AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0174560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174560 MtrunA17_Chr1g0194951 96.505 372 10 3 1 370 1 371 0.0 723
Msa0174560 MtrunA17_Chr7g0269831 46.457 381 165 10 1 368 1 355 2.13e-94 286
Msa0174560 MtrunA17_Chr4g0068061 60.894 179 56 3 1 174 1 170 3.48e-71 226
Msa0174560 MtrunA17_Chr7g0275911 68.852 122 38 0 1 122 1 122 8.71e-61 196
Msa0174560 MtrunA17_Chr8g0346561 68.966 116 36 0 1 116 1 116 3.67e-58 191
Msa0174560 MtrunA17_Chr4g0070641 65.323 124 43 0 1 124 1 124 1.32e-56 182
Msa0174560 MtrunA17_Chr1g0187761 64.662 133 44 1 1 130 1 133 1.48e-56 185
Msa0174560 MtrunA17_Chr4g0070611 65.323 124 43 0 1 124 1 124 2.38e-56 186
Msa0174560 MtrunA17_Chr3g0131121 69.492 118 36 0 1 118 1 118 2.73e-56 186
Msa0174560 MtrunA17_Chr3g0121241 65.600 125 38 1 5 129 35 154 2.94e-55 183
Msa0174560 MtrunA17_Chr7g0217741 61.481 135 52 0 1 135 1 135 4.69e-55 183
Msa0174560 MtrunA17_Chr1g0167661 68.103 116 37 0 1 116 1 116 6.18e-55 181
Msa0174560 MtrunA17_Chr1g0167691 66.379 116 39 0 1 116 1 116 2.16e-54 179
Msa0174560 MtrunA17_Chr4g0042671 63.566 129 47 0 1 129 1 129 2.45e-54 184
Msa0174560 MtrunA17_Chr1g0203411 66.379 116 39 0 1 116 1 116 3.44e-54 180
Msa0174560 MtrunA17_Chr7g0261281 66.379 116 39 0 1 116 1 116 4.61e-54 179
Msa0174560 MtrunA17_Chr7g0274581 62.931 116 43 0 1 116 1 116 6.20e-54 177
Msa0174560 MtrunA17_Chr4g0037141 67.241 116 38 0 1 116 1 116 6.73e-54 179
Msa0174560 MtrunA17_Chr3g0115821 61.240 129 50 0 1 129 1 129 6.75e-54 181
Msa0174560 MtrunA17_Chr2g0281071 63.077 130 47 1 1 129 1 130 1.03e-53 181
Msa0174560 MtrunA17_Chr6g0453471 62.016 129 49 0 1 129 1 129 1.47e-53 181
Msa0174560 MtrunA17_Chr4g0039971 60.769 130 51 0 1 130 2 131 1.59e-53 180
Msa0174560 MtrunA17_Chr3g0110351 67.241 116 38 0 1 116 1 116 3.45e-53 178
Msa0174560 MtrunA17_Chr2g0323411 59.231 130 53 0 1 130 1 130 5.20e-53 178
Msa0174560 MtrunA17_Chr8g0385321 63.281 128 47 0 1 128 1 128 6.26e-53 177
Msa0174560 MtrunA17_Chr5g0434571 62.500 128 48 0 1 128 37 164 6.27e-53 179
Msa0174560 MtrunA17_Chr7g0228891 68.103 116 37 0 1 116 1 116 1.25e-52 176
Msa0174560 MtrunA17_Chr4g0048511 61.832 131 49 1 1 130 1 131 2.03e-52 177
Msa0174560 MtrunA17_Chr8g0349261 62.308 130 47 2 1 128 1 130 4.18e-52 175
Msa0174560 MtrunA17_Chr3g0103281 57.042 142 47 1 1 128 1 142 4.24e-52 176
Msa0174560 MtrunA17_Chr4g0057031 59.375 128 52 0 1 128 1 128 2.25e-50 169
Msa0174560 MtrunA17_Chr4g0060721 63.793 116 42 0 1 116 2 117 5.58e-50 171
Msa0174560 MtrunA17_Chr5g0435101 60.684 117 46 0 3 119 2 118 3.09e-49 165
Msa0174560 MtrunA17_Chr7g0254411 60.504 119 47 0 1 119 1 119 9.76e-49 167
Msa0174560 MtrunA17_Chr5g0395281 57.364 129 55 0 1 129 1 129 2.97e-48 165
Msa0174560 MtrunA17_Chr2g0311221 65.455 110 38 0 2 111 4 113 4.02e-48 166
Msa0174560 MtrunA17_Chr5g0410961 55.814 129 57 0 1 129 1 129 1.04e-47 165
Msa0174560 MtrunA17_Chr2g0330041 56.204 137 59 1 1 137 1 136 1.98e-47 166
Msa0174560 MtrunA17_Chr3g0092401 60.345 116 46 0 1 116 2 117 2.09e-47 163
Msa0174560 MtrunA17_Chr7g0217221 60.345 116 46 0 1 116 1 116 4.54e-47 161
Msa0174560 MtrunA17_Chr8g0342541 59.398 133 45 1 1 124 1 133 6.31e-47 163
Msa0174560 MtrunA17_Chr8g0342521 62.097 124 47 0 1 124 1 124 7.17e-47 163
Msa0174560 MtrunA17_Chr1g0193371 63.793 116 42 0 1 116 1 116 4.13e-46 161
Msa0174560 MtrunA17_Chr2g0294811 75.000 92 23 0 1 92 1 92 4.57e-46 153
Msa0174560 MtrunA17_Chr4g0058631 60.156 128 51 0 1 128 1 128 5.40e-46 160
Msa0174560 MtrunA17_Chr3g0117091 57.895 133 56 0 1 133 1 133 1.03e-45 160
Msa0174560 MtrunA17_Chr8g0342481 51.316 152 71 2 1 151 1 150 1.05e-45 161
Msa0174560 MtrunA17_Chr1g0193801 62.931 116 43 0 1 116 1 116 1.61e-45 160
Msa0174560 MtrunA17_Chr7g0270891 62.931 116 43 0 1 116 1 116 2.35e-45 159
Msa0174560 MtrunA17_Chr2g0323351 59.483 116 47 0 1 116 1 116 4.88e-45 155
Msa0174560 MtrunA17_Chr1g0211161 58.594 128 53 0 3 130 4 131 6.87e-45 154
Msa0174560 MtrunA17_Chr7g0271241 66.055 109 37 0 1 109 1 109 2.31e-44 157
Msa0174560 MtrunA17_Chr6g0453211 59.459 111 45 0 1 111 1 111 2.73e-44 155
Msa0174560 MtrunA17_Chr8g0387421 59.483 116 47 0 1 116 1 116 2.78e-44 155
Msa0174560 MtrunA17_Chr4g0022891 59.821 112 45 0 1 112 1 112 6.79e-44 152
Msa0174560 MtrunA17_Chr2g0309911 53.676 136 55 2 6 138 5 135 6.85e-44 154
Msa0174560 MtrunA17_Chr5g0397231 60.909 110 43 0 1 110 1 110 1.20e-43 154
Msa0174560 MtrunA17_Chr1g0151941 54.622 119 53 1 1 118 1 119 2.69e-43 150
Msa0174560 MtrunA17_Chr4g0022881 57.025 121 48 1 1 121 1 117 2.93e-43 150
Msa0174560 MtrunA17_Chr4g0022901 56.897 116 49 1 1 115 1 116 3.03e-43 151
Msa0174560 MtrunA17_Chr4g0022931 55.556 117 51 1 1 116 1 117 3.10e-43 151
Msa0174560 MtrunA17_Chr4g0055981 62.500 104 39 0 12 115 55 158 3.28e-43 150
Msa0174560 MtrunA17_Chr4g0022911 55.172 116 51 1 1 115 1 116 4.10e-43 151
Msa0174560 MtrunA17_Chr8g0343831 60.952 105 41 0 12 116 8 112 4.97e-43 150
Msa0174560 MtrunA17_Chr5g0400821 55.556 117 51 1 1 116 1 117 7.60e-43 151
Msa0174560 MtrunA17_Chr4g0044421 55.906 127 50 2 3 128 2 123 1.17e-42 147
Msa0174560 MtrunA17_Chr6g0487491 53.676 136 53 3 1 126 1 136 1.27e-42 149
Msa0174560 MtrunA17_Chr6g0452271 51.562 128 62 0 1 128 1 128 5.13e-42 149
Msa0174560 MtrunA17_Chr3g0135311 54.237 118 53 1 1 117 1 118 9.59e-42 149
Msa0174560 MtrunA17_Chr4g0028311 56.410 117 50 1 1 116 1 117 1.61e-41 148
Msa0174560 MtrunA17_Chr1g0152011 54.701 117 52 1 1 116 1 117 2.15e-41 148
Msa0174560 MtrunA17_Chr4g0054391 59.091 110 44 1 1 109 1 110 2.40e-41 147
Msa0174560 MtrunA17_Chr7g0264641 51.538 130 61 2 1 129 1 129 3.35e-41 145
Msa0174560 MtrunA17_Chr2g0328771 58.120 117 48 1 12 128 20 135 4.05e-41 147
Msa0174560 MtrunA17_Chr3g0088461 60.185 108 43 0 9 116 19 126 1.16e-40 146
Msa0174560 MtrunA17_Chr4g0032401 59.633 109 44 0 12 120 17 125 2.09e-40 145
Msa0174560 MtrunA17_Chr1g0194291 58.879 107 44 0 9 115 18 124 3.32e-40 143
Msa0174560 MtrunA17_Chr7g0228231 60.000 105 42 0 12 116 14 118 3.57e-40 141
Msa0174560 MtrunA17_Chr4g0072751 54.955 111 49 1 1 110 1 111 4.07e-40 145
Msa0174560 MtrunA17_Chr2g0327351 56.757 111 47 1 1 110 1 111 6.37e-40 144
Msa0174560 MtrunA17_Chr6g0450101 55.932 118 50 1 1 116 1 118 8.47e-40 140
Msa0174560 MtrunA17_Chr1g0203441 57.265 117 49 1 1 116 1 117 1.88e-39 141
Msa0174560 MtrunA17_Chr1g0209661 59.615 104 42 0 12 115 27 130 1.89e-39 142
Msa0174560 MtrunA17_Chr7g0240821 46.575 146 76 1 17 160 6 151 1.94e-39 140
Msa0174560 MtrunA17_Chr1g0186061 59.223 103 42 0 13 115 21 123 2.17e-39 140
Msa0174560 MtrunA17_Chr1g0168661 59.223 103 42 0 13 115 22 124 8.47e-39 139
Msa0174560 MtrunA17_Chr8g0354661 57.547 106 45 0 10 115 35 140 8.52e-39 145
Msa0174560 MtrunA17_Chr5g0417821 52.500 120 57 0 10 129 5 124 2.48e-38 139
Msa0174560 MtrunA17_Chr3g0080861 39.691 194 100 4 10 190 35 224 8.82e-38 142
Msa0174560 MtrunA17_Chr6g0470971 57.798 109 46 0 7 115 9 117 1.68e-37 136
Msa0174560 MtrunA17_Chr7g0220341 36.453 203 112 4 10 197 23 223 1.71e-37 136
Msa0174560 MtrunA17_Chr4g0042611 65.909 88 30 0 1 88 1 88 8.70e-37 128
Msa0174560 MtrunA17_Chr3g0099131 56.604 106 46 0 10 115 39 144 1.58e-36 139
Msa0174560 MtrunA17_Chr1g0194301 55.769 104 46 0 12 115 33 136 2.19e-36 133
Msa0174560 MtrunA17_Chr5g0434911 50.893 112 55 0 7 118 16 127 1.38e-35 131
Msa0174560 MtrunA17_Chr2g0322521 55.140 107 48 0 9 115 26 132 1.57e-35 134
Msa0174560 MtrunA17_Chr1g0154031 56.731 104 45 0 12 115 76 179 2.57e-35 134
Msa0174560 MtrunA17_Chr5g0434931 51.852 108 52 0 11 118 34 141 2.81e-35 130
Msa0174560 MtrunA17_Chr4g0068921 58.252 103 43 0 12 114 24 126 7.51e-35 127
Msa0174560 MtrunA17_Chr5g0434831 53.774 106 49 0 11 116 6 111 1.16e-34 126
Msa0174560 MtrunA17_Chr1g0180391 47.692 130 60 1 12 133 19 148 5.79e-34 125
Msa0174560 MtrunA17_Chr7g0228991 34.872 195 116 3 11 194 28 222 1.52e-33 125
Msa0174560 MtrunA17_Chr2g0293911 55.140 107 48 0 8 114 20 126 1.95e-33 127
Msa0174560 MtrunA17_Chr8g0360111 52.427 103 49 0 11 113 24 126 3.21e-33 124
Msa0174560 MtrunA17_Chr1g0192411 54.000 100 46 0 10 109 10 109 2.30e-32 125
Msa0174560 MtrunA17_Chr5g0434841 50.000 106 53 0 11 116 19 124 9.11e-32 122
Msa0174560 MtrunA17_Chr5g0440781 37.222 180 90 7 13 190 13 171 1.16e-31 118
Msa0174560 MtrunA17_Chr4g0030881 49.091 110 49 1 13 115 8 117 3.07e-31 119
Msa0174560 MtrunA17_Chr8g0342511 62.069 87 33 0 1 87 1 87 3.61e-31 114
Msa0174560 MtrunA17_Chr5g0440761 46.218 119 60 3 13 128 13 130 3.71e-31 119
Msa0174560 MtrunA17_Chr5g0441141 46.218 119 60 3 13 128 13 130 5.52e-31 119
Msa0174560 MtrunA17_Chr7g0247131 55.208 96 43 0 44 139 10 105 6.51e-31 118
Msa0174560 MtrunA17_Chr8g0342531 47.200 125 61 1 1 120 1 125 7.64e-31 115
Msa0174560 MtrunA17_Chr2g0327821 49.038 104 53 0 12 115 6 109 1.02e-30 117
Msa0174560 MtrunA17_Chr2g0323321 57.609 92 38 1 1 92 1 91 9.04e-30 110
Msa0174560 MtrunA17_Chr5g0441131 48.039 102 52 1 10 110 7 108 2.56e-28 109
Msa0174560 MtrunA17_Chr8g0342461 56.667 90 38 1 1 89 1 90 4.49e-28 107
Msa0174560 MtrunA17_Chr8g0342471 56.667 90 38 1 1 89 1 90 5.82e-28 107
Msa0174560 MtrunA17_Chr5g0395221 55.682 88 39 0 1 88 1 88 6.80e-28 105
Msa0174560 MtrunA17_Chr3g0099141 55.422 83 37 0 12 94 40 122 2.72e-27 105
Msa0174560 MtrunA17_Chr8g0334881 46.154 104 55 1 12 114 10 113 1.14e-26 108
Msa0174560 MtrunA17_Chr4g0013361 45.370 108 58 1 8 114 6 113 1.59e-26 107
Msa0174560 MtrunA17_Chr3g0133601 49.020 102 51 1 14 115 37 137 9.06e-26 103
Msa0174560 MtrunA17_Chr4g0053431 48.113 106 54 1 14 119 5 109 7.38e-25 102
Msa0174560 MtrunA17_Chr5g0401731 45.455 110 51 2 14 119 15 119 1.09e-24 102
Msa0174560 MtrunA17_Chr4g0008551 48.544 103 50 2 14 115 38 138 7.25e-24 100
Msa0174560 MtrunA17_Chr6g0454921 43.396 106 59 1 14 119 15 119 1.97e-23 96.7
Msa0174560 MtrunA17_Chr6g0480581 41.441 111 58 2 14 118 4 113 3.07e-23 97.1
Msa0174560 MtrunA17_Chr5g0425591 48.235 85 43 1 10 93 7 91 7.86e-23 91.7
Msa0174560 MtrunA17_Chr7g0229101 59.420 69 28 0 44 112 4 72 1.24e-22 94.7
Msa0174560 MtrunA17_Chr3g0117511 36.420 162 90 4 8 159 177 335 2.09e-22 98.2
Msa0174560 MtrunA17_Chr5g0429661 46.667 105 53 2 12 115 120 222 1.70e-21 94.4
Msa0174560 MtrunA17_Chr7g0229131 48.193 83 43 0 45 127 5 87 2.83e-21 89.7
Msa0174560 MtrunA17_Chr5g0437321 45.455 99 53 1 14 112 19 116 3.31e-21 92.4
Msa0174560 MtrunA17_Chr4g0058991 42.857 112 60 3 8 118 203 311 5.06e-21 94.0
Msa0174560 MtrunA17_Chr4g0042501 43.689 103 55 2 14 115 105 205 1.59e-20 92.4
Msa0174560 MtrunA17_Chr3g0093811 50.000 84 39 1 36 116 3 86 2.99e-20 89.4
Msa0174560 MtrunA17_Chr5g0417621 42.308 104 57 2 14 116 134 235 3.82e-20 91.3
Msa0174560 MtrunA17_Chr6g0460661 38.235 102 62 1 14 115 16 116 4.20e-20 86.3
Msa0174560 MtrunA17_Chr5g0434901 55.385 65 29 0 48 112 9 73 4.42e-20 84.7
Msa0174560 MtrunA17_Chr7g0238631 39.844 128 66 3 12 135 111 231 5.53e-20 91.7
Msa0174560 MtrunA17_Chr3g0139671 38.889 108 65 1 12 119 83 189 1.12e-19 90.9
Msa0174560 MtrunA17_Chr3g0139671 36.538 104 64 2 14 116 33 135 3.90e-12 67.8
Msa0174560 MtrunA17_Chr1g0157731 37.037 108 67 1 12 119 89 195 2.35e-19 90.1
Msa0174560 MtrunA17_Chr1g0157731 35.577 104 65 2 14 116 39 141 3.10e-12 68.2
Msa0174560 MtrunA17_Chr3g0125801 41.818 110 61 2 14 122 16 123 5.17e-19 86.3
Msa0174560 MtrunA17_Chr6g0460671 41.176 102 59 1 14 115 99 199 1.06e-18 86.3
Msa0174560 MtrunA17_Chr6g0453751 44.565 92 42 2 11 93 19 110 1.57e-18 81.3
Msa0174560 MtrunA17_Chr7g0247141 68.750 48 14 1 1 47 1 48 2.45e-17 75.5
Msa0174560 MtrunA17_Chr7g0254261 39.806 103 59 2 14 115 89 189 4.59e-17 81.6
Msa0174560 MtrunA17_Chr5g0397841 42.857 98 55 1 12 109 108 204 1.03e-16 81.3
Msa0174560 MtrunA17_Chr7g0228531 38.679 106 63 2 10 115 216 319 1.53e-16 80.5
Msa0174560 MtrunA17_Chr7g0238651 37.113 97 59 1 14 108 7 103 4.16e-16 79.0
Msa0174560 MtrunA17_Chr1g0193901 46.429 84 43 2 12 93 11 94 3.70e-15 71.2
Msa0174560 MtrunA17_Chr1g0193891 46.429 84 43 2 12 93 11 94 3.70e-15 71.2
Msa0174560 MtrunA17_Chr1g0193871 46.429 84 43 2 12 93 11 94 3.70e-15 71.2
Msa0174560 MtrunA17_Chr1g0193881 46.429 84 43 2 12 93 11 94 3.70e-15 71.2
Msa0174560 MtrunA17_Chr7g0228481 38.614 101 60 2 10 110 216 314 4.22e-15 76.3
Msa0174560 MtrunA17_Chr1g0177901 42.529 87 49 1 24 110 4 89 6.80e-15 73.2
Msa0174560 MtrunA17_Chr7g0228401 50.794 63 31 0 48 110 312 374 2.28e-14 74.3
Msa0174560 MtrunA17_Chr7g0233061 35.922 103 51 3 14 110 180 273 3.61e-14 73.2
Msa0174560 MtrunA17_Chr5g0416341 36.170 94 59 1 17 110 29 121 2.42e-13 70.9
Msa0174560 MtrunA17_Chr5g0434871 55.556 45 20 0 74 118 2 46 1.06e-12 62.8
Msa0174560 MtrunA17_Chr2g0294821 45.679 81 39 2 89 169 5 80 6.28e-12 65.1
Msa0174560 MtrunA17_Chr8g0362231 34.043 94 61 1 17 110 25 117 1.36e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174560 AT2G47460.1 40.050 397 185 13 1 370 1 371 5.01e-74 234
Msa0174560 AT5G49330.1 65.680 169 41 1 1 152 1 169 2.77e-73 231
Msa0174560 AT3G62610.1 39.740 385 175 8 1 370 1 343 9.17e-66 212
Msa0174560 AT3G61250.1 63.281 128 47 0 1 128 1 128 3.09e-56 186
Msa0174560 AT1G35515.1 61.151 139 50 1 1 135 1 139 6.16e-56 182
Msa0174560 AT2G31180.1 68.103 116 37 0 1 116 1 116 8.09e-56 183
Msa0174560 AT4G28110.1 64.655 116 41 0 1 116 1 116 6.23e-55 182
Msa0174560 AT5G15310.4 62.016 129 49 0 1 129 1 129 7.34e-55 181
Msa0174560 AT4G21440.1 44.186 215 101 5 1 205 1 206 7.89e-55 184
Msa0174560 AT1G06180.1 66.667 117 39 0 1 117 1 117 8.90e-55 181
Msa0174560 AT4G38620.1 68.103 116 37 0 1 116 1 116 1.01e-54 182
Msa0174560 AT5G15310.1 62.016 129 49 0 1 129 1 129 1.66e-54 182
Msa0174560 AT2G16720.1 66.949 118 39 0 1 118 1 118 1.78e-54 181
Msa0174560 AT5G15310.2 62.016 129 49 0 1 129 1 129 1.81e-54 182
Msa0174560 AT3G23250.1 57.778 135 57 0 1 135 1 135 4.31e-54 180
Msa0174560 AT3G02940.2 60.465 129 51 0 1 129 1 129 7.10e-54 180
Msa0174560 AT4G09460.1 66.949 118 39 0 1 118 1 118 1.07e-53 177
Msa0174560 AT3G02940.1 60.465 129 51 0 1 129 1 129 1.21e-53 180
Msa0174560 AT3G02940.3 60.465 129 51 0 1 129 1 129 1.21e-53 180
Msa0174560 AT1G16490.1 66.667 117 39 0 2 118 4 120 1.57e-53 178
Msa0174560 AT5G16600.1 63.281 128 47 0 1 128 1 128 1.70e-53 180
Msa0174560 AT3G01140.2 66.379 116 39 0 1 116 1 116 2.55e-53 180
Msa0174560 AT3G13540.1 68.142 113 36 0 4 116 15 127 2.66e-53 177
Msa0174560 AT1G22640.1 64.407 118 42 0 1 118 1 118 3.32e-53 177
Msa0174560 AT5G16770.4 60.465 129 51 0 1 129 1 129 1.12e-52 177
Msa0174560 AT5G16770.3 60.465 129 51 0 1 129 1 129 1.12e-52 177
Msa0174560 AT4G34990.1 66.379 116 39 0 1 116 1 116 1.24e-52 176
Msa0174560 AT1G66230.1 61.719 128 49 0 1 128 1 128 1.51e-52 176
Msa0174560 AT4G05100.1 60.000 130 51 1 1 129 1 130 1.77e-52 177
Msa0174560 AT5G16770.1 60.465 129 51 0 1 129 1 129 1.88e-52 177
Msa0174560 AT5G16770.2 60.465 129 51 0 1 129 1 129 1.88e-52 177
Msa0174560 AT4G17785.2 58.824 136 55 1 1 135 1 136 6.05e-52 176
Msa0174560 AT4G17785.1 58.824 136 55 1 1 135 1 136 8.40e-52 176
Msa0174560 AT5G65230.1 58.647 133 55 0 1 133 1 133 1.10e-51 174
Msa0174560 AT1G79180.1 62.992 127 45 1 2 128 4 128 1.46e-51 174
Msa0174560 AT1G34670.1 60.465 129 51 0 1 129 1 129 1.76e-51 176
Msa0174560 AT5G14340.1 61.719 128 49 0 1 128 13 140 8.92e-51 171
Msa0174560 AT3G01140.1 65.487 113 39 0 4 116 47 159 3.30e-50 173
Msa0174560 AT4G22680.1 59.375 128 52 0 1 128 1 128 3.58e-50 169
Msa0174560 AT1G56160.1 65.217 115 40 0 2 116 4 118 1.12e-49 169
Msa0174560 AT3G12820.1 64.912 114 40 0 3 116 5 118 3.54e-49 166
Msa0174560 AT4G12350.1 58.594 128 53 0 1 128 1 128 4.14e-49 167
Msa0174560 AT5G62470.2 62.931 116 43 0 1 116 1 116 4.66e-49 169
Msa0174560 AT1G74650.1 62.069 116 44 0 1 116 1 116 7.46e-49 168
Msa0174560 AT5G60890.1 60.345 116 46 0 1 116 1 116 7.97e-49 167
Msa0174560 AT1G08810.1 61.207 116 45 0 1 116 1 116 1.05e-48 166
Msa0174560 AT5G10280.1 58.140 129 54 0 1 129 1 129 1.27e-48 167
Msa0174560 AT5G56110.1 58.594 128 53 0 1 128 1 128 1.78e-48 166
Msa0174560 AT1G74080.1 63.158 114 42 0 1 114 1 114 2.11e-48 167
Msa0174560 AT5G54230.1 43.902 205 109 2 1 205 1 199 2.26e-48 166
Msa0174560 AT5G07690.1 54.815 135 61 0 1 135 1 135 7.65e-48 165
Msa0174560 AT5G61420.2 60.345 116 46 0 1 116 1 116 9.99e-48 166
Msa0174560 AT5G62470.1 62.931 116 42 1 1 116 1 115 1.24e-47 165
Msa0174560 AT3G47600.1 60.345 116 46 0 1 116 1 116 2.69e-47 164
Msa0174560 AT3G13890.2 61.864 118 45 0 1 118 1 118 8.31e-47 163
Msa0174560 AT3G28910.1 61.207 116 45 0 1 116 1 116 1.39e-46 162
Msa0174560 AT1G18570.1 59.829 117 46 1 1 116 1 117 4.80e-46 161
Msa0174560 AT4G01680.3 63.793 116 42 0 1 116 1 116 5.57e-46 157
Msa0174560 AT5G26660.1 59.091 132 54 0 1 132 1 132 1.11e-45 160
Msa0174560 AT5G07700.1 58.621 116 48 0 1 116 1 116 1.26e-45 159
Msa0174560 AT5G07700.2 58.621 116 48 0 1 116 1 116 1.26e-45 159
Msa0174560 AT1G79180.2 52.027 148 38 1 2 116 4 151 2.36e-45 159
Msa0174560 AT4G01680.1 63.793 116 42 0 1 116 1 116 2.90e-45 159
Msa0174560 AT1G09540.1 63.793 116 42 0 1 116 1 116 3.79e-45 159
Msa0174560 AT1G63910.1 54.135 133 61 0 1 133 1 133 6.64e-45 159
Msa0174560 AT1G57560.1 62.069 116 44 0 1 116 1 116 1.37e-44 156
Msa0174560 AT1G57560.2 62.069 116 44 0 1 116 1 116 1.41e-44 155
Msa0174560 AT4G37780.1 56.303 119 51 1 1 118 1 119 6.76e-44 154
Msa0174560 AT5G35550.1 54.676 139 56 1 12 143 14 152 7.94e-44 152
Msa0174560 AT3G13890.1 57.480 127 45 1 1 118 1 127 8.97e-44 155
Msa0174560 AT3G12720.1 59.292 113 46 0 6 118 16 128 2.49e-43 152
Msa0174560 AT5G40330.1 41.011 178 97 3 13 185 13 187 8.16e-43 149
Msa0174560 AT3G08500.1 62.963 108 40 0 9 116 27 134 1.90e-42 151
Msa0174560 AT5G14750.1 58.654 104 43 0 13 116 17 120 4.04e-42 146
Msa0174560 AT5G12870.1 60.550 109 43 0 12 120 18 126 4.08e-42 149
Msa0174560 AT3G28470.1 58.182 110 46 0 1 110 1 110 4.13e-42 150
Msa0174560 AT3G49690.1 55.556 117 51 1 1 116 1 117 6.35e-42 149
Msa0174560 AT1G74430.1 54.688 128 58 0 1 128 1 128 7.13e-42 148
Msa0174560 AT4G01680.2 57.812 128 42 1 1 116 1 128 7.86e-42 150
Msa0174560 AT5G62320.1 52.239 134 52 2 2 128 3 131 2.04e-41 146
Msa0174560 AT5G23000.1 56.410 117 50 1 1 116 1 117 2.25e-41 148
Msa0174560 AT5G65790.1 54.701 117 52 1 1 116 1 117 4.76e-41 148
Msa0174560 AT2G36890.1 51.163 129 57 2 1 128 1 124 1.08e-40 145
Msa0174560 AT2G36890.2 51.163 129 57 2 1 128 42 165 1.96e-40 146
Msa0174560 AT1G18710.1 48.951 143 71 1 1 141 1 143 2.74e-40 144
Msa0174560 AT5G40350.1 57.018 114 49 0 12 125 17 130 5.04e-40 141
Msa0174560 AT5G52600.1 57.009 107 46 0 9 115 9 115 7.08e-40 140
Msa0174560 AT2G32460.1 56.250 112 49 0 4 115 10 121 9.87e-40 147
Msa0174560 AT5G57620.1 53.846 117 53 1 1 116 1 117 1.06e-39 144
Msa0174560 AT3G24310.1 59.259 108 44 0 11 118 17 124 1.31e-39 142
Msa0174560 AT4G13480.1 53.782 119 55 0 13 131 7 125 1.56e-39 141
Msa0174560 AT2G32460.2 58.095 105 44 0 11 115 5 109 2.67e-39 146
Msa0174560 AT3G27920.1 52.756 127 53 3 13 136 15 137 4.37e-39 139
Msa0174560 AT3G27810.1 59.048 105 43 0 12 116 20 124 9.42e-39 138
Msa0174560 AT1G48000.1 59.048 105 43 0 10 114 30 134 1.07e-38 139
Msa0174560 AT3G30210.1 56.757 111 48 0 11 121 26 136 1.30e-38 139
Msa0174560 AT5G55020.1 57.009 107 46 0 10 116 24 130 3.25e-38 144
Msa0174560 AT3G01530.1 58.095 105 44 0 12 116 25 129 5.88e-38 135
Msa0174560 AT1G68320.1 57.692 104 44 0 12 115 19 122 1.11e-37 137
Msa0174560 AT5G06100.1 55.238 105 47 0 11 115 31 135 3.22e-37 140
Msa0174560 AT1G66370.1 53.043 115 50 1 1 115 1 111 8.34e-37 134
Msa0174560 AT5G06100.5 55.238 105 47 0 11 115 31 135 1.11e-36 139
Msa0174560 AT5G06100.2 55.238 105 47 0 11 115 31 135 1.11e-36 139
Msa0174560 AT5G06100.3 55.238 105 47 0 11 115 31 135 1.11e-36 139
Msa0174560 AT5G06100.4 55.238 105 47 0 11 115 31 135 1.11e-36 139
Msa0174560 AT1G25340.1 55.340 103 46 0 13 115 19 121 1.73e-36 134
Msa0174560 AT4G25560.1 59.223 103 42 0 13 115 11 113 2.79e-36 133
Msa0174560 AT2G47190.1 51.923 104 50 0 12 115 20 123 4.19e-36 132
Msa0174560 AT3G11440.2 54.808 104 47 0 12 115 41 144 1.15e-35 135
Msa0174560 AT4G26930.1 54.286 105 48 0 10 114 17 121 1.85e-35 134
Msa0174560 AT1G56650.1 55.357 112 50 0 11 122 7 118 2.61e-35 130
Msa0174560 AT3G06490.1 58.879 107 44 0 8 114 15 121 3.50e-35 131
Msa0174560 AT3G11440.3 54.808 104 47 0 12 115 41 144 3.91e-35 135
Msa0174560 AT3G11440.4 54.808 104 47 0 12 115 41 144 3.91e-35 135
Msa0174560 AT3G11440.1 54.808 104 47 0 12 115 41 144 3.91e-35 135
Msa0174560 AT1G66380.1 56.190 105 46 0 11 115 7 111 1.15e-34 125
Msa0174560 AT5G52260.1 56.311 103 45 0 13 115 13 115 1.18e-33 126
Msa0174560 AT2G26960.1 50.943 106 52 0 9 114 17 122 3.00e-33 128
Msa0174560 AT1G66390.1 56.190 105 46 0 11 115 7 111 3.27e-33 124
Msa0174560 AT5G49620.1 57.009 107 46 0 8 114 22 128 6.45e-33 125
Msa0174560 AT3G53200.1 57.692 104 44 0 12 115 9 112 7.36e-33 123
Msa0174560 AT3G46130.1 51.429 105 51 0 11 115 8 112 1.07e-32 123
Msa0174560 AT5G59780.3 51.456 103 50 0 13 115 9 111 1.20e-32 122
Msa0174560 AT3G48920.1 50.962 104 51 0 13 116 19 122 3.04e-32 122
Msa0174560 AT1G25340.2 52.427 103 44 1 13 115 19 116 3.29e-32 122
Msa0174560 AT1G25340.3 52.427 103 44 1 13 115 19 116 5.06e-32 122
Msa0174560 AT3G12820.2 70.000 70 21 0 47 116 1 70 1.51e-30 115
Msa0174560 AT5G14750.3 63.636 77 25 1 40 116 13 86 3.80e-30 114
Msa0174560 AT5G35550.2 54.717 106 41 1 45 143 50 155 1.05e-29 115
Msa0174560 AT5G49620.2 50.413 121 46 1 8 114 22 142 2.46e-29 115
Msa0174560 AT5G26660.2 62.500 88 33 0 45 132 14 101 1.55e-28 114
Msa0174560 AT3G60460.1 46.789 109 57 1 7 114 6 114 6.97e-28 111
Msa0174560 AT5G40350.2 63.514 74 27 0 43 116 3 76 8.68e-28 107
Msa0174560 AT3G27810.2 62.500 72 27 0 45 116 4 75 1.48e-26 104
Msa0174560 AT2G26950.1 43.396 106 60 0 9 114 13 118 5.31e-26 107
Msa0174560 AT5G59780.2 61.972 71 27 0 45 115 20 90 2.97e-25 102
Msa0174560 AT3G46130.4 54.348 92 38 2 24 115 3 90 3.29e-25 102
Msa0174560 AT3G09230.1 45.536 112 52 2 14 121 55 161 4.54e-25 105
Msa0174560 AT3G46130.3 61.111 72 28 0 44 115 9 80 4.76e-25 102
Msa0174560 AT3G47600.2 61.111 72 28 0 45 116 39 110 1.33e-24 103
Msa0174560 AT3G53200.2 61.972 71 27 0 45 115 9 79 3.78e-24 99.0
Msa0174560 AT2G23290.1 48.039 102 52 1 14 115 13 113 1.10e-23 100
Msa0174560 AT1G69560.1 29.258 229 135 7 9 224 102 316 1.65e-23 100
Msa0174560 AT3G50060.1 41.270 126 73 1 14 139 6 130 1.79e-23 99.4
Msa0174560 AT3G55730.1 50.000 102 50 1 14 115 56 156 2.37e-23 100
Msa0174560 AT1G69560.2 29.258 229 135 7 9 224 118 332 2.44e-23 99.8
Msa0174560 AT2G39880.1 48.113 106 46 2 14 115 50 150 3.35e-23 99.8
Msa0174560 AT1G66380.3 59.722 72 29 0 44 115 7 78 6.16e-23 92.8
Msa0174560 AT4G37260.1 46.078 102 54 1 14 115 13 113 7.72e-23 98.2
Msa0174560 AT5G67300.1 46.078 102 54 1 14 115 6 106 4.57e-22 95.5
Msa0174560 AT3G27785.1 41.818 110 59 2 8 115 183 289 1.51e-21 95.9
Msa0174560 AT1G17950.1 40.367 109 64 1 14 122 5 112 2.15e-21 92.4
Msa0174560 AT1G22640.3 62.295 61 23 0 58 118 1 61 2.54e-21 91.3
Msa0174560 AT1G26780.2 27.542 236 141 8 12 234 96 314 3.15e-21 94.0
Msa0174560 AT4G18770.1 41.441 111 60 2 8 116 211 318 4.04e-21 94.7
Msa0174560 AT5G40360.1 36.923 130 79 3 1 129 145 272 4.74e-21 93.6
Msa0174560 AT1G26780.1 42.857 105 57 2 12 115 96 198 7.40e-21 91.7
Msa0174560 AT5G14750.4 59.322 59 24 0 58 116 1 59 1.73e-20 87.0
Msa0174560 AT5G14750.2 59.322 59 24 0 58 116 1 59 1.73e-20 87.0
Msa0174560 AT5G02320.1 42.202 109 54 2 12 116 125 228 1.93e-20 93.2
Msa0174560 AT5G02320.2 42.202 109 54 2 12 116 125 228 1.93e-20 93.2
Msa0174560 AT5G02320.3 42.202 109 54 2 12 116 65 168 2.31e-20 92.8
Msa0174560 AT1G66380.2 50.000 84 42 0 11 94 7 90 2.37e-20 85.9
Msa0174560 AT3G09370.2 43.519 108 52 2 12 115 133 235 3.42e-20 92.4
Msa0174560 AT3G09370.2 34.188 117 73 3 1 116 72 185 6.26e-11 64.3
Msa0174560 AT3G09370.1 43.519 108 52 2 12 115 128 230 3.62e-20 92.4
Msa0174560 AT3G09370.1 34.188 117 73 3 1 116 67 180 6.22e-11 64.3
Msa0174560 AT3G09370.3 43.519 108 52 2 12 115 141 243 4.22e-20 92.0
Msa0174560 AT3G09370.3 34.188 117 73 3 1 116 80 193 6.28e-11 64.3
Msa0174560 AT5G58850.1 44.762 105 55 2 12 115 103 205 6.55e-20 90.9
Msa0174560 AT1G18960.1 41.000 100 56 2 17 116 13 109 6.85e-20 89.4
Msa0174560 AT5G11510.5 36.434 129 77 2 12 138 79 204 7.04e-20 92.0
Msa0174560 AT5G11510.2 36.434 129 77 2 12 138 79 204 7.29e-20 91.7
Msa0174560 AT5G11510.3 36.434 129 77 2 12 138 79 204 7.83e-20 92.0
Msa0174560 AT5G11510.1 36.434 129 77 2 12 138 79 204 7.83e-20 92.0
Msa0174560 AT5G11510.4 36.434 129 77 2 12 138 79 204 7.83e-20 92.0
Msa0174560 AT3G29020.2 30.601 183 97 5 14 177 67 238 8.10e-20 89.4
Msa0174560 AT3G23250.2 59.322 59 24 0 58 116 1 59 1.69e-19 86.7
Msa0174560 AT1G73410.2 42.202 109 60 2 14 121 6 112 2.49e-19 85.9
Msa0174560 AT3G29020.1 39.806 103 61 1 14 116 65 166 2.51e-19 86.3
Msa0174560 AT5G11050.1 44.660 103 54 2 14 115 105 205 2.94e-19 89.0
Msa0174560 AT1G73410.1 42.202 109 60 2 14 121 6 112 2.99e-19 86.3
Msa0174560 AT1G71030.2 56.061 66 29 0 51 116 5 70 6.08e-19 84.0
Msa0174560 AT1G71030.1 50.633 79 38 1 38 116 7 84 7.00e-19 84.3
Msa0174560 AT5G17800.1 40.196 102 60 1 14 115 93 193 8.14e-19 86.7
Msa0174560 AT4G32730.1 37.037 108 67 1 12 119 85 191 8.70e-19 88.6
Msa0174560 AT4G32730.1 34.615 104 66 2 14 116 35 137 1.09e-11 67.0
Msa0174560 AT4G32730.5 37.037 108 67 1 12 119 85 191 8.74e-19 88.6
Msa0174560 AT4G32730.5 34.615 104 66 2 14 116 35 137 1.10e-11 67.0
Msa0174560 AT4G32730.4 37.037 108 67 1 12 119 85 191 8.74e-19 88.6
Msa0174560 AT4G32730.4 34.615 104 66 2 14 116 35 137 1.10e-11 67.0
Msa0174560 AT4G32730.3 37.037 108 67 1 12 119 85 191 8.74e-19 88.6
Msa0174560 AT4G32730.3 34.615 104 66 2 14 116 35 137 1.10e-11 67.0
Msa0174560 AT4G32730.2 37.037 108 67 1 12 119 85 191 8.74e-19 88.6
Msa0174560 AT4G32730.2 34.615 104 66 2 14 116 35 137 1.10e-11 67.0
Msa0174560 AT4G33450.1 33.544 158 92 5 3 153 13 164 1.16e-18 85.1
Msa0174560 AT5G39700.1 37.255 102 63 1 15 116 57 157 4.00e-16 76.3
Msa0174560 AT4G00540.2 37.838 111 65 2 12 119 101 210 7.74e-16 79.0
Msa0174560 AT2G25230.1 35.185 108 69 1 7 114 19 125 1.03e-15 76.3
Msa0174560 AT4G00540.1 37.838 111 65 2 12 119 99 208 1.13e-15 78.6
Msa0174560 AT2G37630.1 31.624 117 78 1 14 128 4 120 2.18e-15 77.0
Msa0174560 AT2G02820.3 37.234 94 58 1 17 110 33 125 2.77e-14 73.6
Msa0174560 AT4G25560.2 65.217 46 16 0 70 115 2 47 3.85e-14 71.2
Msa0174560 AT2G02820.2 37.234 94 58 1 17 110 33 125 5.59e-14 73.6
Msa0174560 AT2G02820.1 37.234 94 58 1 17 110 33 125 5.98e-14 73.2
Msa0174560 AT1G14350.2 36.170 94 59 1 17 110 28 120 4.07e-13 70.9
Msa0174560 AT1G14350.1 36.170 94 59 1 17 110 28 120 4.07e-13 70.9
Msa0174560 AT5G40430.1 32.407 108 71 2 7 114 47 152 7.53e-13 68.2
Msa0174560 AT5G59780.1 56.522 46 20 0 70 115 1 46 3.41e-12 64.7
Msa0174560 AT3G46130.2 56.522 46 20 0 70 115 1 46 1.00e-11 63.9

Find 100 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAGAATGGTCTTTGAATA+TGG 0.209366 1_4:-60239181 Msa0174560:CDS
GTTTAGATTTGGATGATAAA+TGG 0.236357 1_4:-60239158 Msa0174560:CDS
GGAAGGTGATAGTAAGAGTT+TGG 0.236899 1_4:-60239040 Msa0174560:CDS
AGACAGTCTTAAATATAATT+TGG 0.237068 1_4:-60239259 Msa0174560:CDS
TGTTCTGGTTTGAATGTTTA+GGG 0.266466 1_4:-60238942 Msa0174560:three_prime_UTR
GGGAATTTGAAGGATTATTA+AGG 0.269142 1_4:-60243596 Msa0174560:intron
CTCATACGTTTCATAATTGT+TGG 0.271782 1_4:-60244378 Msa0174560:five_prime_UTR
TTTGAATATGGGTTTAGATT+TGG 0.276771 1_4:-60239169 Msa0174560:CDS
GAATTATGTGACGACATCTT+AGG 0.277715 1_4:-60239462 Msa0174560:CDS
GTGTTGATGATAATAGTAAT+AGG 0.294687 1_4:-60239110 Msa0174560:CDS
GTTTGGTTCACACTACTTTC+GGG 0.297201 1_4:+60239222 None:intergenic
GGTTTGGTTCACACTACTTT+CGG 0.304715 1_4:+60239221 None:intergenic
ATAATTTATAGAATTGAAAA+AGG 0.304836 1_4:+60244413 None:intergenic
CTACTCATACCTGCATTCTT+TGG 0.312993 1_4:+60243984 None:intergenic
GTGTTCTGGTTTGAATGTTT+AGG 0.316438 1_4:-60238943 Msa0174560:three_prime_UTR
AAACATTCACTAGTTAGATA+TGG 0.326108 1_4:-60244123 Msa0174560:exon
GTACGTGGAATTTGAACTTC+TGG 0.344780 1_4:+60239573 None:intergenic
AGCTACCTAGTTAGTGTTTG+AGG 0.345365 1_4:+60244289 None:intergenic
TCCACACTACTTATGGTAAC+AGG 0.346473 1_4:-60243476 Msa0174560:intron
ATTTCATTGTCCGTTCTTCC+TGG 0.346810 1_4:+60239789 None:intergenic
GACAATGGAAAATTGTTTGC+TGG 0.348197 1_4:-60239373 Msa0174560:CDS
AAGTCAATGGAGAAGGTTCT+TGG 0.351813 1_4:-60244016 Msa0174560:CDS
ATTTGGATGATAAATGGAAT+TGG 0.354111 1_4:-60239152 Msa0174560:CDS
AACAAAATGATTTGATTGCT+TGG 0.355944 1_4:-60238999 Msa0174560:CDS
ATGAAGGCATGAGCGTGTTC+TGG 0.371620 1_4:-60238957 Msa0174560:three_prime_UTR
TCCACTTTCACCGTTATTTG+AGG 0.382015 1_4:+60239200 None:intergenic
GTGAAGCTCCACACTACTTA+TGG 0.384648 1_4:-60243483 Msa0174560:CDS
TTTGGATGATAAATGGAATT+GGG 0.393935 1_4:-60239151 Msa0174560:CDS
AAGACTGTCTCCATCATCAT+TGG 0.394370 1_4:+60239272 None:intergenic
GGACGAACATCCATGATCTT+TGG 0.402215 1_4:+60239696 None:intergenic
TTTCACCGTTATTTGAGGTT+TGG 0.409041 1_4:+60239205 None:intergenic
GGAGAATGGTCTTTGAATAT+GGG 0.410310 1_4:-60239180 Msa0174560:CDS
TCAAAATACATTCAAGTCAA+TGG 0.412303 1_4:-60244029 Msa0174560:CDS
GTGAGAAAGTAGGGCTGAAA+AGG 0.422924 1_4:-60244085 Msa0174560:CDS
TAGGGCTGAAAAGGGGTAGA+TGG 0.426871 1_4:-60244076 Msa0174560:CDS
AAGTCAAGAGAGAGAAATGA+TGG 0.429496 1_4:-60239325 Msa0174560:CDS
TGGCAAGTGGCTAGCTATCA+TGG 0.430055 1_4:+60239809 None:intergenic
TCATACGTTTCATAATTGTT+GGG 0.433580 1_4:-60244377 Msa0174560:five_prime_UTR
CTCCTTGTTGTGAGAAAGTA+GGG 0.452955 1_4:-60244094 Msa0174560:CDS
AATTATGTGACGACATCTTA+GGG 0.454312 1_4:-60239461 Msa0174560:CDS
AACATTCACTAGTTAGATAT+GGG 0.455592 1_4:-60244122 Msa0174560:exon
GGTTGTGTGAAGATGATGAT+TGG 0.456468 1_4:-60239062 Msa0174560:CDS
GAAGGTGATAGTAAGAGTTT+GGG 0.457441 1_4:-60239039 Msa0174560:CDS
TGAGAAAGTAGGGCTGAAAA+GGG 0.462843 1_4:-60244084 Msa0174560:CDS
TGTTGATGATAATAGTAATA+GGG 0.462900 1_4:-60239109 Msa0174560:CDS
AACTATAGAGCCAAAGATCA+TGG 0.469285 1_4:-60239706 Msa0174560:CDS
GAAAGAACAACCAATGATGA+TGG 0.472679 1_4:-60239282 Msa0174560:CDS
ACCTCAAATAACGGTGAAAG+TGG 0.473918 1_4:-60239201 Msa0174560:CDS
GAGAGAGAAATGATGGGTGA+TGG 0.498146 1_4:-60239318 Msa0174560:CDS
ATGTGGTAAAACAAGTCGTT+GGG 0.503146 1_4:-60239661 Msa0174560:CDS
GTTGTGTGAAGATGATGATT+GGG 0.508074 1_4:-60239061 Msa0174560:CDS
TTGAAGGATTATTAAGGTGC+GGG 0.508154 1_4:-60243590 Msa0174560:intron
TTGAGAACTGACCTCAAAAG+AGG 0.515320 1_4:-60243537 Msa0174560:CDS
ATGATAGCTAGCCACTTGCC+AGG 0.516667 1_4:-60239807 Msa0174560:CDS
GGAAGAGTTGTAGACTAAGA+TGG 0.530001 1_4:-60243569 Msa0174560:CDS
CTAGACAACGAGGTGGAGAA+AGG 0.530780 1_4:+60244319 None:intergenic
GATCTTTGGCTCTATAGTTG+TGG 0.535260 1_4:+60239710 None:intergenic
TGCTGAGGTGAGAATTCCAA+TGG 0.535972 1_4:+60239760 None:intergenic
ACTCCTTGTTGTGAGAAAGT+AGG 0.539369 1_4:-60244095 Msa0174560:CDS
TTACCACATTTACGCTTAGG+AGG 0.541585 1_4:+60239675 None:intergenic
GTGAACCAAACCTCAAATAA+CGG 0.548903 1_4:-60239210 Msa0174560:CDS
AGGAAACATATCTGCTCAAG+AGG 0.548913 1_4:-60243517 Msa0174560:CDS
TCATTCCTCAAACACTAACT+AGG 0.554171 1_4:-60244294 Msa0174560:five_prime_UTR
AATGTGGTAAAACAAGTCGT+TGG 0.554279 1_4:-60239662 Msa0174560:CDS
TACATTCAAGTCAATGGAGA+AGG 0.566462 1_4:-60244023 Msa0174560:CDS
ATGACATTAATGAAGACAGT+GGG 0.566755 1_4:-60239422 Msa0174560:CDS
AGAGAAATGATGGGTGATGG+AGG 0.569392 1_4:-60239315 Msa0174560:CDS
TGTCCGTTCTTCCTGGCAAG+TGG 0.570131 1_4:+60239796 None:intergenic
TAGCCACTTGCCAGGAAGAA+CGG 0.570228 1_4:-60239799 Msa0174560:CDS
ATGGAATTGGGAGAGTGTGA+TGG 0.574714 1_4:-60239139 Msa0174560:CDS
AATTGTTTGCTGGAAACAAG+TGG 0.575262 1_4:-60239363 Msa0174560:CDS
ATAACGGTGAAAGTGGAGAA+TGG 0.577565 1_4:-60239194 Msa0174560:CDS
AGGTCATTGCCAAAGAATGC+AGG 0.577934 1_4:-60243993 Msa0174560:intron
TTTGAAGGATTATTAAGGTG+CGG 0.594972 1_4:-60243591 Msa0174560:intron
AGTCAAGAGAGAGAAATGAT+GGG 0.595941 1_4:-60239324 Msa0174560:CDS
TCATTAAAACATATCTGTGG+TGG 0.602796 1_4:+60244457 None:intergenic
TTTGGTTCACACTACTTTCG+GGG 0.604186 1_4:+60239223 None:intergenic
CAATCTAGTGAAGGAGTACG+TGG 0.611516 1_4:+60239558 None:intergenic
TTGTAACAATGCTACGATCG+TGG 0.614141 1_4:+60244500 None:intergenic
AAGTACTCATGTCAAGACAA+TGG 0.614680 1_4:-60239388 Msa0174560:CDS
TCAATGGAGAAGGTTCTTGG+AGG 0.615802 1_4:-60244013 Msa0174560:CDS
AGCCCTACTTTCTCACAACA+AGG 0.617633 1_4:+60244092 None:intergenic
ATTGTTTGCTGGAAACAAGT+GGG 0.617843 1_4:-60239362 Msa0174560:CDS
CGTCCTCCTAAGCGTAAATG+TGG 0.619864 1_4:-60239678 Msa0174560:CDS
ACCTGTTACCATAAGTAGTG+TGG 0.624649 1_4:+60243475 None:intergenic
GAGAAAGTAGGGCTGAAAAG+GGG 0.627925 1_4:-60244083 Msa0174560:CDS
GAAAATAATTGATGACGTGG+AGG 0.627952 1_4:-60239520 Msa0174560:CDS
TACAAAATAATAAAAGTGAG+TGG 0.632260 1_4:-60238813 Msa0174560:three_prime_UTR
ACAACTTCACAATCTAGTGA+AGG 0.654135 1_4:+60239549 None:intergenic
GGTGGCAGATTGTGCCACGT+TGG 0.664424 1_4:+60244475 None:intergenic
AGAGAAAATAATTGATGACG+TGG 0.669316 1_4:-60239523 Msa0174560:CDS
TATTCATTAAAACATATCTG+TGG 0.669661 1_4:+60244454 None:intergenic
GATGACATTAATGAAGACAG+TGG 0.688798 1_4:-60239423 Msa0174560:CDS
AGTAGTGTGGAGCTTCACAA+TGG 0.695094 1_4:+60243488 None:intergenic
TGTGAAGATGATGATTGGGA+AGG 0.699680 1_4:-60239057 Msa0174560:CDS
AATGAGACTAGACAACGAGG+TGG 0.709068 1_4:+60244312 None:intergenic
AAAAGGTAGCAATGTGTGTG+GGG 0.717965 1_4:+60244430 None:intergenic
TGACATTAATGAAGACAGTG+GGG 0.734598 1_4:-60239421 Msa0174560:CDS
AGGAATGAGACTAGACAACG+AGG 0.811771 1_4:+60244309 None:intergenic
GCATTGTTACAAAACCAACG+TGG 0.830289 1_4:-60244489 Msa0174560:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTTATAGAATTGAAAA+AGG + chr1_4:60238900-60238919 None:intergenic 10.0%
!!! ATTGAATATTATAGTTTTAA+GGG - chr1_4:60239871-60239890 Msa0174560:intron 10.0%
!!! ATTTACATATTTTAAAGTTA+GGG - chr1_4:60240559-60240578 Msa0174560:intron 10.0%
!!! TATTTTATCTACTTTTAAAT+AGG - chr1_4:60241578-60241597 Msa0174560:intron 10.0%
!!! ATAATAGACTTTTTAAATAT+AGG + chr1_4:60241840-60241859 None:intergenic 10.0%
!! CAAAAAATAAAATACTTTAT+AGG + chr1_4:60242694-60242713 None:intergenic 10.0%
!!! CTATAAAGTATTTTATTTTT+TGG - chr1_4:60242692-60242711 Msa0174560:intron 10.0%
!!! TTTTCTTTATTTTTTTAAGT+AGG - chr1_4:60242924-60242943 Msa0174560:intron 10.0%
!!! ATTTTCTTTAGTATTAATAA+CGG + chr1_4:60243708-60243727 None:intergenic 10.0%
!! ATAATGATACTATATATTAG+AGG - chr1_4:60239366-60239385 Msa0174560:CDS 15.0%
!!! CATTGAATATTATAGTTTTA+AGG - chr1_4:60239870-60239889 Msa0174560:intron 15.0%
!! TTCATCTATAATTAAAACTA+GGG + chr1_4:60240066-60240085 None:intergenic 15.0%
!! TTTCATCTATAATTAAAACT+AGG + chr1_4:60240067-60240086 None:intergenic 15.0%
!!! AAAAATTTACCCTTTTATTT+AGG - chr1_4:60240120-60240139 Msa0174560:intron 15.0%
!! ATTATTACAAATAAAGACAT+AGG + chr1_4:60240171-60240190 None:intergenic 15.0%
!! TTTATTTGTAATAATGTAGA+TGG - chr1_4:60240176-60240195 Msa0174560:intron 15.0%
!! AAAAAACTCTTAAATTTGAT+GGG + chr1_4:60240211-60240230 None:intergenic 15.0%
!! AAAAAAACTCTTAAATTTGA+TGG + chr1_4:60240212-60240231 None:intergenic 15.0%
!! TAAATAAACGAAAATGTAAA+TGG + chr1_4:60240438-60240457 None:intergenic 15.0%
!!! CATTTACATATTTTAAAGTT+AGG - chr1_4:60240558-60240577 Msa0174560:intron 15.0%
!! AAAAATTATTCCAGTTTAAT+TGG + chr1_4:60240713-60240732 None:intergenic 15.0%
!!! AACAATTTAGTAGTTTTATT+TGG + chr1_4:60241036-60241055 None:intergenic 15.0%
!!! TAATGACTTTTATAATAAGT+AGG + chr1_4:60241551-60241570 None:intergenic 15.0%
!! AAAATCCTATTTAAGTAAAT+AGG + chr1_4:60241994-60242013 None:intergenic 15.0%
!! ATAATATAGTTCAAATACAT+CGG + chr1_4:60242535-60242554 None:intergenic 15.0%
!! AAAGAAAAACAAATATCATA+AGG - chr1_4:60242747-60242766 Msa0174560:intron 15.0%
!! AAACAAAAAAAATCACAAAT+TGG - chr1_4:60243268-60243287 Msa0174560:intron 15.0%
!!! TTTTTTTTGAACAAACAATT+TGG - chr1_4:60243322-60243341 Msa0174560:intron 15.0%
!!! ATCATTTTGCTAATAAATTT+TGG - chr1_4:60243369-60243388 Msa0174560:intron 15.0%
!!! AATTATGATTTGAAGTTTAT+TGG - chr1_4:60243456-60243475 Msa0174560:intron 15.0%
!!! ATTATGATTTGAAGTTTATT+GGG - chr1_4:60243457-60243476 Msa0174560:intron 15.0%
!!! ATAAAGATAATCTTTTGAAT+TGG - chr1_4:60244227-60244246 Msa0174560:intron 15.0%
!! TATTCATTAAAACATATCTG+TGG + chr1_4:60238859-60238878 None:intergenic 20.0%
!!! TTTATTTTATAGTAGCATTG+TGG - chr1_4:60239160-60239179 Msa0174560:CDS 20.0%
!!! AAATTACTGTGTTAGTATTT+TGG - chr1_4:60239592-60239611 Msa0174560:CDS 20.0%
!!! TTTTTAACTGGCATTTTATT+TGG - chr1_4:60239693-60239712 Msa0174560:CDS 20.0%
!!! TTTTAACTGGCATTTTATTT+GGG - chr1_4:60239694-60239713 Msa0174560:CDS 20.0%
!! AAGAATGATCCTAAATAAAA+GGG + chr1_4:60240132-60240151 None:intergenic 20.0%
!!! ATGACAAAGTTTTTTTTTGA+AGG + chr1_4:60240328-60240347 None:intergenic 20.0%
!!! CTTTGTCATTAATTATTTCT+TGG - chr1_4:60240339-60240358 Msa0174560:intron 20.0%
!!! TTTTTCTTACGAAAAAACAA+AGG + chr1_4:60240762-60240781 None:intergenic 20.0%
!!! ATTTTAGGTACAATAATAGA+GGG + chr1_4:60240834-60240853 None:intergenic 20.0%
!!! TATTTTAGGTACAATAATAG+AGG + chr1_4:60240835-60240854 None:intergenic 20.0%
!!! TAACTACACGTTATTATTTT+GGG + chr1_4:60240911-60240930 None:intergenic 20.0%
!!! ATAACTACACGTTATTATTT+TGG + chr1_4:60240912-60240931 None:intergenic 20.0%
!!! CTAGTACTTATTATTTTTTG+AGG + chr1_4:60241277-60241296 None:intergenic 20.0%
!! AATAAGTACTAGTAATTTCA+AGG - chr1_4:60241285-60241304 Msa0174560:intron 20.0%
!! TCTTTATAATGTCCTAATAA+AGG - chr1_4:60241344-60241363 Msa0174560:intron 20.0%
!! TAAGCAAAAATTCAATTTCT+AGG - chr1_4:60241627-60241646 Msa0174560:intron 20.0%
!! ATGCATATAGTCTTTATTAT+AGG - chr1_4:60241665-60241684 Msa0174560:intron 20.0%
!!! CTTTTTAAATATAGGCTTTA+AGG + chr1_4:60241832-60241851 None:intergenic 20.0%
!!! TTTTAATAACATGCATAAAC+AGG - chr1_4:60241923-60241942 Msa0174560:intron 20.0%
!! AAGAAAATGCTAATTACTTA+AGG + chr1_4:60242911-60242930 None:intergenic 20.0%
!! TTGAATAAGTAGAAAATCTA+GGG + chr1_4:60243052-60243071 None:intergenic 20.0%
!!! TAGATTTTCTACTTATTCAA+CGG - chr1_4:60243052-60243071 Msa0174560:intron 20.0%
!!! TAGTAGTACGTATTATTTTT+TGG - chr1_4:60243241-60243260 Msa0174560:intron 20.0%
!!! TAATAAATTTTGGCATAAAG+TGG - chr1_4:60243379-60243398 Msa0174560:intron 20.0%
!! AATATACTAGTATATACACA+AGG - chr1_4:60243429-60243448 Msa0174560:intron 20.0%
!! ACAATGAAATTAAAAACCAT+TGG - chr1_4:60243534-60243553 Msa0174560:CDS 20.0%
!! AGACAGTCTTAAATATAATT+TGG - chr1_4:60244051-60244070 Msa0174560:CDS 20.0%
!!! TGTTGATGATAATAGTAATA+GGG - chr1_4:60244201-60244220 Msa0174560:intron 20.0%
!! TACAAAATAATAAAAGTGAG+TGG - chr1_4:60244497-60244516 Msa0174560:five_prime_UTR 20.0%
! TCATACGTTTCATAATTGTT+GGG - chr1_4:60238933-60238952 Msa0174560:three_prime_UTR 25.0%
! TAAGCACATGAAAATTGAAA+TGG + chr1_4:60239085-60239104 None:intergenic 25.0%
! AAACATTCACTAGTTAGATA+TGG - chr1_4:60239187-60239206 Msa0174560:CDS 25.0%
! AACATTCACTAGTTAGATAT+GGG - chr1_4:60239188-60239207 Msa0174560:CDS 25.0%
! TCAAAATACATTCAAGTCAA+TGG - chr1_4:60239281-60239300 Msa0174560:CDS 25.0%
! TCTCTCAAACTAAATACATT+TGG + chr1_4:60239392-60239411 None:intergenic 25.0%
!! ACTTTTAATCATGCAAATGA+TGG + chr1_4:60239463-60239482 None:intergenic 25.0%
!!! CATTTTATTTGGGAATTTGA+AGG - chr1_4:60239704-60239723 Msa0174560:CDS 25.0%
!!! TTTAAGAAAAGTGCTAAAGT+TGG + chr1_4:60240099-60240118 None:intergenic 25.0%
! CAAGAATGATCCTAAATAAA+AGG + chr1_4:60240133-60240152 None:intergenic 25.0%
!!! ACTTTAGAATTGCTTTTTCT+AGG - chr1_4:60240404-60240423 Msa0174560:intron 25.0%
!! GTGGAATATTAATTTTGTGT+TGG + chr1_4:60240504-60240523 None:intergenic 25.0%
! AAATATGTAAATGAAGAGTG+TGG + chr1_4:60240551-60240570 None:intergenic 25.0%
!! AAATTTAAAATACTCGTGTC+AGG - chr1_4:60240675-60240694 Msa0174560:intron 25.0%
!!! TATGTTTTGGAATAATTCGT+GGG - chr1_4:60240800-60240819 Msa0174560:intron 25.0%
!! TACAATAATAGAGGGTTTTA+GGG + chr1_4:60240826-60240845 None:intergenic 25.0%
!! ACACTACACGTTATTATTTT+AGG + chr1_4:60240849-60240868 None:intergenic 25.0%
! AACTACACGTTATTAATTAG+TGG + chr1_4:60240879-60240898 None:intergenic 25.0%
!!! TTCTACACGTTATTATTTTG+TGG + chr1_4:60240942-60240961 None:intergenic 25.0%
!!! TTTAGTAGTTTTATTTGGAG+AGG + chr1_4:60241031-60241050 None:intergenic 25.0%
! AGGACATTATAAAGAAAATC+CGG + chr1_4:60241339-60241358 None:intergenic 25.0%
! AACAGTAGTACTAATGAATA+GGG - chr1_4:60241369-60241388 Msa0174560:intron 25.0%
!! TTTTTGCTTATATTAGTGAC+TGG + chr1_4:60241726-60241745 None:intergenic 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG - chr1_4:60241726-60241745 Msa0174560:intron 25.0%
!! TATAGTGAAATAGGCTTTTA+AGG + chr1_4:60241806-60241825 None:intergenic 25.0%
! TAAAAGCCTATTTCACTATA+AGG - chr1_4:60241806-60241825 Msa0174560:intron 25.0%
!! CCAACAAAATCTTTAAAAGA+GGG + chr1_4:60242429-60242448 None:intergenic 25.0%
!! TCCAACAAAATCTTTAAAAG+AGG + chr1_4:60242430-60242449 None:intergenic 25.0%
! AATATTTGATAGAAGAACAC+GGG + chr1_4:60242488-60242507 None:intergenic 25.0%
! GAATATTTGATAGAAGAACA+CGG + chr1_4:60242489-60242508 None:intergenic 25.0%
! TTCTTAAGAAACATTGACAT+TGG - chr1_4:60242616-60242635 Msa0174560:intron 25.0%
! ATACTTTATAGGAAAACAGT+TGG + chr1_4:60242683-60242702 None:intergenic 25.0%
!!! TCGGTTGGTAATATAATATA+CGG - chr1_4:60243011-60243030 Msa0174560:intron 25.0%
! GTTGAATAAGTAGAAAATCT+AGG + chr1_4:60243053-60243072 None:intergenic 25.0%
! TCAAAAAATAGTACTACTCA+GGG + chr1_4:60243106-60243125 None:intergenic 25.0%
! ATCAAAAAATAGTACTACTC+AGG + chr1_4:60243107-60243126 None:intergenic 25.0%
!!! TGAGTAGTACTATTTTTTGA+TGG - chr1_4:60243106-60243125 Msa0174560:intron 25.0%
! TAATGTTTCACCAAATTGTT+AGG + chr1_4:60243207-60243226 None:intergenic 25.0%
!! ATTTGGTGAAACATTAAATG+AGG - chr1_4:60243211-60243230 Msa0174560:intron 25.0%
!!! ACAAATTGGTCTTTGAATAT+GGG - chr1_4:60243282-60243301 Msa0174560:intron 25.0%
! TTTGAATATGGGTTTAGATT+TGG - chr1_4:60244141-60244160 Msa0174560:five_prime_UTR 25.0%
! GTTTAGATTTGGATGATAAA+TGG - chr1_4:60244152-60244171 Msa0174560:intron 25.0%
! ATTTGGATGATAAATGGAAT+TGG - chr1_4:60244158-60244177 Msa0174560:intron 25.0%
! TTTGGATGATAAATGGAATT+GGG - chr1_4:60244159-60244178 Msa0174560:intron 25.0%
!!! GTGTTGATGATAATAGTAAT+AGG - chr1_4:60244200-60244219 Msa0174560:intron 25.0%
!!! ATCAAATCATTTTGTTTCTG+AGG + chr1_4:60244307-60244326 None:intergenic 25.0%
! AACAAAATGATTTGATTGCT+TGG - chr1_4:60244311-60244330 Msa0174560:five_prime_UTR 25.0%
!!! TTAGGGTTTTTTCTTTTGTA+TGG - chr1_4:60244385-60244404 Msa0174560:five_prime_UTR 25.0%
! TTCAAAAAGCTACACTAAAT+TGG + chr1_4:60244441-60244460 None:intergenic 25.0%
TCATTAAAACATATCTGTGG+TGG + chr1_4:60238856-60238875 None:intergenic 30.0%
CTCATACGTTTCATAATTGT+TGG - chr1_4:60238932-60238951 Msa0174560:three_prime_UTR 30.0%
!!! ATAGCTACCTTTGTTTTTGA+CGG + chr1_4:60239057-60239076 None:intergenic 30.0%
!!! TTAGTATTTTGGTAGTGACT+AGG - chr1_4:60239603-60239622 Msa0174560:CDS 30.0%
!!! TAGTATTTTGGTAGTGACTA+GGG - chr1_4:60239604-60239623 Msa0174560:CDS 30.0%
GACAATGCATAATATATGCA+AGG + chr1_4:60239643-60239662 None:intergenic 30.0%
GGGAATTTGAAGGATTATTA+AGG - chr1_4:60239714-60239733 Msa0174560:CDS 30.0%
TTTGAAGGATTATTAAGGTG+CGG - chr1_4:60239719-60239738 Msa0174560:CDS 30.0%
!!! GTTTTAAGGGAAATGTTAAC+CGG - chr1_4:60239884-60239903 Msa0174560:intron 30.0%
AAAATGAATAAGAGATCACG+TGG + chr1_4:60240523-60240542 None:intergenic 30.0%
GTCATTGTTTCCAATTAAAC+TGG - chr1_4:60240700-60240719 Msa0174560:intron 30.0%
CACGAATTATTCCAAAACAT+AGG + chr1_4:60240801-60240820 None:intergenic 30.0%
!!! CTATGTTTTGGAATAATTCG+TGG - chr1_4:60240799-60240818 Msa0174560:intron 30.0%
! GTACAATAATAGAGGGTTTT+AGG + chr1_4:60240827-60240846 None:intergenic 30.0%
CTATTCATTAGTACTACTGT+TGG + chr1_4:60241370-60241389 None:intergenic 30.0%
CAACAGTAGTACTAATGAAT+AGG - chr1_4:60241368-60241387 Msa0174560:intron 30.0%
TAGTACTAATGAATAGGGTT+GGG - chr1_4:60241374-60241393 Msa0174560:intron 30.0%
!!! TACAATTTTTTTCGTAGGTC+AGG + chr1_4:60241432-60241451 None:intergenic 30.0%
!!! AGGCTTACAATTTTTTTCGT+AGG + chr1_4:60241437-60241456 None:intergenic 30.0%
TAATAAGTAGGCCTGTAAAT+AGG + chr1_4:60241539-60241558 None:intergenic 30.0%
TATTGAATGAACCTAGAAAG+TGG - chr1_4:60241702-60241721 Msa0174560:intron 30.0%
TAAGCAAAAATCCACTTTCT+AGG + chr1_4:60241716-60241735 None:intergenic 30.0%
GACAAGCATTACAATGAAAT+AGG + chr1_4:60241770-60241789 None:intergenic 30.0%
! TTAAGGCCTTATAGTGAAAT+AGG + chr1_4:60241815-60241834 None:intergenic 30.0%
CCTATTTAAGTAAATAGGTC+AGG + chr1_4:60241989-60242008 None:intergenic 30.0%
CCTGACCTATTTACTTAAAT+AGG - chr1_4:60241986-60242005 Msa0174560:intron 30.0%
TTATTAAAAAGGCTAGGCTT+AGG + chr1_4:60242024-60242043 None:intergenic 30.0%
ACCTGTTTATTAAAAAGGCT+AGG + chr1_4:60242030-60242049 None:intergenic 30.0%
AACGTGCACAAAATGATAAT+TGG - chr1_4:60242135-60242154 Msa0174560:intron 30.0%
ACGTGCACAAAATGATAATT+GGG - chr1_4:60242136-60242155 Msa0174560:intron 30.0%
! ATTTGAGTGACTTGAAGTTT+TGG + chr1_4:60242295-60242314 None:intergenic 30.0%
! ACAAAATCTTTAAAAGAGGG+AGG + chr1_4:60242426-60242445 None:intergenic 30.0%
!! CCCTCTTTTAAAGATTTTGT+TGG - chr1_4:60242426-60242445 Msa0174560:intron 30.0%
TACTTATTCAACGGTACAAA+CGG - chr1_4:60243061-60243080 Msa0174560:intron 30.0%
! TTTAAAGTGCCCAAAAAAGA+CGG + chr1_4:60243149-60243168 None:intergenic 30.0%
! TTTGGGCACTTTAAAAATCA+TGG - chr1_4:60243154-60243173 Msa0174560:intron 30.0%
!! CACAAATTGGTCTTTGAATA+TGG - chr1_4:60243281-60243300 Msa0174560:intron 30.0%
!! TAAATTTTGGCATAAAGTGG+TGG - chr1_4:60243382-60243401 Msa0174560:intron 30.0%
AATTATGTGACGACATCTTA+GGG - chr1_4:60243849-60243868 Msa0174560:intron 30.0%
ATGACATTAATGAAGACAGT+GGG - chr1_4:60243888-60243907 Msa0174560:intron 30.0%
CTCTCTTGAAAAAACAATGA+AGG - chr1_4:60244337-60244356 Msa0174560:five_prime_UTR 30.0%
!! TGTTCTGGTTTGAATGTTTA+GGG - chr1_4:60244368-60244387 Msa0174560:five_prime_UTR 30.0%
AAAAAGGTAGCAATGTGTGT+GGG + chr1_4:60238884-60238903 None:intergenic 35.0%
TCATTCCTCAAACACTAACT+AGG - chr1_4:60239016-60239035 Msa0174560:CDS 35.0%
TACATTCAAGTCAATGGAGA+AGG - chr1_4:60239287-60239306 Msa0174560:CDS 35.0%
TACGACTGATTGTACATTGT+CGG - chr1_4:60239508-60239527 Msa0174560:CDS 35.0%
CATAATATATGCAAGGTCTG+GGG + chr1_4:60239636-60239655 None:intergenic 35.0%
GCATAATATATGCAAGGTCT+GGG + chr1_4:60239637-60239656 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+TGG + chr1_4:60239638-60239657 None:intergenic 35.0%
TTGAAGGATTATTAAGGTGC+GGG - chr1_4:60239720-60239739 Msa0174560:CDS 35.0%
! CAGATATGTTTCCTCTTTTG+AGG + chr1_4:60239787-60239806 None:intergenic 35.0%
GACATAGGCTAAATATACGT+GGG + chr1_4:60240156-60240175 None:intergenic 35.0%
AGACATAGGCTAAATATACG+TGG + chr1_4:60240157-60240176 None:intergenic 35.0%
!!! TTGCTTTTTCTAGGTTCTAC+TGG - chr1_4:60240413-60240432 Msa0174560:intron 35.0%
! TATCGTACGTACCTATGTTT+TGG - chr1_4:60240787-60240806 Msa0174560:intron 35.0%
TCACACCAAAAAGTTATTCC+TGG - chr1_4:60241133-60241152 Msa0174560:intron 35.0%
! CCAGTATAAGAATAGTTTGC+AGG + chr1_4:60241209-60241228 None:intergenic 35.0%
CCTGCAAACTATTCTTATAC+TGG - chr1_4:60241206-60241225 Msa0174560:intron 35.0%
!! TACTACTGTTGGCCTTTATT+AGG + chr1_4:60241359-60241378 None:intergenic 35.0%
GTAGTACTAATGAATAGGGT+TGG - chr1_4:60241373-60241392 Msa0174560:intron 35.0%
AAAAATTGTAAGCCTGAGTC+TGG - chr1_4:60241442-60241461 Msa0174560:intron 35.0%
CAAAACAATAGGCCTATGAA+AGG + chr1_4:60241475-60241494 None:intergenic 35.0%
TGCTTATATTAGTGACTGGA+GGG + chr1_4:60241613-60241632 None:intergenic 35.0%
TTGCTTATATTAGTGACTGG+AGG + chr1_4:60241614-60241633 None:intergenic 35.0%
AATGCTTGTCTACCACTATA+AGG - chr1_4:60241780-60241799 Msa0174560:intron 35.0%
AATAACATGCATAAACAGGC+CGG - chr1_4:60241927-60241946 Msa0174560:intron 35.0%
TAAGTAAATAGGTCAGGCTT+AGG + chr1_4:60241983-60242002 None:intergenic 35.0%
!! GCCTAGCCTTTTTAATAAAC+AGG - chr1_4:60242026-60242045 Msa0174560:intron 35.0%
! GCCTTTTTAATAAACAGGTC+AGG - chr1_4:60242031-60242050 Msa0174560:intron 35.0%
GCCTGACCTGTTTATTAAAA+AGG + chr1_4:60242035-60242054 None:intergenic 35.0%
CGTTTATCAATTCATCGGTA+GGG + chr1_4:60242119-60242138 None:intergenic 35.0%
ACGTTTATCAATTCATCGGT+AGG + chr1_4:60242120-60242139 None:intergenic 35.0%
GTGCACGTTTATCAATTCAT+CGG + chr1_4:60242124-60242143 None:intergenic 35.0%
CGTGCACAAAATGATAATTG+GGG - chr1_4:60242137-60242156 Msa0174560:intron 35.0%
!! ACTTGAAGTTTTGGTGACTT+TGG + chr1_4:60242286-60242305 None:intergenic 35.0%
AGTTGAATACTATTGTCAGC+AGG + chr1_4:60242332-60242351 None:intergenic 35.0%
! TTAAAGTGCCCAAAAAAGAC+GGG + chr1_4:60243148-60243167 None:intergenic 35.0%
! TTGGTCTTTGAATATGGGTT+TGG - chr1_4:60243287-60243306 Msa0174560:intron 35.0%
! ATTGGGTTTGTGTGATTTTC+AGG - chr1_4:60243474-60243493 Msa0174560:intron 35.0%
! AACTGTAGATTTTTCTGCTG+AGG + chr1_4:60243568-60243587 None:intergenic 35.0%
AACTATAGAGCCAAAGATCA+TGG - chr1_4:60243604-60243623 Msa0174560:intron 35.0%
! GTTTTACCACATTTACGCTT+AGG + chr1_4:60243641-60243660 None:intergenic 35.0%
AATGTGGTAAAACAAGTCGT+TGG - chr1_4:60243648-60243667 Msa0174560:intron 35.0%
ATGTGGTAAAACAAGTCGTT+GGG - chr1_4:60243649-60243668 Msa0174560:intron 35.0%
! GTAGCTTTTGTTCTTCTTCA+TGG + chr1_4:60243675-60243694 None:intergenic 35.0%
ACAACTTCACAATCTAGTGA+AGG + chr1_4:60243764-60243783 None:intergenic 35.0%
GAATTATGTGACGACATCTT+AGG - chr1_4:60243848-60243867 Msa0174560:intron 35.0%
GATGACATTAATGAAGACAG+TGG - chr1_4:60243887-60243906 Msa0174560:intron 35.0%
TGACATTAATGAAGACAGTG+GGG - chr1_4:60243889-60243908 Msa0174560:intron 35.0%
AAGTACTCATGTCAAGACAA+TGG - chr1_4:60243922-60243941 Msa0174560:intron 35.0%
GACAATGGAAAATTGTTTGC+TGG - chr1_4:60243937-60243956 Msa0174560:intron 35.0%
! AATTGTTTGCTGGAAACAAG+TGG - chr1_4:60243947-60243966 Msa0174560:intron 35.0%
! ATTGTTTGCTGGAAACAAGT+GGG - chr1_4:60243948-60243967 Msa0174560:intron 35.0%
AAGTCAAGAGAGAGAAATGA+TGG - chr1_4:60243985-60244004 Msa0174560:intron 35.0%
AGTCAAGAGAGAGAAATGAT+GGG - chr1_4:60243986-60244005 Msa0174560:intron 35.0%
GAAAGAACAACCAATGATGA+TGG - chr1_4:60244028-60244047 Msa0174560:CDS 35.0%
GTGAACCAAACCTCAAATAA+CGG - chr1_4:60244100-60244119 Msa0174560:CDS 35.0%
! TTTCACCGTTATTTGAGGTT+TGG + chr1_4:60244108-60244127 None:intergenic 35.0%
TGGAGAATGGTCTTTGAATA+TGG - chr1_4:60244129-60244148 Msa0174560:five_prime_UTR 35.0%
GGAGAATGGTCTTTGAATAT+GGG - chr1_4:60244130-60244149 Msa0174560:five_prime_UTR 35.0%
GTTGTGTGAAGATGATGATT+GGG - chr1_4:60244249-60244268 Msa0174560:intron 35.0%
GAAGGTGATAGTAAGAGTTT+GGG - chr1_4:60244271-60244290 Msa0174560:five_prime_UTR 35.0%
!! GTGTTCTGGTTTGAATGTTT+AGG - chr1_4:60244367-60244386 Msa0174560:five_prime_UTR 35.0%
TTGTAACAATGCTACGATCG+TGG + chr1_4:60238813-60238832 None:intergenic 40.0%
GCATTGTTACAAAACCAACG+TGG - chr1_4:60238821-60238840 Msa0174560:three_prime_UTR 40.0%
AAAAGGTAGCAATGTGTGTG+GGG + chr1_4:60238883-60238902 None:intergenic 40.0%
GAAAAAGGTAGCAATGTGTG+TGG + chr1_4:60238885-60238904 None:intergenic 40.0%
AGCTACCTAGTTAGTGTTTG+AGG + chr1_4:60239024-60239043 None:intergenic 40.0%
ACAACCACCGTCAAAAACAA+AGG - chr1_4:60239047-60239066 Msa0174560:CDS 40.0%
! ACTCCTTGTTGTGAGAAAGT+AGG - chr1_4:60239215-60239234 Msa0174560:CDS 40.0%
! CTCCTTGTTGTGAGAAAGTA+GGG - chr1_4:60239216-60239235 Msa0174560:CDS 40.0%
TGAGAAAGTAGGGCTGAAAA+GGG - chr1_4:60239226-60239245 Msa0174560:CDS 40.0%
AAGTCAATGGAGAAGGTTCT+TGG - chr1_4:60239294-60239313 Msa0174560:CDS 40.0%
CTACTCATACCTGCATTCTT+TGG + chr1_4:60239329-60239348 None:intergenic 40.0%
TGAGCTTAACTCAGTTGGTT+TGG + chr1_4:60239665-60239684 None:intergenic 40.0%
AACCAACTGAGTTAAGCTCA+CGG - chr1_4:60239665-60239684 Msa0174560:CDS 40.0%
!! CTCACGGCTTCATTTTTAAC+TGG - chr1_4:60239681-60239700 Msa0174560:CDS 40.0%
GGAAGAGTTGTAGACTAAGA+TGG - chr1_4:60239741-60239760 Msa0174560:CDS 40.0%
TTGAGAACTGACCTCAAAAG+AGG - chr1_4:60239773-60239792 Msa0174560:CDS 40.0%
AGGAAACATATCTGCTCAAG+AGG - chr1_4:60239793-60239812 Msa0174560:CDS 40.0%
TCCACACTACTTATGGTAAC+AGG - chr1_4:60239834-60239853 Msa0174560:intron 40.0%
ACCTGTTACCATAAGTAGTG+TGG + chr1_4:60239838-60239857 None:intergenic 40.0%
CAAATTTGAGAGTTGACCGT+AGG - chr1_4:60240247-60240266 Msa0174560:intron 40.0%
AACATAGGTACGTACGATAC+TGG + chr1_4:60240786-60240805 None:intergenic 40.0%
! CGGATCCAGGAATAACTTTT+TGG + chr1_4:60241141-60241160 None:intergenic 40.0%
! TTTCTGACACTCGTTTGTTG+AGG + chr1_4:60241166-60241185 None:intergenic 40.0%
!! TAACCAGTTATTTCTGCTGC+CGG - chr1_4:60241317-60241336 Msa0174560:intron 40.0%
AATAGGGTTGGGAATATGTC+AGG - chr1_4:60241385-60241404 Msa0174560:intron 40.0%
!!! TTTTTTTCGTAGGTCAGGCT+CGG + chr1_4:60241427-60241446 None:intergenic 40.0%
ATAGGCCTATGAAAGGCTAT+AGG + chr1_4:60241468-60241487 None:intergenic 40.0%
!!! ATAGGCCTATTGTTTTGACC+TGG - chr1_4:60241478-60241497 Msa0174560:intron 40.0%
TGTAAATAGGCTTTCAGGCT+AGG + chr1_4:60241526-60241545 None:intergenic 40.0%
TAGCCTGAAAGCCTATTTAC+AGG - chr1_4:60241525-60241544 Msa0174560:intron 40.0%
TTGCTTATATTAGTGACCGG+AGG - chr1_4:60241729-60241748 Msa0174560:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG - chr1_4:60241730-60241749 Msa0174560:intron 40.0%
!!! AGGCTTTTAAGGCCTTATAG+TGG + chr1_4:60241795-60241814 None:intergenic 40.0%
AAAAGCCTACGAAGCCTAAT+AGG + chr1_4:60241953-60241972 None:intergenic 40.0%
ATCAATTCATCGGTAGGGTT+GGG + chr1_4:60242114-60242133 None:intergenic 40.0%
TATCAATTCATCGGTAGGGT+TGG + chr1_4:60242115-60242134 None:intergenic 40.0%
TTGGGGTATATTTGTCCTAG+TGG - chr1_4:60242154-60242173 Msa0174560:intron 40.0%
TAGATCGAAACAAGACCACT+AGG + chr1_4:60242172-60242191 None:intergenic 40.0%
GTAGTTACGTTAGCATAGCT+CGG - chr1_4:60242992-60243011 Msa0174560:intron 40.0%
!!! AAAGTTGTCCCCGTCTTTTT+TGG - chr1_4:60243136-60243155 Msa0174560:intron 40.0%
!!! AAGTTGTCCCCGTCTTTTTT+GGG - chr1_4:60243137-60243156 Msa0174560:intron 40.0%
! TAAAGTGCCCAAAAAAGACG+GGG + chr1_4:60243147-60243166 None:intergenic 40.0%
CACCAAATTGTTAGGCATGT+GGG + chr1_4:60243199-60243218 None:intergenic 40.0%
TCACCAAATTGTTAGGCATG+TGG + chr1_4:60243200-60243219 None:intergenic 40.0%
TTTGGCATAAAGTGGTGGTA+CGG - chr1_4:60243387-60243406 Msa0174560:intron 40.0%
ATTTCATTGTCCGTTCTTCC+TGG + chr1_4:60243524-60243543 None:intergenic 40.0%
!! GATCTTTGGCTCTATAGTTG+TGG + chr1_4:60243603-60243622 None:intergenic 40.0%
TTACCACATTTACGCTTAGG+AGG + chr1_4:60243638-60243657 None:intergenic 40.0%
GTACGTGGAATTTGAACTTC+TGG + chr1_4:60243740-60243759 None:intergenic 40.0%
AAGACTGTCTCCATCATCAT+TGG + chr1_4:60244041-60244060 None:intergenic 40.0%
! TTTGGTTCACACTACTTTCG+GGG + chr1_4:60244090-60244109 None:intergenic 40.0%
! GTTTGGTTCACACTACTTTC+GGG + chr1_4:60244091-60244110 None:intergenic 40.0%
! GGTTTGGTTCACACTACTTT+CGG + chr1_4:60244092-60244111 None:intergenic 40.0%
ACCTCAAATAACGGTGAAAG+TGG - chr1_4:60244109-60244128 Msa0174560:exon 40.0%
TCCACTTTCACCGTTATTTG+AGG + chr1_4:60244113-60244132 None:intergenic 40.0%
ATAACGGTGAAAGTGGAGAA+TGG - chr1_4:60244116-60244135 Msa0174560:exon 40.0%
GGTTGTGTGAAGATGATGAT+TGG - chr1_4:60244248-60244267 Msa0174560:intron 40.0%
TGTGAAGATGATGATTGGGA+AGG - chr1_4:60244253-60244272 Msa0174560:intron 40.0%
GGAAGGTGATAGTAAGAGTT+TGG - chr1_4:60244270-60244289 Msa0174560:five_prime_UTR 40.0%
AATGAGACTAGACAACGAGG+TGG + chr1_4:60239001-60239020 None:intergenic 45.0%
AGGAATGAGACTAGACAACG+AGG + chr1_4:60239004-60239023 None:intergenic 45.0%
!!! GCTACCTTTGTTTTTGACGG+TGG + chr1_4:60239054-60239073 None:intergenic 45.0%
AGCCCTACTTTCTCACAACA+AGG + chr1_4:60239221-60239240 None:intergenic 45.0%
GTGAGAAAGTAGGGCTGAAA+AGG - chr1_4:60239225-60239244 Msa0174560:CDS 45.0%
GAGAAAGTAGGGCTGAAAAG+GGG - chr1_4:60239227-60239246 Msa0174560:CDS 45.0%
TCAATGGAGAAGGTTCTTGG+AGG - chr1_4:60239297-60239316 Msa0174560:CDS 45.0%
AGGTCATTGCCAAAGAATGC+AGG - chr1_4:60239317-60239336 Msa0174560:CDS 45.0%
AGTAGTGTGGAGCTTCACAA+TGG + chr1_4:60239825-60239844 None:intergenic 45.0%
GTGAAGCTCCACACTACTTA+TGG - chr1_4:60239827-60239846 Msa0174560:intron 45.0%
TTGACCGTAGGATGTGAGTA+TGG - chr1_4:60240259-60240278 Msa0174560:intron 45.0%
CATGCCATACTCACATCCTA+CGG + chr1_4:60240266-60240285 None:intergenic 45.0%
GGTTAAAAGTGAGAGCTTGC+CGG - chr1_4:60240580-60240599 Msa0174560:intron 45.0%
AATCCGGCAGCAGAAATAAC+TGG + chr1_4:60241323-60241342 None:intergenic 45.0%
ATGTCAGGCCAGACTTTGAT+AGG - chr1_4:60241400-60241419 Msa0174560:intron 45.0%
!!! TTTTTTCGTAGGTCAGGCTC+GGG + chr1_4:60241426-60241445 None:intergenic 45.0%
TCTGGCCTATAGCCTTTCAT+AGG - chr1_4:60241460-60241479 Msa0174560:intron 45.0%
TCAGGCCAGGTCAAAACAAT+AGG + chr1_4:60241486-60241505 None:intergenic 45.0%
! ACTTTTAGATAGGTCAGGCC+AGG + chr1_4:60241499-60241518 None:intergenic 45.0%
GCCTGACCTATCTAAAAGTC+TGG - chr1_4:60241500-60241519 Msa0174560:intron 45.0%
! GCCAGACTTTTAGATAGGTC+AGG + chr1_4:60241504-60241523 None:intergenic 45.0%
! GCTAGGCCAGACTTTTAGAT+AGG + chr1_4:60241509-60241528 None:intergenic 45.0%
AGGCCTGTAAATAGGCTTTC+AGG + chr1_4:60241531-60241550 None:intergenic 45.0%
CTATTGTCAGCAGGACGAAT+GGG + chr1_4:60242323-60242342 None:intergenic 45.0%
ACTATTGTCAGCAGGACGAA+TGG + chr1_4:60242324-60242343 None:intergenic 45.0%
TTACGTTAGCATAGCTCGGT+TGG - chr1_4:60242996-60243015 Msa0174560:intron 45.0%
TGCCCACATGCCTAACAATT+TGG - chr1_4:60243194-60243213 Msa0174560:intron 45.0%
!! GGGTTTGTGTGATTTTCAGG+TGG - chr1_4:60243477-60243496 Msa0174560:CDS 45.0%
TGCTGAGGTGAGAATTCCAA+TGG + chr1_4:60243553-60243572 None:intergenic 45.0%
GGACGAACATCCATGATCTT+TGG + chr1_4:60243617-60243636 None:intergenic 45.0%
! CAATCTAGTGAAGGAGTACG+TGG + chr1_4:60243755-60243774 None:intergenic 45.0%
!! GAGAGAGAAATGATGGGTGA+TGG - chr1_4:60243992-60244011 Msa0174560:intron 45.0%
!! AGAGAAATGATGGGTGATGG+AGG - chr1_4:60243995-60244014 Msa0174560:CDS 45.0%
! ATGGAATTGGGAGAGTGTGA+TGG - chr1_4:60244171-60244190 Msa0174560:intron 45.0%
!! AAATATATATTAATTATCAA+TGG - chr1_4:60242555-60242574 Msa0174560:intron 5.0%
CTAGACAACGAGGTGGAGAA+AGG + chr1_4:60238994-60239013 None:intergenic 50.0%
TAGGGCTGAAAAGGGGTAGA+TGG - chr1_4:60239234-60239253 Msa0174560:CDS 50.0%
AGCCGTGAGCTTAACTCAGT+TGG + chr1_4:60239670-60239689 None:intergenic 50.0%
TCATGTTAACCAGTGCCCCT+GGG + chr1_4:60240043-60240062 None:intergenic 50.0%
CGTAGGATGTGAGTATGGCA+TGG - chr1_4:60240264-60240283 Msa0174560:intron 50.0%
TGAGAGCTTGCCGGATACTA+CGG - chr1_4:60240589-60240608 Msa0174560:intron 50.0%
AACAGCTTCCCCGTAGTATC+CGG + chr1_4:60240602-60240621 None:intergenic 50.0%
! CCACGCATTTTGCAAGTGCT+GGG + chr1_4:60240645-60240664 None:intergenic 50.0%
! GACACTCGTTTGTTGAGGAG+CGG + chr1_4:60241161-60241180 None:intergenic 50.0%
AAAGGCTATAGGCCAGACTC+AGG + chr1_4:60241457-60241476 None:intergenic 50.0%
! TATTAGTGACCGGAGGGTGT+AGG - chr1_4:60241736-60241755 Msa0174560:intron 50.0%
!! GCTTTAAAGCCTACACCCTC+CGG + chr1_4:60241748-60241767 None:intergenic 50.0%
CATAAACAGGCCGGCCTATT+AGG - chr1_4:60241936-60241955 Msa0174560:intron 50.0%
!! TGGCTTGTTTAAGCCTGGTC+TGG + chr1_4:60242057-60242076 None:intergenic 50.0%
AGACCAGGCTTAAACAAGCC+AGG - chr1_4:60242056-60242075 Msa0174560:intron 50.0%
GCTTAAACAAGCCAGGTCGT+AGG - chr1_4:60242063-60242082 Msa0174560:intron 50.0%
TCATCGGTAGGGTTGGGAAT+AGG + chr1_4:60242108-60242127 None:intergenic 50.0%
! TGGCAAGTGGCTAGCTATCA+TGG + chr1_4:60243504-60243523 None:intergenic 50.0%
ATGATAGCTAGCCACTTGCC+AGG - chr1_4:60243503-60243522 Msa0174560:CDS 50.0%
TAGCCACTTGCCAGGAAGAA+CGG - chr1_4:60243511-60243530 Msa0174560:CDS 50.0%
CGTCCTCCTAAGCGTAAATG+TGG - chr1_4:60243632-60243651 Msa0174560:intron 50.0%
! ATGAAGGCATGAGCGTGTTC+TGG - chr1_4:60244353-60244372 Msa0174560:five_prime_UTR 50.0%
GGAAATGTTAACCGGTGCCC+CGG - chr1_4:60239892-60239911 Msa0174560:intron 55.0%
GAAATGTTAACCGGTGCCCC+GGG - chr1_4:60239893-60239912 Msa0174560:intron 55.0%
AAATGTTAACCGGTGCCCCG+GGG - chr1_4:60239894-60239913 Msa0174560:intron 55.0%
ACATCCTTAACCAGTGCCCC+CGG + chr1_4:60239914-60239933 None:intergenic 55.0%
ACTTCCTTAACCAGTGCCCC+AGG - chr1_4:60240023-60240042 Msa0174560:intron 55.0%
CTTCCTTAACCAGTGCCCCA+GGG - chr1_4:60240024-60240043 Msa0174560:intron 55.0%
TTCCTTAACCAGTGCCCCAG+GGG - chr1_4:60240025-60240044 Msa0174560:intron 55.0%
CATGTTAACCAGTGCCCCTG+GGG + chr1_4:60240042-60240061 None:intergenic 55.0%
GTCATGTTAACCAGTGCCCC+TGG + chr1_4:60240044-60240063 None:intergenic 55.0%
GAGAGCTTGCCGGATACTAC+GGG - chr1_4:60240590-60240609 Msa0174560:intron 55.0%
AGAGCTTGCCGGATACTACG+GGG - chr1_4:60240591-60240610 Msa0174560:intron 55.0%
CCCAGCACTTGCAAAATGCG+TGG - chr1_4:60240642-60240661 Msa0174560:intron 55.0%
! GCCACGCATTTTGCAAGTGC+TGG + chr1_4:60240646-60240665 None:intergenic 55.0%
! GTTTGTTGAGGAGCGGATCC+AGG + chr1_4:60241154-60241173 None:intergenic 55.0%
GCCTACGAAGCCTAATAGGC+CGG + chr1_4:60241949-60241968 None:intergenic 55.0%
TAAACAGGTCAGGCCAGACC+AGG - chr1_4:60242041-60242060 Msa0174560:intron 55.0%
!! CGACCTGGCTTGTTTAAGCC+TGG + chr1_4:60242062-60242081 None:intergenic 55.0%
ATAGGCTAGACCGGCCTACA+GGG + chr1_4:60242090-60242109 None:intergenic 55.0%
AATAGGCTAGACCGGCCTAC+AGG + chr1_4:60242091-60242110 None:intergenic 55.0%
GGGTTGGGAATAGGCTAGAC+CGG + chr1_4:60242099-60242118 None:intergenic 55.0%
TGTCCGTTCTTCCTGGCAAG+TGG + chr1_4:60243517-60243536 None:intergenic 55.0%
GGTGGCAGATTGTGCCACGT+TGG + chr1_4:60238838-60238857 None:intergenic 60.0%
AATGTTAACCGGTGCCCCGG+GGG - chr1_4:60239895-60239914 Msa0174560:intron 60.0%
ATCCTTAACCAGTGCCCCCG+GGG + chr1_4:60239912-60239931 None:intergenic 60.0%
CATCCTTAACCAGTGCCCCC+GGG + chr1_4:60239913-60239932 None:intergenic 60.0%
GGCTCGGGCCTATCAAAGTC+TGG + chr1_4:60241411-60241430 None:intergenic 60.0%
GCCGGCCTATTAGGCTTCGT+AGG - chr1_4:60241945-60241964 Msa0174560:intron 60.0%
TAGGCTAGACCGGCCTACAG+GGG + chr1_4:60242089-60242108 None:intergenic 60.0%
!! TGCCCCTGGGGCACTGGTTA+AGG + chr1_4:60240030-60240049 None:intergenic 65.0%
!! TGCCCCGGGGGCACTGGTTA+AGG - chr1_4:60239907-60239926 Msa0174560:intron 70.0%
! AACCAGTGCCCCAGGGGCAC+TGG - chr1_4:60240031-60240050 Msa0174560:intron 70.0%
AACCAGTGCCCCTGGGGCAC+TGG + chr1_4:60240036-60240055 None:intergenic 70.0%
GCCAGGTCGTAGGCCCCTGT+AGG - chr1_4:60242073-60242092 Msa0174560:intron 70.0%
GCCTACAGGGGCCTACGACC+TGG + chr1_4:60242077-60242096 None:intergenic 70.0%
GGTCGTAGGCCCCTGTAGGC+CGG - chr1_4:60242077-60242096 Msa0174560:intron 70.0%
AACCAGTGCCCCCGGGGCAC+CGG + chr1_4:60239906-60239925 None:intergenic 75.0%
!! AACCGGTGCCCCGGGGGCAC+TGG - chr1_4:60239901-60239920 Msa0174560:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 60238803 60244529 60238803 ID=Msa0174560;Name=Msa0174560
chr1_4 mRNA 60238803 60244529 60238803 ID=Msa0174560-mRNA-1;Parent=Msa0174560;Name=Msa0174560-mRNA-1;_AED=0.03;_eAED=0.03;_QI=300|1|1|1|0.66|0.5|4|184|370
chr1_4 exon 60238803 60239836 60238803 ID=Msa0174560-mRNA-1:exon:19043;Parent=Msa0174560-mRNA-1
chr1_4 exon 60243477 60243606 60243477 ID=Msa0174560-mRNA-1:exon:19042;Parent=Msa0174560-mRNA-1
chr1_4 exon 60243994 60244160 60243994 ID=Msa0174560-mRNA-1:exon:19041;Parent=Msa0174560-mRNA-1
chr1_4 exon 60244264 60244529 60244264 ID=Msa0174560-mRNA-1:exon:19040;Parent=Msa0174560-mRNA-1
chr1_4 five_prime_UTR 60244264 60244529 60244264 ID=Msa0174560-mRNA-1:five_prime_utr;Parent=Msa0174560-mRNA-1
chr1_4 five_prime_UTR 60244127 60244160 60244127 ID=Msa0174560-mRNA-1:five_prime_utr;Parent=Msa0174560-mRNA-1
chr1_4 CDS 60243994 60244126 60243994 ID=Msa0174560-mRNA-1:cds;Parent=Msa0174560-mRNA-1
chr1_4 CDS 60243477 60243606 60243477 ID=Msa0174560-mRNA-1:cds;Parent=Msa0174560-mRNA-1
chr1_4 CDS 60238987 60239836 60238987 ID=Msa0174560-mRNA-1:cds;Parent=Msa0174560-mRNA-1
chr1_4 three_prime_UTR 60238803 60238986 60238803 ID=Msa0174560-mRNA-1:three_prime_utr;Parent=Msa0174560-mRNA-1
Gene Sequence

>Msa0174560

ATGGGAAGAACTCCTTGTTGTGAGAAAGTAGGGCTGAAAAGGGGTAGATGGACAACAGAAGAAGATGAGATCTTGTCAAAATACATTCAAGTCAATGGAGAAGGTTCTTGGAGGTCATTGCCAAAGAATGCAGGATTATTAAGGTGCGGGAAGAGTTGTAGACTAAGATGGATTAACTATTTGAGAACTGACCTCAAAAGAGGAAACATATCTGCTCAAGAGGAAGACACCATTGTGAAGCTCCACACTACTTATGGTAACAGGTGGTCCATGATAGCTAGCCACTTGCCAGGAAGAACGGACAATGAAATTAAAAACCATTGGAATTCTCACCTCAGCAGAAAAATCTACAGTTTCTCAAAAATTTCCACAACTATAGAGCCAAAGATCATGGATGTTCGTCCTCCTAAGCGTAAATGTGGTAAAACAAGTCGTTGGGCCATGAAGAAGAACAAAAGCTACAAAAAACAAACCGTTATTAATACTAAAGAAAATTATATTGAACCAGAAGTTCAAATTCCACGTACTCCTTCACTAGATTGTGAAGTTGTTACAGAGAAAATAATTGATGACGTGGAGGTAAAAACAACACATGATGAGAAAGAAACAACGTATGAATTATGTGACGACATCTTAGGGCTGAGTGAGTTGTTAGATGACATTAATGAAGACAGTGGGGCATTGTGCATAAGTACTCATGTCAAGACAATGGAAAATTGTTTGCTGGAAACAAGTGGGTCTGTTTCAAATTTAAGTCAAGAGAGAGAAATGATGGGTGATGGAGGTGAAGAAAATGAAAGAACAACCAATGATGATGGAGACAGTCTTAAATATAATTTGGTTTCATGTGAAGACCCCGAAAGTAGTGTGAACCAAACCTCAAATAACGGTGAAAGTGGAGAATGGTCTTTGAATATGGGTTTAGATTTGGATGATAAATGGAATTGGGAGAGTGTGATGGAATTTAGTGTTGATGATAATAGTAATAGGGAGCATAAAGATAATCTTTTGAATTGGTTGTGTGAAGATGATGATTGGGAAGGTGATAGTAAGAGTTTGGGAGAGATAGATCCTCAGAAACAAAATGATTTGATTGCTTGGTTTCTCTCTTGA
Protein sequence

>Msa0174560

MGRTPCCEKVGLKRGRWTTEEDEILSKYIQVNGEGSWRSLPKNAGLLRCGKSCRLRWINYLRTDLKRGNISAQEEDTIVKLHTTYGNRWSMIASHLPGRTDNEIKNHWNSHLSRKIYSFSKISTTIEPKIMDVRPPKRKCGKTSRWAMKKNKSYKKQTVINTKENYIEPEVQIPRTPSLDCEVVTEKIIDDVEVKTTHDEKETTYELCDDILGLSELLDDINEDSGALCISTHVKTMENCLLETSGSVSNLSQEREMMGDGGEENERTTNDDGDSLKYNLVSCEDPESSVNQTSNNGESGEWSLNMGLDLDDKWNWESVMEFSVDDNSNREHKDNLLNWLCEDDDWEGDSKSLGEIDPQKQNDLIAWFLS*