Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46798.t1 | AFK43236.1 | 98.6 | 147 | 2 | 0 | 97 | 243 | 95 | 241 | 2.80E-77 | 298.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46798.t1 | P82658 | 78.8 | 146 | 31 | 0 | 97 | 242 | 81 | 226 | 2.7e-65 | 250.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46798.t1 | G7IWL6 | 98.6 | 147 | 2 | 0 | 97 | 243 | 96 | 242 | 2.0e-77 | 298.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene46798 | 0.829764 | 4.29E-55 | -1.69E-46 |
| MS.gene049171 | MS.gene46798 | 0.861226 | 1.19E-63 | -1.69E-46 |
| MS.gene049173 | MS.gene46798 | 0.867404 | 1.40E-65 | -1.69E-46 |
| MS.gene049217 | MS.gene46798 | 0.87878 | 2.13E-69 | -1.69E-46 |
| MS.gene049222 | MS.gene46798 | 0.875332 | 3.35E-68 | -1.69E-46 |
| MS.gene049232 | MS.gene46798 | 0.811457 | 6.94E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene46798 | 0.892368 | 1.69E-74 | -1.69E-46 |
| MS.gene049320 | MS.gene46798 | 0.895871 | 6.34E-76 | -1.69E-46 |
| MS.gene049369 | MS.gene46798 | 0.828444 | 8.96E-55 | -1.69E-46 |
| MS.gene049427 | MS.gene46798 | 0.876517 | 1.31E-68 | -1.69E-46 |
| MS.gene049609 | MS.gene46798 | 0.873029 | 2.02E-67 | -1.69E-46 |
| MS.gene049614 | MS.gene46798 | 0.835942 | 1.25E-56 | -1.69E-46 |
| MS.gene049615 | MS.gene46798 | 0.801608 | 8.31E-49 | -1.69E-46 |
| MS.gene049627 | MS.gene46798 | 0.820379 | 7.07E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene46798 | 0.82526 | 5.16E-54 | -1.69E-46 |
| MS.gene049661 | MS.gene46798 | 0.818454 | 1.94E-52 | -1.69E-46 |
| MS.gene049662 | MS.gene46798 | 0.803501 | 3.38E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene46798 | 0.871408 | 6.99E-67 | -1.69E-46 |
| MS.gene049828 | MS.gene46798 | 0.806455 | 8.16E-50 | -1.69E-46 |
| MS.gene050076 | MS.gene46798 | 0.813693 | 2.25E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene46798 | 0.816802 | 4.58E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene46798 | 0.888717 | 4.61E-73 | -1.69E-46 |
| MS.gene050165 | MS.gene46798 | 0.870631 | 1.26E-66 | -1.69E-46 |
| MS.gene050323 | MS.gene46798 | 0.801346 | 9.40E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene46798 | 0.869289 | 3.46E-66 | -1.69E-46 |
| MS.gene050353 | MS.gene46798 | -0.802361 | 5.82E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene46798 | 0.851344 | 9.43E-61 | -1.69E-46 |
| MS.gene050444 | MS.gene46798 | 0.831767 | 1.38E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene46798 | 0.862535 | 4.73E-64 | -1.69E-46 |
| MS.gene050518 | MS.gene46798 | 0.857146 | 1.99E-62 | -1.69E-46 |
| MS.gene050538 | MS.gene46798 | 0.819925 | 8.99E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene46798 | 0.817627 | 2.99E-52 | -1.69E-46 |
| MS.gene050593 | MS.gene46798 | 0.844766 | 6.17E-59 | -1.69E-46 |
| MS.gene050612 | MS.gene46798 | 0.855291 | 6.96E-62 | -1.69E-46 |
| MS.gene050662 | MS.gene46798 | 0.808632 | 2.82E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene46798 | 0.835511 | 1.61E-56 | -1.69E-46 |
| MS.gene050686 | MS.gene46798 | 0.841343 | 5.03E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene46798 | 0.85814 | 1.01E-62 | -1.69E-46 |
| MS.gene050747 | MS.gene46798 | 0.849394 | 3.33E-60 | -1.69E-46 |
| MS.gene050767 | MS.gene46798 | 0.875453 | 3.05E-68 | -1.69E-46 |
| MS.gene050770 | MS.gene46798 | 0.878101 | 3.69E-69 | -1.69E-46 |
| MS.gene050772 | MS.gene46798 | 0.904809 | 8.33E-80 | -1.69E-46 |
| MS.gene05080 | MS.gene46798 | 0.806731 | 7.13E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene46798 | 0.808765 | 2.64E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene46798 | 0.806268 | 8.93E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene46798 | 0.846781 | 1.75E-59 | -1.69E-46 |
| MS.gene050986 | MS.gene46798 | 0.835716 | 1.43E-56 | -1.69E-46 |
| MS.gene05100 | MS.gene46798 | 0.876924 | 9.48E-69 | -1.69E-46 |
| MS.gene05101 | MS.gene46798 | 0.827142 | 1.84E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene46798 | 0.82295 | 1.80E-53 | -1.69E-46 |
| MS.gene051228 | MS.gene46798 | 0.876069 | 1.87E-68 | -1.69E-46 |
| MS.gene051387 | MS.gene46798 | 0.826815 | 2.21E-54 | -1.69E-46 |
| MS.gene051434 | MS.gene46798 | 0.804065 | 2.58E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene46798 | 0.847456 | 1.14E-59 | -1.69E-46 |
| MS.gene051666 | MS.gene46798 | 0.897491 | 1.34E-76 | -1.69E-46 |
| MS.gene051692 | MS.gene46798 | 0.893397 | 6.53E-75 | -1.69E-46 |
| MS.gene051694 | MS.gene46798 | 0.856233 | 3.69E-62 | -1.69E-46 |
| MS.gene051810 | MS.gene46798 | 0.878856 | 2.00E-69 | -1.69E-46 |
| MS.gene051858 | MS.gene46798 | 0.893074 | 8.81E-75 | -1.69E-46 |
| MS.gene051949 | MS.gene46798 | 0.862195 | 6.02E-64 | -1.69E-46 |
| MS.gene052164 | MS.gene46798 | 0.826962 | 2.03E-54 | -1.69E-46 |
| MS.gene052271 | MS.gene46798 | 0.893605 | 5.38E-75 | -1.69E-46 |
| MS.gene052290 | MS.gene46798 | 0.853811 | 1.87E-61 | -1.69E-46 |
| MS.gene052310 | MS.gene46798 | 0.809609 | 1.74E-50 | -1.69E-46 |
| MS.gene052322 | MS.gene46798 | 0.833627 | 4.79E-56 | -1.69E-46 |
| MS.gene052326 | MS.gene46798 | 0.806296 | 8.81E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene46798 | 0.874446 | 6.71E-68 | -1.69E-46 |
| MS.gene052421 | MS.gene46798 | 0.83022 | 3.32E-55 | -1.69E-46 |
| MS.gene052481 | MS.gene46798 | 0.820081 | 8.28E-53 | -1.69E-46 |
| MS.gene052484 | MS.gene46798 | 0.84608 | 2.72E-59 | -1.69E-46 |
| MS.gene052485 | MS.gene46798 | 0.804484 | 2.11E-49 | -1.69E-46 |
| MS.gene052501 | MS.gene46798 | 0.80223 | 6.19E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene46798 | 0.815751 | 7.87E-52 | -1.69E-46 |
| MS.gene052506 | MS.gene46798 | 0.816801 | 4.59E-52 | -1.69E-46 |
| MS.gene052510 | MS.gene46798 | 0.81687 | 4.42E-52 | -1.69E-46 |
| MS.gene052615 | MS.gene46798 | 0.846479 | 2.12E-59 | -1.69E-46 |
| MS.gene052822 | MS.gene46798 | 0.828621 | 8.12E-55 | -1.69E-46 |
| MS.gene052823 | MS.gene46798 | 0.804151 | 2.48E-49 | -1.69E-46 |
| MS.gene052825 | MS.gene46798 | 0.804582 | 2.02E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene46798 | 0.849673 | 2.78E-60 | -1.69E-46 |
| MS.gene052872 | MS.gene46798 | 0.850913 | 1.25E-60 | -1.69E-46 |
| MS.gene052916 | MS.gene46798 | 0.862282 | 5.66E-64 | -1.69E-46 |
| MS.gene052966 | MS.gene46798 | 0.813525 | 2.45E-51 | -1.69E-46 |
| MS.gene053009 | MS.gene46798 | 0.876203 | 1.68E-68 | -1.69E-46 |
| MS.gene053103 | MS.gene46798 | 0.859886 | 3.03E-63 | -1.69E-46 |
| MS.gene053104 | MS.gene46798 | 0.887493 | 1.36E-72 | -1.69E-46 |
| MS.gene053107 | MS.gene46798 | 0.82435 | 8.47E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene46798 | 0.823193 | 1.58E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene46798 | 0.879303 | 1.39E-69 | -1.69E-46 |
| MS.gene053209 | MS.gene46798 | 0.813561 | 2.40E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene46798 | 0.901057 | 3.93E-78 | -1.69E-46 |
| MS.gene053286 | MS.gene46798 | 0.896391 | 3.86E-76 | -1.69E-46 |
| MS.gene053322 | MS.gene46798 | 0.910345 | 2.08E-82 | -1.69E-46 |
| MS.gene053384 | MS.gene46798 | 0.829585 | 4.74E-55 | -1.69E-46 |
| MS.gene053436 | MS.gene46798 | 0.824424 | 8.13E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene46798 | 0.823031 | 1.72E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene46798 | 0.866032 | 3.83E-65 | -1.69E-46 |
| MS.gene053632 | MS.gene46798 | 0.876886 | 9.77E-69 | -1.69E-46 |
| MS.gene053813 | MS.gene46798 | 0.82676 | 2.27E-54 | -1.69E-46 |
| MS.gene053824 | MS.gene46798 | 0.844959 | 5.47E-59 | -1.69E-46 |
| MS.gene053916 | MS.gene46798 | 0.859795 | 3.23E-63 | -1.69E-46 |
| MS.gene054376 | MS.gene46798 | 0.854542 | 1.15E-61 | -1.69E-46 |
| MS.gene054408 | MS.gene46798 | 0.82615 | 3.18E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene46798 | 0.823536 | 1.31E-53 | -1.69E-46 |
| MS.gene054600 | MS.gene46798 | 0.88462 | 1.64E-71 | -1.69E-46 |
| MS.gene054642 | MS.gene46798 | 0.917597 | 4.37E-86 | -1.69E-46 |
| MS.gene054802 | MS.gene46798 | 0.854817 | 9.56E-62 | -1.69E-46 |
| MS.gene054803 | MS.gene46798 | 0.852253 | 5.21E-61 | -1.69E-46 |
| MS.gene054804 | MS.gene46798 | 0.856784 | 2.55E-62 | -1.69E-46 |
| MS.gene054927 | MS.gene46798 | 0.813877 | 2.05E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene46798 | 0.858034 | 1.09E-62 | -1.69E-46 |
| MS.gene054955 | MS.gene46798 | 0.804053 | 2.60E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene46798 | 0.871585 | 6.11E-67 | -1.69E-46 |
| MS.gene055206 | MS.gene46798 | 0.87532 | 3.38E-68 | -1.69E-46 |
| MS.gene055212 | MS.gene46798 | 0.861037 | 1.36E-63 | -1.69E-46 |
| MS.gene055224 | MS.gene46798 | 0.819376 | 1.20E-52 | -1.69E-46 |
| MS.gene055254 | MS.gene46798 | 0.843496 | 1.35E-58 | -1.69E-46 |
| MS.gene055289 | MS.gene46798 | 0.843228 | 1.59E-58 | -1.69E-46 |
| MS.gene055362 | MS.gene46798 | 0.890786 | 7.19E-74 | -1.69E-46 |
| MS.gene055397 | MS.gene46798 | 0.890065 | 1.38E-73 | -1.69E-46 |
| MS.gene055412 | MS.gene46798 | 0.819088 | 1.40E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene46798 | 0.887343 | 1.55E-72 | -1.69E-46 |
| MS.gene055502 | MS.gene46798 | 0.862845 | 3.80E-64 | -1.69E-46 |
| MS.gene055577 | MS.gene46798 | 0.865094 | 7.58E-65 | -1.69E-46 |
| MS.gene055636 | MS.gene46798 | 0.854358 | 1.30E-61 | -1.69E-46 |
| MS.gene055638 | MS.gene46798 | 0.837983 | 3.77E-57 | -1.69E-46 |
| MS.gene055647 | MS.gene46798 | 0.883966 | 2.87E-71 | -1.69E-46 |
| MS.gene055722 | MS.gene46798 | 0.923475 | 2.53E-89 | -1.69E-46 |
| MS.gene055748 | MS.gene46798 | 0.813073 | 3.08E-51 | -1.69E-46 |
| MS.gene055750 | MS.gene46798 | 0.810072 | 1.38E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene46798 | 0.811384 | 7.19E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene46798 | 0.890515 | 9.19E-74 | -1.69E-46 |
| MS.gene055941 | MS.gene46798 | 0.865996 | 3.94E-65 | -1.69E-46 |
| MS.gene055956 | MS.gene46798 | -0.831456 | 1.65E-55 | -1.69E-46 |
| MS.gene056083 | MS.gene46798 | 0.879686 | 1.02E-69 | -1.69E-46 |
| MS.gene056374 | MS.gene46798 | 0.936828 | 9.29E-98 | -1.69E-46 |
| MS.gene056409 | MS.gene46798 | 0.818912 | 1.53E-52 | -1.69E-46 |
| MS.gene056410 | MS.gene46798 | 0.822222 | 2.66E-53 | -1.69E-46 |
| MS.gene056448 | MS.gene46798 | 0.824354 | 8.45E-54 | -1.69E-46 |
| MS.gene056449 | MS.gene46798 | 0.809093 | 2.24E-50 | -1.69E-46 |
| MS.gene056487 | MS.gene46798 | 0.836439 | 9.35E-57 | -1.69E-46 |
| MS.gene056504 | MS.gene46798 | 0.829659 | 4.55E-55 | -1.69E-46 |
| MS.gene056510 | MS.gene46798 | 0.841853 | 3.69E-58 | -1.69E-46 |
| MS.gene056511 | MS.gene46798 | 0.813706 | 2.24E-51 | -1.69E-46 |
| MS.gene056549 | MS.gene46798 | 0.856649 | 2.79E-62 | -1.69E-46 |
| MS.gene056609 | MS.gene46798 | 0.845707 | 3.43E-59 | -1.69E-46 |
| MS.gene056610 | MS.gene46798 | 0.801294 | 9.64E-49 | -1.69E-46 |
| MS.gene056611 | MS.gene46798 | 0.815328 | 9.78E-52 | -1.69E-46 |
| MS.gene05664 | MS.gene46798 | 0.819767 | 9.77E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene46798 | 0.89881 | 3.68E-77 | -1.69E-46 |
| MS.gene05666 | MS.gene46798 | 0.820538 | 6.51E-53 | -1.69E-46 |
| MS.gene056692 | MS.gene46798 | 0.826231 | 3.04E-54 | -1.69E-46 |
| MS.gene056897 | MS.gene46798 | 0.866224 | 3.33E-65 | -1.69E-46 |
| MS.gene056946 | MS.gene46798 | 0.820467 | 6.76E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene46798 | 0.858218 | 9.58E-63 | -1.69E-46 |
| MS.gene057076 | MS.gene46798 | 0.816337 | 5.82E-52 | -1.69E-46 |
| MS.gene057123 | MS.gene46798 | 0.804976 | 1.67E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene46798 | 0.918126 | 2.29E-86 | -1.69E-46 |
| MS.gene057146 | MS.gene46798 | 0.845906 | 3.03E-59 | -1.69E-46 |
| MS.gene057196 | MS.gene46798 | 0.805388 | 1.37E-49 | -1.69E-46 |
| MS.gene057246 | MS.gene46798 | 0.818882 | 1.55E-52 | -1.69E-46 |
| MS.gene057285 | MS.gene46798 | 0.807345 | 5.29E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene46798 | 0.847168 | 1.37E-59 | -1.69E-46 |
| MS.gene057331 | MS.gene46798 | 0.888724 | 4.58E-73 | -1.69E-46 |
| MS.gene05735 | MS.gene46798 | 0.825184 | 5.38E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene46798 | 0.901708 | 2.04E-78 | -1.69E-46 |
| MS.gene057658 | MS.gene46798 | 0.830315 | 3.15E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene46798 | 0.82603 | 3.39E-54 | -1.69E-46 |
| MS.gene057775 | MS.gene46798 | 0.804085 | 2.56E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene46798 | 0.812801 | 3.53E-51 | -1.69E-46 |
| MS.gene057856 | MS.gene46798 | 0.821408 | 4.10E-53 | -1.69E-46 |
| MS.gene057857 | MS.gene46798 | 0.805839 | 1.10E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene46798 | 0.883472 | 4.36E-71 | -1.69E-46 |
| MS.gene058006 | MS.gene46798 | 0.848315 | 6.63E-60 | -1.69E-46 |
| MS.gene058019 | MS.gene46798 | 0.86104 | 1.36E-63 | -1.69E-46 |
| MS.gene058130 | MS.gene46798 | 0.803295 | 3.73E-49 | -1.69E-46 |
| MS.gene058293 | MS.gene46798 | 0.831471 | 1.64E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene46798 | 0.878061 | 3.81E-69 | -1.69E-46 |
| MS.gene058338 | MS.gene46798 | 0.808446 | 3.09E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene46798 | 0.800642 | 1.31E-48 | -1.69E-46 |
| MS.gene058419 | MS.gene46798 | 0.898793 | 3.74E-77 | -1.69E-46 |
| MS.gene058459 | MS.gene46798 | 0.814216 | 1.72E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene46798 | 0.85944 | 4.13E-63 | -1.69E-46 |
| MS.gene058660 | MS.gene46798 | 0.841169 | 5.59E-58 | -1.69E-46 |
| MS.gene058723 | MS.gene46798 | 0.896216 | 4.57E-76 | -1.69E-46 |
| MS.gene058773 | MS.gene46798 | 0.876965 | 9.18E-69 | -1.69E-46 |
| MS.gene058838 | MS.gene46798 | 0.83904 | 2.01E-57 | -1.69E-46 |
| MS.gene05883 | MS.gene46798 | 0.834567 | 2.78E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene46798 | 0.877325 | 6.88E-69 | -1.69E-46 |
| MS.gene059023 | MS.gene46798 | 0.847087 | 1.44E-59 | -1.69E-46 |
| MS.gene059029 | MS.gene46798 | 0.868304 | 7.21E-66 | -1.69E-46 |
| MS.gene05913 | MS.gene46798 | 0.859473 | 4.04E-63 | -1.69E-46 |
| MS.gene05934 | MS.gene46798 | 0.86335 | 2.65E-64 | -1.69E-46 |
| MS.gene059367 | MS.gene46798 | 0.806625 | 7.51E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene46798 | 0.88683 | 2.43E-72 | -1.69E-46 |
| MS.gene059676 | MS.gene46798 | 0.807371 | 5.22E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene46798 | 0.878141 | 3.57E-69 | -1.69E-46 |
| MS.gene059688 | MS.gene46798 | 0.826867 | 2.14E-54 | -1.69E-46 |
| MS.gene059692 | MS.gene46798 | 0.82167 | 3.57E-53 | -1.69E-46 |
| MS.gene059695 | MS.gene46798 | 0.82333 | 1.47E-53 | -1.69E-46 |
| MS.gene059711 | MS.gene46798 | 0.816565 | 5.18E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene46798 | 0.889557 | 2.18E-73 | -1.69E-46 |
| MS.gene059756 | MS.gene46798 | 0.835695 | 1.45E-56 | -1.69E-46 |
| MS.gene059801 | MS.gene46798 | 0.82775 | 1.32E-54 | -1.69E-46 |
| MS.gene059858 | MS.gene46798 | 0.825314 | 5.01E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene46798 | 0.840757 | 7.17E-58 | -1.69E-46 |
| MS.gene059902 | MS.gene46798 | 0.890003 | 1.46E-73 | -1.69E-46 |
| MS.gene059960 | MS.gene46798 | 0.891378 | 4.20E-74 | -1.69E-46 |
| MS.gene060193 | MS.gene46798 | 0.872783 | 2.44E-67 | -1.69E-46 |
| MS.gene060341 | MS.gene46798 | 0.838651 | 2.53E-57 | -1.69E-46 |
| MS.gene060356 | MS.gene46798 | 0.814853 | 1.25E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene46798 | 0.817695 | 2.89E-52 | -1.69E-46 |
| MS.gene060469 | MS.gene46798 | 0.802858 | 4.60E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene46798 | 0.859426 | 4.17E-63 | -1.69E-46 |
| MS.gene060703 | MS.gene46798 | 0.836455 | 9.27E-57 | -1.69E-46 |
| MS.gene060727 | MS.gene46798 | 0.822771 | 1.98E-53 | -1.69E-46 |
| MS.gene060728 | MS.gene46798 | 0.821038 | 4.99E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene46798 | 0.866802 | 2.18E-65 | -1.69E-46 |
| MS.gene06077 | MS.gene46798 | 0.836646 | 8.28E-57 | -1.69E-46 |
| MS.gene060804 | MS.gene46798 | 0.901723 | 2.01E-78 | -1.69E-46 |
| MS.gene060818 | MS.gene46798 | 0.870638 | 1.25E-66 | -1.69E-46 |
| MS.gene060835 | MS.gene46798 | 0.829975 | 3.81E-55 | -1.69E-46 |
| MS.gene060837 | MS.gene46798 | 0.85447 | 1.20E-61 | -1.69E-46 |
| MS.gene06092 | MS.gene46798 | 0.855587 | 5.71E-62 | -1.69E-46 |
| MS.gene060982 | MS.gene46798 | 0.814242 | 1.70E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene46798 | 0.867775 | 1.07E-65 | -1.69E-46 |
| MS.gene061051 | MS.gene46798 | -0.817127 | 3.87E-52 | -1.69E-46 |
| MS.gene061134 | MS.gene46798 | 0.844099 | 9.32E-59 | -1.69E-46 |
| MS.gene061150 | MS.gene46798 | 0.891565 | 3.54E-74 | -1.69E-46 |
| MS.gene061171 | MS.gene46798 | 0.822366 | 2.46E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene46798 | 0.91221 | 2.53E-83 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46798.t1 | MTR_3g028150 | 92.958 | 213 | 13 | 1 | 31 | 243 | 32 | 242 | 6.94e-138 | 387 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46798.t1 | AT3G63540 | 78.261 | 138 | 30 | 0 | 105 | 242 | 3 | 140 | 3.78e-82 | 242 |
Find 46 sgRNAs with CRISPR-Local
Find 54 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATATTTAACTTTCCTTTC+TGG | 0.121727 | 3.3:-20693531 | MS.gene46798:CDS |
| TCTTTCTCTGTTCTCTTCTT+TGG | 0.152693 | 3.3:+20693552 | None:intergenic |
| GGCGGCGGAGGAGGAGAAAA+TGG | 0.222541 | 3.3:+20693914 | None:intergenic |
| AAACGTTCCTTCCAACCTTC+TGG | 0.272048 | 3.3:+20693627 | None:intergenic |
| AATATTTAACTTTCCTTTCT+GGG | 0.289515 | 3.3:-20693530 | MS.gene46798:CDS |
| TTAATATCAAAAGTTGAAAA+AGG | 0.291067 | 3.3:-20693606 | MS.gene46798:CDS |
| GGTGGTGGTGGCGGCGGAGG+AGG | 0.295244 | 3.3:+20693905 | None:intergenic |
| TTCTGCTGAGTCTTTCTTGT+TGG | 0.307382 | 3.3:+20693665 | None:intergenic |
| GGTGGTGGTGGTGGCGGCGG+AGG | 0.354249 | 3.3:+20693902 | None:intergenic |
| TGTGGAGGTTGTTGTGGTGG+TGG | 0.388270 | 3.3:+20693887 | None:intergenic |
| GGTTGTTGTGGTGGTGGTGG+TGG | 0.401000 | 3.3:+20693893 | None:intergenic |
| GGAGGTTGTTGTGGTGGTGG+TGG | 0.402045 | 3.3:+20693890 | None:intergenic |
| GTTAAGGTGGTGGTTATTAG+AGG | 0.416358 | 3.3:+20693819 | None:intergenic |
| GGTGGTTGTGGAGGTTGTTG+TGG | 0.419764 | 3.3:+20693881 | None:intergenic |
| TTGTTCAAAACAGCATCTTT+TGG | 0.430262 | 3.3:+20693492 | None:intergenic |
| TATTATGTTTATGAGATTGA+TGG | 0.453881 | 3.3:-20693378 | MS.gene46798:CDS |
| GGTTGTGGAGGTTGTTGTGG+TGG | 0.476092 | 3.3:+20693884 | None:intergenic |
| AGGAGATGATTCTGCTGCTA+TGG | 0.480110 | 3.3:+20693749 | None:intergenic |
| GAAGAAGTGAAAGATGATAA+AGG | 0.482410 | 3.3:-20693408 | MS.gene46798:CDS |
| TCTTTATTCCACTCAGGAGT+AGG | 0.485770 | 3.3:+20693285 | None:intergenic |
| GTACCGTAGTAGAGATTGTA+AGG | 0.491822 | 3.3:+20693729 | None:intergenic |
| GCGGCGGAGGAGGAGAAAAT+GGG | 0.496977 | 3.3:+20693915 | None:intergenic |
| GCAGCAAACTACGGCGGCTA+CGG | 0.501712 | 3.3:-20693696 | MS.gene46798:CDS |
| AGGTGGTGATGTTGTGAGAA+TGG | 0.508602 | 3.3:+20693773 | None:intergenic |
| AATTTGCAAGATATTATTAG+TGG | 0.515902 | 3.3:-20693450 | MS.gene46798:CDS |
| TCCTTATCTTTATTCCACTC+AGG | 0.519893 | 3.3:+20693279 | None:intergenic |
| TGATATGGTGGTGGTTGTGG+AGG | 0.520434 | 3.3:+20693872 | None:intergenic |
| TTGTGTTTGAATGAGATAAG+AGG | 0.520933 | 3.3:+20693846 | None:intergenic |
| TGCTGCTGCTGTTAAGGTGG+TGG | 0.525546 | 3.3:+20693809 | None:intergenic |
| TCCTGAGTGGAATAAAGATA+AGG | 0.526998 | 3.3:-20693280 | MS.gene46798:CDS |
| TGCTGCTGCTGCTGTTAAGG+TGG | 0.548707 | 3.3:+20693806 | None:intergenic |
| TCTACGACGTTCCAGAAGGT+TGG | 0.565732 | 3.3:-20693638 | MS.gene46798:CDS |
| GCGGAGGAGGAGAAAATGGG+TGG | 0.566411 | 3.3:+20693918 | None:intergenic |
| GCAAACTACGGCGGCTACGG+CGG | 0.573351 | 3.3:-20693693 | MS.gene46798:CDS |
| GAGGAGGAGAAAATGGGTGG+TGG | 0.579804 | 3.3:+20693921 | None:intergenic |
| CGACGTTCCAGAAGGTTGGA+AGG | 0.585452 | 3.3:-20693634 | MS.gene46798:CDS |
| GCAGCAAGTGCAGCAAACTA+CGG | 0.594999 | 3.3:-20693705 | MS.gene46798:CDS |
| TCTCCTTACAATCTCTACTA+CGG | 0.600009 | 3.3:-20693732 | MS.gene46798:CDS |
| GATGATTCTGCTGCTATGGA+AGG | 0.605999 | 3.3:+20693753 | None:intergenic |
| GCAAGTGCAGCAAACTACGG+CGG | 0.619443 | 3.3:-20693702 | MS.gene46798:CDS |
| TACATCTACGACGTTCCAGA+AGG | 0.628307 | 3.3:-20693642 | MS.gene46798:CDS |
| CTAACTGACGAAACCCAGAA+AGG | 0.634618 | 3.3:+20693517 | None:intergenic |
| TTAATGCTCCTACTCCTGAG+TGG | 0.644053 | 3.3:-20693293 | MS.gene46798:CDS |
| GATTCTGCTGCTATGGAAGG+TGG | 0.667537 | 3.3:+20693756 | None:intergenic |
| TGGTGATGTTGTGAGAATGG+TGG | 0.683595 | 3.3:+20693776 | None:intergenic |
| TGGTGATGATGAGAAAATTG+TGG | 0.687506 | 3.3:+20693941 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATCAAAAGTTGAAAA+AGG | - | chr3.3:20693575-20693594 | MS.gene46798:CDS | 15.0% |
| !! | AATTTGCAAGATATTATTAG+TGG | - | chr3.3:20693731-20693750 | MS.gene46798:CDS | 20.0% |
| !! | TATTATGTTTATGAGATTGA+TGG | - | chr3.3:20693803-20693822 | MS.gene46798:CDS | 20.0% |
| !!! | AATATTTAACTTTCCTTTCT+GGG | - | chr3.3:20693651-20693670 | MS.gene46798:CDS | 20.0% |
| !! | AAAGTTGAAAAAGGTACAAA+TGG | - | chr3.3:20693584-20693603 | MS.gene46798:CDS | 25.0% |
| !! | GAATATTTAACTTTCCTTTC+TGG | - | chr3.3:20693650-20693669 | MS.gene46798:CDS | 25.0% |
| GAAGAAGTGAAAGATGATAA+AGG | - | chr3.3:20693773-20693792 | MS.gene46798:CDS | 30.0% | |
| TTGTGTTTGAATGAGATAAG+AGG | + | chr3.3:20693338-20693357 | None:intergenic | 30.0% | |
| ! | TTGTTCAAAACAGCATCTTT+TGG | + | chr3.3:20693692-20693711 | None:intergenic | 30.0% |
| !! | TGAGATAAGAGGTTTTGATA+TGG | + | chr3.3:20693327-20693346 | None:intergenic | 30.0% |
| TCCTGAGTGGAATAAAGATA+AGG | - | chr3.3:20693901-20693920 | MS.gene46798:CDS | 35.0% | |
| TCCTTATCTTTATTCCACTC+AGG | + | chr3.3:20693905-20693924 | None:intergenic | 35.0% | |
| TCTCCTTACAATCTCTACTA+CGG | - | chr3.3:20693449-20693468 | MS.gene46798:CDS | 35.0% | |
| TCTTTCTCTGTTCTCTTCTT+TGG | + | chr3.3:20693632-20693651 | None:intergenic | 35.0% | |
| ! | TGGTGATGATGAGAAAATTG+TGG | + | chr3.3:20693243-20693262 | None:intergenic | 35.0% |
| !! | GATAAGAGGTTTTGATATGG+TGG | + | chr3.3:20693324-20693343 | None:intergenic | 35.0% |
| GTACCGTAGTAGAGATTGTA+AGG | + | chr3.3:20693455-20693474 | None:intergenic | 40.0% | |
| TCTTTATTCCACTCAGGAGT+AGG | + | chr3.3:20693899-20693918 | None:intergenic | 40.0% | |
| TTCTGCTGAGTCTTTCTTGT+TGG | + | chr3.3:20693519-20693538 | None:intergenic | 40.0% | |
| ! | GTTAAGGTGGTGGTTATTAG+AGG | + | chr3.3:20693365-20693384 | None:intergenic | 40.0% |
| !! | AAGAGGTTTTGATATGGTGG+TGG | + | chr3.3:20693321-20693340 | None:intergenic | 40.0% |
| !!! | TTTTGATATGGTGGTGGTTG+TGG | + | chr3.3:20693315-20693334 | None:intergenic | 40.0% |
| AAACGTTCCTTCCAACCTTC+TGG | + | chr3.3:20693557-20693576 | None:intergenic | 45.0% | |
| AGGAGATGATTCTGCTGCTA+TGG | + | chr3.3:20693435-20693454 | None:intergenic | 45.0% | |
| CTAACTGACGAAACCCAGAA+AGG | + | chr3.3:20693667-20693686 | None:intergenic | 45.0% | |
| GATGATTCTGCTGCTATGGA+AGG | + | chr3.3:20693431-20693450 | None:intergenic | 45.0% | |
| TACATCTACGACGTTCCAGA+AGG | - | chr3.3:20693539-20693558 | MS.gene46798:CDS | 45.0% | |
| TTAATGCTCCTACTCCTGAG+TGG | - | chr3.3:20693888-20693907 | MS.gene46798:CDS | 45.0% | |
| ! | AGGTGGTGATGTTGTGAGAA+TGG | + | chr3.3:20693411-20693430 | None:intergenic | 45.0% |
| ! | TGGTGATGTTGTGAGAATGG+TGG | + | chr3.3:20693408-20693427 | None:intergenic | 45.0% |
| GATTCTGCTGCTATGGAAGG+TGG | + | chr3.3:20693428-20693447 | None:intergenic | 50.0% | |
| GCAGCAAGTGCAGCAAACTA+CGG | - | chr3.3:20693476-20693495 | MS.gene46798:CDS | 50.0% | |
| TCTACGACGTTCCAGAAGGT+TGG | - | chr3.3:20693543-20693562 | MS.gene46798:CDS | 50.0% | |
| !! | TGATATGGTGGTGGTTGTGG+AGG | + | chr3.3:20693312-20693331 | None:intergenic | 50.0% |
| AGCTGCTGCTGCTGCTGTTA+AGG | + | chr3.3:20693381-20693400 | None:intergenic | 55.0% | |
| CGACGTTCCAGAAGGTTGGA+AGG | - | chr3.3:20693547-20693566 | MS.gene46798:CDS | 55.0% | |
| GAGGAGGAGAAAATGGGTGG+TGG | + | chr3.3:20693263-20693282 | None:intergenic | 55.0% | |
| GCAAGTGCAGCAAACTACGG+CGG | - | chr3.3:20693479-20693498 | MS.gene46798:CDS | 55.0% | |
| GGTGGTTGTGGAGGTTGTTG+TGG | + | chr3.3:20693303-20693322 | None:intergenic | 55.0% | |
| GGTTGTGGAGGTTGTTGTGG+TGG | + | chr3.3:20693300-20693319 | None:intergenic | 55.0% | |
| TGCTGCTGCTGCTGTTAAGG+TGG | + | chr3.3:20693378-20693397 | None:intergenic | 55.0% | |
| TGCTGCTGCTGTTAAGGTGG+TGG | + | chr3.3:20693375-20693394 | None:intergenic | 55.0% | |
| TGTGGAGGTTGTTGTGGTGG+TGG | + | chr3.3:20693297-20693316 | None:intergenic | 55.0% | |
| GCAGCAAACTACGGCGGCTA+CGG | - | chr3.3:20693485-20693504 | MS.gene46798:CDS | 60.0% | |
| GCGGAGGAGGAGAAAATGGG+TGG | + | chr3.3:20693266-20693285 | None:intergenic | 60.0% | |
| GCGGCGGAGGAGGAGAAAAT+GGG | + | chr3.3:20693269-20693288 | None:intergenic | 60.0% | |
| !! | GGAGGTTGTTGTGGTGGTGG+TGG | + | chr3.3:20693294-20693313 | None:intergenic | 60.0% |
| !! | GGTTGTTGTGGTGGTGGTGG+TGG | + | chr3.3:20693291-20693310 | None:intergenic | 60.0% |
| !! | TGTTGTGGTGGTGGTGGTGG+CGG | + | chr3.3:20693288-20693307 | None:intergenic | 60.0% |
| GCAAACTACGGCGGCTACGG+CGG | - | chr3.3:20693488-20693507 | MS.gene46798:CDS | 65.0% | |
| GGCGGCGGAGGAGGAGAAAA+TGG | + | chr3.3:20693270-20693289 | None:intergenic | 65.0% | |
| !! | TGTGGTGGTGGTGGTGGCGG+CGG | + | chr3.3:20693285-20693304 | None:intergenic | 70.0% |
| !!! | GGTGGTGGTGGCGGCGGAGG+AGG | + | chr3.3:20693279-20693298 | None:intergenic | 80.0% |
| !!! | GGTGGTGGTGGTGGCGGCGG+AGG | + | chr3.3:20693282-20693301 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 20693236 | 20693967 | 20693236 | ID=MS.gene46798 |
| chr3.3 | mRNA | 20693236 | 20693967 | 20693236 | ID=MS.gene46798.t1;Parent=MS.gene46798 |
| chr3.3 | exon | 20693236 | 20693967 | 20693236 | ID=MS.gene46798.t1.exon1;Parent=MS.gene46798.t1 |
| chr3.3 | CDS | 20693236 | 20693967 | 20693236 | ID=cds.MS.gene46798.t1;Parent=MS.gene46798.t1 |
| Gene Sequence |
| Protein sequence |
