! | TTTTTGTTGAAGCATATTGA+TGG | + | chr4.4:30297894-30297913 | None:intergenic | 25.0% |
| !!! | TAGAAATGATGTTATTTTGC+AGG | - | chr4.4:30296849-30296868 | MS.gene56518:intron | 25.0% |
| !!! | TGTTGTTTCTTATTAGAGAA+AGG | - | chr4.4:30296962-30296981 | MS.gene56518:intron | 25.0% |
| !!! | TTTGGATTAGTTTCTAACTT+AGG | + | chr4.4:30297832-30297851 | None:intergenic | 25.0% |
| ACAGAAGAAGAGAAATGAAA+AGG | + | chr4.4:30297544-30297563 | None:intergenic | 30.0% | |
| ATTCAGTTCATTCAAAGTTC+AGG | + | chr4.4:30297295-30297314 | None:intergenic | 30.0% | |
| CTACTTTGTCGTCAAAAAAA+GGG | + | chr4.4:30298545-30298564 | None:intergenic | 30.0% | |
| CTGATTCTACAATATATTGG+TGG | - | chr4.4:30297037-30297056 | MS.gene56518:CDS | 30.0% | |
| CTTAAGAACATTAACTGATC+TGG | + | chr4.4:30297647-30297666 | None:intergenic | 30.0% | |
| GAAGGAAAAAGCTTCTTATT+AGG | + | chr4.4:30297408-30297427 | None:intergenic | 30.0% | |
| GAGAGTTTCTCAATTAAAAC+CGG | + | chr4.4:30297810-30297829 | None:intergenic | 30.0% | |
| TATTCTCATTACCATCATGT+TGG | + | chr4.4:30298855-30298874 | None:intergenic | 30.0% | |
| TCTACTTTGTCGTCAAAAAA+AGG | + | chr4.4:30298546-30298565 | None:intergenic | 30.0% | |
| TCTGATCCAGAAATTGAATT+CGG | + | chr4.4:30297933-30297952 | None:intergenic | 30.0% | |
| TGGAATATTATCAAGAAAGG+AGG | - | chr4.4:30299200-30299219 | MS.gene56518:CDS | 30.0% | |
| TTGAATGAACTGAATTGAGT+AGG | - | chr4.4:30297300-30297319 | MS.gene56518:CDS | 30.0% | |
| ! | ATGCTTCTTTTTCCTTGATA+TGG | + | chr4.4:30298243-30298262 | None:intergenic | 30.0% |
| ! | ATTGCATTTTACGTAGTACA+TGG | - | chr4.4:30298977-30298996 | MS.gene56518:CDS | 30.0% |
| ! | ATTTGGAATTCTCAGATCAA+GGG | - | chr4.4:30297458-30297477 | MS.gene56518:intron | 30.0% |
| ! | CATTTTCCGAATTCAATTTC+TGG | - | chr4.4:30297924-30297943 | MS.gene56518:intron | 30.0% |
| ! | TGATTCCAATAAGAAAGCAT+CGG | + | chr4.4:30298679-30298698 | None:intergenic | 30.0% |
| ! | TTCTCTTTTCACACAAACAA+GGG | - | chr4.4:30296610-30296629 | MS.gene56518:CDS | 30.0% |
| ! | TTGAGTTCTTTTCATATGGT+TGG | - | chr4.4:30297104-30297123 | MS.gene56518:CDS | 30.0% |
| ! | TTGCATTTTACGTAGTACAT+GGG | - | chr4.4:30298978-30298997 | MS.gene56518:CDS | 30.0% |
| ! | TTTTCATGCTTCTCAATTCT+TGG | - | chr4.4:30298361-30298380 | MS.gene56518:CDS | 30.0% |
| AAACAAAAGCAATGCAGAGT+TGG | - | chr4.4:30298443-30298462 | MS.gene56518:CDS | 35.0% | |
| AACAACATAACAGACAACCA+TGG | + | chr4.4:30296949-30296968 | None:intergenic | 35.0% | |
| AAGAGGCAAATCTAGATTCA+AGG | - | chr4.4:30299083-30299102 | MS.gene56518:CDS | 35.0% | |
| ACTACTAACCTTGAAGTTCT+TGG | + | chr4.4:30297179-30297198 | None:intergenic | 35.0% | |
| ATACTAGCTCCTCATTATCA+CGG | + | chr4.4:30298746-30298765 | None:intergenic | 35.0% | |
| ATTGTAGAATCAGTTTCCTG+TGG | + | chr4.4:30297030-30297049 | None:intergenic | 35.0% | |
| GAACAAAGCATACAAATTGC+AGG | - | chr4.4:30299048-30299067 | MS.gene56518:CDS | 35.0% | |
| GATCATGCTTATGAAGTCAA+AGG | - | chr4.4:30297982-30298001 | MS.gene56518:intron | 35.0% | |
| GTACTACGTAAAATGCAATG+AGG | + | chr4.4:30298976-30298995 | None:intergenic | 35.0% | |
| TATGCATATCGATCTGCATT+TGG | + | chr4.4:30298492-30298511 | None:intergenic | 35.0% | |
| TATTAGAGAAAGGTCAAGAG+AGG | - | chr4.4:30296972-30296991 | MS.gene56518:intron | 35.0% | |
| TTATCACACAACCATTGAAC+AGG | - | chr4.4:30298806-30298825 | MS.gene56518:intron | 35.0% | |
| TTCATTCAAAGTTCAGGATG+TGG | + | chr4.4:30297289-30297308 | None:intergenic | 35.0% | |
| ! | AGGACTTCTTTTGTATGTGA+AGG | - | chr4.4:30297776-30297795 | MS.gene56518:intron | 35.0% |
| ! | AGTGCTACTAATCTCAGATA+TGG | + | chr4.4:30298648-30298667 | None:intergenic | 35.0% |
| ! | ATATGGTTGGTTGATTCAGT+TGG | - | chr4.4:30297117-30297136 | MS.gene56518:CDS | 35.0% |
| ! | ATCTGAGATTAGTAGCACTA+GGG | - | chr4.4:30298649-30298668 | MS.gene56518:intron | 35.0% |
| ! | CAACTAGATTTTCATTGCGA+AGG | + | chr4.4:30297494-30297513 | None:intergenic | 35.0% |
| ! | CATTTGGAATTCTCAGATCA+AGG | - | chr4.4:30297457-30297476 | MS.gene56518:intron | 35.0% |
| ! | CTTCTCTTTTCACACAAACA+AGG | - | chr4.4:30296609-30296628 | MS.gene56518:CDS | 35.0% |
| ! | GAAGAATGAATGTCTGAAAC+TGG | - | chr4.4:30297365-30297384 | MS.gene56518:CDS | 35.0% |
| ! | GGACTTCTTTTGTATGTGAA+GGG | - | chr4.4:30297777-30297796 | MS.gene56518:intron | 35.0% |
| ! | TATCTGAGATTAGTAGCACT+AGG | - | chr4.4:30298648-30298667 | MS.gene56518:intron | 35.0% |
| ! | TCTAAAATTATGTCCACGCT+GGG | + | chr4.4:30297623-30297642 | None:intergenic | 35.0% |
| !! | TCTGTTTGGAAGCATTACTT+TGG | - | chr4.4:30296997-30297016 | MS.gene56518:intron | 35.0% |
| !! | TGGTTGATTCAGTTGGTAAT+TGG | - | chr4.4:30297124-30297143 | MS.gene56518:CDS | 35.0% |
| !!! | ATTGGTGGGTTTCTTTTGTT+TGG | - | chr4.4:30297052-30297071 | MS.gene56518:CDS | 35.0% |
| !!! | CAGTTGGTAACTTTTACTGT+AGG | - | chr4.4:30298401-30298420 | MS.gene56518:CDS | 35.0% |
| AAAGTTCTGCTGCAACTTTC+TGG | + | chr4.4:30298292-30298311 | None:intergenic | 40.0% | |
| AGAATTGGAACTAGACCAGT+TGG | - | chr4.4:30299180-30299199 | MS.gene56518:CDS | 40.0% | |
| ATAGCAGTCGGAATAAGAGA+AGG | - | chr4.4:30299112-30299131 | MS.gene56518:CDS | 40.0% | |
| ATATGCATACACCTTGACAC+TGG | - | chr4.4:30298503-30298522 | MS.gene56518:CDS | 40.0% | |
| ATGATCATCTGTAGTCACTC+TGG | + | chr4.4:30297968-30297987 | None:intergenic | 40.0% | |
| CACATTCATAACTGTGCAGT+TGG | - | chr4.4:30298385-30298404 | MS.gene56518:CDS | 40.0% | |
| GATCTTCGAGCAGAAAGAAT+TGG | - | chr4.4:30299165-30299184 | MS.gene56518:CDS | 40.0% | |
| GGATTTATCCACAACCTCTT+AGG | + | chr4.4:30296877-30296896 | None:intergenic | 40.0% | |
| GGTTTCTTCAGATGAAGAGT+TGG | + | chr4.4:30296661-30296680 | None:intergenic | 40.0% | |
| GTAATTGGTTATTCCAGTGC+AGG | - | chr4.4:30297139-30297158 | MS.gene56518:CDS | 40.0% | |
| GTCAAAAAAAGGGTCTGACT+CGG | + | chr4.4:30298535-30298554 | None:intergenic | 40.0% | |
| GTCAAATCAGTAGCTTCACT+TGG | - | chr4.4:30296688-30296707 | MS.gene56518:CDS | 40.0% | |
| TAGCAGTCGGAATAAGAGAA+GGG | - | chr4.4:30299113-30299132 | MS.gene56518:CDS | 40.0% | |
| TATGCATACACCTTGACACT+GGG | - | chr4.4:30298504-30298523 | MS.gene56518:CDS | 40.0% | |
| TGCTGTCTGAGAAAAACCAT+TGG | + | chr4.4:30298580-30298599 | None:intergenic | 40.0% | |
| TTACTTTGGTATTCTGCCAC+AGG | - | chr4.4:30297011-30297030 | MS.gene56518:intron | 40.0% | |
| TTATCAAGAAAGGAGGCTCA+AGG | - | chr4.4:30299207-30299226 | MS.gene56518:CDS | 40.0% | |
| TTTCCTTGATATGGAAGAGC+TGG | + | chr4.4:30298234-30298253 | None:intergenic | 40.0% | |
| ! | AGTATTTTGCAAGGTCTCCA+AGG | + | chr4.4:30299264-30299283 | None:intergenic | 40.0% |
| ! | ATGGCTACAATCTTTTCTGG+AGG | - | chr4.4:30296574-30296593 | MS.gene56518:CDS | 40.0% |
| ! | GCAATCCAAGCTGTATTTTG+AGG | - | chr4.4:30298312-30298331 | MS.gene56518:intron | 40.0% |
| ! | TCTGAGATTAGTAGCACTAG+GGG | - | chr4.4:30298650-30298669 | MS.gene56518:intron | 40.0% |
| ! | TGTGTAGTAAGTTGACACCA+TGG | - | chr4.4:30296929-30296948 | MS.gene56518:intron | 40.0% |
| !! | AGATCTCATCAATTTGCTGC+AGG | + | chr4.4:30299150-30299169 | None:intergenic | 40.0% |
| !! | CAGATGAAGAGTTGGTACTT+TGG | + | chr4.4:30296653-30296672 | None:intergenic | 40.0% |
| !! | CTCTAAAATTATGTCCACGC+TGG | + | chr4.4:30297624-30297643 | None:intergenic | 40.0% |
| !! | CTTTCTGGCACTGATACATT+TGG | + | chr4.4:30298277-30298296 | None:intergenic | 40.0% |
| !! | GCTACTGATTTGACAGAGAA+AGG | + | chr4.4:30296682-30296701 | None:intergenic | 40.0% |
| !! | TTATTTTGCAGGTGCCTAAG+AGG | - | chr4.4:30296860-30296879 | MS.gene56518:intron | 40.0% |
| AAAGCTAGTGTGGTACCAGA+AGG | - | chr4.4:30296796-30296815 | MS.gene56518:intron | 45.0% | |
| AAGAAGTCATCCAGTGTCAC+AGG | + | chr4.4:30297432-30297451 | None:intergenic | 45.0% | |
| AATACATCCATGTCCATCCG+AGG | - | chr4.4:30298155-30298174 | MS.gene56518:intron | 45.0% | |
| ACTGTTCAGAGACTCCATCT+GGG | - | chr4.4:30298698-30298717 | MS.gene56518:intron | 45.0% | |
| AGCAGTCGGAATAAGAGAAG+GGG | - | chr4.4:30299114-30299133 | MS.gene56518:CDS | 45.0% | |
| AGTGTGGTACCAGAAGGTTT+AGG | - | chr4.4:30296802-30296821 | MS.gene56518:intron | 45.0% | |
| ATACATCCATGTCCATCCGA+GGG | - | chr4.4:30298156-30298175 | MS.gene56518:intron | 45.0% | |
| ATGCATACACCTTGACACTG+GGG | - | chr4.4:30298505-30298524 | MS.gene56518:CDS | 45.0% | |
| CATTCAGGGTTCCAACATGA+TGG | - | chr4.4:30298841-30298860 | MS.gene56518:CDS | 45.0% | |
| CTCAAGGATCTTGGACTTTG+CGG | - | chr4.4:30299223-30299242 | MS.gene56518:CDS | 45.0% | |
| CTGAGATTAGTAGCACTAGG+GGG | - | chr4.4:30298651-30298670 | MS.gene56518:intron | 45.0% | |
| GAAGAGCTCCAAGAACTTCA+AGG | - | chr4.4:30297168-30297187 | MS.gene56518:CDS | 45.0% | |
| GACACTGGATGACTTCTTCT+GGG | - | chr4.4:30297434-30297453 | MS.gene56518:intron | 45.0% | |
| GATGACTTCTTCTGGGCATT+TGG | - | chr4.4:30297441-30297460 | MS.gene56518:intron | 45.0% | |
| GCAACCAATCCTAAACCTTC+TGG | + | chr4.4:30296814-30296833 | None:intergenic | 45.0% | |
| GGGATTACCTATTTGCCCTA+AGG | - | chr4.4:30298025-30298044 | MS.gene56518:intron | 45.0% | |
| GGTCAAGAGAGGATTCTGTT+TGG | - | chr4.4:30296983-30297002 | MS.gene56518:intron | 45.0% | |
| GGTTGTGTGATAACCAGCAA+GGG | + | chr4.4:30298799-30298818 | None:intergenic | 45.0% | |
| GTTCTTACCAAGTCTGCAAG+TGG | + | chr4.4:30297522-30297541 | None:intergenic | 45.0% | |
| TAGCCAGCTCTTCCATATCA+AGG | - | chr4.4:30298228-30298247 | MS.gene56518:intron | 45.0% | |
| TATGAAGTCAAAGGACCAGC+TGG | - | chr4.4:30297991-30298010 | MS.gene56518:intron | 45.0% | |
| TCAAGGCTTGCAATAGCAGT+CGG | - | chr4.4:30299100-30299119 | MS.gene56518:CDS | 45.0% | |
| TCCTCATTATCACGGCTCAT+GGG | + | chr4.4:30298738-30298757 | None:intergenic | 45.0% | |
| TCTGTATCATGCAGCTGTAG+AGG | - | chr4.4:30297559-30297578 | MS.gene56518:intron | 45.0% | |
| TGACACTGGATGACTTCTTC+TGG | - | chr4.4:30297433-30297452 | MS.gene56518:intron | 45.0% | |
| TGAGGAGCTAGTATGCAAAG+CGG | - | chr4.4:30298752-30298771 | MS.gene56518:intron | 45.0% | |
| TGGAAGTGGCTACAAGAAGA+AGG | - | chr4.4:30296748-30296767 | MS.gene56518:CDS | 45.0% | |
| TGGTTGTGTGATAACCAGCA+AGG | + | chr4.4:30298800-30298819 | None:intergenic | 45.0% | |
| TGTCTATGATATTCCCAGCG+TGG | - | chr4.4:30297607-30297626 | MS.gene56518:intron | 45.0% | |
| TGTGATTCCACTTGCAGACT+TGG | - | chr4.4:30297512-30297531 | MS.gene56518:intron | 45.0% | |
| TTCCAGAAGGTTTGAACTGC+TGG | + | chr4.4:30296733-30296752 | None:intergenic | 45.0% | |
| TTCTCCTGCCTTGACAGAAA+GGG | + | chr4.4:30298055-30298074 | None:intergenic | 45.0% | |
| TTCTTGTAGCCACTTCCAGA+AGG | + | chr4.4:30296746-30296765 | None:intergenic | 45.0% | |
| TTGCGCCTCAAAATACAGCT+TGG | + | chr4.4:30298320-30298339 | None:intergenic | 45.0% | |
| ! | CAGTTCAAACCTTCTGGAAG+TGG | - | chr4.4:30296734-30296753 | MS.gene56518:CDS | 45.0% |
| ! | CTGTTGCTGCTTCAGAGATA+GGG | - | chr4.4:30296902-30296921 | MS.gene56518:intron | 45.0% |
| ! | GGTACCAGAAGGTTTAGGAT+TGG | - | chr4.4:30296807-30296826 | MS.gene56518:intron | 45.0% |
| ! | TTTTCCTTCTCCTGTGACAC+TGG | - | chr4.4:30297419-30297438 | MS.gene56518:CDS | 45.0% |
| !! | ACTAGCTTTCACTGGTGTCT+TGG | + | chr4.4:30296785-30296804 | None:intergenic | 45.0% |
| !! | AGATATGGAAGCATCCCTTC+TGG | + | chr4.4:30298633-30298652 | None:intergenic | 45.0% |
| !! | GGGTACCGATGCTTTCTTAT+TGG | - | chr4.4:30298671-30298690 | MS.gene56518:intron | 45.0% |
| !!! | ACCAGCTGGTCTTTTCTCTT+GGG | - | chr4.4:30298005-30298024 | MS.gene56518:intron | 45.0% |
| ATAACCGCCCTCTTCCAGAA+GGG | - | chr4.4:30298616-30298635 | MS.gene56518:intron | 50.0% | |
| CACTGTTCAGAGACTCCATC+TGG | - | chr4.4:30298697-30298716 | MS.gene56518:intron | 50.0% | |
| CTCCAGCAGTTCAAACCTTC+TGG | - | chr4.4:30296728-30296747 | MS.gene56518:CDS | 50.0% | |
| CTCCTCATTATCACGGCTCA+TGG | + | chr4.4:30298739-30298758 | None:intergenic | 50.0% | |
| CTGTAGTCACTCTGGCACTA+TGG | + | chr4.4:30297960-30297979 | None:intergenic | 50.0% | |
| CTGTTCAGAGACTCCATCTG+GGG | - | chr4.4:30298699-30298718 | MS.gene56518:intron | 50.0% | |
| CTTGGACTTTGCGGTGAAAG+TGG | - | chr4.4:30299232-30299251 | MS.gene56518:CDS | 50.0% | |
| GAAAGGAGGCTCAAGGATCT+TGG | - | chr4.4:30299214-30299233 | MS.gene56518:CDS | 50.0% | |
| GACACCAGTGAAAGCTAGTG+TGG | - | chr4.4:30296786-30296805 | MS.gene56518:intron | 50.0% | |
| GTAGACGTTGCTGAGACCAA+TGG | - | chr4.4:30298561-30298580 | MS.gene56518:intron | 50.0% | |
| GTATGTGAAGGGTCGTACAC+CGG | - | chr4.4:30297788-30297807 | MS.gene56518:CDS | 50.0% | |
| GTTATTCCAGTGCAGGTCAG+AGG | - | chr4.4:30297146-30297165 | MS.gene56518:CDS | 50.0% | |
| GTTCTCCTGCCTTGACAGAA+AGG | + | chr4.4:30298056-30298075 | None:intergenic | 50.0% | |
| TACATCCATGTCCATCCGAG+GGG | - | chr4.4:30298157-30298176 | MS.gene56518:intron | 50.0% | |
| TATAACCGCCCTCTTCCAGA+AGG | - | chr4.4:30298615-30298634 | MS.gene56518:intron | 50.0% | |
| TCATCCAGTGTCACAGGAGA+AGG | + | chr4.4:30297426-30297445 | None:intergenic | 50.0% | |
| TCCCAAGAGAAAAGACCAGC+TGG | + | chr4.4:30298009-30298028 | None:intergenic | 50.0% | |
| TCTCCTGCCTTGACAGAAAG+GGG | + | chr4.4:30298054-30298073 | None:intergenic | 50.0% | |
| TGTGTGATAACCAGCAAGGG+CGG | + | chr4.4:30298796-30298815 | None:intergenic | 50.0% | |
| TTCTGTCAAGGCAGGAGAAC+AGG | - | chr4.4:30298056-30298075 | MS.gene56518:intron | 50.0% | |
| ! | AAGCAATGCAGAGTTGGCTC+TGG | - | chr4.4:30298449-30298468 | MS.gene56518:CDS | 50.0% |
| ! | GAAGCATCCCTTCTGGAAGA+GGG | + | chr4.4:30298626-30298645 | None:intergenic | 50.0% |
| ! | GCTGTTGCTGCTTCAGAGAT+AGG | - | chr4.4:30296901-30296920 | MS.gene56518:intron | 50.0% |
| ! | GGTGAAAGTGGTGATGTCCT+TGG | - | chr4.4:30299244-30299263 | MS.gene56518:CDS | 50.0% |
| ! | TCTGAAGCAGCAACAGCATC+AGG | + | chr4.4:30296898-30296917 | None:intergenic | 50.0% |
| ! | TGCTGCTTCAGAGATAGGGA+GGG | - | chr4.4:30296906-30296925 | MS.gene56518:intron | 50.0% |
| ! | TTGCTGCTTCAGAGATAGGG+AGG | - | chr4.4:30296905-30296924 | MS.gene56518:intron | 50.0% |
| !! | GGTACCACACTAGCTTTCAC+TGG | + | chr4.4:30296793-30296812 | None:intergenic | 50.0% |
| !!! | GACCAGCTGGTCTTTTCTCT+TGG | - | chr4.4:30298004-30298023 | MS.gene56518:intron | 50.0% |
| AAGGAGCCCCCTTTCTGTCA+AGG | - | chr4.4:30298044-30298063 | MS.gene56518:intron | 55.0% | |
| CACCTCAAGATGACCCCAGA+TGG | + | chr4.4:30298715-30298734 | None:intergenic | 55.0% | |
| CTCCTGCCTTGACAGAAAGG+GGG | + | chr4.4:30298053-30298072 | None:intergenic | 55.0% | |
| CTCGGATATCCCCAGTGTCA+AGG | + | chr4.4:30298517-30298536 | None:intergenic | 55.0% | |
| GAAAACCCCTCGGATGGACA+TGG | + | chr4.4:30298165-30298184 | None:intergenic | 55.0% | |
| GACAGAAAGGGGGCTCCTTA+GGG | + | chr4.4:30298043-30298062 | None:intergenic | 55.0% | |
| GCAGGATCGCAAGCTGAAAG+AGG | - | chr4.4:30299066-30299085 | MS.gene56518:CDS | 55.0% | |
| TCCTACCGTCGAAAACCCCT+CGG | + | chr4.4:30298175-30298194 | None:intergenic | 55.0% | |
| TGACAGAAAGGGGGCTCCTT+AGG | + | chr4.4:30298044-30298063 | None:intergenic | 55.0% | |
| TGCAGGTGCCTAAGAGGTTG+TGG | - | chr4.4:30296866-30296885 | MS.gene56518:intron | 55.0% | |
| ! | CTCCATCTGGGGTCATCTTG+AGG | - | chr4.4:30298710-30298729 | MS.gene56518:intron | 55.0% |
| ! | GCCCATGAGCCGTGATAATG+AGG | - | chr4.4:30298734-30298753 | MS.gene56518:intron | 55.0% |
| ! | TCCATCCGAGGGGTTTTCGA+CGG | - | chr4.4:30298167-30298186 | MS.gene56518:intron | 55.0% |
| !! | GCAGAGTTGGCTCTGGACTA+TGG | - | chr4.4:30298456-30298475 | MS.gene56518:CDS | 55.0% |
| !! | GGAAGCATCCCTTCTGGAAG+AGG | + | chr4.4:30298627-30298646 | None:intergenic | 55.0% |
| ACCGTCGAAAACCCCTCGGA+TGG | + | chr4.4:30298171-30298190 | None:intergenic | 60.0% | |
| AGCCCCCTTTCTGTCAAGGC+AGG | - | chr4.4:30298048-30298067 | MS.gene56518:intron | 60.0% | |
| GCTCTTCCTCTGACCTGCAC+TGG | + | chr4.4:30297155-30297174 | None:intergenic | 60.0% | |
| GGGGGCTCCTTAGGGCAAAT+AGG | + | chr4.4:30298035-30298054 | None:intergenic | 60.0% | |
| ! | ACCAGCAAGGGCGGATTTGC+AGG | + | chr4.4:30298787-30298806 | None:intergenic | 60.0% |
| ! | GCATCCCTTCTGGAAGAGGG+CGG | + | chr4.4:30298623-30298642 | None:intergenic | 60.0% |
| ! | TCCGAGGGGTTTTCGACGGT+AGG | - | chr4.4:30298171-30298190 | MS.gene56518:intron | 60.0% |
| GCCTGCAAATCCGCCCTTGC+TGG | - | chr4.4:30298783-30298802 | MS.gene56518:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 30296574 | 30299288 | 30296574 | ID=MS.gene56518 |
| chr4.4 | mRNA | 30296574 | 30299288 | 30296574 | ID=MS.gene56518.t1;Parent=MS.gene56518 |
| chr4.4 | exon | 30298807 | 30299288 | 30298807 | ID=MS.gene56518.t1.exon1;Parent=MS.gene56518.t1 |
| chr4.4 | CDS | 30298807 | 30299288 | 30298807 | ID=cds.MS.gene56518.t1;Parent=MS.gene56518.t1 |
| chr4.4 | exon | 30298673 | 30298701 | 30298673 | ID=MS.gene56518.t1.exon2;Parent=MS.gene56518.t1 |
| chr4.4 | CDS | 30298673 | 30298701 | 30298673 | ID=cds.MS.gene56518.t1;Parent=MS.gene56518.t1 |
| chr4.4 | exon | 30298329 | 30298540 | 30298329 | ID=MS.gene56518.t1.exon3;Parent=MS.gene56518.t1 |
| chr4.4 | CDS | 30298329 | 30298540 | 30298329 | ID=cds.MS.gene56518.t1;Parent=MS.gene56518.t1 |
| chr4.4 | exon | 30297785 | 30297910 | 30297785 | ID=MS.gene56518.t1.exon4;Parent=MS.gene56518.t1 |
| chr4.4 | CDS | 30297785 | 30297910 | 30297785 | ID=cds.MS.gene56518.t1;Parent=MS.gene56518.t1 |
| chr4.4 | exon | 30297035 | 30297439 | 30297035 | ID=MS.gene56518.t1.exon5;Parent=MS.gene56518.t1 |
| chr4.4 | CDS | 30297035 | 30297439 | 30297035 | ID=cds.MS.gene56518.t1;Parent=MS.gene56518.t1 |
| chr4.4 | exon | 30296574 | 30296792 | 30296574 | ID=MS.gene56518.t1.exon6;Parent=MS.gene56518.t1 |
| chr4.4 | CDS | 30296574 | 30296792 | 30296574 | ID=cds.MS.gene56518.t1;Parent=MS.gene56518.t1 |
| Gene Sequence |
| Protein sequence |
