AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0398500


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0398500 MtrunA17_Chr3g0086691 92.120 368 29 0 8 375 149 516 0.0 707
Msa0398500 MtrunA17_Chr3g0086661 79.620 368 75 0 8 375 149 516 0.0 602
Msa0398500 MtrunA17_Chr3g0086651 79.076 368 77 0 8 375 149 516 0.0 599
Msa0398500 MtrunA17_Chr4g0061381 70.219 366 103 3 8 371 148 509 0.0 546
Msa0398500 MtrunA17_Chr3g0094171 50.275 364 172 6 9 371 158 513 4.14e-126 372
Msa0398500 MtrunA17_Chr3g0094231 45.604 364 187 5 8 371 153 505 4.52e-116 347
Msa0398500 MtrunA17_Chr8g0344151 43.909 353 188 5 23 372 166 511 3.16e-101 308
Msa0398500 MtrunA17_Chr8g0344181 43.503 354 190 6 22 372 167 513 3.93e-99 303
Msa0398500 MtrunA17_Chr3g0086681 74.566 173 44 0 203 375 6 178 2.07e-97 287
Msa0398500 MtrunA17_Chr8g0344191 42.458 358 193 7 22 375 198 546 2.24e-94 292
Msa0398500 MtrunA17_Chr3g0116681 41.061 358 198 7 8 364 157 502 1.51e-91 283
Msa0398500 MtrunA17_Chr2g0310391 45.426 317 167 3 51 366 183 494 7.23e-89 276
Msa0398500 MtrunA17_Chr6g0484841 40.385 364 198 6 8 365 154 504 1.15e-88 276
Msa0398500 MtrunA17_Chr6g0451781 43.059 353 191 6 23 371 215 561 1.06e-87 275
Msa0398500 MtrunA17_Chr2g0310381 44.795 317 169 3 51 366 183 494 4.25e-87 271
Msa0398500 MtrunA17_Chr4g0047661 41.111 360 191 8 8 359 165 511 1.73e-85 268
Msa0398500 MtrunA17_Chr4g0047691 41.341 358 187 7 8 359 169 509 3.87e-85 267
Msa0398500 MtrunA17_Chr4g0047641 41.176 357 192 7 8 359 167 510 6.05e-85 267
Msa0398500 MtrunA17_Chr8g0382901 41.226 359 199 5 8 366 609 955 1.11e-84 276
Msa0398500 MtrunA17_Chr8g0382901 39.718 355 187 5 8 362 145 472 1.85e-77 256
Msa0398500 MtrunA17_Chr4g0058191 38.611 360 204 7 8 364 142 487 1.24e-84 265
Msa0398500 MtrunA17_Chr7g0235551 37.057 367 218 6 8 368 151 510 1.45e-83 263
Msa0398500 MtrunA17_Chr5g0431641 37.883 359 207 4 8 365 157 500 1.56e-83 263
Msa0398500 MtrunA17_Chr4g0047631 40.223 358 191 7 8 359 166 506 3.59e-83 262
Msa0398500 MtrunA17_Chr6g0484811 39.237 367 203 7 8 367 154 507 6.05e-83 261
Msa0398500 MtrunA17_Chr4g0024771 38.440 359 205 4 8 365 157 500 8.74e-83 261
Msa0398500 MtrunA17_Chr7g0246221 39.496 357 205 4 8 361 151 499 2.01e-82 260
Msa0398500 MtrunA17_Chr8g0356001 39.560 364 193 6 8 362 158 503 2.04e-82 260
Msa0398500 MtrunA17_Chr8g0362481 36.364 363 218 9 8 366 83 436 2.32e-82 258
Msa0398500 MtrunA17_Chr3g0101671 36.856 369 202 8 8 362 156 507 2.36e-82 260
Msa0398500 MtrunA17_Chr1g0205361 38.781 361 202 8 8 364 151 496 2.63e-82 259
Msa0398500 MtrunA17_Chr4g0057001 40.947 359 197 6 10 366 169 514 4.03e-82 259
Msa0398500 MtrunA17_Chr5g0431671 36.490 359 212 4 8 365 158 501 7.81e-82 258
Msa0398500 MtrunA17_Chr7g0246121 46.535 303 155 3 60 361 200 496 1.24e-81 258
Msa0398500 MtrunA17_Chr7g0254641 36.533 375 223 7 6 371 152 520 1.57e-81 258
Msa0398500 MtrunA17_Chr5g0405001 40.541 370 196 8 8 367 160 515 1.62e-81 258
Msa0398500 MtrunA17_Chr3g0101721 36.927 371 205 8 8 371 155 503 1.70e-81 258
Msa0398500 MtrunA17_Chr4g0039901 37.006 354 209 4 9 360 153 494 2.54e-81 257
Msa0398500 MtrunA17_Chr4g0058231 38.292 363 198 7 8 359 145 492 3.49e-81 256
Msa0398500 MtrunA17_Chr4g0035921 38.889 378 196 7 8 366 153 514 5.59e-81 256
Msa0398500 MtrunA17_Chr7g0255531 39.295 369 208 6 8 371 145 502 5.99e-81 256
Msa0398500 MtrunA17_Chr3g0101741 37.326 359 200 7 8 362 83 420 6.28e-81 254
Msa0398500 MtrunA17_Chr1g0174471 36.066 366 214 7 9 366 168 521 9.22e-81 256
Msa0398500 MtrunA17_Chr4g0058261 38.798 366 203 8 6 362 177 530 1.37e-80 256
Msa0398500 MtrunA17_Chr3g0101691 36.188 362 209 7 8 362 156 502 1.82e-80 255
Msa0398500 MtrunA17_Chr1g0160851 36.695 357 207 8 10 362 153 494 3.78e-80 254
Msa0398500 MtrunA17_Chr3g0101731 36.364 374 202 8 8 371 154 501 4.35e-80 254
Msa0398500 MtrunA17_Chr3g0101651 35.389 373 213 7 8 373 156 507 9.77e-80 253
Msa0398500 MtrunA17_Chr5g0431591 37.048 332 194 4 38 367 2 320 1.02e-79 247
Msa0398500 MtrunA17_Chr3g0101631 37.500 368 192 10 9 362 155 498 1.40e-79 252
Msa0398500 MtrunA17_Chr8g0372251 40.431 371 196 8 8 367 151 507 1.44e-79 253
Msa0398500 MtrunA17_Chr3g0084921 36.957 368 213 6 9 366 153 511 3.75e-79 252
Msa0398500 MtrunA17_Chr1g0160861 38.529 340 192 7 26 362 10 335 4.18e-79 246
Msa0398500 MtrunA17_Chr1g0174461 37.808 365 209 8 8 366 153 505 4.81e-79 251
Msa0398500 MtrunA17_Chr5g0445461 36.416 346 204 4 8 352 157 487 5.20e-79 251
Msa0398500 MtrunA17_Chr6g0472311 37.802 373 206 8 8 366 158 518 5.41e-79 251
Msa0398500 MtrunA17_Chr3g0101711 37.017 362 206 6 8 362 155 501 5.44e-79 251
Msa0398500 MtrunA17_Chr4g0056951 41.108 343 188 5 27 366 178 509 6.31e-79 251
Msa0398500 MtrunA17_Chr5g0445441 36.915 363 209 6 8 367 198 543 8.90e-79 251
Msa0398500 MtrunA17_Chr1g0174481 37.293 362 212 7 8 366 151 500 1.31e-78 250
Msa0398500 MtrunA17_Chr1g0174451 36.612 366 212 9 8 366 154 506 1.67e-78 250
Msa0398500 MtrunA17_Chr4g0030711 36.815 383 219 6 9 375 155 530 2.49e-78 250
Msa0398500 MtrunA17_Chr3g0101601 36.413 368 199 8 8 362 154 499 2.90e-78 249
Msa0398500 MtrunA17_Chr4g0030701 38.441 372 207 7 10 366 154 518 4.09e-78 249
Msa0398500 MtrunA17_Chr5g0445531 36.798 356 208 5 8 362 157 496 4.63e-78 248
Msa0398500 MtrunA17_Chr3g0101661 36.464 362 207 9 8 362 156 501 6.24e-78 249
Msa0398500 MtrunA17_Chr1g0164211 37.255 357 209 4 8 362 148 491 7.67e-78 248
Msa0398500 MtrunA17_Chr3g0101811 35.492 386 200 9 8 364 155 520 8.53e-78 248
Msa0398500 MtrunA17_Chr3g0082701 39.058 361 206 6 21 373 177 531 9.48e-78 248
Msa0398500 MtrunA17_Chr6g0451751 38.827 358 203 6 20 371 181 528 1.06e-77 248
Msa0398500 MtrunA17_Chr5g0403351 36.729 373 204 9 8 371 154 503 1.13e-77 248
Msa0398500 MtrunA17_Chr7g0246151 39.106 358 204 5 8 361 151 498 2.02e-77 247
Msa0398500 MtrunA17_Chr3g0101621 40.717 307 161 5 66 362 198 493 2.09e-77 246
Msa0398500 MtrunA17_Chr4g0008101 38.674 362 208 5 20 375 179 532 2.15e-77 248
Msa0398500 MtrunA17_Chr4g0053621 38.643 339 190 5 28 365 173 494 2.25e-77 247
Msa0398500 MtrunA17_Chr8g0390881 38.068 352 202 6 23 366 162 505 4.01e-77 246
Msa0398500 MtrunA17_Chr7g0265611 40.575 313 171 5 59 363 210 515 6.48e-77 246
Msa0398500 MtrunA17_Chr8g0362701 35.165 364 221 9 8 366 152 505 6.67e-77 246
Msa0398500 MtrunA17_Chr3g0101581 36.267 375 214 8 4 373 150 504 7.75e-77 245
Msa0398500 MtrunA17_Chr8g0361471 37.243 341 188 7 8 339 152 475 9.94e-77 245
Msa0398500 MtrunA17_Chr7g0258221 36.712 365 215 5 8 366 151 505 1.22e-76 245
Msa0398500 MtrunA17_Chr1g0162811 37.500 360 203 7 8 362 155 497 1.30e-76 245
Msa0398500 MtrunA17_Chr5g0445381 36.769 359 211 4 8 365 188 531 1.39e-76 246
Msa0398500 MtrunA17_Chr3g0101701 34.853 373 215 7 8 373 156 507 1.69e-76 244
Msa0398500 MtrunA17_Chr6g0451691 38.292 363 208 5 17 371 178 532 1.70e-76 245
Msa0398500 MtrunA17_Chr7g0246181 41.011 356 200 4 8 361 151 498 5.24e-76 243
Msa0398500 MtrunA17_Chr1g0207841 37.105 380 212 6 9 371 156 525 1.31e-75 243
Msa0398500 MtrunA17_Chr5g0395331 37.260 365 213 8 3 362 149 502 2.12e-75 242
Msa0398500 MtrunA17_Chr5g0445451 35.457 361 217 4 8 367 157 502 2.13e-75 241
Msa0398500 MtrunA17_Chr1g0200961 39.227 362 201 7 8 362 145 494 2.67e-75 241
Msa0398500 MtrunA17_Chr5g0401681 37.778 360 204 6 8 365 149 490 3.20e-75 241
Msa0398500 MtrunA17_Chr5g0430031 36.438 365 213 5 8 366 154 505 7.92e-75 240
Msa0398500 MtrunA17_Chr3g0116741 37.057 367 212 7 1 362 161 513 9.34e-75 240
Msa0398500 MtrunA17_Chr5g0395321 36.216 370 209 7 10 375 161 507 1.01e-74 241
Msa0398500 MtrunA17_Chr5g0446161 35.833 360 209 8 8 364 159 499 2.25e-74 239
Msa0398500 MtrunA17_Chr5g0430131 38.187 364 207 5 8 366 154 504 2.57e-74 239
Msa0398500 MtrunA17_Chr6g0466331 36.471 340 190 7 8 338 152 474 3.74e-74 238
Msa0398500 MtrunA17_Chr6g0465511 36.471 340 190 7 8 338 152 474 4.43e-74 238
Msa0398500 MtrunA17_Chr5g0446151 36.389 360 208 7 8 364 159 500 4.52e-74 238
Msa0398500 MtrunA17_Chr4g0058281 37.778 360 208 6 8 362 163 511 5.81e-74 238
Msa0398500 MtrunA17_Chr5g0431511 34.903 361 221 5 10 366 153 503 9.41e-74 238
Msa0398500 MtrunA17_Chr4g0058201 35.457 361 216 7 8 364 145 492 1.36e-73 237
Msa0398500 MtrunA17_Chr4g0020041 35.180 361 212 6 8 362 155 499 1.56e-73 237
Msa0398500 MtrunA17_Chr5g0445421 35.556 360 197 4 8 367 231 555 1.81e-73 238
Msa0398500 MtrunA17_Chr4g0011961 36.313 358 211 6 10 363 149 493 2.35e-73 236
Msa0398500 MtrunA17_Chr3g0101571 34.688 369 215 8 4 362 149 501 3.33e-73 236
Msa0398500 MtrunA17_Chr8g0355961 38.462 364 197 6 8 362 158 503 3.71e-73 236
Msa0398500 MtrunA17_Chr4g0011921 37.360 356 211 5 10 363 149 494 7.23e-73 235
Msa0398500 MtrunA17_Chr3g0101611 35.040 371 213 8 8 366 155 509 1.48e-72 234
Msa0398500 MtrunA17_Chr1g0167321 38.674 362 199 7 8 362 152 497 1.57e-72 234
Msa0398500 MtrunA17_Chr4g0052881 36.842 361 207 7 8 365 149 491 1.90e-72 234
Msa0398500 MtrunA17_Chr6g0451741 37.234 376 216 7 8 371 183 550 2.13e-72 235
Msa0398500 MtrunA17_Chr2g0314731 39.297 313 161 8 58 361 192 484 3.52e-72 233
Msa0398500 MtrunA17_Chr5g0395381 41.522 289 155 5 78 362 192 470 4.47e-72 232
Msa0398500 MtrunA17_Chr7g0218611 36.888 347 205 6 8 351 151 486 4.72e-72 233
Msa0398500 MtrunA17_Chr5g0419691 37.861 346 197 6 10 350 149 481 9.31e-72 232
Msa0398500 MtrunA17_Chr1g0205371 38.268 358 204 7 8 362 152 495 1.03e-71 232
Msa0398500 MtrunA17_Chr6g0466901 38.571 350 204 6 27 371 178 521 1.47e-71 232
Msa0398500 MtrunA17_Chr5g0403331 37.015 335 192 6 45 371 181 504 2.28e-71 231
Msa0398500 MtrunA17_Chr5g0430101 37.088 364 210 6 8 366 153 502 2.32e-71 231
Msa0398500 MtrunA17_Chr4g0046631 40.361 332 185 7 40 371 205 523 2.52e-71 232
Msa0398500 MtrunA17_Chr5g0403321 34.574 376 213 8 8 372 154 507 3.15e-71 231
Msa0398500 MtrunA17_Chr2g0314721 40.625 288 151 6 58 336 203 479 3.19e-71 231
Msa0398500 MtrunA17_Chr7g0246131 38.719 359 210 3 8 363 151 502 5.28e-71 230
Msa0398500 MtrunA17_Chr1g0213671 37.709 358 212 5 9 364 158 506 5.49e-71 231
Msa0398500 MtrunA17_Chr5g0430091 40.909 308 172 5 65 366 202 505 7.94e-71 230
Msa0398500 MtrunA17_Chr3g0101801 35.501 369 210 7 8 364 160 512 1.65e-70 229
Msa0398500 MtrunA17_Chr5g0430081 40.312 320 175 6 55 366 192 503 2.15e-70 229
Msa0398500 MtrunA17_Chr8g0357421 37.222 360 205 6 8 362 155 498 3.10e-70 228
Msa0398500 MtrunA17_Chr1g0162801 37.569 362 203 8 8 362 155 500 3.85e-70 228
Msa0398500 MtrunA17_Chr5g0430071 39.159 309 176 5 65 366 55 358 7.02e-70 223
Msa0398500 MtrunA17_Chr7g0258211 36.286 350 207 7 18 362 168 506 8.33e-70 227
Msa0398500 MtrunA17_Chr1g0197881 36.207 348 198 9 14 358 156 482 8.93e-70 226
Msa0398500 MtrunA17_Chr1g0197851 36.207 348 198 9 14 358 157 483 9.02e-70 226
Msa0398500 MtrunA17_Chr1g0197891 35.593 354 204 9 8 358 151 483 9.12e-70 226
Msa0398500 MtrunA17_Chr3g0101831 36.565 361 207 6 8 362 155 499 9.87e-70 227
Msa0398500 MtrunA17_Chr6g0451641 36.517 356 215 7 21 373 176 523 1.06e-69 227
Msa0398500 MtrunA17_Chr6g0463801 35.674 356 212 6 8 362 155 494 1.22e-69 227
Msa0398500 MtrunA17_Chr5g0431501 35.262 363 221 5 8 366 151 503 1.76e-69 226
Msa0398500 MtrunA17_Chr5g0431461 35.262 363 221 5 8 366 151 503 1.76e-69 226
Msa0398500 MtrunA17_Chr2g0304871 39.420 345 199 7 28 370 182 518 2.19e-69 226
Msa0398500 MtrunA17_Chr4g0052861 35.262 363 209 7 8 365 149 490 3.31e-69 225
Msa0398500 MtrunA17_Chr1g0174441 33.333 366 226 7 8 366 173 527 5.57e-69 226
Msa0398500 MtrunA17_Chr4g0076161 33.889 360 221 7 8 364 157 502 9.57e-69 224
Msa0398500 MtrunA17_Chr1g0156101 32.880 368 232 6 8 365 150 512 2.14e-68 224
Msa0398500 MtrunA17_Chr5g0401691 34.262 359 216 7 8 365 168 507 2.19e-68 224
Msa0398500 MtrunA17_Chr3g0101821 38.462 325 184 5 45 362 183 498 2.56e-68 223
Msa0398500 MtrunA17_Chr7g0224551 33.777 376 216 8 9 366 149 509 5.56e-68 223
Msa0398500 MtrunA17_Chr3g0101761 38.700 323 182 5 45 360 183 496 6.62e-68 222
Msa0398500 MtrunA17_Chr1g0197871 35.530 349 199 10 14 358 157 483 8.18e-68 221
Msa0398500 MtrunA17_Chr4g0011871 36.994 346 201 6 10 350 149 482 9.68e-68 221
Msa0398500 MtrunA17_Chr4g0039391 36.810 326 193 4 40 365 187 499 1.21e-67 221
Msa0398500 MtrunA17_Chr3g0101751 39.319 323 180 6 45 360 190 503 2.07e-67 221
Msa0398500 MtrunA17_Chr4g0011981 36.723 354 206 6 10 358 149 489 3.96e-67 220
Msa0398500 MtrunA17_Chr1g0176831 37.621 311 169 7 58 361 222 514 5.62e-67 220
Msa0398500 MtrunA17_Chr8g0339311 33.602 372 232 6 10 373 165 529 5.77e-67 220
Msa0398500 MtrunA17_Chr4g0052851 40.594 303 157 6 66 365 200 482 7.12e-67 219
Msa0398500 MtrunA17_Chr4g0011901 35.112 356 213 6 10 360 149 491 9.96e-67 219
Msa0398500 MtrunA17_Chr5g0446101 35.976 328 192 5 38 364 2 312 1.10e-66 213
Msa0398500 MtrunA17_Chr6g0466941 37.394 353 209 5 27 373 178 524 2.32e-66 219
Msa0398500 MtrunA17_Chr8g0339331 33.875 369 234 7 7 371 157 519 4.31e-66 218
Msa0398500 MtrunA17_Chr1g0200951 35.714 364 214 8 10 367 181 530 4.77e-66 218
Msa0398500 MtrunA17_Chr7g0224561 33.777 376 216 8 9 366 149 509 5.97e-66 218
Msa0398500 MtrunA17_Chr8g0357431 36.986 365 205 6 8 362 155 504 1.95e-65 216
Msa0398500 MtrunA17_Chr7g0218601 34.375 352 205 8 8 351 152 485 2.53e-65 215
Msa0398500 MtrunA17_Chr2g0310351 48.039 204 102 1 162 365 1 200 4.91e-65 205
Msa0398500 MtrunA17_Chr1g0174431 45.024 211 111 3 162 369 1 209 9.55e-65 205
Msa0398500 MtrunA17_Chr5g0406651 36.919 344 205 5 10 351 150 483 1.54e-64 213
Msa0398500 MtrunA17_Chr6g0451811 48.131 214 106 3 158 371 1 209 5.03e-64 203
Msa0398500 MtrunA17_Chr4g0011881 36.499 337 203 4 10 345 150 476 5.60e-64 212
Msa0398500 MtrunA17_Chr2g0296651 33.518 361 219 6 8 365 148 490 7.80e-64 211
Msa0398500 MtrunA17_Chr4g0058211 46.602 206 104 2 159 364 16 215 1.01e-63 202
Msa0398500 MtrunA17_Chr6g0458561 33.062 369 234 8 7 371 173 532 1.19e-63 212
Msa0398500 MtrunA17_Chr2g0296661 37.110 353 197 7 11 358 156 488 1.84e-63 211
Msa0398500 MtrunA17_Chr4g0017411 39.934 303 159 6 66 365 197 479 4.85e-63 209
Msa0398500 MtrunA17_Chr5g0419451 35.695 367 205 9 5 365 178 519 8.42e-63 209
Msa0398500 MtrunA17_Chr4g0046351 34.675 323 188 7 62 365 194 512 4.00e-62 207
Msa0398500 MtrunA17_Chr8g0351801 31.267 371 232 5 8 362 152 515 9.00e-61 204
Msa0398500 MtrunA17_Chr4g0046321 29.947 374 228 7 10 365 155 512 2.25e-60 203
Msa0398500 MtrunA17_Chr8g0346261 34.444 360 220 7 8 365 200 545 3.18e-60 203
Msa0398500 MtrunA17_Chr4g0046331 34.259 324 190 7 62 365 194 514 4.99e-60 202
Msa0398500 MtrunA17_Chr8g0370651 33.604 369 231 7 9 371 168 528 8.13e-60 201
Msa0398500 MtrunA17_Chr1g0156081 33.424 368 230 6 8 365 174 536 8.97e-60 202
Msa0398500 MtrunA17_Chr8g0377341 41.667 264 143 4 69 331 242 495 1.13e-59 201
Msa0398500 MtrunA17_Chr6g0463791 31.686 344 219 6 22 362 166 496 3.73e-59 199
Msa0398500 MtrunA17_Chr2g0280261 34.615 364 219 6 8 370 152 497 4.33e-59 199
Msa0398500 MtrunA17_Chr4g0046681 43.182 220 117 3 156 372 22 236 1.57e-58 190
Msa0398500 MtrunA17_Chr8g0370641 32.791 369 234 7 9 371 164 524 3.59e-58 197
Msa0398500 MtrunA17_Chr3g0101591 44.949 198 105 1 165 362 42 235 5.26e-58 188
Msa0398500 MtrunA17_Chr8g0390871 40.969 227 128 3 141 366 6 227 2.23e-57 187
Msa0398500 MtrunA17_Chr6g0451771 42.593 216 119 2 158 373 18 228 1.67e-56 184
Msa0398500 MtrunA17_Chr6g0451681 42.727 220 121 3 152 371 267 481 2.28e-55 189
Msa0398500 MtrunA17_Chr4g0011851 40.796 201 115 1 150 350 4 200 3.13e-54 178
Msa0398500 MtrunA17_Chr4g0011941 41.791 201 113 1 162 362 1 197 1.28e-53 176
Msa0398500 MtrunA17_Chr2g0314781 43.478 184 91 3 178 361 1 171 1.42e-53 175
Msa0398500 MtrunA17_Chr4g0046661 43.636 220 119 2 152 371 15 229 8.85e-53 175
Msa0398500 MtrunA17_Chr5g0445371 33.700 273 146 3 101 373 1 238 3.65e-52 174
Msa0398500 MtrunA17_Chr5g0402981 45.771 201 103 3 172 371 2 197 1.27e-51 171
Msa0398500 MtrunA17_Chr5g0430111 35.842 279 164 5 9 281 155 424 5.70e-51 176
Msa0398500 MtrunA17_Chr1g0156061 37.594 266 157 4 91 352 193 453 7.81e-51 176
Msa0398500 MtrunA17_Chr6g0463621 37.981 208 122 3 162 366 1 204 9.13e-51 169
Msa0398500 MtrunA17_Chr3g0107541 31.063 367 243 6 9 371 171 531 4.66e-50 176
Msa0398500 MtrunA17_Chr3g0086671 75.000 112 24 1 46 157 1 108 6.09e-50 164
Msa0398500 MtrunA17_Chr6g0477081 37.805 246 137 3 28 273 13 242 6.61e-48 162
Msa0398500 MtrunA17_Chr5g0432751 33.154 371 230 10 1 363 144 504 1.06e-47 169
Msa0398500 MtrunA17_Chr5g0445761 47.514 181 91 1 162 342 1 177 1.88e-47 160
Msa0398500 MtrunA17_Chr5g0445351 44.242 165 88 1 190 354 52 212 1.46e-45 155
Msa0398500 MtrunA17_Chr4g0046701 44.311 167 88 2 205 371 2 163 1.73e-45 154
Msa0398500 MtrunA17_Chr3g0107611 30.579 363 241 5 15 371 180 537 4.88e-45 162
Msa0398500 MtrunA17_Chr5g0423621 40.541 185 104 2 178 362 1 179 1.25e-44 152
Msa0398500 MtrunA17_Chr5g0409051 28.338 367 233 8 16 370 161 509 8.05e-43 155
Msa0398500 MtrunA17_Chr8g0364651 29.781 366 226 8 14 366 152 499 2.76e-42 154
Msa0398500 MtrunA17_Chr1g0198191 35.294 255 156 6 82 331 233 483 3.58e-41 151
Msa0398500 MtrunA17_Chr1g0210091 33.684 285 184 4 80 362 254 535 5.55e-41 151
Msa0398500 MtrunA17_Chr3g0101541 48.551 138 67 2 212 349 3 136 6.61e-40 138
Msa0398500 MtrunA17_Chr5g0430041 41.358 162 90 2 188 348 1 158 4.15e-39 137
Msa0398500 MtrunA17_Chr5g0430151 41.808 177 98 2 191 366 4 176 4.92e-39 137
Msa0398500 MtrunA17_Chr2g0334021 31.894 301 186 6 66 365 216 498 6.39e-39 145
Msa0398500 MtrunA17_Chr4g0074581 33.453 278 168 7 65 331 240 511 1.25e-38 145
Msa0398500 MtrunA17_Chr5g0444981 42.703 185 96 4 174 358 23 197 4.29e-38 136
Msa0398500 MtrunA17_Chr2g0280011 36.538 208 120 4 165 366 11 212 2.44e-37 134
Msa0398500 MtrunA17_Chr2g0280081 29.363 361 234 7 14 366 658 1005 7.52e-37 142
Msa0398500 MtrunA17_Chr2g0280081 31.250 304 191 6 60 353 196 491 1.37e-34 135
Msa0398500 MtrunA17_Chr2g0280061 36.538 208 120 4 165 366 11 212 1.75e-36 132
Msa0398500 MtrunA17_Chr8g0387101 31.111 315 204 6 60 366 198 507 1.75e-36 138
Msa0398500 MtrunA17_Chr3g0107551 34.762 210 133 3 162 371 5 210 3.53e-36 130
Msa0398500 MtrunA17_Chr5g0445361 43.284 134 67 2 234 362 10 139 6.19e-36 128
Msa0398500 MtrunA17_Chr5g0413911 34.862 218 132 4 148 361 313 524 7.00e-36 137
Msa0398500 MtrunA17_Chr4g0028321 43.662 142 74 2 228 366 20 158 1.73e-35 127
Msa0398500 MtrunA17_Chr2g0280121 28.767 365 233 8 14 366 161 510 4.43e-35 134
Msa0398500 MtrunA17_Chr2g0280071 31.013 316 200 7 60 365 229 536 3.02e-34 134
Msa0398500 MtrunA17_Chr8g0351401 29.598 348 207 8 28 363 189 510 1.33e-33 130
Msa0398500 MtrunA17_Chr3g0105761 32.701 211 132 4 164 372 2 204 2.32e-32 120
Msa0398500 MtrunA17_Chr2g0280041 28.650 363 234 7 14 366 189 536 6.44e-32 126
Msa0398500 MtrunA17_Chr4g0076171 35.079 191 101 3 178 366 1 170 1.15e-30 115
Msa0398500 MtrunA17_Chr3g0117301 39.669 121 69 1 213 333 1 117 3.07e-30 112
Msa0398500 MtrunA17_Chr0c19g0493771 25.441 397 235 12 7 375 299 662 3.39e-29 119
Msa0398500 MtrunA17_Chr8g0364631 32.959 267 164 6 103 358 237 499 6.82e-29 117
Msa0398500 MtrunA17_Chr4g0030761 36.478 159 78 4 213 365 1 142 6.18e-27 104
Msa0398500 MtrunA17_Chr3g0116731 38.514 148 72 3 215 362 3 131 7.53e-27 103
Msa0398500 MtrunA17_Chr8g0372591 33.333 144 96 0 160 303 1 144 1.20e-26 103
Msa0398500 MtrunA17_Chr8g0381541 30.738 244 144 8 100 334 235 462 3.93e-26 109
Msa0398500 MtrunA17_Chr3g0141801 31.148 244 146 8 95 333 231 457 8.86e-26 108
Msa0398500 MtrunA17_Chr8g0381571 30.380 237 142 7 100 329 235 455 1.10e-25 107
Msa0398500 MtrunA17_Chr5g0396521 27.301 326 201 8 42 334 221 543 1.48e-24 105
Msa0398500 MtrunA17_Chr1g0203151 28.679 265 172 7 102 362 259 510 2.07e-24 104
Msa0398500 MtrunA17_Chr3g0116721 34.375 192 103 7 8 188 11 190 2.90e-24 98.6
Msa0398500 MtrunA17_Chr1g0203141 29.434 265 170 7 102 362 263 514 3.42e-24 103
Msa0398500 MtrunA17_Chr4g0038271 24.906 265 172 6 86 330 273 530 4.03e-24 103
Msa0398500 MtrunA17_Chr1g0176851 30.233 215 130 6 9 216 33 234 7.94e-24 98.6
Msa0398500 MtrunA17_Chr2g0293411 30.769 247 148 8 95 335 232 461 8.58e-24 102
Msa0398500 MtrunA17_Chr3g0135841 27.820 266 176 6 74 329 244 503 1.16e-23 102
Msa0398500 MtrunA17_Chr6g0479681 28.369 282 167 9 102 362 261 528 3.45e-23 100
Msa0398500 MtrunA17_Chr8g0351421 24.332 374 254 10 7 365 151 510 1.23e-22 99.4
Msa0398500 MtrunA17_Chr1g0204271 24.011 354 226 10 7 337 151 484 1.27e-22 99.4
Msa0398500 MtrunA17_Chr8g0351441 25.199 377 247 12 7 365 150 509 1.49e-22 99.0
Msa0398500 MtrunA17_Chr1g0164321 23.954 263 173 6 88 330 262 517 5.66e-22 97.4
Msa0398500 MtrunA17_Chr3g0086701 67.797 59 19 0 317 375 1 59 7.11e-22 87.8
Msa0398500 MtrunA17_Chr8g0351461 24.194 372 255 10 7 363 150 509 1.05e-21 96.7
Msa0398500 MtrunA17_Chr1g0151221 28.571 252 159 6 97 337 272 513 1.49e-21 96.3
Msa0398500 MtrunA17_Chr7g0248991 27.797 295 180 9 7 286 81 357 1.81e-21 94.7
Msa0398500 MtrunA17_Chr6g0455461 29.876 241 146 7 95 332 218 438 2.90e-21 95.1
Msa0398500 MtrunA17_Chr3g0078411 29.461 241 147 7 95 332 218 438 4.35e-21 94.4
Msa0398500 MtrunA17_Chr8g0372331 37.600 125 74 3 247 371 9 129 7.82e-21 87.4
Msa0398500 MtrunA17_Chr8g0372711 29.717 212 134 4 127 335 261 460 8.67e-21 93.6
Msa0398500 MtrunA17_Chr8g0348751 25.882 255 162 7 90 327 234 478 1.35e-20 93.2
Msa0398500 MtrunA17_Chr8g0334941 30.901 233 147 6 106 333 78 301 5.34e-20 89.7
Msa0398500 MtrunA17_Chr8g0387001 25.714 245 157 6 96 326 239 472 1.10e-19 90.5
Msa0398500 MtrunA17_Chr2g0313821 26.087 299 203 10 42 333 202 489 2.66e-19 89.4
Msa0398500 MtrunA17_Chr4g0056981 54.167 72 33 0 188 259 1 72 3.50e-19 80.9
Msa0398500 MtrunA17_Chr8g0334891 30.041 243 156 6 106 343 233 466 6.27e-19 88.2
Msa0398500 MtrunA17_Chr6g0472221 29.851 268 167 10 102 362 272 525 6.28e-19 88.2
Msa0398500 MtrunA17_Chr8g0351391 23.615 343 234 9 7 335 157 485 8.29e-19 87.8
Msa0398500 MtrunA17_Chr8g0339861 29.218 243 147 8 100 334 234 459 1.30e-18 87.0
Msa0398500 MtrunA17_Chr1g0163421 25.391 256 177 7 90 336 266 516 1.45e-18 87.0
Msa0398500 MtrunA17_Chr1g0193811 24.340 341 235 10 25 362 195 515 1.76e-18 87.0
Msa0398500 MtrunA17_Chr6g0449341 25.681 257 167 7 91 329 282 532 2.34e-18 86.7
Msa0398500 MtrunA17_Chr1g0163451 25.887 282 186 10 71 336 226 500 2.81e-18 86.3
Msa0398500 MtrunA17_Chr2g0293421 27.711 249 154 9 100 340 236 466 4.34e-18 85.5
Msa0398500 MtrunA17_Chr7g0219961 28.571 245 144 7 95 332 217 437 5.87e-18 85.1
Msa0398500 MtrunA17_Chr2g0313751 26.557 305 197 12 38 333 230 516 6.66e-18 85.1
Msa0398500 MtrunA17_Chr5g0429651 26.693 251 149 8 96 327 242 476 7.03e-18 85.1
Msa0398500 MtrunA17_Chr3g0089361 29.204 226 137 8 116 335 245 453 8.92e-18 84.7
Msa0398500 MtrunA17_Chr3g0089351 28.436 211 128 8 131 335 178 371 1.58e-17 83.6
Msa0398500 MtrunA17_Chr3g0128461 27.311 238 161 7 98 333 270 497 2.24e-17 83.6
Msa0398500 MtrunA17_Chr6g0449351 26.335 281 172 10 90 344 192 463 2.44e-17 83.2
Msa0398500 MtrunA17_Chr1g0179811 28.384 229 138 7 115 333 300 512 3.86e-17 82.8
Msa0398500 MtrunA17_Chr8g0351311 28.936 235 145 7 112 335 263 486 4.30e-17 82.8
Msa0398500 MtrunA17_Chr2g0313771 23.684 342 222 13 7 333 179 496 4.31e-17 82.8
Msa0398500 MtrunA17_Chr2g0288661 23.030 330 229 11 11 333 180 491 5.19e-17 82.4
Msa0398500 MtrunA17_Chr2g0313801 28.099 242 159 8 100 333 255 489 6.43e-17 82.0
Msa0398500 MtrunA17_Chr5g0403451 26.908 249 139 6 114 330 14 251 7.91e-17 80.1
Msa0398500 MtrunA17_Chr5g0408181 25.926 270 170 8 100 363 218 463 8.43e-17 81.6
Msa0398500 MtrunA17_Chr7g0214931 26.064 188 124 5 88 264 252 435 8.76e-17 81.6
Msa0398500 MtrunA17_Chr8g0364081 25.648 347 216 16 9 333 188 514 9.95e-17 81.6
Msa0398500 MtrunA17_Chr2g0313791 28.295 258 167 10 85 333 236 484 1.16e-16 81.3
Msa0398500 MtrunA17_Chr5g0403931 30.317 221 130 6 148 363 270 471 1.28e-16 81.3
Msa0398500 MtrunA17_Chr3g0104351 26.522 230 150 7 114 327 258 484 1.31e-16 81.3
Msa0398500 MtrunA17_Chr2g0307291 26.154 325 213 12 17 333 186 491 1.78e-16 80.9
Msa0398500 MtrunA17_Chr2g0313781 26.347 334 213 15 11 333 190 501 1.91e-16 80.9
Msa0398500 MtrunA17_Chr1g0154731 23.279 305 211 7 28 331 192 474 3.22e-16 80.1
Msa0398500 MtrunA17_Chr6g0449381 24.932 369 231 13 7 340 144 501 3.48e-16 79.7
Msa0398500 MtrunA17_Chr6g0449331 25.670 261 162 9 91 329 234 484 3.66e-16 79.7
Msa0398500 MtrunA17_Chr2g0313831 26.230 305 198 12 38 333 203 489 3.91e-16 79.7
Msa0398500 MtrunA17_Chr6g0449361 23.735 257 177 8 90 336 232 479 5.33e-16 79.3
Msa0398500 MtrunA17_Chr8g0354531 29.167 240 157 8 101 333 385 618 1.39e-15 78.2
Msa0398500 MtrunA17_Chr5g0400421 29.208 202 120 8 141 334 277 463 1.90e-15 77.8
Msa0398500 MtrunA17_Chr5g0400411 27.876 226 138 8 118 334 253 462 2.19e-15 77.4
Msa0398500 MtrunA17_Chr4g0004601 25.743 303 200 13 41 336 223 507 2.40e-15 77.4
Msa0398500 MtrunA17_Chr2g0307301 26.059 307 204 10 34 333 201 491 2.53e-15 77.4
Msa0398500 MtrunA17_Chr4g0063221 29.714 175 115 5 161 333 324 492 3.66e-15 77.0
Msa0398500 MtrunA17_Chr8g0354571 25.926 243 167 6 98 333 261 497 3.97e-15 76.6
Msa0398500 MtrunA17_Chr5g0397971 26.104 249 160 6 94 338 222 450 4.84e-15 76.3
Msa0398500 MtrunA17_Chr8g0371761 31.081 148 88 3 181 316 1 146 8.43e-15 71.2
Msa0398500 MtrunA17_Chr7g0215181 28.049 246 148 9 100 335 258 484 1.01e-14 75.5
Msa0398500 MtrunA17_Chr5g0443401 25.912 274 173 8 68 333 200 451 1.20e-14 75.1
Msa0398500 MtrunA17_Chr3g0113321 24.188 277 190 7 58 331 182 441 1.49e-14 74.7
Msa0398500 MtrunA17_Chr1g0164371 28.340 247 157 8 92 333 219 450 1.97e-14 74.3
Msa0398500 MtrunA17_Chr6g0457421 27.572 243 148 8 100 333 257 480 2.06e-14 74.3
Msa0398500 MtrunA17_Chr1g0204241 27.957 186 117 4 154 333 95 269 3.39e-14 72.4
Msa0398500 MtrunA17_Chr2g0313761 24.679 312 206 11 34 335 194 486 4.99e-14 73.2
Msa0398500 MtrunA17_Chr8g0354511 27.160 243 164 8 98 333 261 497 5.04e-14 73.2
Msa0398500 MtrunA17_Chr4g0030741 25.824 182 115 3 9 184 181 348 5.75e-14 72.4
Msa0398500 MtrunA17_Chr1g0174421 30.128 156 100 3 8 160 165 314 8.58e-14 71.6
Msa0398500 MtrunA17_Chr1g0163461 25.357 280 186 11 73 336 223 495 1.25e-13 72.0
Msa0398500 MtrunA17_Chr2g0310361 32.593 135 84 3 27 160 10 138 1.27e-13 67.8
Msa0398500 MtrunA17_Chr1g0164351 28.125 160 96 4 88 232 262 417 1.49e-13 71.6
Msa0398500 MtrunA17_Chr4g0026941 27.426 237 159 5 96 330 283 508 1.79e-13 71.6
Msa0398500 MtrunA17_Chr4g0044841 27.727 220 141 6 130 345 251 456 2.01e-13 71.2
Msa0398500 MtrunA17_Chr4g0011861 30.128 156 96 5 10 160 149 296 4.63e-13 69.3
Msa0398500 MtrunA17_Chr1g0163281 24.096 249 173 8 90 330 249 489 4.77e-13 70.5
Msa0398500 MtrunA17_Chr4g0044851 27.586 232 148 6 106 333 229 444 5.03e-13 70.1
Msa0398500 MtrunA17_Chr1g0163501 25.681 257 170 8 90 336 230 475 5.73e-13 70.1
Msa0398500 MtrunA17_Chr1g0163351 23.958 288 183 11 68 336 211 481 1.44e-12 68.9
Msa0398500 MtrunA17_Chr1g0163211 24.601 313 194 11 46 336 185 477 2.04e-12 68.2
Msa0398500 MtrunA17_Chr1g0163511 25.490 204 136 5 140 336 301 495 4.26e-12 67.4
Msa0398500 MtrunA17_Chr3g0107511 25.957 235 152 8 102 329 224 443 5.58e-12 67.0
Msa0398500 MtrunA17_Chr4g0046691 31.579 133 84 3 16 147 163 289 7.67e-12 65.5
Msa0398500 MtrunA17_Chr8g0372411 25.523 239 157 8 103 334 231 455 9.27e-12 66.2
Msa0398500 MtrunA17_Chr6g0472171 30.380 158 87 8 214 362 14 157 2.35e-11 61.6
Msa0398500 MtrunA17_Chr4g0004481 24.898 245 167 8 90 327 226 460 4.12e-11 64.3
Msa0398500 MtrunA17_Chr7g0227281 24.400 250 171 7 87 326 220 461 5.86e-11 63.9
Msa0398500 MtrunA17_Chr5g0446131 25.352 213 147 8 127 333 281 487 9.36e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0398500 AT5G07990.1 62.192 365 131 4 8 371 150 508 4.54e-168 479
Msa0398500 AT1G33730.1 41.061 358 193 6 9 360 21 366 3.61e-87 268
Msa0398500 AT1G33730.2 41.061 358 193 6 9 360 21 366 3.61e-87 268
Msa0398500 AT3G61040.1 41.011 356 195 7 9 362 151 493 5.05e-87 272
Msa0398500 AT1G33720.4 41.111 360 194 6 9 362 25 372 6.60e-87 268
Msa0398500 AT1G33720.3 41.111 360 194 6 9 362 25 372 6.60e-87 268
Msa0398500 AT1G33720.5 41.111 360 194 6 9 362 25 372 6.60e-87 268
Msa0398500 AT1G33720.1 41.111 360 194 6 9 362 157 504 3.22e-85 268
Msa0398500 AT2G45550.1 40.278 360 197 6 9 362 157 504 2.17e-84 266
Msa0398500 AT2G45570.1 40.055 362 198 6 8 362 156 505 1.50e-82 261
Msa0398500 AT2G40890.1 39.024 369 209 6 8 371 144 501 2.36e-82 260
Msa0398500 AT1G33720.2 38.903 383 195 8 9 362 25 397 8.12e-82 256
Msa0398500 AT5G04330.1 39.189 370 202 9 9 367 149 506 4.05e-81 257
Msa0398500 AT2G45580.2 36.314 369 218 6 9 373 5 360 6.72e-81 252
Msa0398500 AT2G45580.1 36.314 369 218 6 9 373 159 514 5.72e-79 251
Msa0398500 AT2G45560.1 38.889 360 200 7 10 362 158 504 2.66e-78 250
Msa0398500 AT4G22710.1 38.482 369 211 8 8 373 171 526 5.59e-78 249
Msa0398500 AT4G22690.1 38.482 369 211 8 8 373 202 557 8.75e-78 249
Msa0398500 AT3G26310.1 38.567 363 203 7 9 365 148 496 8.87e-78 248
Msa0398500 AT1G66540.1 35.772 369 210 8 8 369 35 383 4.11e-77 243
Msa0398500 AT4G36220.1 37.467 379 201 8 8 367 156 517 2.72e-76 245
Msa0398500 AT1G66540.2 36.628 344 194 7 30 369 1 324 9.65e-76 238
Msa0398500 AT4G13310.1 36.389 360 210 8 8 362 149 494 1.02e-74 240
Msa0398500 AT4G31950.1 39.045 356 196 8 23 366 160 506 1.15e-74 240
Msa0398500 AT3G26300.1 37.190 363 214 6 9 368 149 500 4.21e-74 238
Msa0398500 AT4G12310.1 38.889 342 197 5 28 366 181 513 8.46e-74 238
Msa0398500 AT1G01280.1 34.239 368 231 4 9 372 150 510 1.05e-73 238
Msa0398500 AT3G52970.2 39.617 366 204 9 8 364 169 526 1.91e-73 238
Msa0398500 AT3G26330.1 35.013 377 218 7 2 366 137 498 2.27e-73 237
Msa0398500 AT1G13080.2 33.973 365 223 8 8 365 30 383 2.62e-73 233
Msa0398500 AT4G37340.1 35.833 360 209 8 8 365 150 489 2.86e-73 236
Msa0398500 AT4G12330.1 37.119 361 211 7 8 366 165 511 2.99e-73 237
Msa0398500 AT3G52970.1 39.726 365 201 10 9 364 158 512 9.37e-73 235
Msa0398500 AT1G74550.1 38.147 367 199 8 10 371 143 486 9.65e-73 234
Msa0398500 AT5G57260.1 37.396 361 210 7 8 362 147 497 1.60e-72 234
Msa0398500 AT3G26230.1 38.484 343 192 10 28 362 163 494 1.86e-72 234
Msa0398500 AT5G44620.1 37.330 367 216 6 8 371 163 518 1.91e-72 235
Msa0398500 AT4G12320.1 35.635 362 221 5 8 366 159 511 3.83e-72 234
Msa0398500 AT1G13080.1 33.973 365 223 8 8 365 148 501 4.13e-72 233
Msa0398500 AT4G12300.1 36.389 360 219 4 8 366 159 509 9.83e-72 233
Msa0398500 AT3G28740.1 37.088 364 206 9 8 369 159 501 1.42e-71 232
Msa0398500 AT3G26170.1 36.565 361 214 8 8 362 147 498 1.87e-71 232
Msa0398500 AT4G37370.1 35.511 352 204 7 8 358 150 479 2.14e-71 231
Msa0398500 AT5G06900.1 37.640 356 202 7 9 362 152 489 2.30e-71 231
Msa0398500 AT4G37320.1 35.933 359 208 7 8 365 151 488 8.14e-71 230
Msa0398500 AT4G37360.1 35.511 352 206 7 8 358 150 481 1.16e-70 229
Msa0398500 AT4G31940.1 36.932 352 201 6 27 366 176 518 1.35e-70 230
Msa0398500 AT5G25180.1 33.240 358 223 5 8 362 146 490 2.72e-70 228
Msa0398500 AT3G26180.1 36.565 361 214 9 8 362 147 498 4.95e-70 228
Msa0398500 AT3G26290.1 39.167 360 199 7 9 362 149 494 7.15e-70 228
Msa0398500 AT3G48310.1 33.144 353 215 7 8 358 149 482 9.67e-70 227
Msa0398500 AT3G26290.2 39.167 360 199 7 9 362 162 507 9.91e-70 228
Msa0398500 AT3G26280.1 34.146 369 218 9 8 366 149 502 1.01e-69 227
Msa0398500 AT3G26280.2 34.146 369 218 9 8 366 166 519 1.17e-69 228
Msa0398500 AT4G13290.1 35.838 346 199 7 19 362 163 487 1.35e-69 226
Msa0398500 AT2G30770.1 34.358 358 218 7 8 362 150 493 1.45e-69 227
Msa0398500 AT4G37310.1 35.777 341 205 5 28 365 171 500 2.92e-69 226
Msa0398500 AT3G25180.1 35.150 367 225 6 8 372 158 513 5.05e-69 226
Msa0398500 AT1G74540.1 37.673 361 199 7 3 358 140 479 5.75e-69 225
Msa0398500 AT4G37330.1 35.376 359 207 7 8 365 151 485 6.05e-69 225
Msa0398500 AT3G48280.1 32.687 361 223 7 8 366 147 489 2.13e-68 223
Msa0398500 AT5G67310.1 35.613 351 204 4 13 363 169 497 2.77e-68 224
Msa0398500 AT1G13110.1 34.066 364 222 7 8 361 149 504 4.39e-68 223
Msa0398500 AT4G31970.1 36.695 357 212 7 23 371 172 522 9.93e-68 223
Msa0398500 AT4G37430.1 33.791 364 218 9 8 365 146 492 1.07e-67 222
Msa0398500 AT3G26320.1 34.072 361 218 7 8 362 148 494 1.25e-67 222
Msa0398500 AT3G48300.1 34.358 358 208 9 8 362 146 479 1.72e-67 221
Msa0398500 AT3G48300.2 34.358 358 208 9 8 362 148 481 1.80e-67 221
Msa0398500 AT4G37410.1 35.616 365 215 9 3 365 143 489 4.18e-67 220
Msa0398500 AT3G48270.1 32.578 353 217 7 8 358 148 481 4.93e-67 220
Msa0398500 AT3G20090.1 33.875 369 231 7 9 375 24 381 1.18e-66 216
Msa0398500 AT3G26160.1 35.933 359 215 7 10 362 149 498 1.30e-66 219
Msa0398500 AT5G57220.1 36.490 359 204 9 8 364 148 484 1.70e-66 218
Msa0398500 AT3G26210.1 34.072 361 227 6 8 365 148 500 2.62e-66 218
Msa0398500 AT3G20960.1 34.783 368 225 8 9 373 57 412 4.04e-66 216
Msa0398500 AT2G23220.1 34.247 365 215 10 8 369 166 508 4.08e-66 218
Msa0398500 AT3G26150.1 35.457 361 218 7 8 362 147 498 5.99e-66 217
Msa0398500 AT1G11610.1 34.078 358 219 7 8 362 150 493 1.48e-65 216
Msa0398500 AT4G31500.1 32.773 357 230 6 8 362 147 495 2.68e-65 216
Msa0398500 AT3G26180.2 40.927 259 146 4 106 362 111 364 2.76e-65 212
Msa0398500 AT3G20090.2 33.875 369 231 7 9 375 162 519 5.60e-65 215
Msa0398500 AT5G35715.1 32.500 360 229 7 8 362 83 433 6.93e-65 213
Msa0398500 AT2G23190.1 35.422 367 211 12 8 371 195 538 8.50e-65 215
Msa0398500 AT3G20960.2 34.783 368 225 8 9 373 160 515 8.70e-65 215
Msa0398500 AT3G26270.1 35.174 344 196 11 38 371 174 500 1.01e-64 214
Msa0398500 AT2G30750.1 36.697 327 190 7 39 362 181 493 1.53e-64 213
Msa0398500 AT5G24950.1 32.402 358 226 7 8 362 149 493 3.28e-64 213
Msa0398500 AT5G25120.1 33.333 369 222 6 1 362 139 490 4.27e-64 212
Msa0398500 AT5G36220.1 34.530 362 215 7 9 369 158 498 9.51e-64 211
Msa0398500 AT5G25140.1 33.611 360 219 6 8 362 146 490 1.13e-63 211
Msa0398500 AT3G48290.1 32.113 355 218 8 8 359 150 484 1.76e-63 211
Msa0398500 AT5G36220.2 34.582 347 206 6 23 369 27 352 1.96e-63 207
Msa0398500 AT4G37400.1 33.613 357 219 8 3 358 143 482 2.28e-63 211
Msa0398500 AT5G25130.1 33.613 357 223 5 8 362 146 490 2.66e-63 210
Msa0398500 AT1G01190.1 35.040 371 216 8 2 365 179 531 2.69e-63 211
Msa0398500 AT1G01190.2 35.040 371 216 8 2 365 184 536 2.78e-63 211
Msa0398500 AT1G11610.2 33.702 362 223 7 8 366 150 497 3.53e-63 210
Msa0398500 AT4G13770.1 32.778 360 228 7 8 363 148 497 1.16e-62 209
Msa0398500 AT5G47990.1 34.722 360 219 8 9 365 161 507 1.51e-62 209
Msa0398500 AT1G50560.1 34.807 362 218 9 12 371 172 517 7.11e-62 207
Msa0398500 AT2G02580.1 36.111 360 212 7 8 362 148 494 7.51e-62 206
Msa0398500 AT1G74110.1 32.853 347 213 7 28 365 201 536 3.39e-61 206
Msa0398500 AT1G13100.1 33.053 357 221 7 8 356 142 488 3.48e-61 204
Msa0398500 AT5G09970.1 38.462 338 175 11 8 331 186 504 5.06e-61 205
Msa0398500 AT4G15360.1 34.078 358 218 10 9 362 159 502 1.58e-60 204
Msa0398500 AT3G20950.1 35.501 369 221 10 9 373 165 520 1.85e-60 203
Msa0398500 AT2G24180.1 32.961 358 222 6 8 362 153 495 2.92e-60 202
Msa0398500 AT1G13090.2 33.721 344 205 9 8 342 145 474 3.61e-60 202
Msa0398500 AT2G14100.1 33.056 360 226 9 9 366 162 508 4.00e-60 202
Msa0398500 AT3G20120.2 32.320 362 231 8 9 368 24 373 4.50e-60 199
Msa0398500 AT3G20120.3 32.320 362 231 8 9 368 24 373 4.50e-60 199
Msa0398500 AT3G20120.1 32.320 362 231 8 9 368 24 373 4.50e-60 199
Msa0398500 AT4G15330.2 34.146 369 226 8 9 375 129 482 6.92e-60 201
Msa0398500 AT4G15350.1 33.516 364 226 9 8 367 153 504 1.11e-59 201
Msa0398500 AT4G15330.1 34.146 369 226 8 9 375 157 510 1.67e-59 201
Msa0398500 AT3G48320.1 32.011 353 219 7 8 358 149 482 2.12e-59 200
Msa0398500 AT5G24960.1 35.556 360 216 7 8 364 150 496 2.34e-59 200
Msa0398500 AT3G26200.1 33.425 362 227 8 8 364 145 497 3.72e-59 199
Msa0398500 AT5G42580.1 32.877 365 220 10 9 371 158 499 4.79e-59 199
Msa0398500 AT3G32047.1 33.724 341 211 8 8 347 160 486 5.85e-59 199
Msa0398500 AT3G20120.4 32.320 362 231 8 9 368 160 509 1.25e-58 198
Msa0398500 AT3G20100.1 32.410 361 228 8 10 366 161 509 1.26e-58 198
Msa0398500 AT2G46660.1 35.057 348 208 6 12 358 191 521 3.72e-58 197
Msa0398500 AT3G48290.2 29.921 381 218 9 8 359 150 510 6.65e-58 196
Msa0398500 AT3G20940.1 34.072 361 222 9 9 365 161 509 6.81e-58 197
Msa0398500 AT4G15380.1 33.535 331 201 7 38 365 190 504 8.10e-58 196
Msa0398500 AT2G25160.1 35.057 348 217 5 27 371 177 518 9.68e-58 196
Msa0398500 AT5G10600.1 33.602 372 226 9 1 368 157 511 2.73e-57 195
Msa0398500 AT1G28430.1 32.507 363 231 7 10 369 160 511 4.22e-57 194
Msa0398500 AT3G20130.2 31.680 363 233 8 9 368 133 483 7.43e-57 193
Msa0398500 AT3G61880.1 37.086 302 178 5 66 365 238 529 1.20e-56 194
Msa0398500 AT3G61880.2 37.086 302 178 5 66 365 238 529 1.43e-56 194
Msa0398500 AT5G10610.1 32.329 365 228 7 1 364 143 489 1.51e-56 192
Msa0398500 AT2G42250.1 31.302 361 231 7 8 362 158 507 1.56e-56 193
Msa0398500 AT3G20130.1 31.680 363 233 8 9 368 161 511 1.69e-56 193
Msa0398500 AT3G26190.1 32.967 364 222 8 8 362 145 495 2.18e-56 192
Msa0398500 AT3G26220.1 35.326 368 209 11 8 362 146 497 3.64e-56 192
Msa0398500 AT1G13710.1 34.203 345 199 9 26 365 191 512 3.78e-56 192
Msa0398500 AT1G50520.1 31.720 372 222 10 8 368 163 513 4.04e-56 192
Msa0398500 AT3G20140.1 32.869 359 224 9 9 365 161 504 1.04e-55 191
Msa0398500 AT3G44250.1 33.702 362 217 9 8 360 145 492 1.05e-55 190
Msa0398500 AT2G22330.1 34.848 330 206 5 9 333 179 504 3.49e-55 190
Msa0398500 AT2G22330.2 34.848 330 206 5 9 333 202 527 4.45e-55 190
Msa0398500 AT2G27000.1 32.692 364 225 10 10 369 159 506 4.61e-55 189
Msa0398500 AT4G39950.1 33.708 356 222 8 24 373 192 539 4.90e-55 189
Msa0398500 AT3G26830.1 37.500 272 160 5 82 348 215 481 6.02e-55 188
Msa0398500 AT4G39950.2 33.708 356 222 8 24 373 232 579 8.34e-55 190
Msa0398500 AT3G20080.4 31.832 333 213 8 38 367 53 374 1.59e-54 184
Msa0398500 AT3G20080.5 31.832 333 213 8 38 367 53 374 1.59e-54 184
Msa0398500 AT3G20080.6 31.832 333 213 8 38 367 53 374 1.59e-54 184
Msa0398500 AT3G20080.3 31.832 333 213 8 38 367 53 374 1.59e-54 184
Msa0398500 AT3G53300.1 32.222 360 230 7 8 362 145 495 8.00e-54 185
Msa0398500 AT5G05260.2 33.067 375 231 10 9 373 165 529 8.47e-54 186
Msa0398500 AT3G20110.1 33.151 365 221 9 9 370 158 502 1.14e-53 185
Msa0398500 AT2G27010.1 33.234 337 211 8 40 373 167 492 2.34e-53 184
Msa0398500 AT5G06905.1 30.526 380 243 8 8 373 148 520 3.01e-53 184
Msa0398500 AT3G20080.2 31.832 333 213 8 38 367 190 511 3.32e-53 184
Msa0398500 AT3G20080.1 31.832 333 213 8 38 367 190 511 3.32e-53 184
Msa0398500 AT5G42590.1 33.880 366 225 10 1 362 142 494 4.63e-53 183
Msa0398500 AT3G53280.1 34.954 329 197 8 41 362 175 493 1.77e-52 182
Msa0398500 AT3G20935.1 32.493 357 202 12 46 373 2 348 5.50e-51 174
Msa0398500 AT1G79370.1 32.011 378 231 9 11 371 170 538 4.91e-50 176
Msa0398500 AT5G05260.1 31.806 371 209 9 9 373 165 497 5.80e-49 172
Msa0398500 AT2G30490.1 34.337 332 208 5 1 329 144 468 5.87e-48 170
Msa0398500 AT1G58260.1 29.730 370 248 5 9 371 161 525 3.05e-46 166
Msa0398500 AT4G13310.2 36.400 250 145 6 8 253 149 388 5.16e-46 162
Msa0398500 AT1G16400.1 31.398 379 231 11 10 371 166 532 2.89e-45 163
Msa0398500 AT1G16410.1 30.239 377 238 8 10 371 167 533 1.21e-44 161
Msa0398500 AT5G04630.1 34.375 256 157 5 82 331 226 476 8.41e-42 153
Msa0398500 AT3G61040.2 35.714 252 151 6 9 258 151 393 1.50e-41 150
Msa0398500 AT2G05180.1 32.042 284 182 6 9 288 160 436 1.16e-40 149
Msa0398500 AT5G25900.1 31.000 300 191 6 66 365 224 507 2.64e-40 149
Msa0398500 AT3G53290.1 31.707 369 197 12 8 362 75 402 3.79e-40 147
Msa0398500 AT1G11600.1 41.489 188 109 1 145 331 291 478 1.74e-39 147
Msa0398500 AT5G04660.1 32.653 294 181 7 81 366 228 512 2.94e-39 146
Msa0398500 AT1G64930.1 34.874 238 146 5 130 365 278 508 3.41e-39 146
Msa0398500 AT1G64940.1 32.819 259 158 6 114 365 259 508 3.92e-39 146
Msa0398500 AT3G10570.1 34.733 262 158 6 111 366 259 513 6.10e-39 145
Msa0398500 AT3G10560.1 32.404 287 177 7 84 363 236 512 1.47e-38 144
Msa0398500 AT2G45580.3 32.669 251 158 4 9 255 159 402 4.58e-38 141
Msa0398500 AT4G20240.1 33.566 286 176 8 8 291 150 423 1.61e-37 140
Msa0398500 AT2G12190.1 34.413 247 148 6 114 353 258 497 1.76e-35 136
Msa0398500 AT1G64950.1 33.591 259 156 6 114 365 258 507 1.96e-34 133
Msa0398500 AT3G03470.1 34.568 243 146 7 133 365 270 509 2.28e-33 130
Msa0398500 AT5G61320.1 32.095 296 152 8 80 358 217 480 5.86e-33 129
Msa0398500 AT3G25180.2 29.752 242 164 3 8 247 158 395 5.24e-31 122
Msa0398500 AT3G53305.1 45.652 138 66 2 209 346 184 312 3.02e-30 119
Msa0398500 AT1G64900.1 33.984 256 158 6 114 365 255 503 3.86e-30 121
Msa0398500 AT5G35917.1 26.790 377 211 13 9 373 167 490 7.32e-30 120
Msa0398500 AT1G19630.1 32.035 231 139 6 107 333 232 448 1.58e-29 119
Msa0398500 AT4G20240.2 33.465 254 156 7 8 260 150 391 5.55e-29 116
Msa0398500 AT1G19630.3 31.441 229 139 6 107 331 232 446 1.25e-27 113
Msa0398500 AT2G45510.1 24.566 346 231 8 7 335 150 482 2.04e-27 113
Msa0398500 AT2G44890.1 23.955 359 217 8 7 335 150 482 3.22e-26 110
Msa0398500 AT2G25160.2 32.618 233 153 3 27 256 177 408 3.53e-26 109
Msa0398500 AT5G35920.1 37.419 155 92 2 219 373 6 155 4.47e-26 102
Msa0398500 AT5G24960.2 33.071 254 159 5 8 259 150 394 5.25e-26 108
Msa0398500 AT1G31800.1 24.872 390 238 11 7 368 220 582 1.10e-25 108
Msa0398500 AT4G15110.1 26.687 326 205 7 40 333 227 550 2.34e-25 107
Msa0398500 AT2G44890.2 23.315 356 205 8 7 335 150 464 6.31e-24 103
Msa0398500 AT1G19630.2 33.708 178 109 4 107 280 232 404 7.24e-23 99.8
Msa0398500 AT5G23190.1 25.468 267 169 7 89 336 261 516 5.38e-22 97.8
Msa0398500 AT5G58860.1 29.237 236 145 6 96 319 242 467 3.47e-21 95.5
Msa0398500 AT1G63710.1 27.376 263 163 8 80 326 223 473 1.15e-20 94.0
Msa0398500 AT2G26170.2 28.856 201 138 3 130 329 209 405 1.29e-20 93.2
Msa0398500 AT1G16410.2 29.297 256 158 7 10 250 167 414 1.32e-20 93.2
Msa0398500 AT2G45970.1 27.165 254 160 7 90 327 234 478 1.62e-20 93.6
Msa0398500 AT2G26170.1 29.703 202 134 4 130 330 292 486 2.09e-20 93.2
Msa0398500 AT3G14620.1 23.193 332 232 9 7 333 175 488 2.44e-20 92.8
Msa0398500 AT5G08250.1 25.397 252 164 6 96 330 202 446 1.29e-19 90.5
Msa0398500 AT1G01600.1 25.373 268 171 8 80 327 223 481 1.36e-19 90.9
Msa0398500 AT5G08250.2 25.397 252 164 6 96 330 264 508 1.78e-19 90.5
Msa0398500 AT1G24540.1 23.134 268 185 6 86 336 233 496 2.69e-19 89.7
Msa0398500 AT3G53130.1 28.070 228 140 5 115 333 300 512 3.04e-19 89.7
Msa0398500 AT3G26125.1 24.016 254 171 5 95 330 253 502 3.20e-19 89.7
Msa0398500 AT2G26710.1 25.714 315 201 10 28 333 198 488 3.63e-19 89.4
Msa0398500 AT1G47620.1 24.904 261 174 7 90 336 239 491 3.80e-19 89.4
Msa0398500 AT5G52400.1 28.253 269 171 10 99 362 267 518 7.63e-19 88.6
Msa0398500 AT1G05160.2 30.962 239 143 8 95 329 236 456 8.21e-19 88.2
Msa0398500 AT1G05160.1 30.962 239 143 8 95 329 236 456 8.21e-19 88.2
Msa0398500 AT1G11680.1 30.476 210 134 4 141 343 264 468 1.21e-18 87.8
Msa0398500 AT4G00360.1 24.812 266 173 9 80 327 223 479 2.57e-18 87.0
Msa0398500 AT3G14680.1 24.629 337 231 11 3 333 166 485 4.11e-18 86.3
Msa0398500 AT4G39480.1 24.579 297 190 7 96 375 236 515 6.16e-18 85.5
Msa0398500 AT3G14610.1 27.004 237 163 6 100 333 256 485 1.04e-17 85.1
Msa0398500 AT5G05690.3 27.437 277 179 8 58 331 65 322 1.41e-17 83.6
Msa0398500 AT2G32440.2 29.804 255 155 9 78 329 220 453 1.59e-17 84.3
Msa0398500 AT2G32440.1 29.804 255 155 9 78 329 220 453 1.59e-17 84.3
Msa0398500 AT5G05690.1 27.437 277 179 8 58 331 184 441 1.90e-17 84.0
Msa0398500 AT3G14640.1 24.316 329 222 12 10 333 181 487 6.11e-17 82.8
Msa0398500 AT3G14640.2 24.316 329 222 12 10 333 203 509 7.26e-17 82.4
Msa0398500 AT4G27710.1 24.373 279 201 5 85 362 247 516 7.47e-17 82.4
Msa0398500 AT4G39500.1 23.780 328 209 10 60 357 152 468 7.54e-17 82.0
Msa0398500 AT2G46950.1 28.000 250 171 6 85 333 302 543 7.56e-17 82.4
Msa0398500 AT4G39500.2 23.780 328 209 10 60 357 202 518 7.90e-17 82.4
Msa0398500 AT3G30180.1 27.046 281 173 11 61 336 189 442 8.24e-17 82.0
Msa0398500 AT5G24900.2 30.114 176 112 6 161 333 216 383 1.62e-16 80.9
Msa0398500 AT1G57750.1 23.552 259 179 7 91 342 232 478 1.82e-16 81.3
Msa0398500 AT5G24900.1 27.004 237 156 9 104 333 274 500 2.76e-16 80.9
Msa0398500 AT3G14650.1 22.961 331 235 8 7 333 171 485 2.84e-16 80.5
Msa0398500 AT1G69500.1 21.751 377 225 9 7 333 140 496 4.16e-16 80.1
Msa0398500 AT5G38970.2 28.226 248 139 9 96 332 139 358 4.81e-16 79.3
Msa0398500 AT5G38970.4 28.226 248 139 9 96 332 139 358 4.81e-16 79.3
Msa0398500 AT1G75130.1 25.256 293 196 7 42 333 206 476 4.84e-16 79.7
Msa0398500 AT1G34540.1 27.917 240 152 8 97 329 241 466 5.37e-16 79.7
Msa0398500 AT5G52320.2 24.895 237 161 5 96 325 237 463 5.50e-16 79.7
Msa0398500 AT5G52320.1 24.895 237 161 5 96 325 237 463 5.72e-16 79.7
Msa0398500 AT5G24910.1 24.430 307 210 12 34 333 214 505 5.91e-16 79.7
Msa0398500 AT4G39490.1 22.263 274 185 6 87 336 223 492 7.24e-16 79.3
Msa0398500 AT5G38970.1 28.226 248 139 9 96 332 220 439 1.00e-15 79.0
Msa0398500 AT2G23180.1 23.137 255 179 5 96 336 237 488 1.30e-15 78.6
Msa0398500 AT3G14630.1 24.375 320 221 10 17 333 180 481 1.34e-15 78.6
Msa0398500 AT3G14660.2 22.356 331 237 9 7 333 25 339 1.56e-15 77.8
Msa0398500 AT5G45340.1 29.218 243 137 10 100 333 220 436 1.59e-15 78.2
Msa0398500 AT3G14630.2 25.234 321 217 12 17 333 235 536 1.79e-15 78.2
Msa0398500 AT3G44970.1 25.818 275 174 7 64 333 202 451 2.16e-15 77.8
Msa0398500 AT4G32170.1 23.529 255 180 8 91 336 231 479 2.41e-15 77.8
Msa0398500 AT3G14660.1 22.356 331 237 9 7 333 171 485 3.23e-15 77.4
Msa0398500 AT1G55940.2 26.644 289 171 12 85 364 228 484 3.67e-15 77.0
Msa0398500 AT3G50660.1 29.245 212 129 5 140 333 279 487 4.32e-15 77.0
Msa0398500 AT3G14690.1 22.154 325 236 7 10 333 177 485 6.79e-15 76.3
Msa0398500 AT3G14690.2 22.699 326 235 9 9 333 211 520 6.88e-15 76.6
Msa0398500 AT1G55940.1 26.587 252 154 9 85 327 228 457 8.44e-15 75.9
Msa0398500 AT5G38450.1 27.545 334 218 10 6 333 174 489 9.51e-15 75.9
Msa0398500 AT2G42850.1 25.573 262 173 5 75 333 215 457 9.83e-15 75.9
Msa0398500 AT2G21910.1 25.194 258 175 7 91 336 231 482 1.06e-14 75.9
Msa0398500 AT4G39510.1 24.706 340 202 15 26 336 167 481 2.74e-14 74.7
Msa0398500 AT1G13150.1 23.077 247 174 6 95 330 246 487 4.51e-14 73.9
Msa0398500 AT1G13140.1 24.735 283 186 10 61 328 218 488 4.59e-14 73.9
Msa0398500 AT4G36380.1 24.896 241 165 6 100 334 259 489 6.96e-14 73.2
Msa0398500 AT2G29090.3 27.320 194 127 3 144 333 178 361 1.18e-13 72.0
Msa0398500 AT2G29090.2 27.320 194 127 3 144 333 273 456 1.74e-13 72.0
Msa0398500 AT2G29090.1 27.320 194 127 3 144 333 273 456 1.74e-13 72.0
Msa0398500 AT1G13140.2 25.837 209 136 6 131 328 262 462 1.96e-13 72.0
Msa0398500 AT3G19270.1 26.087 230 150 6 106 331 225 438 3.09e-13 71.2
Msa0398500 AT1G57750.2 25.714 210 142 6 91 295 232 432 3.98e-13 70.9
Msa0398500 AT5G02900.1 23.502 217 159 4 124 336 241 454 5.21e-13 70.5
Msa0398500 AT4G15393.2 28.125 192 104 8 159 334 272 445 6.88e-13 70.1
Msa0398500 AT4G20235.1 30.345 145 79 5 195 335 206 332 1.39e-12 68.6
Msa0398500 AT1G67110.1 28.000 250 164 4 85 333 249 483 1.67e-12 68.9
Msa0398500 AT2G46960.1 27.706 231 156 6 103 331 150 371 2.04e-12 68.6
Msa0398500 AT4G15300.3 24.653 288 183 11 57 336 177 438 2.49e-12 68.6
Msa0398500 AT2G46960.2 27.016 248 169 7 86 331 250 487 2.55e-12 68.6
Msa0398500 AT4G15300.2 24.653 288 183 11 57 336 187 448 2.63e-12 68.6
Msa0398500 AT4G15310.1 27.723 202 126 8 141 334 260 449 3.38e-12 68.2
Msa0398500 AT4G15300.1 24.554 224 151 7 120 336 248 460 4.91e-12 67.4
Msa0398500 AT4G20235.2 33.981 103 61 2 18 119 4 100 4.92e-12 63.5
Msa0398500 AT5G05690.2 26.991 226 148 6 58 280 184 395 7.81e-12 66.6
Msa0398500 AT3G30290.1 26.923 182 116 7 159 334 206 376 1.72e-11 65.5
Msa0398500 AT5G14400.2 23.849 239 141 7 103 335 190 393 4.99e-11 64.3
Msa0398500 AT5G14400.1 23.849 239 141 7 103 335 136 339 4.99e-11 63.9
Msa0398500 AT5G38970.3 28.497 193 114 7 96 281 220 395 5.09e-11 64.3

Find 86 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGGTTCATTCGTTTAAT+TGG 0.139242 3_2:+20119954 Msa0398500:CDS
CTTTCAGGATTAAACATTAA+TGG 0.171992 3_2:-20119797 None:intergenic
CCACCTGGTAAGAACCTTTC+AGG 0.229853 3_2:-20119812 None:intergenic
TTTAATTGGGAGCTTGAAAA+TGG 0.235577 3_2:+20119968 Msa0398500:CDS
AGCAAGATTGGTCAACAATT+TGG 0.265460 3_2:+20118580 Msa0398500:CDS
TAGCTCGTGACCCAGGAAAA+TGG 0.272975 3_2:+20119768 Msa0398500:CDS
TCTGAAAGTTGTGAGGTTTA+TGG 0.274996 3_2:+20119698 Msa0398500:CDS
TGTGGCAAGAGCCTTGGTTT+AGG 0.293539 3_2:-20120067 None:intergenic
CTGAAAGTTGTGAGGTTTAT+GGG 0.301313 3_2:+20119699 Msa0398500:CDS
TCCAAAGGGTTCGACTCTTT+TGG 0.312497 3_2:+20119730 Msa0398500:CDS
GGTTTAGGGTGCACTAATAA+TGG 0.317409 3_2:-20120052 None:intergenic
GTGGCAAGAGCCTTGGTTTA+GGG 0.323857 3_2:-20120066 None:intergenic
TTCTGCAATGGCCCATTCTA+TGG 0.325086 3_2:-20119501 None:intergenic
CTTGGTTCATTCGTTTAATT+GGG 0.329295 3_2:+20119955 Msa0398500:CDS
AACCAAAGTTCAACAAGAAT+TGG 0.334184 3_2:+20119547 Msa0398500:CDS
TCCTGAAAATGCAATTGATT+AGG 0.340597 3_2:-20118551 None:intergenic
GCCTTAAAATCACCAGCTTT+AGG 0.348130 3_2:-20118728 None:intergenic
ATAAACATGGATGAAGCTTT+TGG 0.351166 3_2:+20120007 Msa0398500:CDS
CACATTATTGTCACTTAAAG+AGG 0.364940 3_2:+20118949 Msa0398500:CDS
CTCCAATTCTTGTTGAACTT+TGG 0.376868 3_2:-20119549 None:intergenic
GGCTATGGTTGATGAGTTGA+TGG 0.380994 3_2:+20118748 Msa0398500:CDS
ATTCTTGTTGAACTTTGGTT+AGG 0.394757 3_2:-20119544 None:intergenic
ATATGTGCGGGTTTGAATCT+AGG 0.397879 3_2:+20119902 Msa0398500:CDS
TCAGGAAGAGGTAGCAAGAT+TGG 0.399698 3_2:+20118568 Msa0398500:CDS
TGAGATCAAAGGACTACTTA+TGG 0.414948 3_2:+20119006 Msa0398500:CDS
GGGAGGGAAAGAGGTGTTGA+TGG 0.415473 3_2:-20119665 None:intergenic
AGCTCGTGACCCAGGAAAAT+GGG 0.418183 3_2:+20119769 Msa0398500:CDS
GTCCAGAACATGTTTGTAGC+TGG 0.424221 3_2:+20119458 Msa0398500:intron
GCACTTGCCAGGGCTGTGAT+AGG 0.430637 3_2:+20118668 Msa0398500:CDS
ACCAAAAGAGTCGAACCCTT+TGG 0.436650 3_2:-20119731 None:intergenic
AGAGTATTTAATGAAGGAAA+TGG 0.440442 3_2:+20118695 Msa0398500:CDS
TTTACCACTGCTTGTAGGTA+AGG 0.445410 3_2:-20119623 None:intergenic
CCAACTTCAAATTGCTACCT+TGG 0.446500 3_2:+20119937 Msa0398500:CDS
TTCTAAGAGTGAGAAACATA+AGG 0.446946 3_2:+20118916 Msa0398500:CDS
GTACCACCAATGCACTTGCC+AGG 0.447916 3_2:+20118657 Msa0398500:CDS
TTGGAATGGCTAGACCTTCA+AGG 0.459242 3_2:+20118812 Msa0398500:CDS
TACACATGTGGCAAGAGCCT+TGG 0.475493 3_2:-20120073 None:intergenic
GCTTGTAGGTAAGGTAGCTT+AGG 0.478770 3_2:-20119614 None:intergenic
CAACATCAGTCACCATAGAA+TGG 0.485096 3_2:+20119489 Msa0398500:CDS
GGAAGGAGAGTATTTAATGA+AGG 0.487431 3_2:+20118689 Msa0398500:CDS
AACTCAAAAGTTGTGAACTT+AGG 0.498164 3_2:+20118617 Msa0398500:CDS
ATTTATAACAAACATTATTG+AGG 0.498546 3_2:+20118877 Msa0398500:CDS
TCCAGAACATGTTTGTAGCT+GGG 0.500022 3_2:+20119459 Msa0398500:intron
AGGTCTAGCCATTCCAATGA+TGG 0.501236 3_2:-20118806 None:intergenic
CCAAGGTAGCAATTTGAAGT+TGG 0.502677 3_2:-20119937 None:intergenic
CATTAATGTTTAATCCTGAA+AGG 0.503331 3_2:+20119798 Msa0398500:CDS
AACATCAGTCACCATAGAAT+GGG 0.505291 3_2:+20119490 Msa0398500:CDS
CACAGCCCTGGCAAGTGCAT+TGG 0.507437 3_2:-20118663 None:intergenic
GCAATTCGTGGGAGGGAAAG+AGG 0.513610 3_2:-20119674 None:intergenic
AGCCCTGGCAAGTGCATTGG+TGG 0.526620 3_2:-20118660 None:intergenic
AATCCTGAAAGGTTCTTACC+AGG 0.535377 3_2:+20119809 Msa0398500:CDS
GGGCCATTGCAGAATTGCTC+CGG 0.536042 3_2:+20119510 Msa0398500:CDS
CAAGAATTGGAGACTGTTGT+CGG 0.537958 3_2:+20119560 Msa0398500:CDS
TTCAGATGCAATTCGTGGGA+GGG 0.544027 3_2:-20119681 None:intergenic
CAACTTTCAGATGCAATTCG+TGG 0.544478 3_2:-20119686 None:intergenic
CTCACTGATATTGAGATCAA+AGG 0.549925 3_2:+20118995 Msa0398500:CDS
TATGGGTACCACATTCCAAA+GGG 0.554084 3_2:+20119716 Msa0398500:CDS
AAAGAGGAAACAGATGAAGA+TGG 0.560934 3_2:+20118965 Msa0398500:CDS
TTGCCAGGGCTGTGATAGGA+AGG 0.561305 3_2:+20118672 Msa0398500:CDS
ATTCCGGAGCAATTCTGCAA+TGG 0.561802 3_2:-20119513 None:intergenic
AAATGAAGAAATTACACAAG+AGG 0.562360 3_2:+20118846 Msa0398500:CDS
ATTCTACGTCCAGCACCAAA+AGG 0.564175 3_2:-20119881 None:intergenic
AACTTTCAGATGCAATTCGT+GGG 0.569424 3_2:-20119685 None:intergenic
GGAGGGAAAGAGGTGTTGAT+GGG 0.571537 3_2:-20119664 None:intergenic
TTATGGGTACCACATTCCAA+AGG 0.580070 3_2:+20119715 Msa0398500:CDS
TCTCCTTCCTATCACAGCCC+TGG 0.583209 3_2:-20118675 None:intergenic
AGACTGTTGTCGGACTAGAC+AGG 0.585388 3_2:+20119570 Msa0398500:CDS
ACATCACAGTTCTCACCACC+TGG 0.591498 3_2:-20119827 None:intergenic
GAGTCGAACCCTTTGGAATG+TGG 0.594289 3_2:-20119724 None:intergenic
TTTCAGATGCAATTCGTGGG+AGG 0.598313 3_2:-20119682 None:intergenic
AACTGTGATGTTGATGTGAA+GGG 0.603660 3_2:+20119839 Msa0398500:CDS
TGGGCCATAGCTCGTGACCC+AGG 0.606063 3_2:+20119761 Msa0398500:CDS
AATTGCATCTGAAAGTTGTG+AGG 0.609670 3_2:+20119691 Msa0398500:CDS
GAACTGTGATGTTGATGTGA+AGG 0.612518 3_2:+20119838 Msa0398500:CDS
TACCACCAATGCACTTGCCA+GGG 0.615186 3_2:+20118658 Msa0398500:CDS
TTTGAATCTAGGAATTCGAA+TGG 0.618536 3_2:+20119913 Msa0398500:CDS
TGCTGGACGTAGAATATGTG+CGG 0.620631 3_2:+20119889 Msa0398500:CDS
GCACAGCTCTCATAATACCT+AGG 0.626131 3_2:-20120030 None:intergenic
AGACAGGAACGTGAAAGATG+AGG 0.649003 3_2:+20119586 Msa0398500:CDS
AAATGCAAAAGACATAAACA+TGG 0.651119 3_2:+20119994 Msa0398500:CDS
GCTACCTTACCTACAAGCAG+TGG 0.663158 3_2:+20119619 Msa0398500:CDS
CCAATTAAACGAATGAACCA+AGG 0.668452 3_2:-20119954 None:intergenic
AAACATGACGAGTACACATG+TGG 0.674871 3_2:-20120085 None:intergenic
GCTGGACGTAGAATATGTGC+GGG 0.683743 3_2:+20119890 Msa0398500:CDS
CCTGAAAGGTTCTTACCAGG+TGG 0.695047 3_2:+20119812 Msa0398500:CDS
TATTAGTGCACCCTAAACCA+AGG 0.700547 3_2:+20120056 Msa0398500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATAACAAACATTATTG+AGG + chr3_2:20118877-20118896 Msa0398500:CDS 15.0%
!! AGAAATGAAAATATTGAAAA+TGG + chr3_2:20119072-20119091 Msa0398500:intron 15.0%
!! TTTATAACATATAGTTAACA+TGG - chr3_2:20119148-20119167 None:intergenic 15.0%
!!! TATAGTTTTTTTTTGTTTGA+AGG - chr3_2:20119326-20119345 None:intergenic 15.0%
!! ATTTATAACAAACATTATTG+AGG + chr3_2:20118877-20118896 Msa0398500:CDS 15.0%
!! AGAAATGAAAATATTGAAAA+TGG + chr3_2:20119072-20119091 Msa0398500:intron 15.0%
!! TTTATAACATATAGTTAACA+TGG - chr3_2:20119148-20119167 None:intergenic 15.0%
!!! TATAGTTTTTTTTTGTTTGA+AGG - chr3_2:20119326-20119345 None:intergenic 15.0%
!! CTATATGATATAGAAAGAAA+AGG + chr3_2:20119243-20119262 Msa0398500:intron 20.0%
!! CTATATGATATAGAAAGAAA+AGG + chr3_2:20119243-20119262 Msa0398500:intron 20.0%
!! AGAGTATTTAATGAAGGAAA+TGG + chr3_2:20118695-20118714 Msa0398500:CDS 25.0%
!! ATTTTATTCCATCATTGGAA+TGG + chr3_2:20118798-20118817 Msa0398500:CDS 25.0%
! AAATGAAGAAATTACACAAG+AGG + chr3_2:20118846-20118865 Msa0398500:CDS 25.0%
! TTGCAACGTGATTTAAATTT+AGG - chr3_2:20119271-20119290 None:intergenic 25.0%
! CTTTCAGGATTAAACATTAA+TGG - chr3_2:20119800-20119819 None:intergenic 25.0%
! CATTAATGTTTAATCCTGAA+AGG + chr3_2:20119798-20119817 Msa0398500:CDS 25.0%
! AAATGCAAAAGACATAAACA+TGG + chr3_2:20119994-20120013 Msa0398500:CDS 25.0%
!! AGAGTATTTAATGAAGGAAA+TGG + chr3_2:20118695-20118714 Msa0398500:CDS 25.0%
!! ATTTTATTCCATCATTGGAA+TGG + chr3_2:20118798-20118817 Msa0398500:CDS 25.0%
! AAATGAAGAAATTACACAAG+AGG + chr3_2:20118846-20118865 Msa0398500:CDS 25.0%
! TTGCAACGTGATTTAAATTT+AGG - chr3_2:20119271-20119290 None:intergenic 25.0%
! CTTTCAGGATTAAACATTAA+TGG - chr3_2:20119800-20119819 None:intergenic 25.0%
! CATTAATGTTTAATCCTGAA+AGG + chr3_2:20119798-20119817 Msa0398500:CDS 25.0%
! AAATGCAAAAGACATAAACA+TGG + chr3_2:20119994-20120013 Msa0398500:CDS 25.0%
! ACCTAATCAATTGCATTTTC+AGG + chr3_2:20118550-20118569 Msa0398500:CDS 30.0%
TCCTGAAAATGCAATTGATT+AGG - chr3_2:20118554-20118573 None:intergenic 30.0%
AACTCAAAAGTTGTGAACTT+AGG + chr3_2:20118617-20118636 Msa0398500:CDS 30.0%
! TGGTGATTTTATTCCATCAT+TGG + chr3_2:20118793-20118812 Msa0398500:CDS 30.0%
! TTCTAAGAGTGAGAAACATA+AGG + chr3_2:20118916-20118935 Msa0398500:CDS 30.0%
! CACATTATTGTCACTTAAAG+AGG + chr3_2:20118949-20118968 Msa0398500:CDS 30.0%
! GATTCAATTTTCCAAAGAGT+AGG - chr3_2:20119039-20119058 None:intergenic 30.0%
TTAGACGATTCAAACAATTG+TGG + chr3_2:20119103-20119122 Msa0398500:intron 30.0%
GGTCAATGTCAAAGTTTATT+TGG - chr3_2:20119395-20119414 None:intergenic 30.0%
!!! TGGTTAGGATTTTTTGATTC+CGG - chr3_2:20119532-20119551 None:intergenic 30.0%
ATTCTTGTTGAACTTTGGTT+AGG - chr3_2:20119547-20119566 None:intergenic 30.0%
AACCAAAGTTCAACAAGAAT+TGG + chr3_2:20119547-20119566 Msa0398500:CDS 30.0%
! GACTCTTTTGGTAAATGTAT+GGG + chr3_2:20119742-20119761 Msa0398500:CDS 30.0%
!!! GATTTTGAGGTTATACCTTT+TGG + chr3_2:20119866-20119885 Msa0398500:CDS 30.0%
TTTGAATCTAGGAATTCGAA+TGG + chr3_2:20119913-20119932 Msa0398500:CDS 30.0%
CTTGGTTCATTCGTTTAATT+GGG + chr3_2:20119955-20119974 Msa0398500:CDS 30.0%
TTTAATTGGGAGCTTGAAAA+TGG + chr3_2:20119968-20119987 Msa0398500:CDS 30.0%
! ATAAACATGGATGAAGCTTT+TGG + chr3_2:20120007-20120026 Msa0398500:CDS 30.0%
! ACCTAATCAATTGCATTTTC+AGG + chr3_2:20118550-20118569 Msa0398500:CDS 30.0%
TCCTGAAAATGCAATTGATT+AGG - chr3_2:20118554-20118573 None:intergenic 30.0%
AACTCAAAAGTTGTGAACTT+AGG + chr3_2:20118617-20118636 Msa0398500:CDS 30.0%
! TGGTGATTTTATTCCATCAT+TGG + chr3_2:20118793-20118812 Msa0398500:CDS 30.0%
! TTCTAAGAGTGAGAAACATA+AGG + chr3_2:20118916-20118935 Msa0398500:CDS 30.0%
! CACATTATTGTCACTTAAAG+AGG + chr3_2:20118949-20118968 Msa0398500:CDS 30.0%
! GATTCAATTTTCCAAAGAGT+AGG - chr3_2:20119039-20119058 None:intergenic 30.0%
TTAGACGATTCAAACAATTG+TGG + chr3_2:20119103-20119122 Msa0398500:intron 30.0%
GGTCAATGTCAAAGTTTATT+TGG - chr3_2:20119395-20119414 None:intergenic 30.0%
!!! TGGTTAGGATTTTTTGATTC+CGG - chr3_2:20119532-20119551 None:intergenic 30.0%
ATTCTTGTTGAACTTTGGTT+AGG - chr3_2:20119547-20119566 None:intergenic 30.0%
AACCAAAGTTCAACAAGAAT+TGG + chr3_2:20119547-20119566 Msa0398500:CDS 30.0%
! GACTCTTTTGGTAAATGTAT+GGG + chr3_2:20119742-20119761 Msa0398500:CDS 30.0%
!!! GATTTTGAGGTTATACCTTT+TGG + chr3_2:20119866-20119885 Msa0398500:CDS 30.0%
TTTGAATCTAGGAATTCGAA+TGG + chr3_2:20119913-20119932 Msa0398500:CDS 30.0%
CTTGGTTCATTCGTTTAATT+GGG + chr3_2:20119955-20119974 Msa0398500:CDS 30.0%
TTTAATTGGGAGCTTGAAAA+TGG + chr3_2:20119968-20119987 Msa0398500:CDS 30.0%
! ATAAACATGGATGAAGCTTT+TGG + chr3_2:20120007-20120026 Msa0398500:CDS 30.0%
!! TCAATTGCATTTTCAGGAAG+AGG + chr3_2:20118556-20118575 Msa0398500:CDS 35.0%
! AGCAAGATTGGTCAACAATT+TGG + chr3_2:20118580-20118599 Msa0398500:CDS 35.0%
!! GGAAGGAGAGTATTTAATGA+AGG + chr3_2:20118689-20118708 Msa0398500:CDS 35.0%
! TCCTAAAGCTGGTGATTTTA+AGG + chr3_2:20118727-20118746 Msa0398500:CDS 35.0%
!!! GTTGATGAGTTGATGGTTTT+AGG + chr3_2:20118755-20118774 Msa0398500:CDS 35.0%
! TTAGGTGGAGTTTTCAACAT+TGG + chr3_2:20118773-20118792 Msa0398500:CDS 35.0%
!!! TTTTAGCTTGAAGTCCTTGA+AGG - chr3_2:20118829-20118848 None:intergenic 35.0%
AAAGAGGAAACAGATGAAGA+TGG + chr3_2:20118965-20118984 Msa0398500:CDS 35.0%
CTCACTGATATTGAGATCAA+AGG + chr3_2:20118995-20119014 Msa0398500:CDS 35.0%
TGAGATCAAAGGACTACTTA+TGG + chr3_2:20119006-20119025 Msa0398500:CDS 35.0%
ATGGTATGTTACCTACTCTT+TGG + chr3_2:20119025-20119044 Msa0398500:intron 35.0%
AACATCAGTCACCATAGAAT+GGG + chr3_2:20119490-20119509 Msa0398500:CDS 35.0%
CTCCAATTCTTGTTGAACTT+TGG - chr3_2:20119552-20119571 None:intergenic 35.0%
! TTTCTTTTACCACTGCTTGT+AGG - chr3_2:20119631-20119650 None:intergenic 35.0%
AACTTTCAGATGCAATTCGT+GGG - chr3_2:20119688-20119707 None:intergenic 35.0%
AATTGCATCTGAAAGTTGTG+AGG + chr3_2:20119691-20119710 Msa0398500:CDS 35.0%
TCTGAAAGTTGTGAGGTTTA+TGG + chr3_2:20119698-20119717 Msa0398500:CDS 35.0%
CTGAAAGTTGTGAGGTTTAT+GGG + chr3_2:20119699-20119718 Msa0398500:CDS 35.0%
! CGACTCTTTTGGTAAATGTA+TGG + chr3_2:20119741-20119760 Msa0398500:CDS 35.0%
AACTGTGATGTTGATGTGAA+GGG + chr3_2:20119839-20119858 Msa0398500:CDS 35.0%
! TGTGAAGGGAAATGATTTTG+AGG + chr3_2:20119853-20119872 Msa0398500:CDS 35.0%
CCAATTAAACGAATGAACCA+AGG - chr3_2:20119957-20119976 None:intergenic 35.0%
CCTTGGTTCATTCGTTTAAT+TGG + chr3_2:20119954-20119973 Msa0398500:CDS 35.0%
!! TCAATTGCATTTTCAGGAAG+AGG + chr3_2:20118556-20118575 Msa0398500:CDS 35.0%
! AGCAAGATTGGTCAACAATT+TGG + chr3_2:20118580-20118599 Msa0398500:CDS 35.0%
!! GGAAGGAGAGTATTTAATGA+AGG + chr3_2:20118689-20118708 Msa0398500:CDS 35.0%
! TCCTAAAGCTGGTGATTTTA+AGG + chr3_2:20118727-20118746 Msa0398500:CDS 35.0%
!!! GTTGATGAGTTGATGGTTTT+AGG + chr3_2:20118755-20118774 Msa0398500:CDS 35.0%
! TTAGGTGGAGTTTTCAACAT+TGG + chr3_2:20118773-20118792 Msa0398500:CDS 35.0%
!!! TTTTAGCTTGAAGTCCTTGA+AGG - chr3_2:20118829-20118848 None:intergenic 35.0%
AAAGAGGAAACAGATGAAGA+TGG + chr3_2:20118965-20118984 Msa0398500:CDS 35.0%
CTCACTGATATTGAGATCAA+AGG + chr3_2:20118995-20119014 Msa0398500:CDS 35.0%
TGAGATCAAAGGACTACTTA+TGG + chr3_2:20119006-20119025 Msa0398500:CDS 35.0%
ATGGTATGTTACCTACTCTT+TGG + chr3_2:20119025-20119044 Msa0398500:intron 35.0%
AACATCAGTCACCATAGAAT+GGG + chr3_2:20119490-20119509 Msa0398500:CDS 35.0%
CTCCAATTCTTGTTGAACTT+TGG - chr3_2:20119552-20119571 None:intergenic 35.0%
! TTTCTTTTACCACTGCTTGT+AGG - chr3_2:20119631-20119650 None:intergenic 35.0%
AACTTTCAGATGCAATTCGT+GGG - chr3_2:20119688-20119707 None:intergenic 35.0%
AATTGCATCTGAAAGTTGTG+AGG + chr3_2:20119691-20119710 Msa0398500:CDS 35.0%
TCTGAAAGTTGTGAGGTTTA+TGG + chr3_2:20119698-20119717 Msa0398500:CDS 35.0%
CTGAAAGTTGTGAGGTTTAT+GGG + chr3_2:20119699-20119718 Msa0398500:CDS 35.0%
! CGACTCTTTTGGTAAATGTA+TGG + chr3_2:20119741-20119760 Msa0398500:CDS 35.0%
AACTGTGATGTTGATGTGAA+GGG + chr3_2:20119839-20119858 Msa0398500:CDS 35.0%
! TGTGAAGGGAAATGATTTTG+AGG + chr3_2:20119853-20119872 Msa0398500:CDS 35.0%
CCAATTAAACGAATGAACCA+AGG - chr3_2:20119957-20119976 None:intergenic 35.0%
CCTTGGTTCATTCGTTTAAT+TGG + chr3_2:20119954-20119973 Msa0398500:CDS 35.0%
!! GGTGATTTTGATCCTAAAGC+TGG + chr3_2:20118716-20118735 Msa0398500:CDS 40.0%
GCCTTAAAATCACCAGCTTT+AGG - chr3_2:20118731-20118750 None:intergenic 40.0%
!!! AGCTGGTGATTTTAAGGCTA+TGG + chr3_2:20118733-20118752 Msa0398500:CDS 40.0%
!!! GATGAGTTGATGGTTTTAGG+TGG + chr3_2:20118758-20118777 Msa0398500:CDS 40.0%
TCCAGAACATGTTTGTAGCT+GGG + chr3_2:20119459-20119478 Msa0398500:intron 40.0%
CAACATCAGTCACCATAGAA+TGG + chr3_2:20119489-20119508 Msa0398500:CDS 40.0%
CAAGAATTGGAGACTGTTGT+CGG + chr3_2:20119560-20119579 Msa0398500:CDS 40.0%
TTTACCACTGCTTGTAGGTA+AGG - chr3_2:20119626-20119645 None:intergenic 40.0%
CAACTTTCAGATGCAATTCG+TGG - chr3_2:20119689-20119708 None:intergenic 40.0%
TTATGGGTACCACATTCCAA+AGG + chr3_2:20119715-20119734 Msa0398500:CDS 40.0%
TATGGGTACCACATTCCAAA+GGG + chr3_2:20119716-20119735 Msa0398500:CDS 40.0%
AATCCTGAAAGGTTCTTACC+AGG + chr3_2:20119809-20119828 Msa0398500:CDS 40.0%
GAACTGTGATGTTGATGTGA+AGG + chr3_2:20119838-20119857 Msa0398500:CDS 40.0%
ATATGTGCGGGTTTGAATCT+AGG + chr3_2:20119902-20119921 Msa0398500:CDS 40.0%
! CCAAGGTAGCAATTTGAAGT+TGG - chr3_2:20119940-20119959 None:intergenic 40.0%
CCAACTTCAAATTGCTACCT+TGG + chr3_2:20119937-20119956 Msa0398500:CDS 40.0%
! GGTTTAGGGTGCACTAATAA+TGG - chr3_2:20120055-20120074 None:intergenic 40.0%
TATTAGTGCACCCTAAACCA+AGG + chr3_2:20120056-20120075 Msa0398500:CDS 40.0%
AAACATGACGAGTACACATG+TGG - chr3_2:20120088-20120107 None:intergenic 40.0%
!! GGTGATTTTGATCCTAAAGC+TGG + chr3_2:20118716-20118735 Msa0398500:CDS 40.0%
GCCTTAAAATCACCAGCTTT+AGG - chr3_2:20118731-20118750 None:intergenic 40.0%
!!! AGCTGGTGATTTTAAGGCTA+TGG + chr3_2:20118733-20118752 Msa0398500:CDS 40.0%
!!! GATGAGTTGATGGTTTTAGG+TGG + chr3_2:20118758-20118777 Msa0398500:CDS 40.0%
TCCAGAACATGTTTGTAGCT+GGG + chr3_2:20119459-20119478 Msa0398500:intron 40.0%
CAACATCAGTCACCATAGAA+TGG + chr3_2:20119489-20119508 Msa0398500:CDS 40.0%
CAAGAATTGGAGACTGTTGT+CGG + chr3_2:20119560-20119579 Msa0398500:CDS 40.0%
TTTACCACTGCTTGTAGGTA+AGG - chr3_2:20119626-20119645 None:intergenic 40.0%
CAACTTTCAGATGCAATTCG+TGG - chr3_2:20119689-20119708 None:intergenic 40.0%
TTATGGGTACCACATTCCAA+AGG + chr3_2:20119715-20119734 Msa0398500:CDS 40.0%
TATGGGTACCACATTCCAAA+GGG + chr3_2:20119716-20119735 Msa0398500:CDS 40.0%
AATCCTGAAAGGTTCTTACC+AGG + chr3_2:20119809-20119828 Msa0398500:CDS 40.0%
GAACTGTGATGTTGATGTGA+AGG + chr3_2:20119838-20119857 Msa0398500:CDS 40.0%
ATATGTGCGGGTTTGAATCT+AGG + chr3_2:20119902-20119921 Msa0398500:CDS 40.0%
! CCAAGGTAGCAATTTGAAGT+TGG - chr3_2:20119940-20119959 None:intergenic 40.0%
CCAACTTCAAATTGCTACCT+TGG + chr3_2:20119937-20119956 Msa0398500:CDS 40.0%
! GGTTTAGGGTGCACTAATAA+TGG - chr3_2:20120055-20120074 None:intergenic 40.0%
TATTAGTGCACCCTAAACCA+AGG + chr3_2:20120056-20120075 Msa0398500:CDS 40.0%
AAACATGACGAGTACACATG+TGG - chr3_2:20120088-20120107 None:intergenic 40.0%
TCAGGAAGAGGTAGCAAGAT+TGG + chr3_2:20118568-20118587 Msa0398500:CDS 45.0%
!! GGCTATGGTTGATGAGTTGA+TGG + chr3_2:20118748-20118767 Msa0398500:CDS 45.0%
AGGTCTAGCCATTCCAATGA+TGG - chr3_2:20118809-20118828 None:intergenic 45.0%
TTGGAATGGCTAGACCTTCA+AGG + chr3_2:20118812-20118831 Msa0398500:CDS 45.0%
GTCCAGAACATGTTTGTAGC+TGG + chr3_2:20119458-20119477 Msa0398500:intron 45.0%
TCCCAGCTACAAACATGTTC+TGG - chr3_2:20119463-20119482 None:intergenic 45.0%
TTCTGCAATGGCCCATTCTA+TGG - chr3_2:20119504-20119523 None:intergenic 45.0%
ATTCCGGAGCAATTCTGCAA+TGG - chr3_2:20119516-20119535 None:intergenic 45.0%
AGACAGGAACGTGAAAGATG+AGG + chr3_2:20119586-20119605 Msa0398500:CDS 45.0%
GCTTGTAGGTAAGGTAGCTT+AGG - chr3_2:20119617-20119636 None:intergenic 45.0%
TTCAGATGCAATTCGTGGGA+GGG - chr3_2:20119684-20119703 None:intergenic 45.0%
TTTCAGATGCAATTCGTGGG+AGG - chr3_2:20119685-20119704 None:intergenic 45.0%
! TCCAAAGGGTTCGACTCTTT+TGG + chr3_2:20119730-20119749 Msa0398500:CDS 45.0%
ACCAAAAGAGTCGAACCCTT+TGG - chr3_2:20119734-20119753 None:intergenic 45.0%
! ATGGATCAGCCCATTTTCCT+GGG - chr3_2:20119781-20119800 None:intergenic 45.0%
! AATGGATCAGCCCATTTTCC+TGG - chr3_2:20119782-20119801 None:intergenic 45.0%
!! GAGGTTATACCTTTTGGTGC+TGG + chr3_2:20119872-20119891 Msa0398500:CDS 45.0%
ATTCTACGTCCAGCACCAAA+AGG - chr3_2:20119884-20119903 None:intergenic 45.0%
TGCTGGACGTAGAATATGTG+CGG + chr3_2:20119889-20119908 Msa0398500:CDS 45.0%
! ATGGATGAAGCTTTTGGCCT+AGG + chr3_2:20120013-20120032 Msa0398500:CDS 45.0%
GCACAGCTCTCATAATACCT+AGG - chr3_2:20120033-20120052 None:intergenic 45.0%
TCAGGAAGAGGTAGCAAGAT+TGG + chr3_2:20118568-20118587 Msa0398500:CDS 45.0%
!! GGCTATGGTTGATGAGTTGA+TGG + chr3_2:20118748-20118767 Msa0398500:CDS 45.0%
AGGTCTAGCCATTCCAATGA+TGG - chr3_2:20118809-20118828 None:intergenic 45.0%
TTGGAATGGCTAGACCTTCA+AGG + chr3_2:20118812-20118831 Msa0398500:CDS 45.0%
GTCCAGAACATGTTTGTAGC+TGG + chr3_2:20119458-20119477 Msa0398500:intron 45.0%
TCCCAGCTACAAACATGTTC+TGG - chr3_2:20119463-20119482 None:intergenic 45.0%
TTCTGCAATGGCCCATTCTA+TGG - chr3_2:20119504-20119523 None:intergenic 45.0%
ATTCCGGAGCAATTCTGCAA+TGG - chr3_2:20119516-20119535 None:intergenic 45.0%
AGACAGGAACGTGAAAGATG+AGG + chr3_2:20119586-20119605 Msa0398500:CDS 45.0%
GCTTGTAGGTAAGGTAGCTT+AGG - chr3_2:20119617-20119636 None:intergenic 45.0%
TTCAGATGCAATTCGTGGGA+GGG - chr3_2:20119684-20119703 None:intergenic 45.0%
TTTCAGATGCAATTCGTGGG+AGG - chr3_2:20119685-20119704 None:intergenic 45.0%
! TCCAAAGGGTTCGACTCTTT+TGG + chr3_2:20119730-20119749 Msa0398500:CDS 45.0%
ACCAAAAGAGTCGAACCCTT+TGG - chr3_2:20119734-20119753 None:intergenic 45.0%
! ATGGATCAGCCCATTTTCCT+GGG - chr3_2:20119781-20119800 None:intergenic 45.0%
! AATGGATCAGCCCATTTTCC+TGG - chr3_2:20119782-20119801 None:intergenic 45.0%
!! GAGGTTATACCTTTTGGTGC+TGG + chr3_2:20119872-20119891 Msa0398500:CDS 45.0%
ATTCTACGTCCAGCACCAAA+AGG - chr3_2:20119884-20119903 None:intergenic 45.0%
TGCTGGACGTAGAATATGTG+CGG + chr3_2:20119889-20119908 Msa0398500:CDS 45.0%
! ATGGATGAAGCTTTTGGCCT+AGG + chr3_2:20120013-20120032 Msa0398500:CDS 45.0%
GCACAGCTCTCATAATACCT+AGG - chr3_2:20120033-20120052 None:intergenic 45.0%
!!! ATATGTTTTATTATAAAATT+TGG - chr3_2:20119416-20119435 None:intergenic 5.0%
!!! ATATGTTTTATTATAAAATT+TGG - chr3_2:20119416-20119435 None:intergenic 5.0%
TACCACCAATGCACTTGCCA+GGG + chr3_2:20118658-20118677 Msa0398500:CDS 50.0%
! AGACTGTTGTCGGACTAGAC+AGG + chr3_2:20119570-20119589 Msa0398500:CDS 50.0%
GCTACCTTACCTACAAGCAG+TGG + chr3_2:20119619-20119638 Msa0398500:CDS 50.0%
!! GGAGGGAAAGAGGTGTTGAT+GGG - chr3_2:20119667-20119686 None:intergenic 50.0%
!! GAGTCGAACCCTTTGGAATG+TGG - chr3_2:20119727-20119746 None:intergenic 50.0%
! TTTTCCTGGGTCACGAGCTA+TGG - chr3_2:20119768-20119787 None:intergenic 50.0%
TAGCTCGTGACCCAGGAAAA+TGG + chr3_2:20119768-20119787 Msa0398500:CDS 50.0%
AGCTCGTGACCCAGGAAAAT+GGG + chr3_2:20119769-20119788 Msa0398500:CDS 50.0%
CCACCTGGTAAGAACCTTTC+AGG - chr3_2:20119815-20119834 None:intergenic 50.0%
CCTGAAAGGTTCTTACCAGG+TGG + chr3_2:20119812-20119831 Msa0398500:CDS 50.0%
ACATCACAGTTCTCACCACC+TGG - chr3_2:20119830-20119849 None:intergenic 50.0%
GCTGGACGTAGAATATGTGC+GGG + chr3_2:20119890-20119909 Msa0398500:CDS 50.0%
GTGGCAAGAGCCTTGGTTTA+GGG - chr3_2:20120069-20120088 None:intergenic 50.0%
TGTGGCAAGAGCCTTGGTTT+AGG - chr3_2:20120070-20120089 None:intergenic 50.0%
TACACATGTGGCAAGAGCCT+TGG - chr3_2:20120076-20120095 None:intergenic 50.0%
TACCACCAATGCACTTGCCA+GGG + chr3_2:20118658-20118677 Msa0398500:CDS 50.0%
! AGACTGTTGTCGGACTAGAC+AGG + chr3_2:20119570-20119589 Msa0398500:CDS 50.0%
GCTACCTTACCTACAAGCAG+TGG + chr3_2:20119619-20119638 Msa0398500:CDS 50.0%
!! GGAGGGAAAGAGGTGTTGAT+GGG - chr3_2:20119667-20119686 None:intergenic 50.0%
!! GAGTCGAACCCTTTGGAATG+TGG - chr3_2:20119727-20119746 None:intergenic 50.0%
! TTTTCCTGGGTCACGAGCTA+TGG - chr3_2:20119768-20119787 None:intergenic 50.0%
TAGCTCGTGACCCAGGAAAA+TGG + chr3_2:20119768-20119787 Msa0398500:CDS 50.0%
AGCTCGTGACCCAGGAAAAT+GGG + chr3_2:20119769-20119788 Msa0398500:CDS 50.0%
CCACCTGGTAAGAACCTTTC+AGG - chr3_2:20119815-20119834 None:intergenic 50.0%
CCTGAAAGGTTCTTACCAGG+TGG + chr3_2:20119812-20119831 Msa0398500:CDS 50.0%
ACATCACAGTTCTCACCACC+TGG - chr3_2:20119830-20119849 None:intergenic 50.0%
GCTGGACGTAGAATATGTGC+GGG + chr3_2:20119890-20119909 Msa0398500:CDS 50.0%
GTGGCAAGAGCCTTGGTTTA+GGG - chr3_2:20120069-20120088 None:intergenic 50.0%
TGTGGCAAGAGCCTTGGTTT+AGG - chr3_2:20120070-20120089 None:intergenic 50.0%
TACACATGTGGCAAGAGCCT+TGG - chr3_2:20120076-20120095 None:intergenic 50.0%
GTACCACCAATGCACTTGCC+AGG + chr3_2:20118657-20118676 Msa0398500:CDS 55.0%
TTGCCAGGGCTGTGATAGGA+AGG + chr3_2:20118672-20118691 Msa0398500:CDS 55.0%
TCTCCTTCCTATCACAGCCC+TGG - chr3_2:20118678-20118697 None:intergenic 55.0%
GGGCCATTGCAGAATTGCTC+CGG + chr3_2:20119510-20119529 Msa0398500:CDS 55.0%
!! GGGAGGGAAAGAGGTGTTGA+TGG - chr3_2:20119668-20119687 None:intergenic 55.0%
GCAATTCGTGGGAGGGAAAG+AGG - chr3_2:20119677-20119696 None:intergenic 55.0%
GTACCACCAATGCACTTGCC+AGG + chr3_2:20118657-20118676 Msa0398500:CDS 55.0%
TTGCCAGGGCTGTGATAGGA+AGG + chr3_2:20118672-20118691 Msa0398500:CDS 55.0%
TCTCCTTCCTATCACAGCCC+TGG - chr3_2:20118678-20118697 None:intergenic 55.0%
GGGCCATTGCAGAATTGCTC+CGG + chr3_2:20119510-20119529 Msa0398500:CDS 55.0%
!! GGGAGGGAAAGAGGTGTTGA+TGG - chr3_2:20119668-20119687 None:intergenic 55.0%
GCAATTCGTGGGAGGGAAAG+AGG - chr3_2:20119677-20119696 None:intergenic 55.0%
AGCCCTGGCAAGTGCATTGG+TGG - chr3_2:20118663-20118682 None:intergenic 60.0%
CACAGCCCTGGCAAGTGCAT+TGG - chr3_2:20118666-20118685 None:intergenic 60.0%
GCACTTGCCAGGGCTGTGAT+AGG + chr3_2:20118668-20118687 Msa0398500:CDS 60.0%
AGCCCTGGCAAGTGCATTGG+TGG - chr3_2:20118663-20118682 None:intergenic 60.0%
CACAGCCCTGGCAAGTGCAT+TGG - chr3_2:20118666-20118685 None:intergenic 60.0%
GCACTTGCCAGGGCTGTGAT+AGG + chr3_2:20118668-20118687 Msa0398500:CDS 60.0%
TGGGCCATAGCTCGTGACCC+AGG + chr3_2:20119761-20119780 Msa0398500:CDS 65.0%
TGGGCCATAGCTCGTGACCC+AGG + chr3_2:20119761-20119780 Msa0398500:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 20118548 20120111 20118548 ID=Msa0398500;Name=Msa0398500
chr3_2 mRNA 20118548 20120111 20118548 ID=Msa0398500-mRNA-1;Parent=Msa0398500;Name=Msa0398500-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|375
chr3_2 exon 20118548 20119027 20118548 ID=Msa0398500-mRNA-1:exon:4350;Parent=Msa0398500-mRNA-1
chr3_2 exon 20119464 20120111 20119464 ID=Msa0398500-mRNA-1:exon:4351;Parent=Msa0398500-mRNA-1
chr3_2 CDS 20118548 20119027 20118548 ID=Msa0398500-mRNA-1:cds;Parent=Msa0398500-mRNA-1
chr3_2 CDS 20119464 20120111 20119464 ID=Msa0398500-mRNA-1:cds;Parent=Msa0398500-mRNA-1
Gene Sequence

>Msa0398500

CAACCTAATCAATTGCATTTTCAGGAAGAGGTAGCAAGATTGGTCAACAATTTGGCAAGTAATCATTCAAACTCAAAAGTTGTGAACTTAGGACAACTATTAAATGTATGTACCACCAATGCACTTGCCAGGGCTGTGATAGGAAGGAGAGTATTTAATGAAGGAAATGGTGATTTTGATCCTAAAGCTGGTGATTTTAAGGCTATGGTTGATGAGTTGATGGTTTTAGGTGGAGTTTTCAACATTGGTGATTTTATTCCATCATTGGAATGGCTAGACCTTCAAGGACTTCAAGCTAAAATGAAGAAATTACACAAGAGGTTTGATGCATTTATAACAAACATTATTGAGGAACATAAGACTTCTATTTCTAAGAGTGAGAAACATAAGGATTTGTTAAGCACATTATTGTCACTTAAAGAGGAAACAGATGAAGATGGAAACAAACTCACTGATATTGAGATCAAAGGACTACTTATGAACATGTTTGTAGCTGGGACAGAGACAACATCAGTCACCATAGAATGGGCCATTGCAGAATTGCTCCGGAATCAAAAAATCCTAACCAAAGTTCAACAAGAATTGGAGACTGTTGTCGGACTAGACAGGAACGTGAAAGATGAGGATTTACCTAAGCTACCTTACCTACAAGCAGTGGTAAAAGAAACATTTCGCTTGCACCCATCAACACCTCTTTCCCTCCCACGAATTGCATCTGAAAGTTGTGAGGTTTATGGGTACCACATTCCAAAGGGTTCGACTCTTTTGGTAAATGTATGGGCCATAGCTCGTGACCCAGGAAAATGGGCTGATCCATTAATGTTTAATCCTGAAAGGTTCTTACCAGGTGGTGAGAACTGTGATGTTGATGTGAAGGGAAATGATTTTGAGGTTATACCTTTTGGTGCTGGACGTAGAATATGTGCGGGTTTGAATCTAGGAATTCGAATGGTCCAACTTCAAATTGCTACCTTGGTTCATTCGTTTAATTGGGAGCTTGAAAATGGACTAAATGCAAAAGACATAAACATGGATGAAGCTTTTGGCCTAGGTATTATGAGAGCTGTGCCATTATTAGTGCACCCTAAACCAAGGCTCTTGCCACATGTGTACTCGTCATGTTTATGA

Protein sequence

>Msa0398500

QPNQLHFQEEVARLVNNLASNHSNSKVVNLGQLLNVCTTNALARAVIGRRVFNEGNGDFDPKAGDFKAMVDELMVLGGVFNIGDFIPSLEWLDLQGLQAKMKKLHKRFDAFITNIIEEHKTSISKSEKHKDLLSTLLSLKEETDEDGNKLTDIEIKGLLMNMFVAGTETTSVTIEWAIAELLRNQKILTKVQQELETVVGLDRNVKDEDLPKLPYLQAVVKETFRLHPSTPLSLPRIASESCEVYGYHIPKGSTLLVNVWAIARDPGKWADPLMFNPERFLPGGENCDVDVKGNDFEVIPFGAGRRICAGLNLGIRMVQLQIATLVHSFNWELENGLNAKDINMDEAFGLGIMRAVPLLVHPKPRLLPHVYSSCL*