Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025381.01.T01 | XP_003612646.2 | 93.583 | 187 | 12 | 0 | 1 | 187 | 89 | 275 | 1.39E-125 | 374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025381.01.T01 | G7K864 | 93.583 | 187 | 12 | 0 | 1 | 187 | 89 | 275 | 6.62e-126 | 374 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048461.01 | MsG0580025381.01 | 0.811011 | 8.667147e-51 | 5.305460e-48 |
| MsG0180000065.01 | MsG0580025381.01 | 0.823979 | 1.034863e-53 | 9.047688e-51 |
| MsG0180000402.01 | MsG0580025381.01 | 0.822427 | 2.383139e-53 | 1.994189e-50 |
| MsG0180000470.01 | MsG0580025381.01 | 0.805896 | 1.069902e-49 | 5.727380e-47 |
| MsG0180000475.01 | MsG0580025381.01 | 0.808408 | 3.142720e-50 | 1.795561e-47 |
| MsG0180000555.01 | MsG0580025381.01 | 0.846476 | 2.120272e-59 | 3.654381e-56 |
| MsG0180000702.01 | MsG0580025381.01 | 0.827202 | 1.782203e-54 | 1.708856e-51 |
| MsG0180000703.01 | MsG0580025381.01 | 0.826066 | 3.326157e-54 | 3.086395e-51 |
| MsG0180000741.01 | MsG0580025381.01 | 0.827980 | 1.158880e-54 | 1.136685e-51 |
| MsG0180000797.01 | MsG0580025381.01 | 0.804539 | 2.057682e-49 | 1.063688e-46 |
| MsG0180000836.01 | MsG0580025381.01 | 0.811024 | 8.607085e-51 | 5.270422e-48 |
| MsG0180000855.01 | MsG0580025381.01 | 0.818735 | 1.678199e-52 | 1.266535e-49 |
| MsG0180001173.01 | MsG0580025381.01 | 0.803686 | 3.095969e-49 | 1.565754e-46 |
| MsG0180001178.01 | MsG0580025381.01 | 0.818477 | 1.920189e-52 | 1.438952e-49 |
| MsG0180001566.01 | MsG0580025381.01 | 0.807833 | 4.167726e-50 | 2.345299e-47 |
| MsG0180001662.01 | MsG0580025381.01 | 0.820763 | 5.776743e-53 | 4.612208e-50 |
| MsG0180002071.01 | MsG0580025381.01 | 0.842459 | 2.552318e-58 | 3.872890e-55 |
| MsG0180002894.01 | MsG0580025381.01 | 0.807996 | 3.847707e-50 | 2.174532e-47 |
| MsG0180002952.01 | MsG0580025381.01 | 0.855358 | 6.656216e-62 | 1.532865e-58 |
| MsG0180003673.01 | MsG0580025381.01 | 0.804794 | 1.820287e-49 | 9.472531e-47 |
| MsG0180003686.01 | MsG0580025381.01 | 0.814953 | 1.184968e-51 | 8.061947e-49 |
| MsG0180003807.01 | MsG0580025381.01 | 0.800955 | 1.130484e-48 | 5.333565e-46 |
| MsG0180003810.01 | MsG0580025381.01 | 0.812496 | 4.118116e-51 | 2.622414e-48 |
| MsG0180004331.01 | MsG0580025381.01 | 0.806375 | 8.480646e-50 | 4.595673e-47 |
| MsG0180004372.01 | MsG0580025381.01 | 0.820760 | 5.786380e-53 | 4.619550e-50 |
| MsG0180004465.01 | MsG0580025381.01 | 0.812853 | 3.438943e-51 | 2.210458e-48 |
| MsG0180004691.01 | MsG0580025381.01 | 0.803889 | 2.810171e-49 | 1.428730e-46 |
| MsG0180004802.01 | MsG0580025381.01 | 0.812732 | 3.656935e-51 | 2.343252e-48 |
| MsG0180005185.01 | MsG0580025381.01 | 0.811221 | 7.802933e-51 | 4.802525e-48 |
| MsG0180005445.01 | MsG0580025381.01 | 0.810005 | 1.429180e-50 | 8.518072e-48 |
| MsG0180006134.01 | MsG0580025381.01 | 0.814261 | 1.686062e-51 | 1.125918e-48 |
| MsG0180006207.01 | MsG0580025381.01 | 0.810272 | 1.251460e-50 | 7.510675e-48 |
| MsG0280010614.01 | MsG0580025381.01 | 0.817854 | 2.657514e-52 | 1.957570e-49 |
| MsG0280010698.01 | MsG0580025381.01 | 0.807439 | 5.052324e-50 | 2.814113e-47 |
| MsG0280010816.01 | MsG0580025381.01 | 0.805743 | 1.151720e-49 | 6.141600e-47 |
| MsG0280011131.01 | MsG0580025381.01 | 0.801954 | 7.054497e-49 | 3.413242e-46 |
| MsG0280011201.01 | MsG0580025381.01 | 0.802448 | 5.582482e-49 | 2.735304e-46 |
| MsG0280011217.01 | MsG0580025381.01 | 0.800966 | 1.124385e-48 | 5.306353e-46 |
| MsG0280011293.01 | MsG0580025381.01 | 0.817975 | 2.494705e-52 | 1.843654e-49 |
| MsG0280011334.01 | MsG0580025381.01 | 0.818247 | 2.165570e-52 | 1.612390e-49 |
| MsG0280011444.01 | MsG0580025381.01 | 0.802811 | 4.698824e-49 | 2.323850e-46 |
| MsG0380012067.01 | MsG0580025381.01 | 0.810482 | 1.127671e-50 | 6.805334e-48 |
| MsG0380012362.01 | MsG0580025381.01 | 0.801034 | 1.089023e-48 | 5.148409e-46 |
| MsG0380013176.01 | MsG0580025381.01 | 0.822010 | 2.977214e-53 | 2.461571e-50 |
| MsG0380013363.01 | MsG0580025381.01 | 0.834537 | 2.831244e-56 | 3.370046e-53 |
| MsG0380014573.01 | MsG0580025381.01 | 0.812092 | 5.044644e-51 | 3.177620e-48 |
| MsG0380014701.01 | MsG0580025381.01 | 0.810708 | 1.007923e-50 | 6.119798e-48 |
| MsG0480018465.01 | MsG0580025381.01 | 0.813326 | 2.708162e-51 | 1.763187e-48 |
| MsG0480019297.01 | MsG0580025381.01 | 0.813846 | 2.081665e-51 | 1.374498e-48 |
| MsG0480019970.01 | MsG0580025381.01 | 0.810585 | 1.071124e-50 | 6.482074e-48 |
| MsG0480020499.01 | MsG0580025381.01 | 0.802072 | 6.673966e-49 | 3.238891e-46 |
| MsG0480020634.01 | MsG0580025381.01 | 0.836292 | 1.019027e-56 | 1.278790e-53 |
| MsG0480021276.01 | MsG0580025381.01 | 0.816541 | 5.242733e-52 | 3.725315e-49 |
| MsG0480021534.01 | MsG0580025381.01 | 0.829569 | 4.782370e-55 | 4.913273e-52 |
| MsG0480021778.01 | MsG0580025381.01 | 0.814460 | 1.523346e-51 | 1.022779e-48 |
| MsG0480021784.01 | MsG0580025381.01 | 0.816023 | 6.845775e-52 | 4.796202e-49 |
| MsG0480021900.01 | MsG0580025381.01 | 0.804885 | 1.742576e-49 | 9.090071e-47 |
| MsG0480021918.01 | MsG0580025381.01 | 0.812680 | 3.752689e-51 | 2.401288e-48 |
| MsG0480022169.01 | MsG0580025381.01 | 0.824592 | 7.423999e-54 | 6.605968e-51 |
| MsG0480022318.01 | MsG0580025381.01 | 0.803509 | 3.370064e-49 | 1.696690e-46 |
| MsG0480022533.01 | MsG0580025381.01 | 0.802394 | 5.727327e-49 | 2.802528e-46 |
| MsG0480023354.01 | MsG0580025381.01 | 0.835011 | 2.150497e-56 | 2.596218e-53 |
| MsG0480023654.01 | MsG0580025381.01 | 0.810323 | 1.220748e-50 | 7.335912e-48 |
| MsG0480023670.01 | MsG0580025381.01 | 0.838924 | 2.153369e-57 | 2.927200e-54 |
| MsG0480023718.01 | MsG0580025381.01 | 0.802455 | 5.566242e-49 | 2.727807e-46 |
| MsG0480023835.01 | MsG0580025381.01 | 0.815334 | 9.751765e-52 | 6.704230e-49 |
| MsG0480023873.01 | MsG0580025381.01 | 0.820518 | 6.576031e-53 | 5.214541e-50 |
| MsG0580024157.01 | MsG0580025381.01 | 0.818030 | 2.424576e-52 | 1.794522e-49 |
| MsG0580024304.01 | MsG0580025381.01 | 0.805074 | 1.591189e-49 | 8.339911e-47 |
| MsG0580024305.01 | MsG0580025381.01 | 0.801739 | 7.811729e-49 | 3.758909e-46 |
| MsG0580024418.01 | MsG0580025381.01 | 0.819161 | 1.343112e-52 | 1.025594e-49 |
| MsG0580024690.01 | MsG0580025381.01 | 0.802798 | 4.727855e-49 | 2.337384e-46 |
| MsG0580024733.01 | MsG0580025381.01 | 0.806459 | 8.142671e-50 | 4.422122e-47 |
| MsG0580024781.01 | MsG0580025381.01 | 0.826143 | 3.189518e-54 | 2.966155e-51 |
| MsG0580024960.01 | MsG0580025381.01 | 0.819601 | 1.066251e-52 | 8.242277e-50 |
| MsG0580025008.01 | MsG0580025381.01 | 0.807730 | 4.382466e-50 | 2.459623e-47 |
| MsG0580025022.01 | MsG0580025381.01 | 0.815863 | 7.435118e-52 | 5.186037e-49 |
| MsG0580025025.01 | MsG0580025381.01 | 0.800009 | 1.761754e-48 | 8.114314e-46 |
| MsG0580025206.01 | MsG0580025381.01 | 0.805180 | 1.511683e-49 | 7.944818e-47 |
| MsG0580025381.01 | MsG0580025532.01 | 0.812322 | 4.494406e-51 | 2.848763e-48 |
| MsG0580025381.01 | MsG0580025723.01 | 0.800972 | 1.121592e-48 | 5.293901e-46 |
| MsG0580025381.01 | MsG0580025758.01 | 0.812363 | 4.401444e-51 | 2.792985e-48 |
| MsG0580025381.01 | MsG0580025900.01 | 0.814953 | 1.184968e-51 | 8.061947e-49 |
| MsG0580025381.01 | MsG0580025907.01 | 0.802136 | 6.474030e-49 | 3.146957e-46 |
| MsG0580025381.01 | MsG0580027628.01 | 0.803385 | 3.575106e-49 | 1.794098e-46 |
| MsG0580025381.01 | MsG0580027745.01 | 0.800441 | 1.439126e-48 | 6.701521e-46 |
| MsG0580025381.01 | MsG0580029009.01 | 0.817719 | 2.849739e-52 | 2.091414e-49 |
| MsG0580025381.01 | MsG0580029622.01 | 0.818677 | 1.730518e-52 | 1.303889e-49 |
| MsG0580025381.01 | MsG0580029647.01 | 0.802423 | 5.649384e-49 | 2.766435e-46 |
| MsG0580025381.01 | MsG0580029651.01 | 0.831208 | 1.901794e-55 | 2.049636e-52 |
| MsG0580025381.01 | MsG0680030321.01 | 0.816568 | 5.171072e-52 | 3.677174e-49 |
| MsG0580025381.01 | MsG0680030364.01 | 0.817262 | 3.612008e-52 | 2.617701e-49 |
| MsG0580025381.01 | MsG0680030561.01 | 0.816013 | 6.883207e-52 | 4.821059e-49 |
| MsG0580025381.01 | MsG0680030677.01 | 0.802547 | 5.328135e-49 | 2.617189e-46 |
| MsG0580025381.01 | MsG0680031114.01 | 0.803813 | 2.914166e-49 | 1.478636e-46 |
| MsG0580025381.01 | MsG0680033302.01 | 0.807768 | 4.301896e-50 | 2.416680e-47 |
| MsG0580025381.01 | MsG0680034757.01 | 0.801663 | 8.094811e-49 | 3.887755e-46 |
| MsG0580025381.01 | MsG0680034891.01 | 0.808081 | 3.689841e-50 | 2.090033e-47 |
| MsG0580025381.01 | MsG0680035040.01 | 0.815958 | 7.079640e-52 | 4.951013e-49 |
| MsG0580025381.01 | MsG0680035225.01 | 0.800607 | 1.331461e-48 | 6.226258e-46 |
| MsG0580025381.01 | MsG0680035764.01 | 0.823948 | 1.051899e-53 | 9.189221e-51 |
| MsG0580025381.01 | MsG0780036018.01 | 0.834027 | 3.799151e-56 | 4.453201e-53 |
| MsG0580025381.01 | MsG0780036201.01 | 0.819078 | 1.402806e-52 | 1.068745e-49 |
| MsG0580025381.01 | MsG0780036773.01 | 0.819411 | 1.177885e-52 | 9.057257e-50 |
| MsG0580025381.01 | MsG0780037144.01 | 0.814621 | 1.403656e-51 | 9.464934e-49 |
| MsG0580025381.01 | MsG0780037146.01 | 0.843999 | 9.919536e-59 | 1.579583e-55 |
| MsG0580025381.01 | MsG0780037630.01 | 0.815395 | 9.448376e-52 | 6.506550e-49 |
| MsG0580025381.01 | MsG0780037975.01 | 0.806853 | 6.722330e-50 | 3.687860e-47 |
| MsG0580025381.01 | MsG0780038401.01 | 0.809514 | 1.822243e-50 | 1.072054e-47 |
| MsG0580025381.01 | MsG0780038602.01 | 0.815225 | 1.031101e-51 | 7.067037e-49 |
| MsG0580025381.01 | MsG0780038644.01 | 0.800278 | 1.553563e-48 | 7.204650e-46 |
| MsG0580025381.01 | MsG0780039252.01 | 0.822986 | 1.766040e-53 | 1.501402e-50 |
| MsG0580025381.01 | MsG0780039443.01 | 0.806379 | 8.465795e-50 | 4.588023e-47 |
| MsG0580025381.01 | MsG0780039655.01 | 0.843665 | 1.218168e-58 | 1.919720e-55 |
| MsG0580025381.01 | MsG0780039777.01 | 0.805182 | 1.510105e-49 | 7.937002e-47 |
| MsG0580025381.01 | MsG0780040074.01 | 0.806104 | 9.673981e-50 | 5.206220e-47 |
| MsG0580025381.01 | MsG0780040488.01 | 0.818162 | 2.263224e-52 | 1.681249e-49 |
| MsG0580025381.01 | MsG0780040669.01 | 0.840152 | 1.032946e-57 | 1.458463e-54 |
| MsG0580025381.01 | MsG0780040704.01 | 0.805270 | 1.447713e-49 | 7.625973e-47 |
| MsG0580025381.01 | MsG0780040788.01 | 0.805282 | 1.439364e-49 | 7.584255e-47 |
| MsG0580025381.01 | MsG0780041033.01 | 0.812151 | 4.898431e-51 | 3.090529e-48 |
| MsG0580025381.01 | MsG0780041305.01 | 0.810682 | 1.020965e-50 | 6.194516e-48 |
| MsG0580025381.01 | MsG0780041671.01 | 0.810158 | 1.324745e-50 | 7.926759e-48 |
| MsG0580025381.01 | MsG0780041764.01 | 0.804184 | 2.439984e-49 | 1.249851e-46 |
| MsG0580025381.01 | MsG0880042698.01 | 0.821758 | 3.405389e-53 | 2.795504e-50 |
| MsG0580025381.01 | MsG0880043479.01 | 0.804809 | 1.807567e-49 | 9.410169e-47 |
| MsG0580025381.01 | MsG0880043480.01 | 0.822952 | 1.798647e-53 | 1.527599e-50 |
| MsG0580025381.01 | MsG0880044573.01 | 0.812886 | 3.383498e-51 | 2.176789e-48 |
| MsG0580025381.01 | MsG0880044574.01 | 0.809571 | 1.771652e-50 | 1.043916e-47 |
| MsG0580025381.01 | MsG0880045372.01 | 0.830039 | 3.674709e-55 | 3.827173e-52 |
| MsG0580025381.01 | MsG0880045639.01 | 0.819395 | 1.187660e-52 | 9.128149e-50 |
| MsG0580025381.01 | MsG0880046020.01 | 0.818761 | 1.656241e-52 | 1.250888e-49 |
| MsG0580025381.01 | MsG0880046027.01 | 0.830194 | 3.368332e-55 | 3.524104e-52 |
| MsG0380014948.01 | MsG0580025381.01 | 0.814986 | 1.164934e-51 | 7.933049e-49 |
| MsG0380015039.01 | MsG0580025381.01 | 0.804350 | 2.253044e-49 | 1.159060e-46 |
| MsG0380015332.01 | MsG0580025381.01 | 0.818640 | 1.764291e-52 | 1.327938e-49 |
| MsG0380015436.01 | MsG0580025381.01 | 0.803666 | 3.127063e-49 | 1.580577e-46 |
| MsG0380015980.01 | MsG0580025381.01 | 0.819458 | 1.149414e-52 | 8.850382e-50 |
| MsG0380016234.01 | MsG0580025381.01 | 0.801994 | 6.925343e-49 | 3.354104e-46 |
| MsG0380016236.01 | MsG0580025381.01 | 0.829820 | 4.157149e-55 | 4.303247e-52 |
| MsG0380016517.01 | MsG0580025381.01 | 0.817066 | 3.997666e-52 | 2.881860e-49 |
| MsG0380017232.01 | MsG0580025381.01 | 0.803631 | 3.179062e-49 | 1.605484e-46 |
| MsG0380017233.01 | MsG0580025381.01 | 0.808508 | 2.991801e-50 | 1.713778e-47 |
| MsG0380017528.01 | MsG0580025381.01 | 0.803310 | 3.705755e-49 | 1.856043e-46 |
| MsG0480018251.01 | MsG0580025381.01 | 0.821114 | 4.795137e-53 | 3.866212e-50 |
| MsG0280006601.01 | MsG0580025381.01 | 0.800888 | 1.166580e-48 | 5.494588e-46 |
| MsG0280006692.01 | MsG0580025381.01 | 0.808094 | 3.666642e-50 | 2.077621e-47 |
| MsG0280007066.01 | MsG0580025381.01 | 0.812025 | 5.216558e-51 | 3.279867e-48 |
| MsG0280007072.01 | MsG0580025381.01 | 0.825563 | 4.379553e-54 | 4.006007e-51 |
| MsG0280007529.01 | MsG0580025381.01 | 0.826302 | 2.922442e-54 | 2.730159e-51 |
| MsG0280007547.01 | MsG0580025381.01 | 0.804224 | 2.394061e-49 | 1.227542e-46 |
| MsG0280008030.01 | MsG0580025381.01 | 0.826796 | 2.227988e-54 | 2.110922e-51 |
| MsG0280008100.01 | MsG0580025381.01 | 0.803030 | 4.233472e-49 | 2.105255e-46 |
| MsG0280008363.01 | MsG0580025381.01 | 0.853227 | 2.747345e-61 | 5.894802e-58 |
| MsG0280008615.01 | MsG0580025381.01 | 0.809493 | 1.841856e-50 | 1.082959e-47 |
| MsG0280008970.01 | MsG0580025381.01 | 0.822684 | 2.076163e-53 | 1.750028e-50 |
| MsG0280009748.01 | MsG0580025381.01 | 0.849802 | 2.559507e-60 | 4.909828e-57 |
| MsG0280010109.01 | MsG0580025381.01 | 0.833848 | 4.213141e-56 | 4.912434e-53 |
| MsG0280010443.01 | MsG0580025381.01 | 0.814101 | 1.828862e-51 | 1.215953e-48 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025381.01.T01 | MTR_5g027330 | 93.583 | 187 | 12 | 0 | 1 | 187 | 89 | 275 | 1.68e-129 | 374 |
| MsG0580025381.01.T01 | MTR_5g027370 | 92.513 | 187 | 14 | 0 | 1 | 187 | 78 | 264 | 6.81e-128 | 369 |
| MsG0580025381.01.T01 | MTR_6g046320 | 47.085 | 223 | 95 | 7 | 1 | 201 | 88 | 309 | 1.17e-53 | 179 |
| MsG0580025381.01.T01 | MTR_5g007940 | 45.188 | 239 | 89 | 8 | 1 | 201 | 76 | 310 | 1.40e-52 | 176 |
| MsG0580025381.01.T01 | MTR_5g021880 | 44.118 | 238 | 93 | 7 | 1 | 201 | 88 | 322 | 2.10e-52 | 176 |
| MsG0580025381.01.T01 | MTR_5g021880 | 44.118 | 238 | 93 | 7 | 1 | 201 | 88 | 322 | 2.75e-52 | 176 |
| MsG0580025381.01.T01 | MTR_0627s0010 | 48.768 | 203 | 86 | 6 | 1 | 186 | 87 | 288 | 3.55e-52 | 174 |
| MsG0580025381.01.T01 | MTR_5g021880 | 44.351 | 239 | 91 | 7 | 1 | 201 | 88 | 322 | 3.90e-52 | 176 |
| MsG0580025381.01.T01 | MTR_5g021860 | 42.017 | 238 | 96 | 8 | 1 | 201 | 79 | 311 | 2.44e-48 | 165 |
| MsG0580025381.01.T01 | MTR_5g021860 | 42.017 | 238 | 96 | 8 | 1 | 201 | 79 | 311 | 3.30e-48 | 166 |
| MsG0580025381.01.T01 | MTR_4g027370 | 41.597 | 238 | 97 | 8 | 1 | 201 | 79 | 311 | 1.10e-47 | 165 |
| MsG0580025381.01.T01 | MTR_7g117100 | 41.778 | 225 | 91 | 7 | 14 | 201 | 1 | 222 | 2.52e-47 | 158 |
| MsG0580025381.01.T01 | MTR_5g022040 | 41.224 | 245 | 97 | 8 | 1 | 201 | 89 | 330 | 9.97e-47 | 162 |
| MsG0580025381.01.T01 | MTR_7g117100 | 41.778 | 225 | 91 | 7 | 14 | 201 | 1 | 222 | 2.12e-46 | 158 |
| MsG0580025381.01.T01 | MTR_5g022900 | 41.949 | 236 | 99 | 5 | 1 | 201 | 81 | 313 | 3.22e-46 | 160 |
| MsG0580025381.01.T01 | MTR_5g010550 | 41.410 | 227 | 100 | 8 | 5 | 201 | 109 | 332 | 2.10e-41 | 147 |
| MsG0580025381.01.T01 | MTR_5g010550 | 41.410 | 227 | 100 | 8 | 5 | 201 | 95 | 318 | 2.10e-41 | 147 |
| MsG0580025381.01.T01 | MTR_5g010560 | 41.333 | 225 | 101 | 8 | 5 | 201 | 95 | 316 | 2.40e-41 | 147 |
| MsG0580025381.01.T01 | MTR_5g010610 | 43.192 | 213 | 93 | 8 | 5 | 192 | 85 | 294 | 5.21e-41 | 147 |
| MsG0580025381.01.T01 | MTR_7g090810 | 40.097 | 207 | 100 | 6 | 1 | 187 | 69 | 271 | 1.81e-39 | 141 |
| MsG0580025381.01.T01 | MTR_5g021920 | 45.251 | 179 | 72 | 5 | 1 | 154 | 89 | 266 | 1.39e-36 | 130 |
| MsG0580025381.01.T01 | MTR_5g022045 | 39.631 | 217 | 104 | 9 | 1 | 201 | 84 | 289 | 2.02e-34 | 128 |
| MsG0580025381.01.T01 | MTR_5g010660 | 42.135 | 178 | 77 | 6 | 20 | 174 | 74 | 248 | 7.90e-33 | 124 |
| MsG0580025381.01.T01 | MTR_5g022750 | 41.579 | 190 | 89 | 7 | 1 | 183 | 68 | 242 | 9.89e-32 | 120 |
| MsG0580025381.01.T01 | MTR_5g022090 | 40.237 | 169 | 65 | 5 | 42 | 201 | 106 | 247 | 6.06e-30 | 115 |
| MsG0580025381.01.T01 | MTR_7g090810 | 47.009 | 117 | 50 | 3 | 81 | 187 | 13 | 127 | 7.44e-29 | 110 |
| MsG0580025381.01.T01 | MTR_3g058440 | 33.803 | 142 | 81 | 7 | 49 | 182 | 117 | 253 | 8.48e-12 | 63.9 |
| MsG0580025381.01.T01 | MTR_4g134560 | 31.250 | 128 | 73 | 5 | 64 | 184 | 171 | 290 | 7.97e-11 | 61.6 |
| MsG0580025381.01.T01 | MTR_3g007410 | 32.624 | 141 | 79 | 8 | 65 | 194 | 144 | 279 | 8.81e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 47 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATAAACTCACCTATAAT+TGG | 0.195781 | 5:+17707930 | None:intergenic |
| TTGGATTGCAAACAACTAAA+TGG | 0.256730 | 5:+17707949 | None:intergenic |
| CGAAGAGGAAGCTTGAATTT+AGG | 0.256929 | 5:+17708083 | None:intergenic |
| ACTAAATGGTTTACAGTATA+TGG | 0.269751 | 5:+17707963 | None:intergenic |
| GTTGTTTGCAATCCAATTAT+AGG | 0.274778 | 5:-17707942 | MsG0580025381.01.T01:CDS |
| GTCAAGAACTCTGCACCTTT+TGG | 0.278220 | 5:-17708162 | MsG0580025381.01.T01:CDS |
| AAGCCAGAAGATGACAAATT+TGG | 0.279629 | 5:-17708026 | MsG0580025381.01.T01:CDS |
| AATAAACTTTCATATTCTTC+TGG | 0.295776 | 5:+17705664 | None:intergenic |
| ACCTAAAACTAATGAATATA+AGG | 0.297161 | 5:-17707844 | MsG0580025381.01.T01:CDS |
| CATCACTTGGTTTCATGCTT+CGG | 0.330265 | 5:-17708205 | None:intergenic |
| TTGTCATCTTCTGGCTTGTA+AGG | 0.344343 | 5:+17708032 | None:intergenic |
| ACACCAAATTTGTCATCTTC+TGG | 0.364559 | 5:+17708023 | None:intergenic |
| TTTGCAATTCCGATAGCTTC+TGG | 0.394838 | 5:+17707903 | None:intergenic |
| GGATCTCCAACTTGTGTGAA+TGG | 0.405995 | 5:-17707690 | MsG0580025381.01.T01:CDS |
| TTATGCTGAGGAGGAGGAGG+CGG | 0.423279 | 5:+17707571 | None:intergenic |
| TATGCTGAGGAGGAGGAGGC+GGG | 0.430285 | 5:+17707572 | None:intergenic |
| GTGCTATAAATCTAATGTTA+TGG | 0.449497 | 5:-17707790 | MsG0580025381.01.T01:CDS |
| GTGTGAATGGGGCACTTCAT+TGG | 0.451652 | 5:-17707677 | MsG0580025381.01.T01:CDS |
| TCTTCTGGCTTGTAAGGAGT+TGG | 0.454253 | 5:+17708038 | None:intergenic |
| TGCTGAGGAGGAGGAGGCGG+GGG | 0.454756 | 5:+17707574 | None:intergenic |
| AAGCCAAGAGCAGCACATAT+TGG | 0.457388 | 5:+17707870 | None:intergenic |
| GATCTCCAACTTGTGTGAAT+GGG | 0.474088 | 5:-17707689 | MsG0580025381.01.T01:CDS |
| TAAACAAAGCAAGCCATTGC+AGG | 0.482465 | 5:+17707992 | None:intergenic |
| CTTCATTGGATCAATTATGA+TGG | 0.490698 | 5:-17707663 | MsG0580025381.01.T01:CDS |
| CTATCGGAATTGCAAATACT+CGG | 0.499738 | 5:-17707896 | MsG0580025381.01.T01:CDS |
| AAACCAATATGTGCTGCTCT+TGG | 0.506487 | 5:-17707873 | MsG0580025381.01.T01:CDS |
| GCCTCGTAAATGAAAACATA+GGG | 0.544143 | 5:+17707715 | None:intergenic |
| AGTGCCCCATTCACACAAGT+TGG | 0.544795 | 5:+17707684 | None:intergenic |
| AGAATGTGGAAGAGATGTGA+TGG | 0.556673 | 5:-17707816 | MsG0580025381.01.T01:CDS |
| TATGATGGCAAGAAAAGATA+CGG | 0.560189 | 5:-17707648 | MsG0580025381.01.T01:CDS |
| AGCCTCGTAAATGAAAACAT+AGG | 0.562731 | 5:+17707714 | None:intergenic |
| AATATAAGGTGATAAGAATG+TGG | 0.570980 | 5:-17707830 | MsG0580025381.01.T01:CDS |
| GGTGTGGTGAATTCCTGCAA+TGG | 0.578774 | 5:-17708005 | MsG0580025381.01.T01:CDS |
| CGACATCAATGTTGAATGCA+CGG | 0.587202 | 5:+17708117 | None:intergenic |
| ATAAGACTACCAGAAGCTAT+CGG | 0.606589 | 5:-17707912 | MsG0580025381.01.T01:CDS |
| ATGCTGAGGAGGAGGAGGCG+GGG | 0.613952 | 5:+17707573 | None:intergenic |
| TATTTCATATAGGTGTGCAA+AGG | 0.617585 | 5:-17705695 | MsG0580025381.01.T01:intron |
| GGTTGTTGAAATGCACACAC+TGG | 0.627689 | 5:-17707769 | MsG0580025381.01.T01:CDS |
| GTTGTTGAAATGCACACACT+GGG | 0.644611 | 5:-17707768 | MsG0580025381.01.T01:CDS |
| ATCTCCAACTTGTGTGAATG+GGG | 0.645358 | 5:-17707688 | MsG0580025381.01.T01:CDS |
| GAATGTGGAAGAGATGTGAT+GGG | 0.647273 | 5:-17707815 | MsG0580025381.01.T01:CDS |
| ACACACTGGGAACGACAACA+TGG | 0.664953 | 5:-17707755 | MsG0580025381.01.T01:CDS |
| GTGTCATTAGCATTGCGAAG+AGG | 0.667599 | 5:+17708068 | None:intergenic |
| TAAAAGACAGAGCATCACCA+TGG | 0.699408 | 5:-17707551 | MsG0580025381.01.T01:intron |
| AACGACAACATGGAGGACTG+TGG | 0.705442 | 5:-17707745 | MsG0580025381.01.T01:CDS |
| AGAAGATGACAAATTTGGTG+TGG | 0.720653 | 5:-17708021 | MsG0580025381.01.T01:CDS |
| CACTGGGAACGACAACATGG+AGG | 0.757984 | 5:-17707752 | MsG0580025381.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGAAATAACAAAATATT+AGG | + | Chr5:17708131-17708150 | None:intergenic | 10.0% |
| !! | ATATTGATATTATTTCATAT+AGG | - | Chr5:17706935-17706954 | MsG0580025381.01.T01:intron | 10.0% |
| !! | TATGAAATAACAAAATATTA+GGG | + | Chr5:17708130-17708149 | None:intergenic | 10.0% |
| !!! | AATATTTTGTTATTTCATAT+AGG | - | Chr5:17708131-17708150 | MsG0580025381.01.T01:CDS | 10.0% |
| !!! | ATAATTTTTATGTTTTCAAA+TGG | - | Chr5:17707261-17707280 | MsG0580025381.01.T01:intron | 10.0% |
| !! | AAATCAAAATAATTTGATAC+TGG | - | Chr5:17706742-17706761 | MsG0580025381.01.T01:intron | 15.0% |
| !! | AATCAAAATAATTTGATACT+GGG | - | Chr5:17706743-17706762 | MsG0580025381.01.T01:intron | 15.0% |
| !! | ATAAAAGCAATAAATTCATT+AGG | + | Chr5:17706720-17706739 | None:intergenic | 15.0% |
| !! | CATAATAAAAACTTATAGTT+TGG | + | Chr5:17707147-17707166 | None:intergenic | 15.0% |
| !! | TAATATTGAAGTAATTACAA+TGG | - | Chr5:17707685-17707704 | MsG0580025381.01.T01:CDS | 15.0% |
| !! | TGAAAAGAGTTATATATTAA+GGG | - | Chr5:17707335-17707354 | MsG0580025381.01.T01:intron | 15.0% |
| !! | TTGAAAAGAGTTATATATTA+AGG | - | Chr5:17707334-17707353 | MsG0580025381.01.T01:intron | 15.0% |
| !! | TTTCAAATGGTAAATTATAT+AGG | - | Chr5:17707274-17707293 | MsG0580025381.01.T01:intron | 15.0% |
| !!! | AAGAATATTAGTTATTTCAT+TGG | - | Chr5:17706980-17706999 | MsG0580025381.01.T01:intron | 15.0% |
| !!! | AATTTAGAATATGAGTTTTA+TGG | + | Chr5:17707994-17708013 | None:intergenic | 15.0% |
| !!! | ATTTAGAATATGAGTTTTAT+GGG | + | Chr5:17707993-17708012 | None:intergenic | 15.0% |
| !!! | CAAAATAATGCATTTTTATT+GGG | + | Chr5:17707804-17707823 | None:intergenic | 15.0% |
| !! | AAAAAAATAAAAGCAGATGT+TGG | - | Chr5:17706819-17706838 | MsG0580025381.01.T01:intron | 20.0% |
| !! | AAGTAATTACAATGGTATTA+TGG | - | Chr5:17707693-17707712 | MsG0580025381.01.T01:CDS | 20.0% |
| !! | AATAAACTTTCATATTCTTC+TGG | + | Chr5:17708175-17708194 | None:intergenic | 20.0% |
| !! | AATAGACGAAAGAATAAAAA+CGG | + | Chr5:17707614-17707633 | None:intergenic | 20.0% |
| !! | ACCTAAAACTAATGAATATA+AGG | - | Chr5:17705992-17706011 | MsG0580025381.01.T01:intron | 20.0% |
| !! | AGAGAATAATATCGATATTA+GGG | + | Chr5:17706906-17706925 | None:intergenic | 20.0% |
| !! | ATATTCTAAATTATACGACA+AGG | - | Chr5:17708002-17708021 | MsG0580025381.01.T01:CDS | 20.0% |
| !! | GGCAATTTAAAAGAAAATAT+CGG | + | Chr5:17706699-17706718 | None:intergenic | 20.0% |
| !! | TAGAGAATAATATCGATATT+AGG | + | Chr5:17706907-17706926 | None:intergenic | 20.0% |
| !!! | AACAGTTTTATAATTAGGAA+AGG | - | Chr5:17707376-17707395 | MsG0580025381.01.T01:intron | 20.0% |
| !!! | ACCTTATATTCATTAGTTTT+AGG | + | Chr5:17705996-17706015 | None:intergenic | 20.0% |
| !!! | ATAAAATGAAGTTATTTCCT+CGG | + | Chr5:17707504-17707523 | None:intergenic | 20.0% |
| !!! | GAAAAGTAGTAAAATGTTTT+AGG | - | Chr5:17708044-17708063 | MsG0580025381.01.T01:CDS | 20.0% |
| !!! | GAAATAACTTCATTTTATTC+TGG | - | Chr5:17707506-17707525 | MsG0580025381.01.T01:intron | 20.0% |
| !!! | GCAAAATAATGCATTTTTAT+TGG | + | Chr5:17707805-17707824 | None:intergenic | 20.0% |
| !!! | GCAAAATAATGGATTTTTAT+TGG | + | Chr5:17707866-17707885 | None:intergenic | 20.0% |
| !!! | TATATTCATTAGTTTTAGGT+TGG | + | Chr5:17705992-17706011 | None:intergenic | 20.0% |
| !!! | TGGAAAACAGTTTTATAATT+AGG | - | Chr5:17707371-17707390 | MsG0580025381.01.T01:intron | 20.0% |
| ! | AAAACAAAACATTGCAATGA+TGG | - | Chr5:17707727-17707746 | MsG0580025381.01.T01:CDS | 25.0% |
| ! | AATATAAGGTGATAAGAATG+TGG | - | Chr5:17706006-17706025 | MsG0580025381.01.T01:intron | 25.0% |
| ! | ACTAAATGGTTTACAGTATA+TGG | + | Chr5:17705876-17705895 | None:intergenic | 25.0% |
| ! | ATAATGCTTATGTGAACTTT+AGG | - | Chr5:17707560-17707579 | MsG0580025381.01.T01:CDS | 25.0% |
| ! | ATAGAAATCATTAATGCATG+AGG | - | Chr5:17707308-17707327 | MsG0580025381.01.T01:intron | 25.0% |
| ! | CTTATAAACTCACCTATAAT+TGG | + | Chr5:17705909-17705928 | None:intergenic | 25.0% |
| ! | GTGCTATAAATCTAATGTTA+TGG | - | Chr5:17706046-17706065 | MsG0580025381.01.T01:intron | 25.0% |
| ! | TAAGATATATTCATCTTCGA+TGG | + | Chr5:17707479-17707498 | None:intergenic | 25.0% |
| ! | TAAGCATAAACATTCTTGTA+TGG | - | Chr5:17707412-17707431 | MsG0580025381.01.T01:intron | 25.0% |
| ! | TAAGCATTATTCTCTGATAT+TGG | + | Chr5:17707550-17707569 | None:intergenic | 25.0% |
| ! | TTGAAATTAATTGTGTGACA+TGG | - | Chr5:17707914-17707933 | MsG0580025381.01.T01:CDS | 25.0% |
| !! | AAATTATACGACAAGGTTTT+GGG | - | Chr5:17708009-17708028 | MsG0580025381.01.T01:CDS | 25.0% |
| !! | GAATCATAAAGACAAGTTTT+TGG | + | Chr5:17707664-17707683 | None:intergenic | 25.0% |
| !! | TAAAATGAAGTTATTTCCTC+GGG | + | Chr5:17707503-17707522 | None:intergenic | 25.0% |
| !! | TAAATTATACGACAAGGTTT+TGG | - | Chr5:17708008-17708027 | MsG0580025381.01.T01:CDS | 25.0% |
| !!! | ATCATTGCAATGTTTTGTTT+TGG | + | Chr5:17707728-17707747 | None:intergenic | 25.0% |
| AAAACATTGCAATGATGGTA+AGG | - | Chr5:17707732-17707751 | MsG0580025381.01.T01:CDS | 30.0% | |
| AAAATAACCATAGAAGAGCA+GGG | + | Chr5:17707896-17707915 | None:intergenic | 30.0% | |
| AAATCCCTTTAATTCTACCA+TGG | + | Chr5:17706305-17706324 | None:intergenic | 30.0% | |
| ACAAATTTACAGACATCGAA+TGG | + | Chr5:17707955-17707974 | None:intergenic | 30.0% | |
| AGTGTGGCTTATGAAAAAAA+CGG | - | Chr5:17706360-17706379 | MsG0580025381.01.T01:intron | 30.0% | |
| ATAAAAGGAATCACAGCTAT+AGG | + | Chr5:17706511-17706530 | None:intergenic | 30.0% | |
| ATCACCATGGTAGAATTAAA+GGG | - | Chr5:17706298-17706317 | MsG0580025381.01.T01:intron | 30.0% | |
| CAAATTTACAGACATCGAAT+GGG | + | Chr5:17707954-17707973 | None:intergenic | 30.0% | |
| CCAGTAAAACACTTTGATAA+TGG | - | Chr5:17706459-17706478 | MsG0580025381.01.T01:intron | 30.0% | |
| CTACATAAACCAAAACAAGA+GGG | + | Chr5:17706438-17706457 | None:intergenic | 30.0% | |
| CTTCATTGGATCAATTATGA+TGG | - | Chr5:17706173-17706192 | MsG0580025381.01.T01:intron | 30.0% | |
| GAAAGAATAAAAACGGATGT+TGG | + | Chr5:17707607-17707626 | None:intergenic | 30.0% | |
| GCTTATGAAAAAAACGGTAT+CGG | - | Chr5:17706366-17706385 | MsG0580025381.01.T01:intron | 30.0% | |
| GGGAATTCCATTGAAATTAT+CGG | + | Chr5:17706418-17706437 | None:intergenic | 30.0% | |
| GGTATTTAGAAGAGTAGTAT+TGG | - | Chr5:17707204-17707223 | MsG0580025381.01.T01:intron | 30.0% | |
| GTGTAACAACTACTAATATG+AGG | + | Chr5:17707030-17707049 | None:intergenic | 30.0% | |
| GTTGTTTGCAATCCAATTAT+AGG | - | Chr5:17705894-17705913 | MsG0580025381.01.T01:intron | 30.0% | |
| TATGATGGCAAGAAAAGATA+CGG | - | Chr5:17706188-17706207 | MsG0580025381.01.T01:intron | 30.0% | |
| TATTTCATATAGGTGTGCAA+AGG | - | Chr5:17706945-17706964 | MsG0580025381.01.T01:intron | 30.0% | |
| TCAAAGTTTATTCCGTTGAT+GGG | - | Chr5:17706555-17706574 | MsG0580025381.01.T01:intron | 30.0% | |
| TGATAAGTAGTAGACACTAT+TGG | - | Chr5:17706796-17706815 | MsG0580025381.01.T01:intron | 30.0% | |
| TTAAGGGACAAAAAAAAGAG+TGG | - | Chr5:17707351-17707370 | MsG0580025381.01.T01:intron | 30.0% | |
| TTCAAAGTTTATTCCGTTGA+TGG | - | Chr5:17706554-17706573 | MsG0580025381.01.T01:intron | 30.0% | |
| TTGGATTGCAAACAACTAAA+TGG | + | Chr5:17705890-17705909 | None:intergenic | 30.0% | |
| ! | ATAGGACTTTTGTATCAACA+AGG | + | Chr5:17706493-17706512 | None:intergenic | 30.0% |
| ! | GCGTACACATTTTTAAACTA+TGG | + | Chr5:17707837-17707856 | None:intergenic | 30.0% |
| ! | TAAATACCCGTGAATTTTGT+TGG | + | Chr5:17707192-17707211 | None:intergenic | 30.0% |
| ! | TGGAGGGTCTTATAAAAATA+AGG | + | Chr5:17707172-17707191 | None:intergenic | 30.0% |
| ! | TGTCTGGTTCATAGTATAAA+AGG | + | Chr5:17706526-17706545 | None:intergenic | 30.0% |
| !! | CCATTATCAAAGTGTTTTAC+TGG | + | Chr5:17706462-17706481 | None:intergenic | 30.0% |
| !! | GTAAAACACTTTGATAATGG+TGG | - | Chr5:17706462-17706481 | MsG0580025381.01.T01:intron | 30.0% |
| AAGCCAGAAGATGACAAATT+TGG | - | Chr5:17705810-17705829 | MsG0580025381.01.T01:intron | 35.0% | |
| AATTGTGTGACATGGAAGAA+CGG | - | Chr5:17707922-17707941 | MsG0580025381.01.T01:CDS | 35.0% | |
| ACACCAAATTTGTCATCTTC+TGG | + | Chr5:17705816-17705835 | None:intergenic | 35.0% | |
| ACTTTGAATACGTGTTTGTC+TGG | + | Chr5:17706542-17706561 | None:intergenic | 35.0% | |
| AGCCTCGTAAATGAAAACAT+AGG | + | Chr5:17706125-17706144 | None:intergenic | 35.0% | |
| ATAAGACTACCAGAAGCTAT+CGG | - | Chr5:17705924-17705943 | MsG0580025381.01.T01:intron | 35.0% | |
| ATGAGGGAATAATTCAACCA+GGG | + | Chr5:17706590-17706609 | None:intergenic | 35.0% | |
| CAAAATAACCATAGAAGAGC+AGG | + | Chr5:17707897-17707916 | None:intergenic | 35.0% | |
| CAAAGTTTATTCCGTTGATG+GGG | - | Chr5:17706556-17706575 | MsG0580025381.01.T01:intron | 35.0% | |
| CATCACCATGGTAGAATTAA+AGG | - | Chr5:17706297-17706316 | MsG0580025381.01.T01:intron | 35.0% | |
| CCTACATAAACCAAAACAAG+AGG | + | Chr5:17706439-17706458 | None:intergenic | 35.0% | |
| CTATCGGAATTGCAAATACT+CGG | - | Chr5:17705940-17705959 | MsG0580025381.01.T01:intron | 35.0% | |
| GATGAATATATCTTAACCCG+AGG | - | Chr5:17707484-17707503 | MsG0580025381.01.T01:intron | 35.0% | |
| GCAATGATGGTAAGGATTAA+AGG | - | Chr5:17707740-17707759 | MsG0580025381.01.T01:CDS | 35.0% | |
| GCCTCGTAAATGAAAACATA+GGG | + | Chr5:17706124-17706143 | None:intergenic | 35.0% | |
| TATGAGGGAATAATTCAACC+AGG | + | Chr5:17706591-17706610 | None:intergenic | 35.0% | |
| TCATTGAAGGATGTTGTCAA+AGG | - | Chr5:17706625-17706644 | MsG0580025381.01.T01:intron | 35.0% | |
| TGTATGGCAACTACTTTCTT+AGG | - | Chr5:17707428-17707447 | MsG0580025381.01.T01:intron | 35.0% | |
| TTCTGCTCCGATAATTTCAA+TGG | - | Chr5:17706408-17706427 | MsG0580025381.01.T01:intron | 35.0% | |
| ! | ACCCTATGTTTTCATTTACG+AGG | - | Chr5:17706120-17706139 | MsG0580025381.01.T01:intron | 35.0% |
| ! | AGAAGATGACAAATTTGGTG+TGG | - | Chr5:17705815-17705834 | MsG0580025381.01.T01:intron | 35.0% |
| ! | ATGTTTTCATTTACGAGGCT+TGG | - | Chr5:17706125-17706144 | MsG0580025381.01.T01:intron | 35.0% |
| ! | TTTTAGGCTGATACTCCAAA+AGG | + | Chr5:17705692-17705711 | None:intergenic | 35.0% |
| !! | AAACACTTTGATAATGGTGG+CGG | - | Chr5:17706465-17706484 | MsG0580025381.01.T01:intron | 35.0% |
| !! | AATGGAATTCCCTCTTGTTT+TGG | - | Chr5:17706426-17706445 | MsG0580025381.01.T01:intron | 35.0% |
| !! | ATGAGTTTTATGGGCATACA+CGG | + | Chr5:17707984-17708003 | None:intergenic | 35.0% |
| !!! | CCTCTTGTTTTGGTTTATGT+AGG | - | Chr5:17706436-17706455 | MsG0580025381.01.T01:intron | 35.0% |
| ACCAACATCCTTACCTTGTA+TGG | + | Chr5:17706675-17706694 | None:intergenic | 40.0% | |
| ACTCCAATTTCAGATAGCAG+CGG | + | Chr5:17706863-17706882 | None:intergenic | 40.0% | |
| AGAATGTGGAAGAGATGTGA+TGG | - | Chr5:17706020-17706039 | MsG0580025381.01.T01:intron | 40.0% | |
| AGACCCTCCAACAAAATTCA+CGG | - | Chr5:17707182-17707201 | MsG0580025381.01.T01:intron | 40.0% | |
| AGGGTGAGGTAGCAAAATAA+TGG | + | Chr5:17707877-17707896 | None:intergenic | 40.0% | |
| ATCTCCAACTTGTGTGAATG+GGG | - | Chr5:17706148-17706167 | MsG0580025381.01.T01:intron | 40.0% | |
| CAGAATGTCCATACAAGGTA+AGG | - | Chr5:17706664-17706683 | MsG0580025381.01.T01:intron | 40.0% | |
| CGAAGAGGAAGCTTGAATTT+AGG | + | Chr5:17705756-17705775 | None:intergenic | 40.0% | |
| CGACATCAATGTTGAATGCA+CGG | + | Chr5:17705722-17705741 | None:intergenic | 40.0% | |
| CTGTGAATTCTTGTGTAGTG+TGG | - | Chr5:17706344-17706363 | MsG0580025381.01.T01:intron | 40.0% | |
| CTTATGTGAACTTTAGGCAG+TGG | - | Chr5:17707566-17707585 | MsG0580025381.01.T01:CDS | 40.0% | |
| GAATGTGGAAGAGATGTGAT+GGG | - | Chr5:17706021-17706040 | MsG0580025381.01.T01:intron | 40.0% | |
| GAATTATTCCCTCATAGTCC+AGG | - | Chr5:17706595-17706614 | MsG0580025381.01.T01:intron | 40.0% | |
| GATCTCCAACTTGTGTGAAT+GGG | - | Chr5:17706147-17706166 | MsG0580025381.01.T01:intron | 40.0% | |
| GTGTGCAAAGCTGAAATTGT+TGG | - | Chr5:17706957-17706976 | MsG0580025381.01.T01:intron | 40.0% | |
| GTTGTTGAAATGCACACACT+GGG | - | Chr5:17706068-17706087 | MsG0580025381.01.T01:intron | 40.0% | |
| TAAACAAAGCAAGCCATTGC+AGG | + | Chr5:17705847-17705866 | None:intergenic | 40.0% | |
| TCCATACAAGGTAAGGATGT+TGG | - | Chr5:17706671-17706690 | MsG0580025381.01.T01:intron | 40.0% | |
| TGTCAAAGGAAGCAACATTG+TGG | - | Chr5:17706639-17706658 | MsG0580025381.01.T01:intron | 40.0% | |
| TTTGCAATTCCGATAGCTTC+TGG | + | Chr5:17705936-17705955 | None:intergenic | 40.0% | |
| ! | AAACCAATATGTGCTGCTCT+TGG | - | Chr5:17705963-17705982 | MsG0580025381.01.T01:intron | 40.0% |
| ! | AATGCACGGCGAAACTTTTT+AGG | + | Chr5:17705708-17705727 | None:intergenic | 40.0% |
| ! | ATACCCGTGAATTTTGTTGG+AGG | + | Chr5:17707189-17707208 | None:intergenic | 40.0% |
| ! | ATGCTCTGTCTTTTATGCTG+AGG | + | Chr5:17706280-17706299 | None:intergenic | 40.0% |
| ! | TAAAAGACAGAGCATCACCA+TGG | - | Chr5:17706285-17706304 | MsG0580025381.01.T01:intron | 40.0% |
| ! | TACCCGTGAATTTTGTTGGA+GGG | + | Chr5:17707188-17707207 | None:intergenic | 40.0% |
| ! | TATCGGTGAATCATGGACTA+GGG | - | Chr5:17706383-17706402 | MsG0580025381.01.T01:intron | 40.0% |
| !! | AAAACGGTATCGGTGAATCA+TGG | - | Chr5:17706376-17706395 | MsG0580025381.01.T01:intron | 40.0% |
| !! | TTGTCATCTTCTGGCTTGTA+AGG | + | Chr5:17705807-17705826 | None:intergenic | 40.0% |
| AAGCCAAGAGCAGCACATAT+TGG | + | Chr5:17705969-17705988 | None:intergenic | 45.0% | |
| AGATGAGACCTGGACTATGA+GGG | + | Chr5:17706606-17706625 | None:intergenic | 45.0% | |
| ATGTGAACTTTAGGCAGTGG+TGG | - | Chr5:17707569-17707588 | MsG0580025381.01.T01:CDS | 45.0% | |
| CTCCAATTTCAGATAGCAGC+GGG | + | Chr5:17706862-17706881 | None:intergenic | 45.0% | |
| GACCCTCCAACAAAATTCAC+GGG | - | Chr5:17707183-17707202 | MsG0580025381.01.T01:intron | 45.0% | |
| GGATCTCCAACTTGTGTGAA+TGG | - | Chr5:17706146-17706165 | MsG0580025381.01.T01:intron | 45.0% | |
| GGTTGTTGAAATGCACACAC+TGG | - | Chr5:17706067-17706086 | MsG0580025381.01.T01:intron | 45.0% | |
| TCCAGGTCTCATCTCATTGA+AGG | - | Chr5:17706612-17706631 | MsG0580025381.01.T01:intron | 45.0% | |
| TCCTTCAATGAGATGAGACC+TGG | + | Chr5:17706616-17706635 | None:intergenic | 45.0% | |
| TGGTGCAGAATGTCCATACA+AGG | - | Chr5:17706659-17706678 | MsG0580025381.01.T01:intron | 45.0% | |
| ! | CTCTGTCTTTTATGCTGAGG+AGG | + | Chr5:17706277-17706296 | None:intergenic | 45.0% |
| ! | GTATCGGTGAATCATGGACT+AGG | - | Chr5:17706382-17706401 | MsG0580025381.01.T01:intron | 45.0% |
| ! | GTCAAGAACTCTGCACCTTT+TGG | - | Chr5:17705674-17705693 | MsG0580025381.01.T01:CDS | 45.0% |
| ! | GTGTCATTAGCATTGCGAAG+AGG | + | Chr5:17705771-17705790 | None:intergenic | 45.0% |
| ! | TGTCTTTTATGCTGAGGAGG+AGG | + | Chr5:17706274-17706293 | None:intergenic | 45.0% |
| !! | TCTTCTGGCTTGTAAGGAGT+TGG | + | Chr5:17705801-17705820 | None:intergenic | 45.0% |
| !!! | ACAAGGTTTTGGGTCTGCTT+TGG | - | Chr5:17708019-17708038 | MsG0580025381.01.T01:CDS | 45.0% |
| AACCATAGAAGAGCAGGGTG+AGG | + | Chr5:17707891-17707910 | None:intergenic | 50.0% | |
| AACGACAACATGGAGGACTG+TGG | - | Chr5:17706091-17706110 | MsG0580025381.01.T01:intron | 50.0% | |
| ACACACTGGGAACGACAACA+TGG | - | Chr5:17706081-17706100 | MsG0580025381.01.T01:intron | 50.0% | |
| AGTGCCCCATTCACACAAGT+TGG | + | Chr5:17706155-17706174 | None:intergenic | 50.0% | |
| GAGATGAGACCTGGACTATG+AGG | + | Chr5:17706607-17706626 | None:intergenic | 50.0% | |
| GGTGTGGTGAATTCCTGCAA+TGG | - | Chr5:17705831-17705850 | MsG0580025381.01.T01:intron | 50.0% | |
| TACCTCACCCTGCTCTTCTA+TGG | - | Chr5:17707886-17707905 | MsG0580025381.01.T01:CDS | 50.0% | |
| ! | CTTTTATGCTGAGGAGGAGG+AGG | + | Chr5:17706271-17706290 | None:intergenic | 50.0% |
| ! | GACCCGCTGCTATCTGAAAT+TGG | - | Chr5:17706857-17706876 | MsG0580025381.01.T01:intron | 50.0% |
| ! | GTGTGAATGGGGCACTTCAT+TGG | - | Chr5:17706159-17706178 | MsG0580025381.01.T01:intron | 50.0% |
| CACTGGGAACGACAACATGG+AGG | - | Chr5:17706084-17706103 | MsG0580025381.01.T01:intron | 55.0% | |
| GGGTGATACAGCCCCATCAA+CGG | + | Chr5:17706570-17706589 | None:intergenic | 55.0% | |
| TTATGCTGAGGAGGAGGAGG+CGG | + | Chr5:17706268-17706287 | None:intergenic | 55.0% | |
| TTGATGGGGCTGTATCACCC+TGG | - | Chr5:17706570-17706589 | MsG0580025381.01.T01:intron | 55.0% | |
| TATGCTGAGGAGGAGGAGGC+GGG | + | Chr5:17706267-17706286 | None:intergenic | 60.0% | |
| ATGCTGAGGAGGAGGAGGCG+GGG | + | Chr5:17706266-17706285 | None:intergenic | 65.0% | |
| AGGAGGCGGGGGAGAAGGGA+AGG | + | Chr5:17706254-17706273 | None:intergenic | 70.0% | |
| GAGGAGGAGGCGGGGGAGAA+GGG | + | Chr5:17706258-17706277 | None:intergenic | 70.0% | |
| TGCTGAGGAGGAGGAGGCGG+GGG | + | Chr5:17706265-17706284 | None:intergenic | 70.0% | |
| GGAGGAGGAGGCGGGGGAGA+AGG | + | Chr5:17706259-17706278 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 17705645 | 17708213 | 17705645 | ID=MsG0580025381.01;Name=MsG0580025381.01 |
| Chr5 | mRNA | 17705645 | 17708213 | 17705645 | ID=MsG0580025381.01.T01;Parent=MsG0580025381.01;Name=MsG0580025381.01.T01;_AED=0.45;_eAED=0.50;_QI=0|0|0|1|0|0|2|0|240 |
| Chr5 | exon | 17707552 | 17708213 | 17707552 | ID=MsG0580025381.01.T01:exon:19045;Parent=MsG0580025381.01.T01 |
| Chr5 | exon | 17705645 | 17705705 | 17705645 | ID=MsG0580025381.01.T01:exon:19044;Parent=MsG0580025381.01.T01 |
| Chr5 | CDS | 17707552 | 17708213 | 17707552 | ID=MsG0580025381.01.T01:cds;Parent=MsG0580025381.01.T01 |
| Chr5 | CDS | 17705645 | 17705705 | 17705645 | ID=MsG0580025381.01.T01:cds;Parent=MsG0580025381.01.T01 |
| Gene Sequence |
| Protein sequence |
