AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene33786

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33786.t1 MTR_4g088920 94.633 913 49 0 1 913 1 913 0.0 1791
MS.gene33786.t1 MTR_5g068600 30.721 804 465 23 33 791 43 799 4.41e-85 290
MS.gene33786.t1 MTR_5g068600 31.454 674 384 18 151 789 67 697 1.17e-77 267
MS.gene33786.t1 MTR_1g045670 30.049 203 130 3 414 605 743 944 8.65e-18 89.4
MS.gene33786.t1 MTR_1g100683 33.858 127 82 2 428 553 799 924 6.45e-15 80.1
MS.gene33786.t1 MTR_1g100683 33.858 127 82 2 428 553 799 924 6.45e-15 80.1
MS.gene33786.t1 MTR_7g109470 25.763 295 169 10 403 665 1003 1279 8.56e-15 79.7
MS.gene33786.t1 MTR_6g086270 26.230 244 148 7 413 630 878 1115 1.83e-13 75.5
MS.gene33786.t1 MTR_4g111945 22.261 283 187 7 414 664 649 930 4.28e-13 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33786.t1 AT1G65070 53.639 893 351 12 28 913 40 876 0.0 902
MS.gene33786.t1 AT1G65070 53.600 875 343 12 28 895 40 858 0.0 878
MS.gene33786.t1 AT1G65070 55.311 772 293 8 28 794 40 764 0.0 816
MS.gene33786.t1 AT1G65070 56.962 632 223 7 28 655 40 626 0.0 692
MS.gene33786.t1 AT5G54090 30.235 807 471 24 20 784 34 790 7.73e-83 284
MS.gene33786.t1 AT3G24320 28.218 202 133 3 415 605 498 698 3.70e-17 87.0
MS.gene33786.t1 AT3G24320 28.218 202 133 3 415 605 743 943 5.29e-17 87.0
MS.gene33786.t1 AT4G25540 32.624 141 92 3 414 552 799 938 1.33e-14 79.0
MS.gene33786.t1 AT4G02070 24.167 360 204 12 203 550 897 1199 1.75e-12 72.4
MS.gene33786.t1 AT4G02070 24.167 360 204 12 203 550 900 1202 1.75e-12 72.4
MS.gene33786.t1 AT3G24495 26.577 222 141 6 412 612 826 1046 3.87e-12 70.9
MS.gene33786.t1 AT3G18524 29.252 147 99 4 414 557 648 792 7.03e-12 70.1
MS.gene33786.t1 AT4G17380 23.651 241 155 7 423 657 545 762 1.24e-11 69.3
MS.gene33786.t1 AT4G17380 28.462 130 92 1 423 552 545 673 1.25e-11 68.9

Find 218 sgRNAs with CRISPR-Local

Find 388 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAATTCATTGGACTTTC+TGG 0.056329 4.4:-23828433 None:intergenic
CTCTGGAGCAACATACTTTA+TGG 0.200265 4.4:+23824913 MS.gene33786:CDS
CTCCGCTCTTGCTGCTGTTC+TGG 0.212629 4.4:-23826136 None:intergenic
AAACCTTGCAACCAACTTAT+AGG 0.224407 4.4:+23826005 MS.gene33786:CDS
GCAAAATTGTAATTTCCTAA+TGG 0.255352 4.4:+23824622 MS.gene33786:CDS
CGAAAAGCAACTAAAAGATT+TGG 0.258652 4.4:+23826841 MS.gene33786:CDS
ACATCATATACTCCACAATT+TGG 0.262844 4.4:+23826974 MS.gene33786:CDS
CTTGTTCTCATTGATGAAAT+TGG 0.280062 4.4:+23825818 MS.gene33786:CDS
ATAGTACCTAAACTGAAAAT+TGG 0.281975 4.4:-23825139 None:intergenic
CCAGAAAGTCCAATGAATTA+TGG 0.282003 4.4:+23828433 MS.gene33786:CDS
GAAGAACACTCGCTGCTTCC+AGG 0.290821 4.4:+23823710 MS.gene33786:CDS
TTGCATAGATTGCAATCTTT+TGG 0.292449 4.4:+23824667 MS.gene33786:CDS
CTAGAATGTGCGTGGGCATC+AGG 0.296994 4.4:+23824840 MS.gene33786:CDS
ATTCTCTCCGTTGCTGTTTC+CGG 0.310263 4.4:+23823652 MS.gene33786:CDS
GACCTTATCCTTGCAGATAT+TGG 0.312231 4.4:+23825550 MS.gene33786:CDS
AGCAATGGTGATATTTATTA+TGG 0.313667 4.4:+23828211 MS.gene33786:CDS
CAAAATTGTAATTTCCTAAT+GGG 0.314744 4.4:+23824623 MS.gene33786:CDS
TTGCATCCTCTAACTCTTGT+TGG 0.316694 4.4:-23826787 None:intergenic
TTCAAATCTATTGCTTCTTT+CGG 0.318025 4.4:-23824938 None:intergenic
AGGTCAAACCAAGGAAGTTT+TGG 0.325111 4.4:-23825532 None:intergenic
AACCTTGCAACCAACTTATA+GGG 0.326348 4.4:+23826006 MS.gene33786:CDS
TCATTAGATCAGAACGAAAA+AGG 0.327607 4.4:+23824723 MS.gene33786:CDS
CTTGGCAGGCAGATGCATTC+CGG 0.328681 4.4:-23825503 None:intergenic
AGGTTTGATCGAGAAGCTTT+TGG 0.334460 4.4:-23823567 None:intergenic
AGGGATTGAGGGTTTGTTGA+TGG 0.339868 4.4:-23823362 None:intergenic
TTCTTAGATGTTTGCACCGC+TGG 0.347990 4.4:-23828235 None:intergenic
GATCGACGCTTAGTAATAAA+TGG 0.355822 4.4:-23824818 None:intergenic
ACGGGCGCTGTTGGCGGCGG+AGG 0.366945 4.4:-23823515 None:intergenic
GGGATTGAGGGTTTGTTGAT+GGG 0.370731 4.4:-23823361 None:intergenic
GAAAAGCAACTAAAAGATTT+GGG 0.371137 4.4:+23826842 MS.gene33786:CDS
AGCATTCACTTCCACTTCAA+TGG 0.372505 4.4:+23823489 MS.gene33786:CDS
ATCAGAGATAAAATATTTGT+TGG 0.373046 4.4:+23825048 MS.gene33786:CDS
AAGGAGAAGCGAGGGATTGA+GGG 0.374390 4.4:-23823373 None:intergenic
TCTGAGTTGGGTAATGGAAA+TGG 0.381561 4.4:+23825316 MS.gene33786:CDS
GAGTACGTCCGACGGGTAAA+CGG 0.383430 4.4:-23823534 None:intergenic
ATTACAAAGAGAACTGAATA+TGG 0.386756 4.4:-23828331 None:intergenic
AACTAGTTCTCCCACTCATC+AGG 0.387558 4.4:+23827153 MS.gene33786:CDS
CAAGGTCTTCTGCCTCCCTT+TGG 0.387704 4.4:-23826721 None:intergenic
AGGGTTCTCTGGGGATGTAT+TGG 0.387828 4.4:+23826025 MS.gene33786:CDS
GTTCTGAATGCCAGCAGCTC+TGG 0.388227 4.4:+23824896 MS.gene33786:CDS
AACCAACTTATAGGGTTCTC+TGG 0.388468 4.4:+23826014 MS.gene33786:CDS
GTAATACATGGGATGGGCAC+TGG 0.389103 4.4:+23828349 MS.gene33786:CDS
TTGTAATTTCCTAATGGGCT+TGG 0.389277 4.4:+23824628 MS.gene33786:CDS
GAAACAATCTTGGTACAGTA+TGG 0.389406 4.4:+23827064 MS.gene33786:CDS
TTAAGCATAGCGCAATCTAT+TGG 0.392431 4.4:+23826061 MS.gene33786:CDS
AATTCTTCTGAGTTGGGTAA+TGG 0.397648 4.4:+23825310 MS.gene33786:CDS
TCCTAATGGGCTTGGAGCGC+AGG 0.398236 4.4:+23824636 MS.gene33786:CDS
GAAGGAGAAGCGAGGGATTG+AGG 0.404110 4.4:-23823374 None:intergenic
AATGCTCTATCAGTCATTAC+AGG 0.405453 4.4:+23826162 MS.gene33786:CDS
GTTCATAATTTCTGCATGAA+TGG 0.405550 4.4:-23826227 None:intergenic
CAAGTCCGTGTGAAGGGATT+GGG 0.412733 4.4:+23827001 MS.gene33786:CDS
GTCATCTCAGGACCTAATAC+TGG 0.416951 4.4:+23825427 MS.gene33786:CDS
GTTGACTTCAAAATTAGATC+TGG 0.420665 4.4:+23825391 MS.gene33786:CDS
TGCTGATCTAAGTACTTTGA+AGG 0.425952 4.4:+23825937 MS.gene33786:CDS
TCAGTTCTCTTTGTAATACA+TGG 0.427691 4.4:+23828337 MS.gene33786:CDS
ATTTGAACAACATGGAAGTT+AGG 0.428354 4.4:+23824954 MS.gene33786:CDS
GGGTAAACGGGCGCTGTTGG+CGG 0.429602 4.4:-23823521 None:intergenic
ACTAGAGTGGTGGTCATCTC+AGG 0.432380 4.4:+23825415 MS.gene33786:CDS
TAATACATGGGATGGGCACT+GGG 0.432402 4.4:+23828350 MS.gene33786:CDS
GTCTGGAAATTCTTCTGAGT+TGG 0.433211 4.4:+23825303 MS.gene33786:CDS
GTAGCAGAAGCAAGGTTTGA+AGG 0.434423 4.4:-23823392 None:intergenic
CTTCGAACGGTGCAAAGCTC+GGG 0.437748 4.4:-23823691 None:intergenic
GCATTCAGAACTATACCTTC+TGG 0.438902 4.4:-23824884 None:intergenic
TCCTGCGCTCCAAGCCCATT+AGG 0.439036 4.4:-23824637 None:intergenic
TCTGGAAATTCTTCTGAGTT+GGG 0.439306 4.4:+23825304 MS.gene33786:CDS
GCCTATGCTCAATGGATGAA+TGG 0.441853 4.4:+23825109 MS.gene33786:CDS
GCAAGTCCGTGTGAAGGGAT+TGG 0.444020 4.4:+23827000 MS.gene33786:CDS
TGAGTGGGAGAACTAGTTGC+AGG 0.444981 4.4:-23827148 None:intergenic
CTCCAATATCTGCAAGGATA+AGG 0.447195 4.4:-23825552 None:intergenic
ACGGGTCCAACAAGAGTTAG+AGG 0.448882 4.4:+23826781 MS.gene33786:CDS
TGCTGAGAGTTGCTTGCATA+TGG 0.449310 4.4:-23823470 None:intergenic
CCTATGCTCAATGGATGAAT+GGG 0.451608 4.4:+23825110 MS.gene33786:CDS
ACAGTACATCCATAATTCAT+TGG 0.451719 4.4:-23828442 None:intergenic
TATGGCAAAGGAAGCTCAAC+GGG 0.452879 4.4:+23826763 MS.gene33786:CDS
AGAAAAGTCCAAAACTTCCT+TGG 0.454680 4.4:+23825524 MS.gene33786:CDS
GCATTCACTTCCACTTCAAT+GGG 0.457389 4.4:+23823490 MS.gene33786:CDS
TAAACGGGCGCTGTTGGCGG+CGG 0.458599 4.4:-23823518 None:intergenic
AATCCTGGACTCTTTATTGA+AGG 0.459366 4.4:+23824754 MS.gene33786:CDS
TAGACGTGAAACGATGCTTA+TGG 0.459950 4.4:+23826745 MS.gene33786:CDS
CTTTAATTATTGAATTGAGT+TGG 0.464631 4.4:-23826871 None:intergenic
GTTAAAGGCTCAAGCTGAAA+AGG 0.465641 4.4:+23826198 MS.gene33786:CDS
TTCAAACTCTGAAGCGGCCG+AGG 0.466077 4.4:+23824979 MS.gene33786:CDS
ACCAACTTATAGGGTTCTCT+GGG 0.467907 4.4:+23826015 MS.gene33786:CDS
TTCAATGAAAACGTTGGGCC+TGG 0.468162 4.4:+23825462 MS.gene33786:CDS
GGATTGAGGGTTTGTTGATG+GGG 0.474954 4.4:-23823360 None:intergenic
GCAGGATTCTTTGCACTTGG+TGG 0.477236 4.4:-23827130 None:intergenic
AGTACGTCCGACGGGTAAAC+GGG 0.478043 4.4:-23823533 None:intergenic
CCGCAGATATTGTAAGATAC+TGG 0.478412 4.4:-23825879 None:intergenic
GTATGTTGCTCCAGAGCTGC+TGG 0.478675 4.4:-23824906 None:intergenic
GCCACAGTGGTAGAATTGCC+TGG 0.478854 4.4:+23827034 MS.gene33786:CDS
CAATGACATTGCGGTCGTGC+AGG 0.479424 4.4:+23825189 MS.gene33786:CDS
CTCATTGATGAAATTGGTAG+TGG 0.480474 4.4:+23825824 MS.gene33786:CDS
AGAGGATGCAAAATCTCAAA+TGG 0.483805 4.4:+23826799 MS.gene33786:CDS
ATCTAAGTACTTTGAAGGAA+AGG 0.486923 4.4:+23825942 MS.gene33786:CDS
GACGGGTAAACGGGCGCTGT+TGG 0.491238 4.4:-23823524 None:intergenic
TCTAAGTACTTTGAAGGAAA+GGG 0.492540 4.4:+23825943 MS.gene33786:CDS
GATAATGTCACACTAAGGTC+TGG 0.494415 4.4:+23825286 MS.gene33786:CDS
ACTGCTTCAATGAAAACGTT+GGG 0.494465 4.4:+23825457 MS.gene33786:CDS
CAAGAGCTGCCTATGCTCAA+TGG 0.496220 4.4:+23825101 MS.gene33786:CDS
TCTTCGAACGGTGCAAAGCT+CGG 0.496479 4.4:-23823692 None:intergenic
GTTGCAGGATTCTTTGCACT+TGG 0.499764 4.4:-23827133 None:intergenic
GATGGGGATGAAGAGGTTGC+AGG 0.501851 4.4:-23823344 None:intergenic
CTATTGTAGAAACCACTGAA+TGG 0.501864 4.4:+23828157 MS.gene33786:intron
GTTTGATAGTTTGAAACACT+TGG 0.502558 4.4:+23823738 MS.gene33786:CDS
CGATTTAACAGTAAATATTG+AGG 0.507073 4.4:+23825216 MS.gene33786:CDS
ACCTGCTTTCCCTGATGAGT+GGG 0.510949 4.4:-23827163 None:intergenic
TCTCTTTGTAATACATGGGA+TGG 0.512107 4.4:+23828342 MS.gene33786:CDS
TATGCGGCATCCATTACTCC+TGG 0.512692 4.4:+23825240 MS.gene33786:CDS
CGCTGATTGTCATCTCAAGA+TGG 0.514272 4.4:-23828300 None:intergenic
ACCACTGAATGGAAAATCCC+GGG 0.517125 4.4:+23828168 MS.gene33786:CDS
ATGCGATCAGCGCCACTGAT+GGG 0.523837 4.4:-23826950 None:intergenic
AACCCTATAAGTTGGTTGCA+AGG 0.524314 4.4:-23826008 None:intergenic
GCATCGTTTCACGTCTATCA+AGG 0.526470 4.4:-23826739 None:intergenic
CCACAGTGGTAGAATTGCCT+GGG 0.526487 4.4:+23827035 MS.gene33786:CDS
CAAACTATCAAACAATTCCC+TGG 0.528874 4.4:-23823728 None:intergenic
TCCCACTCATCAGGGAAAGC+AGG 0.529174 4.4:+23827162 MS.gene33786:CDS
TTCAGTTTAGGTACTATTGG+AGG 0.531767 4.4:+23825145 MS.gene33786:CDS
GTTCTGATCTAATGATCTCC+AGG 0.531958 4.4:-23824715 None:intergenic
ACTCAAAATTGCTCTTTCCT+CGG 0.533024 4.4:-23824996 None:intergenic
AACCACTGAATGGAAAATCC+CGG 0.535658 4.4:+23828167 MS.gene33786:CDS
CTTCCTTCAATAAAGAGTCC+AGG 0.535939 4.4:-23824757 None:intergenic
CAGTTCTCTTTGTAATACAT+GGG 0.538091 4.4:+23828338 MS.gene33786:CDS
TGGGCATCAGGGCTTCGTAT+AGG 0.539792 4.4:+23824852 MS.gene33786:CDS
GTTTGTTGATGGGGATGAAG+AGG 0.545453 4.4:-23823351 None:intergenic
TAATTGACCATGCACAAAAG+TGG 0.545555 4.4:+23826098 MS.gene33786:CDS
GGATTGGACTGAGTTGGACT+CGG 0.547239 4.4:-23823419 None:intergenic
GGAGAGCAAGTCCGTGTGAA+GGG 0.549755 4.4:+23826995 MS.gene33786:CDS
CCCCAGAGAACCCTATAAGT+TGG 0.550494 4.4:-23826016 None:intergenic
AAGGTTTGAAGGAGAAGCGA+GGG 0.550811 4.4:-23823381 None:intergenic
TTGTTGTTGAGGAATGAGTC+TGG 0.550825 4.4:-23823596 None:intergenic
CGGACTTGCTCTCCAAATTG+TGG 0.554429 4.4:-23826986 None:intergenic
TGGGGATGATGAAACAATCT+TGG 0.554483 4.4:+23827054 MS.gene33786:CDS
GTTCATCTCTAAGTTACCCC+GGG 0.556248 4.4:-23828185 None:intergenic
TCTGCGGGAACATGTTAACT+TGG 0.556527 4.4:+23825895 MS.gene33786:CDS
GTCTGTTGGAGTACGTCCGA+CGG 0.557543 4.4:-23823542 None:intergenic
AGAGACGACTCCAGGAGTAA+TGG 0.558135 4.4:-23825250 None:intergenic
AAGAACACTCGCTGCTTCCA+GGG 0.558472 4.4:+23823711 MS.gene33786:CDS
AACCAGAACAGCAGCAAGAG+CGG 0.560885 4.4:+23826134 MS.gene33786:CDS
AGGTTGCAGGTGAGTTGCAT+CGG 0.562147 4.4:-23823331 None:intergenic
GATTTAACAGTAAATATTGA+GGG 0.563255 4.4:+23825217 MS.gene33786:CDS
TATAGGTATTTGCTTCCAGA+AGG 0.564358 4.4:+23824869 MS.gene33786:CDS
TGCAGATATTGGAGATCACC+AGG 0.564613 4.4:+23825561 MS.gene33786:CDS
TCTGTTGGAGTACGTCCGAC+GGG 0.568179 4.4:-23823541 None:intergenic
TGATAGAGCAAGTGAAGACC+TGG 0.568238 4.4:+23824697 MS.gene33786:CDS
CTCTTTGTAATACATGGGAT+GGG 0.569356 4.4:+23828343 MS.gene33786:CDS
AGGTTGCAATTCTGTTGAAG+AGG 0.570911 4.4:+23825165 MS.gene33786:CDS
GCATCACTTATGTCAAAAGC+CGG 0.571118 4.4:+23825484 MS.gene33786:CDS
AACTGATCCTTCAGAAGGTG+TGG 0.571658 4.4:+23825847 MS.gene33786:CDS
CAGTATCTTACAATATCTGC+GGG 0.572845 4.4:+23825880 MS.gene33786:CDS
ATAGCCTCAAAACTCTCGAA+TGG 0.578502 4.4:+23823443 MS.gene33786:CDS
AGGAATGAGTCTGGCAGCGG+AGG 0.579503 4.4:-23823587 None:intergenic
TTCCTCCCAATCCCTTCACA+CGG 0.581458 4.4:-23827006 None:intergenic
GCCACTGATGGGAGAACCAA+CGG 0.582829 4.4:-23826939 None:intergenic
AAGATTGTTTCATCATCCCC+AGG 0.584283 4.4:-23827052 None:intergenic
AACTGCTTCAATGAAAACGT+TGG 0.585712 4.4:+23825456 MS.gene33786:CDS
TGGAGAGCAAGTCCGTGTGA+AGG 0.586036 4.4:+23826994 MS.gene33786:CDS
TGAAACGATGCTTATGGCAA+AGG 0.587621 4.4:+23826751 MS.gene33786:CDS
TTAGAGATGAACAGCAGCAA+TGG 0.589819 4.4:+23828196 MS.gene33786:CDS
TGTTCATCTCTAAGTTACCC+CGG 0.590270 4.4:-23828186 None:intergenic
GCTATCGGATTGGACTGAGT+TGG 0.590319 4.4:-23823425 None:intergenic
ACTAGTTCTCCCACTCATCA+GGG 0.590763 4.4:+23827154 MS.gene33786:CDS
TTGAGGAATGAGTCTGGCAG+CGG 0.591996 4.4:-23823590 None:intergenic
GCCGTTGGTTCTCCCATCAG+TGG 0.592897 4.4:+23826938 MS.gene33786:CDS
TTTCAGATAATGTCACACTA+AGG 0.593354 4.4:+23825281 MS.gene33786:CDS
TACCTGCTTTCCCTGATGAG+TGG 0.594282 4.4:-23827164 None:intergenic
TAGAATGTGCGTGGGCATCA+GGG 0.594705 4.4:+23824841 MS.gene33786:CDS
GGCGGAGGAGCCCATTGAAG+TGG 0.595273 4.4:-23823500 None:intergenic
AATGCGATCAGCGCCACTGA+TGG 0.596091 4.4:-23826951 None:intergenic
GCGTCGATCTAGAATGTGCG+TGG 0.598379 4.4:+23824832 MS.gene33786:CDS
AATTGACCATGCACAAAAGT+GGG 0.600519 4.4:+23826099 MS.gene33786:CDS
TAGGCTTTCAAACTCTGAAG+CGG 0.601365 4.4:+23824973 MS.gene33786:CDS
ATCTCAGGACCTAATACTGG+AGG 0.603222 4.4:+23825430 MS.gene33786:CDS
GAAAGAGCCACACCTTCTGA+AGG 0.603440 4.4:-23825854 None:intergenic
CTGTATCTAATCATTCACAC+AGG 0.610846 4.4:+23823764 MS.gene33786:CDS
AGCAATAGATTTGAACAACA+TGG 0.612310 4.4:+23824946 MS.gene33786:CDS
GTCCGTGTGAAGGGATTGGG+AGG 0.612668 4.4:+23827004 MS.gene33786:CDS
CCAGTATCTTACAATATCTG+CGG 0.612724 4.4:+23825879 MS.gene33786:CDS
TCGGTTGAGTAGCAGAAGCA+AGG 0.613416 4.4:-23823400 None:intergenic
GGATCTACGAGGTATGCGAC+TGG 0.616506 4.4:+23828264 MS.gene33786:CDS
GCTTCTAAAAGCGCGTCACA+AGG 0.619119 4.4:+23825346 MS.gene33786:CDS
AATTAGATCTGGAACTAGAG+TGG 0.621351 4.4:+23825402 MS.gene33786:CDS
AACAGCGCCCGTTTACCCGT+CGG 0.621694 4.4:+23823526 MS.gene33786:CDS
CCCATTCATCCATTGAGCAT+AGG 0.623957 4.4:-23825110 None:intergenic
AAAGCTCATACTCCTGCCGT+TGG 0.625973 4.4:+23826923 MS.gene33786:CDS
CAGTAAATATTGAGGGTATG+CGG 0.626418 4.4:+23825224 MS.gene33786:CDS
TTATGGCAAAGGAAGCTCAA+CGG 0.627066 4.4:+23826762 MS.gene33786:CDS
GGGAATAGTCAACAAACTAC+CGG 0.627765 4.4:-23823671 None:intergenic
AGTGGAACTGATCCTTCAGA+AGG 0.631076 4.4:+23825842 MS.gene33786:CDS
CAAGGTTTGAAGGAGAAGCG+AGG 0.631968 4.4:-23823382 None:intergenic
GAAAAGTCGAGTTGTTGTTG+AGG 0.632731 4.4:-23823607 None:intergenic
AGCAGCGAGTGTTCTTCGAA+CGG 0.642225 4.4:-23823704 None:intergenic
CTGATGGGAGAACCAACGGC+AGG 0.643450 4.4:-23826935 None:intergenic
GGTGATCTCCAATATCTGCA+AGG 0.644964 4.4:-23825558 None:intergenic
TTCCAGTGAAAATTCCATTG+CGG 0.649211 4.4:-23825984 None:intergenic
CGTCGATCTAGAATGTGCGT+GGG 0.653354 4.4:+23824833 MS.gene33786:CDS
TGACCATGCACAAAAGTGGG+TGG 0.654188 4.4:+23826102 MS.gene33786:CDS
GGGTAATGGAAATGGAACAA+TGG 0.655085 4.4:+23825324 MS.gene33786:CDS
CAAACTACCGGAAACAGCAA+CGG 0.655170 4.4:-23823659 None:intergenic
GAACAGCAGCAAGAGCGGAG+AGG 0.655853 4.4:+23826139 MS.gene33786:CDS
GCAAACATCTAAGAATACTG+TGG 0.660918 4.4:+23828243 MS.gene33786:CDS
GCTCTATCAGTCATTACAGG+AGG 0.665919 4.4:+23826165 MS.gene33786:CDS
TCTCAGGACCTAATACTGGA+GGG 0.667789 4.4:+23825431 MS.gene33786:CDS
CTGTTGCACGTGTTAAGTGA+AGG 0.669861 4.4:+23828461 MS.gene33786:CDS
TAGATCTGGAACTAGAGTGG+TGG 0.673809 4.4:+23825405 MS.gene33786:CDS
ACTTAGATCAGCATAATGAG+TGG 0.681388 4.4:-23825927 None:intergenic
CTATGCTCAATGGATGAATG+GGG 0.683732 4.4:+23825111 MS.gene33786:CDS
CACAGTGGTAGAATTGCCTG+GGG 0.691114 4.4:+23827036 MS.gene33786:CDS
TGATATTTATTATGGTCCAG+CGG 0.693969 4.4:+23828219 MS.gene33786:CDS
AATTATGAACGTGTACTCTG+AGG 0.698166 4.4:+23826240 MS.gene33786:CDS
AATACATGGGATGGGCACTG+GGG 0.701367 4.4:+23828351 MS.gene33786:CDS
TGAAGAGGACAATGACATTG+CGG 0.707528 4.4:+23825180 MS.gene33786:CDS
CCCAGGCAATTCTACCACTG+TGG 0.714085 4.4:-23827035 None:intergenic
GGGAGGAAAATTAGCCACAG+TGG 0.714859 4.4:+23827021 MS.gene33786:CDS
GCAAGGATAAGGTCAAACCA+AGG 0.720894 4.4:-23825541 None:intergenic
CCACTGAATGGAAAATCCCG+GGG 0.744139 4.4:+23828169 MS.gene33786:CDS
AAGAATACTGTGGATCTACG+AGG 0.748281 4.4:+23828253 MS.gene33786:CDS
GGTTCAAAATGAGTGACACG+AGG 0.753470 4.4:-23828412 None:intergenic
CCAACTTATAGGGTTCTCTG+GGG 0.797932 4.4:+23826016 MS.gene33786:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAGAATTGATATATTT+TGG + chr4.4:23827600-23827619 MS.gene33786:intron 10.0%
!! AAATACCTTTCAATAAAATT+TGG - chr4.4:23827536-23827555 None:intergenic 15.0%
!! AATTTCAGATAAACTTTAAA+AGG - chr4.4:23826358-23826377 None:intergenic 15.0%
!! ATAATGATTATCATACTATA+TGG - chr4.4:23826331-23826350 None:intergenic 15.0%
!! ATATAAGTAAAAGAAGTTAT+TGG + chr4.4:23827500-23827519 MS.gene33786:intron 15.0%
!! ATATATATATATATGTCATG+TGG + chr4.4:23825669-23825688 MS.gene33786:intron 15.0%
!!! AAGGTATTTTATATTTAATC+TGG + chr4.4:23827547-23827566 MS.gene33786:intron 15.0%
!!! AATTTTGTCTAAATCAAATT+AGG - chr4.4:23828020-23828039 None:intergenic 15.0%
!!! ATTTCAGATAAACTTTAAAA+GGG - chr4.4:23826357-23826376 None:intergenic 15.0%
!!! TTACTATTTTAGTAAGAATT+GGG + chr4.4:23827717-23827736 MS.gene33786:intron 15.0%
!! AAATAAAAGGAAACAGTTTA+TGG + chr4.4:23823984-23824003 MS.gene33786:intron 20.0%
!! AATAAAAGGAAACAGTTTAT+GGG + chr4.4:23823985-23824004 MS.gene33786:intron 20.0%
!! ATATTTAAATTAACAGCTCT+TGG - chr4.4:23826508-23826527 None:intergenic 20.0%
!! ATCAGAGATAAAATATTTGT+TGG + chr4.4:23825048-23825067 MS.gene33786:CDS 20.0%
!! CAAAATTGTAATTTCCTAAT+GGG + chr4.4:23824623-23824642 MS.gene33786:CDS 20.0%
!! CTTTAATTATTGAATTGAGT+TGG - chr4.4:23826874-23826893 None:intergenic 20.0%
!! GATTTAACAGTAAATATTGA+GGG + chr4.4:23825217-23825236 MS.gene33786:CDS 20.0%
!! TTGCAAAATAACTTTCTTAA+TGG - chr4.4:23827280-23827299 None:intergenic 20.0%
!!! ATTATCTAAAATATTCTTCG+TGG + chr4.4:23827466-23827485 MS.gene33786:intron 20.0%
!!! ATTTTTGTGAACTTTTACTT+TGG - chr4.4:23824548-23824567 None:intergenic 20.0%
!!! CATTTTTTCTTTTGAAGTAA+TGG + chr4.4:23827570-23827589 MS.gene33786:intron 20.0%
!!! CTTATTATATTTGAAACTAG+AGG - chr4.4:23827367-23827386 None:intergenic 20.0%
!!! GAAATCCAAATTTTATTGAA+AGG + chr4.4:23827528-23827547 MS.gene33786:intron 20.0%
!!! GTTACTATTTTAGTAAGAAT+TGG + chr4.4:23827716-23827735 MS.gene33786:intron 20.0%
!!! TACTATTTTAGTAAGAATTG+GGG + chr4.4:23827718-23827737 MS.gene33786:intron 20.0%
!!! TTAAGAAGCCAATTTTAAAA+AGG - chr4.4:23827997-23828016 None:intergenic 20.0%
!!! TTTTACTTTGGATTTGTAAA+AGG - chr4.4:23824536-23824555 None:intergenic 20.0%
! AAAAAAGTTCAGATATTACC+TGG - chr4.4:23825582-23825601 None:intergenic 25.0%
! AAATAGTAACAAATACTCTC+CGG - chr4.4:23827706-23827725 None:intergenic 25.0%
! AGCAATGGTGATATTTATTA+TGG + chr4.4:23828211-23828230 MS.gene33786:CDS 25.0%
! ATAGTACCTAAACTGAAAAT+TGG - chr4.4:23825142-23825161 None:intergenic 25.0%
! ATTAATAGATATCCAATCCT+CGG + chr4.4:23826476-23826495 MS.gene33786:intron 25.0%
! ATTACAAAGAGAACTGAATA+TGG - chr4.4:23828334-23828353 None:intergenic 25.0%
! ATTCAATGTGCCTATATTAT+AGG - chr4.4:23827947-23827966 None:intergenic 25.0%
! CAATTTCCAAATATGATGTT+AGG - chr4.4:23827910-23827929 None:intergenic 25.0%
! CGATTTAACAGTAAATATTG+AGG + chr4.4:23825216-23825235 MS.gene33786:CDS 25.0%
! CTAACATCATATTTGGAAAT+TGG + chr4.4:23827908-23827927 MS.gene33786:intron 25.0%
! GAAAAGCAACTAAAAGATTT+GGG + chr4.4:23826842-23826861 MS.gene33786:CDS 25.0%
! GCAAAATTGTAATTTCCTAA+TGG + chr4.4:23824622-23824641 MS.gene33786:CDS 25.0%
! GGTATTTATTACAGAAAAAC+AGG - chr4.4:23827882-23827901 None:intergenic 25.0%
! GTTGTTCTATCATGTAATTT+GGG + chr4.4:23827762-23827781 MS.gene33786:intron 25.0%
! TTAATATAGTTAACCTGTCA+AGG + chr4.4:23827230-23827249 MS.gene33786:intron 25.0%
! TTATTATAGTTTCTTCTCCT+TGG + chr4.4:23826304-23826323 MS.gene33786:intron 25.0%
! TTCAAATCTATTGCTTCTTT+CGG - chr4.4:23824941-23824960 None:intergenic 25.0%
! TTCAGATCATCCTATAATAT+AGG + chr4.4:23827934-23827953 MS.gene33786:intron 25.0%
! TTTCAGACATTTCTAATTGA+TGG + chr4.4:23824099-23824118 MS.gene33786:intron 25.0%
!! AAAATCTCTCAACTTTTAGT+GGG + chr4.4:23825747-23825766 MS.gene33786:CDS 25.0%
!! AATTTTGCAGTATTTCAAGA+AGG - chr4.4:23824610-23824629 None:intergenic 25.0%
!! ATTTTCAGTTTAGGTACTAT+TGG + chr4.4:23825142-23825161 MS.gene33786:CDS 25.0%
!! ATTTTGCAGTATTTCAAGAA+GGG - chr4.4:23824609-23824628 None:intergenic 25.0%
!! GTATTTTTCTTGACAAAGTT+CGG + chr4.4:23824415-23824434 MS.gene33786:intron 25.0%
!! GTTTTTCTGTAATAAATACC+AGG + chr4.4:23827882-23827901 MS.gene33786:intron 25.0%
!! TAACGGCATTATGAAAATTT+TGG - chr4.4:23826547-23826566 None:intergenic 25.0%
!! TCAATAGTTTAAGACATGTT+TGG + chr4.4:23823814-23823833 MS.gene33786:intron 25.0%
!! TGATGCAATTGTTTTCAATT+AGG + chr4.4:23824576-23824595 MS.gene33786:intron 25.0%
!! TTTTTGGATATATCCAATAG+CGG + chr4.4:23827640-23827659 MS.gene33786:intron 25.0%
!!! AAGTATCGTCTCAAATTTTT+CGG + chr4.4:23824777-23824796 MS.gene33786:CDS 25.0%
!!! ATCTGTCTCCTTTTTAAAAT+TGG + chr4.4:23827986-23828005 MS.gene33786:intron 25.0%
AAAAAGGAACATAGAAATCC+TGG + chr4.4:23824739-23824758 MS.gene33786:CDS 30.0%
AATTACATGATAGAACAACG+AGG - chr4.4:23827761-23827780 None:intergenic 30.0%
ACAGTACATCCATAATTCAT+TGG - chr4.4:23828445-23828464 None:intergenic 30.0%
ACATCATATACTCCACAATT+TGG + chr4.4:23826974-23826993 MS.gene33786:CDS 30.0%
ACTATTACTTAGCGTATGTT+TGG - chr4.4:23824155-23824174 None:intergenic 30.0%
ACTTATTTGAGCTAATCTAC+CGG - chr4.4:23824128-23824147 None:intergenic 30.0%
AGAAATTCTCTAAGCAATCA+AGG - chr4.4:23824219-23824238 None:intergenic 30.0%
AGCAATAGATTTGAACAACA+TGG + chr4.4:23824946-23824965 MS.gene33786:CDS 30.0%
AGTAATCTTATCTACTGAGT+TGG + chr4.4:23827302-23827321 MS.gene33786:intron 30.0%
ATTTGAACAACATGGAAGTT+AGG + chr4.4:23824954-23824973 MS.gene33786:CDS 30.0%
CAGTTCTCTTTGTAATACAT+GGG + chr4.4:23828338-23828357 MS.gene33786:CDS 30.0%
CATTACAGGAGGAAAAAAAT+CGG + chr4.4:23826176-23826195 MS.gene33786:CDS 30.0%
CGAAAAGCAACTAAAAGATT+TGG + chr4.4:23826841-23826860 MS.gene33786:CDS 30.0%
CGTTGTTCTATCATGTAATT+TGG + chr4.4:23827761-23827780 MS.gene33786:intron 30.0%
CTTGTTCTCATTGATGAAAT+TGG + chr4.4:23825818-23825837 MS.gene33786:CDS 30.0%
GATCTTTGCAAAAGAAGAAA+AGG - chr4.4:23826702-23826721 None:intergenic 30.0%
GGATTGGATATCTATTAATG+AGG - chr4.4:23826475-23826494 None:intergenic 30.0%
GTAATCTTATCTACTGAGTT+GGG + chr4.4:23827303-23827322 MS.gene33786:intron 30.0%
GTTCATAATTTCTGCATGAA+TGG - chr4.4:23826230-23826249 None:intergenic 30.0%
TCAGTTCTCTTTGTAATACA+TGG + chr4.4:23828337-23828356 MS.gene33786:CDS 30.0%
TCATTAGATCAGAACGAAAA+AGG + chr4.4:23824723-23824742 MS.gene33786:CDS 30.0%
TGATATTTATTATGGTCCAG+CGG + chr4.4:23828219-23828238 MS.gene33786:CDS 30.0%
TTAATAGATATCCAATCCTC+GGG + chr4.4:23826477-23826496 MS.gene33786:intron 30.0%
TTATCATACTATATGGACCA+AGG - chr4.4:23826324-23826343 None:intergenic 30.0%
TTGCTTAGAGAATTTCTGTA+TGG + chr4.4:23824222-23824241 MS.gene33786:intron 30.0%
TTTCAGATAATGTCACACTA+AGG + chr4.4:23825281-23825300 MS.gene33786:CDS 30.0%
! AAGTTGAGAGATTTTGTTCA+AGG - chr4.4:23825742-23825761 None:intergenic 30.0%
! AGTATCGTCTCAAATTTTTC+GGG + chr4.4:23824778-23824797 MS.gene33786:CDS 30.0%
! AGTTGAGAGATTTTGTTCAA+GGG - chr4.4:23825741-23825760 None:intergenic 30.0%
! ATCAACGTTTTTGATGTCTA+TGG + chr4.4:23824287-23824306 MS.gene33786:intron 30.0%
! ATCTAAGTACTTTGAAGGAA+AGG + chr4.4:23825942-23825961 MS.gene33786:CDS 30.0%
! ATGAAAATTTTGGATGGAAG+AGG - chr4.4:23826537-23826556 None:intergenic 30.0%
! CAAAATCTCTCAACTTTTAG+TGG + chr4.4:23825746-23825765 MS.gene33786:CDS 30.0%
! GGCATTATGAAAATTTTGGA+TGG - chr4.4:23826543-23826562 None:intergenic 30.0%
! GTATGTCCAATTTTCAGTTT+AGG + chr4.4:23825133-23825152 MS.gene33786:CDS 30.0%
! GTTGACTTCAAAATTAGATC+TGG + chr4.4:23825391-23825410 MS.gene33786:CDS 30.0%
! GTTTGATAGTTTGAAACACT+TGG + chr4.4:23823738-23823757 MS.gene33786:CDS 30.0%
! TCAACGTTTTTGATGTCTAT+GGG + chr4.4:23824288-23824307 MS.gene33786:intron 30.0%
! TCTAAGTACTTTGAAGGAAA+GGG + chr4.4:23825943-23825962 MS.gene33786:CDS 30.0%
! TTCTTTTGCAAAGATCCAAA+GGG + chr4.4:23826706-23826725 MS.gene33786:intron 30.0%
! TTGCATAGATTGCAATCTTT+TGG + chr4.4:23824667-23824686 MS.gene33786:CDS 30.0%
! TTTCATAATGCCGTTATTTC+TGG + chr4.4:23826551-23826570 MS.gene33786:intron 30.0%
! TTTTGCAGTATTTCAAGAAG+GGG - chr4.4:23824608-23824627 None:intergenic 30.0%
!! TTCATAATGCCGTTATTTCT+GGG + chr4.4:23826552-23826571 MS.gene33786:intron 30.0%
!!! ACACTCTTTTAAGACCTTAT+TGG - chr4.4:23824469-23824488 None:intergenic 30.0%
!!! CACTCTTTTAAGACCTTATT+GGG - chr4.4:23824468-23824487 None:intergenic 30.0%
!!! GATCTAATTTTGAAGTCAAC+TGG - chr4.4:23825391-23825410 None:intergenic 30.0%
AAACCTTGCAACCAACTTAT+AGG + chr4.4:23826005-23826024 MS.gene33786:CDS 35.0%
AACCTTGCAACCAACTTATA+GGG + chr4.4:23826006-23826025 MS.gene33786:CDS 35.0%
AACTGCTTCAATGAAAACGT+TGG + chr4.4:23825456-23825475 MS.gene33786:CDS 35.0%
AATCCTGGACTCTTTATTGA+AGG + chr4.4:23824754-23824773 MS.gene33786:CDS 35.0%
AATGCTCTATCAGTCATTAC+AGG + chr4.4:23826162-23826181 MS.gene33786:CDS 35.0%
AATTATGAACGTGTACTCTG+AGG + chr4.4:23826240-23826259 MS.gene33786:CDS 35.0%
AATTGACCATGCACAAAAGT+GGG + chr4.4:23826099-23826118 MS.gene33786:CDS 35.0%
ACTCAAAATTGCTCTTTCCT+CGG - chr4.4:23824999-23825018 None:intergenic 35.0%
ACTGCTTCAATGAAAACGTT+GGG + chr4.4:23825457-23825476 MS.gene33786:CDS 35.0%
ACTTAGATCAGCATAATGAG+TGG - chr4.4:23825930-23825949 None:intergenic 35.0%
AGAAAAGTCCAAAACTTCCT+TGG + chr4.4:23825524-23825543 MS.gene33786:CDS 35.0%
AGAAGAAAAGGAAAAGAGTG+AGG - chr4.4:23826690-23826709 None:intergenic 35.0%
AGAGGATGCAAAATCTCAAA+TGG + chr4.4:23826799-23826818 MS.gene33786:CDS 35.0%
CAAACTATCAAACAATTCCC+TGG - chr4.4:23823731-23823750 None:intergenic 35.0%
CAAATATGATGTTAGGAACC+TGG - chr4.4:23827903-23827922 None:intergenic 35.0%
CAGGTTCCTAACATCATATT+TGG + chr4.4:23827901-23827920 MS.gene33786:intron 35.0%
CAGTATCTTACAATATCTGC+GGG + chr4.4:23825880-23825899 MS.gene33786:CDS 35.0%
CATAATGTCATGTCCCAATA+AGG + chr4.4:23824452-23824471 MS.gene33786:intron 35.0%
CCAGAAAGTCCAATGAATTA+TGG + chr4.4:23828433-23828452 MS.gene33786:CDS 35.0%
CCAGTATCTTACAATATCTG+CGG + chr4.4:23825879-23825898 MS.gene33786:CDS 35.0%
CCATAATTCATTGGACTTTC+TGG - chr4.4:23828436-23828455 None:intergenic 35.0%
CTAATTGCTTTGCACTTTCT+TGG + chr4.4:23826649-23826668 MS.gene33786:intron 35.0%
CTATTGTAGAAACCACTGAA+TGG + chr4.4:23828157-23828176 MS.gene33786:intron 35.0%
CTCATTGATGAAATTGGTAG+TGG + chr4.4:23825824-23825843 MS.gene33786:CDS 35.0%
CTCTTTGTAATACATGGGAT+GGG + chr4.4:23828343-23828362 MS.gene33786:CDS 35.0%
CTGTATCTAATCATTCACAC+AGG + chr4.4:23823764-23823783 MS.gene33786:CDS 35.0%
GAAACAATCTTGGTACAGTA+TGG + chr4.4:23827064-23827083 MS.gene33786:CDS 35.0%
GAAGAAAAGGAAAAGAGTGA+GGG - chr4.4:23826689-23826708 None:intergenic 35.0%
GAGTATGTAAATAGCTAGAG+GGG + chr4.4:23827666-23827685 MS.gene33786:intron 35.0%
GATCGACGCTTAGTAATAAA+TGG - chr4.4:23824821-23824840 None:intergenic 35.0%
GCAAACATCTAAGAATACTG+TGG + chr4.4:23828243-23828262 MS.gene33786:CDS 35.0%
GGAGGAAAAAAATCGGTTAA+AGG + chr4.4:23826183-23826202 MS.gene33786:CDS 35.0%
GGAGTATGTAAATAGCTAGA+GGG + chr4.4:23827665-23827684 MS.gene33786:intron 35.0%
GGATATCTATTAATGAGGCA+CGG - chr4.4:23826470-23826489 None:intergenic 35.0%
TAATAGATATCCAATCCTCG+GGG + chr4.4:23826478-23826497 MS.gene33786:intron 35.0%
TAATTGACCATGCACAAAAG+TGG + chr4.4:23826098-23826117 MS.gene33786:CDS 35.0%
TATAGGTATTTGCTTCCAGA+AGG + chr4.4:23824869-23824888 MS.gene33786:CDS 35.0%
TATCATGTAATTTGGGTGAC+CGG + chr4.4:23827769-23827788 MS.gene33786:intron 35.0%
TCTCTTTGTAATACATGGGA+TGG + chr4.4:23828342-23828361 MS.gene33786:CDS 35.0%
TCTGGAAATTCTTCTGAGTT+GGG + chr4.4:23825304-23825323 MS.gene33786:CDS 35.0%
TGCTGATCTAAGTACTTTGA+AGG + chr4.4:23825937-23825956 MS.gene33786:CDS 35.0%
TTAAGCATAGCGCAATCTAT+TGG + chr4.4:23826061-23826080 MS.gene33786:CDS 35.0%
TTCAGTTTAGGTACTATTGG+AGG + chr4.4:23825145-23825164 MS.gene33786:CDS 35.0%
TTCCAGTGAAAATTCCATTG+CGG - chr4.4:23825987-23826006 None:intergenic 35.0%
TTTATTTCCATCATCTCTCG+AGG - chr4.4:23823971-23823990 None:intergenic 35.0%
! AATTAGATCTGGAACTAGAG+TGG + chr4.4:23825402-23825421 MS.gene33786:CDS 35.0%
! AATTCTTCTGAGTTGGGTAA+TGG + chr4.4:23825310-23825329 MS.gene33786:CDS 35.0%
! ACCATTTTCCCCAGAAATAA+CGG - chr4.4:23826564-23826583 None:intergenic 35.0%
! AGCAGCTTCTTTTATGCATT+TGG + chr4.4:23824382-23824401 MS.gene33786:intron 35.0%
! AGTATGAGCTTTTACAATGG+AGG - chr4.4:23826915-23826934 None:intergenic 35.0%
! CAGTAAATATTGAGGGTATG+CGG + chr4.4:23825224-23825243 MS.gene33786:CDS 35.0%
! CATTTCTAATTGATGGCTAC+CGG + chr4.4:23824106-23824125 MS.gene33786:intron 35.0%
! CTAATTGCACTTGTGCTTTT+GGG + chr4.4:23824499-23824518 MS.gene33786:intron 35.0%
! CTTCTTTTGCAAAGATCCAA+AGG + chr4.4:23826705-23826724 MS.gene33786:intron 35.0%
! GAAAGTGATGGAAACTGATT+GGG - chr4.4:23824046-23824065 None:intergenic 35.0%
! GCAGCTTCTTTTATGCATTT+GGG + chr4.4:23824383-23824402 MS.gene33786:intron 35.0%
! TCTAATTGCACTTGTGCTTT+TGG + chr4.4:23824498-23824517 MS.gene33786:intron 35.0%
! TGAAAGTGATGGAAACTGAT+TGG - chr4.4:23824047-23824066 None:intergenic 35.0%
! TTCTTTTATGCATTTGGGCT+AGG + chr4.4:23824388-23824407 MS.gene33786:intron 35.0%
!! AGGAGTATGAGCTTTTACAA+TGG - chr4.4:23826918-23826937 None:intergenic 35.0%
!! ATAGCTCTATTGCTATTTCG+CGG - chr4.4:23824080-23824099 None:intergenic 35.0%
!! CGAGAGATGATGGAAATAAA+AGG + chr4.4:23823971-23823990 MS.gene33786:intron 35.0%
!! GAGAACAAGTGATTGTTTTG+AGG - chr4.4:23825807-23825826 None:intergenic 35.0%
!! TATCCGTAAGTTTTTGGAAG+TGG + chr4.4:23825781-23825800 MS.gene33786:CDS 35.0%
!! TCATAATGCCGTTATTTCTG+GGG + chr4.4:23826553-23826572 MS.gene33786:intron 35.0%
!! TTCGTCACACTTTGATTTTC+TGG - chr4.4:23826415-23826434 None:intergenic 35.0%
!! TTGTAATTTCCTAATGGGCT+TGG + chr4.4:23824628-23824647 MS.gene33786:CDS 35.0%
!!! AGGAAGTTTTGGACTTTTCT+TGG - chr4.4:23825524-23825543 None:intergenic 35.0%
!!! ATGTTTTGAAAATGCCGCAA+TGG + chr4.4:23825970-23825989 MS.gene33786:CDS 35.0%
AACATTCAAGACCCAACAGA+TGG - chr4.4:23828052-23828071 None:intergenic 40.0%
AACCAACTTATAGGGTTCTC+TGG + chr4.4:23826014-23826033 MS.gene33786:CDS 40.0%
AACCACTGAATGGAAAATCC+CGG + chr4.4:23828167-23828186 MS.gene33786:CDS 40.0%
AAGAATACTGTGGATCTACG+AGG + chr4.4:23828253-23828272 MS.gene33786:CDS 40.0%
AAGATTGTTTCATCATCCCC+AGG - chr4.4:23827055-23827074 None:intergenic 40.0%
AAGTGTGACGAATGTTGTGA+AGG + chr4.4:23826423-23826442 MS.gene33786:intron 40.0%
ACATTCAAGACCCAACAGAT+GGG - chr4.4:23828051-23828070 None:intergenic 40.0%
ACCAACTTATAGGGTTCTCT+GGG + chr4.4:23826015-23826034 MS.gene33786:CDS 40.0%
AGCATTCACTTCCACTTCAA+TGG + chr4.4:23823489-23823508 MS.gene33786:CDS 40.0%
AGGCCACTTCCAAAAACTTA+CGG - chr4.4:23825787-23825806 None:intergenic 40.0%
AGGTTGCAATTCTGTTGAAG+AGG + chr4.4:23825165-23825184 MS.gene33786:CDS 40.0%
ATAGCCTCAAAACTCTCGAA+TGG + chr4.4:23823443-23823462 MS.gene33786:CDS 40.0%
CATTCACACAGGTTTGAACT+TGG + chr4.4:23823775-23823794 MS.gene33786:intron 40.0%
CCGCAGATATTGTAAGATAC+TGG - chr4.4:23825882-23825901 None:intergenic 40.0%
CCTATGCTCAATGGATGAAT+GGG + chr4.4:23825110-23825129 MS.gene33786:CDS 40.0%
CTATGCTCAATGGATGAATG+GGG + chr4.4:23825111-23825130 MS.gene33786:CDS 40.0%
CTCCAATATCTGCAAGGATA+AGG - chr4.4:23825555-23825574 None:intergenic 40.0%
CTTCCTTCAATAAAGAGTCC+AGG - chr4.4:23824760-23824779 None:intergenic 40.0%
GACATTCAATTACAGACTGC+AGG - chr4.4:23826613-23826632 None:intergenic 40.0%
GACCTTATCCTTGCAGATAT+TGG + chr4.4:23825550-23825569 MS.gene33786:CDS 40.0%
GATAAGACAGTTAGAGAGGA+AGG + chr4.4:23827335-23827354 MS.gene33786:intron 40.0%
GATAATGTCACACTAAGGTC+TGG + chr4.4:23825286-23825305 MS.gene33786:CDS 40.0%
GCAATCAAGGAATCATGCAT+TGG - chr4.4:23824206-23824225 None:intergenic 40.0%
GCATCACTTATGTCAAAAGC+CGG + chr4.4:23825484-23825503 MS.gene33786:CDS 40.0%
GCATTCACTTCCACTTCAAT+GGG + chr4.4:23823490-23823509 MS.gene33786:CDS 40.0%
GCATTCAGAACTATACCTTC+TGG - chr4.4:23824887-23824906 None:intergenic 40.0%
GGGAATAGTCAACAAACTAC+CGG - chr4.4:23823674-23823693 None:intergenic 40.0%
GGGCAATCTAATGAAAGTGA+TGG - chr4.4:23824058-23824077 None:intergenic 40.0%
GTCTGGAAATTCTTCTGAGT+TGG + chr4.4:23825303-23825322 MS.gene33786:CDS 40.0%
GTTAAAGGCTCAAGCTGAAA+AGG + chr4.4:23826198-23826217 MS.gene33786:CDS 40.0%
GTTCTGATCTAATGATCTCC+AGG - chr4.4:23824718-23824737 None:intergenic 40.0%
TAGACGTGAAACGATGCTTA+TGG + chr4.4:23826745-23826764 MS.gene33786:CDS 40.0%
TCTGTACACTAACGCTTTGA+AGG + chr4.4:23828082-23828101 MS.gene33786:intron 40.0%
TGAAACGATGCTTATGGCAA+AGG + chr4.4:23826751-23826770 MS.gene33786:CDS 40.0%
TGAAGAGGACAATGACATTG+CGG + chr4.4:23825180-23825199 MS.gene33786:CDS 40.0%
TGGGGATGATGAAACAATCT+TGG + chr4.4:23827054-23827073 MS.gene33786:CDS 40.0%
TGTCAAGGAAGAAAACAGAG+TGG + chr4.4:23827245-23827264 MS.gene33786:intron 40.0%
TGTTCATCTCTAAGTTACCC+CGG - chr4.4:23828189-23828208 None:intergenic 40.0%
TTAGAGATGAACAGCAGCAA+TGG + chr4.4:23828196-23828215 MS.gene33786:CDS 40.0%
TTAGTAAGAATTGGGGCATG+TGG + chr4.4:23827725-23827744 MS.gene33786:intron 40.0%
TTATGGCAAAGGAAGCTCAA+CGG + chr4.4:23826762-23826781 MS.gene33786:CDS 40.0%
TTGCATCCTCTAACTCTTGT+TGG - chr4.4:23826790-23826809 None:intergenic 40.0%
TTGGATATATCCAATAGCGG+AGG + chr4.4:23827643-23827662 MS.gene33786:intron 40.0%
TTGGGATAAGACAGTTAGAG+AGG + chr4.4:23827331-23827350 MS.gene33786:intron 40.0%
! ACTCTGTTTTCTTCCTTGAC+AGG - chr4.4:23827246-23827265 None:intergenic 40.0%
! AGGTCAAACCAAGGAAGTTT+TGG - chr4.4:23825535-23825554 None:intergenic 40.0%
! AGGTTTGATCGAGAAGCTTT+TGG - chr4.4:23823570-23823589 None:intergenic 40.0%
! AGTTCCATTCGAGAGTTTTG+AGG - chr4.4:23823450-23823469 None:intergenic 40.0%
! CAACAACAACTCGACTTTTC+TGG + chr4.4:23823610-23823629 MS.gene33786:CDS 40.0%
! CAAGGGACTGCAATTTTGAA+GGG - chr4.4:23825724-23825743 None:intergenic 40.0%
! CTCACGTATCCGTAAGTTTT+TGG + chr4.4:23825775-23825794 MS.gene33786:CDS 40.0%
! CTTATCTACTGAGTTGGGAA+CGG + chr4.4:23827308-23827327 MS.gene33786:intron 40.0%
! CTTTTGACATAAGTGATGCC+AGG - chr4.4:23825483-23825502 None:intergenic 40.0%
! GAAAAGTCGAGTTGTTGTTG+AGG - chr4.4:23823610-23823629 None:intergenic 40.0%
! GGGAGTATGTAAATAGCTAG+AGG + chr4.4:23827664-23827683 MS.gene33786:intron 40.0%
! GTTGATGTCGTTTAGAACCT+TGG - chr4.4:23824273-23824292 None:intergenic 40.0%
! TAGGCTTTCAAACTCTGAAG+CGG + chr4.4:23824973-23824992 MS.gene33786:CDS 40.0%
! TCAAGGGACTGCAATTTTGA+AGG - chr4.4:23825725-23825744 None:intergenic 40.0%
! TGGATATATCCAATAGCGGA+GGG + chr4.4:23827644-23827663 MS.gene33786:intron 40.0%
! TTGTTGTTGAGGAATGAGTC+TGG - chr4.4:23823599-23823618 None:intergenic 40.0%
! TTTTGCAAAGATCCAAAGGG+AGG + chr4.4:23826709-23826728 MS.gene33786:intron 40.0%
!! AACCCTATAAGTTGGTTGCA+AGG - chr4.4:23826011-23826030 None:intergenic 40.0%
!! AAGGGACTGCAATTTTGAAG+GGG - chr4.4:23825723-23825742 None:intergenic 40.0%
!! CTCTGGAGCAACATACTTTA+TGG + chr4.4:23824913-23824932 MS.gene33786:CDS 40.0%
!! GGGTAATGGAAATGGAACAA+TGG + chr4.4:23825324-23825343 MS.gene33786:CDS 40.0%
!! TAGCTCTATTGCTATTTCGC+GGG - chr4.4:23824079-23824098 None:intergenic 40.0%
!! TCTGAGTTGGGTAATGGAAA+TGG + chr4.4:23825316-23825335 MS.gene33786:CDS 40.0%
!!! AGTTTTGGACTTTTCTTGGC+AGG - chr4.4:23825520-23825539 None:intergenic 40.0%
!!! ATTTTGAAGTCAACTGGCAC+AGG - chr4.4:23825385-23825404 None:intergenic 40.0%
!!! TTCGAGAGTTTTGAGGCTAT+CGG - chr4.4:23823443-23823462 None:intergenic 40.0%
!!! TTTTGAAGTCAACTGGCACA+GGG - chr4.4:23825384-23825403 None:intergenic 40.0%
AAATAGCTAGAGGGGTTGAG+AGG + chr4.4:23827674-23827693 MS.gene33786:intron 45.0%
AACTGATCCTTCAGAAGGTG+TGG + chr4.4:23825847-23825866 MS.gene33786:CDS 45.0%
AAGCTATCCTCGAGAGATGA+TGG + chr4.4:23823961-23823980 MS.gene33786:intron 45.0%
AAGGAAAAGAGTGAGGGAGA+CGG - chr4.4:23826683-23826702 None:intergenic 45.0%
AAGGTTTGAAGGAGAAGCGA+GGG - chr4.4:23823384-23823403 None:intergenic 45.0%
AATAGCTAGAGGGGTTGAGA+GGG + chr4.4:23827675-23827694 MS.gene33786:intron 45.0%
ACCACTGAATGGAAAATCCC+GGG + chr4.4:23828168-23828187 MS.gene33786:CDS 45.0%
AGTGGAACTGATCCTTCAGA+AGG + chr4.4:23825842-23825861 MS.gene33786:CDS 45.0%
ATCTCAGGACCTAATACTGG+AGG + chr4.4:23825430-23825449 MS.gene33786:CDS 45.0%
CAAACTACCGGAAACAGCAA+CGG - chr4.4:23823662-23823681 None:intergenic 45.0%
CCAACTTATAGGGTTCTCTG+GGG + chr4.4:23826016-23826035 MS.gene33786:CDS 45.0%
CCCATTCATCCATTGAGCAT+AGG - chr4.4:23825113-23825132 None:intergenic 45.0%
GCAAGGATAAGGTCAAACCA+AGG - chr4.4:23825544-23825563 None:intergenic 45.0%
GCATCGTTTCACGTCTATCA+AGG - chr4.4:23826742-23826761 None:intergenic 45.0%
GCCTATGCTCAATGGATGAA+TGG + chr4.4:23825109-23825128 MS.gene33786:CDS 45.0%
GCTCTATCAGTCATTACAGG+AGG + chr4.4:23826165-23826184 MS.gene33786:CDS 45.0%
GGTGATCTCCAATATCTGCA+AGG - chr4.4:23825561-23825580 None:intergenic 45.0%
GGTTCAAAATGAGTGACACG+AGG - chr4.4:23828415-23828434 None:intergenic 45.0%
GTAGCAGAAGCAAGGTTTGA+AGG - chr4.4:23823395-23823414 None:intergenic 45.0%
GTCATCTCAGGACCTAATAC+TGG + chr4.4:23825427-23825446 MS.gene33786:CDS 45.0%
GTTCATCTCTAAGTTACCCC+GGG - chr4.4:23828188-23828207 None:intergenic 45.0%
GTTGCAGGATTCTTTGCACT+TGG - chr4.4:23827136-23827155 None:intergenic 45.0%
TAATACATGGGATGGGCACT+GGG + chr4.4:23828350-23828369 MS.gene33786:CDS 45.0%
TATGGCAAAGGAAGCTCAAC+GGG + chr4.4:23826763-23826782 MS.gene33786:CDS 45.0%
TCTCAGGACCTAATACTGGA+GGG + chr4.4:23825431-23825450 MS.gene33786:CDS 45.0%
TCTGCGGGAACATGTTAACT+TGG + chr4.4:23825895-23825914 MS.gene33786:CDS 45.0%
TGATAGAGCAAGTGAAGACC+TGG + chr4.4:23824697-23824716 MS.gene33786:CDS 45.0%
TGATGGAAACTGATTGGGAG+AGG - chr4.4:23824041-23824060 None:intergenic 45.0%
TGCAGATATTGGAGATCACC+AGG + chr4.4:23825561-23825580 MS.gene33786:CDS 45.0%
TGCTGAGAGTTGCTTGCATA+TGG - chr4.4:23823473-23823492 None:intergenic 45.0%
TTACATACTCCCTCCGCTAT+TGG - chr4.4:23827656-23827675 None:intergenic 45.0%
TTCAATGAAAACGTTGGGCC+TGG + chr4.4:23825462-23825481 MS.gene33786:CDS 45.0%
TTCTTAGATGTTTGCACCGC+TGG - chr4.4:23828238-23828257 None:intergenic 45.0%
! AACTAGTTCTCCCACTCATC+AGG + chr4.4:23827153-23827172 MS.gene33786:CDS 45.0%
! ACTAGTTCTCCCACTCATCA+GGG + chr4.4:23827154-23827173 MS.gene33786:CDS 45.0%
! CGCTGATTGTCATCTCAAGA+TGG - chr4.4:23828303-23828322 None:intergenic 45.0%
! GCAGTTTTCCCTCCAGTATT+AGG - chr4.4:23825442-23825461 None:intergenic 45.0%
! GTTTGTTGATGGGGATGAAG+AGG - chr4.4:23823354-23823373 None:intergenic 45.0%
! TAGATCTGGAACTAGAGTGG+TGG + chr4.4:23825405-23825424 MS.gene33786:CDS 45.0%
! TGCCGCAATGGAATTTTCAC+TGG + chr4.4:23825982-23826001 MS.gene33786:CDS 45.0%
!! AGAAGCTTTTGGCTGTCTGT+TGG - chr4.4:23823559-23823578 None:intergenic 45.0%
!! AGCTCTATTGCTATTTCGCG+GGG - chr4.4:23824078-23824097 None:intergenic 45.0%
!! AGGGATTGAGGGTTTGTTGA+TGG - chr4.4:23823365-23823384 None:intergenic 45.0%
!! ATTCTCTCCGTTGCTGTTTC+CGG + chr4.4:23823652-23823671 MS.gene33786:CDS 45.0%
!! GCCGTTATTTCTGGGGAAAA+TGG + chr4.4:23826560-23826579 MS.gene33786:intron 45.0%
!! GGATTGAGGGTTTGTTGATG+GGG - chr4.4:23823363-23823382 None:intergenic 45.0%
!! GGGATTGAGGGTTTGTTGAT+GGG - chr4.4:23823364-23823383 None:intergenic 45.0%
!! TGTTTTCTAGAGACGACTCC+AGG - chr4.4:23825261-23825280 None:intergenic 45.0%
!!! CGTCTCAAATTTTTCGGGCT+GGG + chr4.4:23824783-23824802 MS.gene33786:CDS 45.0%
!!! GAGTTTTGAGGCTATCGGAT+TGG - chr4.4:23823438-23823457 None:intergenic 45.0%
!!! GTCTCAAATTTTTCGGGCTG+GGG + chr4.4:23824784-23824803 MS.gene33786:CDS 45.0%
!!! TCGTCTCAAATTTTTCGGGC+TGG + chr4.4:23824782-23824801 MS.gene33786:CDS 45.0%
!!! TCTCAAATTTTTCGGGCTGG+GGG + chr4.4:23824785-23824804 MS.gene33786:CDS 45.0%
AAAGCTCATACTCCTGCCGT+TGG + chr4.4:23826923-23826942 MS.gene33786:CDS 50.0%
AACCAGAACAGCAGCAAGAG+CGG + chr4.4:23826134-23826153 MS.gene33786:CDS 50.0%
AAGAACACTCGCTGCTTCCA+GGG + chr4.4:23823711-23823730 MS.gene33786:CDS 50.0%
AAGGAGAAGCGAGGGATTGA+GGG - chr4.4:23823376-23823395 None:intergenic 50.0%
ACCTGCTTTCCCTGATGAGT+GGG - chr4.4:23827166-23827185 None:intergenic 50.0%
ACGGGTCCAACAAGAGTTAG+AGG + chr4.4:23826781-23826800 MS.gene33786:CDS 50.0%
ACTAGAGTGGTGGTCATCTC+AGG + chr4.4:23825415-23825434 MS.gene33786:CDS 50.0%
AGAGACGACTCCAGGAGTAA+TGG - chr4.4:23825253-23825272 None:intergenic 50.0%
AGCAGCGAGTGTTCTTCGAA+CGG - chr4.4:23823707-23823726 None:intergenic 50.0%
ATTTGCACCTGCCCATCTGT+TGG + chr4.4:23828037-23828056 MS.gene33786:intron 50.0%
CAAGAGCTGCCTATGCTCAA+TGG + chr4.4:23825101-23825120 MS.gene33786:CDS 50.0%
CAAGGTTTGAAGGAGAAGCG+AGG - chr4.4:23823385-23823404 None:intergenic 50.0%
CAAGTCCGTGTGAAGGGATT+GGG + chr4.4:23827001-23827020 MS.gene33786:CDS 50.0%
CACAGTGGTAGAATTGCCTG+GGG + chr4.4:23827036-23827055 MS.gene33786:CDS 50.0%
CCACAGTGGTAGAATTGCCT+GGG + chr4.4:23827035-23827054 MS.gene33786:CDS 50.0%
CCACTGAATGGAAAATCCCG+GGG + chr4.4:23828169-23828188 MS.gene33786:CDS 50.0%
CCCCAGAGAACCCTATAAGT+TGG - chr4.4:23826019-23826038 None:intergenic 50.0%
GAAAGAGCCACACCTTCTGA+AGG - chr4.4:23825857-23825876 None:intergenic 50.0%
GCAGGATTCTTTGCACTTGG+TGG - chr4.4:23827133-23827152 None:intergenic 50.0%
GGGAGGAAAATTAGCCACAG+TGG + chr4.4:23827021-23827040 MS.gene33786:CDS 50.0%
GTAATACATGGGATGGGCAC+TGG + chr4.4:23828349-23828368 MS.gene33786:CDS 50.0%
TACCTGCTTTCCCTGATGAG+TGG - chr4.4:23827167-23827186 None:intergenic 50.0%
TAGAATGTGCGTGGGCATCA+GGG + chr4.4:23824841-23824860 MS.gene33786:CDS 50.0%
TATGCGGCATCCATTACTCC+TGG + chr4.4:23825240-23825259 MS.gene33786:CDS 50.0%
TCGGTTGAGTAGCAGAAGCA+AGG - chr4.4:23823403-23823422 None:intergenic 50.0%
TCTTCGAACGGTGCAAAGCT+CGG - chr4.4:23823695-23823714 None:intergenic 50.0%
TGACCATGCACAAAAGTGGG+TGG + chr4.4:23826102-23826121 MS.gene33786:CDS 50.0%
TGAGTGGGAGAACTAGTTGC+AGG - chr4.4:23827151-23827170 None:intergenic 50.0%
TTCCTCCCAATCCCTTCACA+CGG - chr4.4:23827009-23827028 None:intergenic 50.0%
TTCGATAAGCTGTGCGACCA+AGG + chr4.4:23824253-23824272 MS.gene33786:intron 50.0%
TTGAGGAATGAGTCTGGCAG+CGG - chr4.4:23823593-23823612 None:intergenic 50.0%
TTTGCACCTGCCCATCTGTT+GGG + chr4.4:23828038-23828057 MS.gene33786:intron 50.0%
! AATACATGGGATGGGCACTG+GGG + chr4.4:23828351-23828370 MS.gene33786:CDS 50.0%
! AGGGTTCTCTGGGGATGTAT+TGG + chr4.4:23826025-23826044 MS.gene33786:CDS 50.0%
! CGGACTTGCTCTCCAAATTG+TGG - chr4.4:23826989-23827008 None:intergenic 50.0%
! CGTCGATCTAGAATGTGCGT+GGG + chr4.4:23824833-23824852 MS.gene33786:CDS 50.0%
! CTACTGAGTTGGGAACGGTT+GGG + chr4.4:23827313-23827332 MS.gene33786:intron 50.0%
! GCTATCGGATTGGACTGAGT+TGG - chr4.4:23823428-23823447 None:intergenic 50.0%
! GCTTCTAAAAGCGCGTCACA+AGG + chr4.4:23825346-23825365 MS.gene33786:CDS 50.0%
! GGATTGGACTGAGTTGGACT+CGG - chr4.4:23823422-23823441 None:intergenic 50.0%
! TCTACTGAGTTGGGAACGGT+TGG + chr4.4:23827312-23827331 MS.gene33786:intron 50.0%
!! TCTCCACCCACTTTTGTGCA+TGG - chr4.4:23826108-23826127 None:intergenic 50.0%
AATGCGATCAGCGCCACTGA+TGG - chr4.4:23826954-23826973 None:intergenic 55.0%
AGTACGTCCGACGGGTAAAC+GGG - chr4.4:23823536-23823555 None:intergenic 55.0%
ATGCGATCAGCGCCACTGAT+GGG - chr4.4:23826953-23826972 None:intergenic 55.0%
CAAGGTCTTCTGCCTCCCTT+TGG - chr4.4:23826724-23826743 None:intergenic 55.0%
CAATGACATTGCGGTCGTGC+AGG + chr4.4:23825189-23825208 MS.gene33786:CDS 55.0%
CCCAGGCAATTCTACCACTG+TGG - chr4.4:23827038-23827057 None:intergenic 55.0%
CTAGAATGTGCGTGGGCATC+AGG + chr4.4:23824840-23824859 MS.gene33786:CDS 55.0%
CTTCGAACGGTGCAAAGCTC+GGG - chr4.4:23823694-23823713 None:intergenic 55.0%
CTTGGCAGGCAGATGCATTC+CGG - chr4.4:23825506-23825525 None:intergenic 55.0%
GAAGAACACTCGCTGCTTCC+AGG + chr4.4:23823710-23823729 MS.gene33786:CDS 55.0%
GAAGGAGAAGCGAGGGATTG+AGG - chr4.4:23823377-23823396 None:intergenic 55.0%
GAGTACGTCCGACGGGTAAA+CGG - chr4.4:23823537-23823556 None:intergenic 55.0%
GAGTGAGGGAGACGGATAGA+CGG - chr4.4:23826675-23826694 None:intergenic 55.0%
GATGGGGATGAAGAGGTTGC+AGG - chr4.4:23823347-23823366 None:intergenic 55.0%
GCAAGTCCGTGTGAAGGGAT+TGG + chr4.4:23827000-23827019 MS.gene33786:CDS 55.0%
GCCACAGTGGTAGAATTGCC+TGG + chr4.4:23827034-23827053 MS.gene33786:CDS 55.0%
GCCACTGATGGGAGAACCAA+CGG - chr4.4:23826942-23826961 None:intergenic 55.0%
GGAGAGCAAGTCCGTGTGAA+GGG + chr4.4:23826995-23827014 MS.gene33786:CDS 55.0%
GGATCTACGAGGTATGCGAC+TGG + chr4.4:23828264-23828283 MS.gene33786:CDS 55.0%
GTATGTTGCTCCAGAGCTGC+TGG - chr4.4:23824909-23824928 None:intergenic 55.0%
GTCTGTTGGAGTACGTCCGA+CGG - chr4.4:23823545-23823564 None:intergenic 55.0%
TCAAGACCCAACAGATGGGC+AGG - chr4.4:23828047-23828066 None:intergenic 55.0%
TCCCACTCATCAGGGAAAGC+AGG + chr4.4:23827162-23827181 MS.gene33786:CDS 55.0%
TCTGTTGGAGTACGTCCGAC+GGG - chr4.4:23823544-23823563 None:intergenic 55.0%
TCTTGGCTATCCCCGAGGAT+TGG - chr4.4:23826491-23826510 None:intergenic 55.0%
TGAGGCACGGCATGATGTGT+TGG - chr4.4:23826457-23826476 None:intergenic 55.0%
TGGAGAGCAAGTCCGTGTGA+AGG + chr4.4:23826994-23827013 MS.gene33786:CDS 55.0%
TGGGCATCAGGGCTTCGTAT+AGG + chr4.4:23824852-23824871 MS.gene33786:CDS 55.0%
! CCCCGGGATTTTCCATTCAG+TGG - chr4.4:23828172-23828191 None:intergenic 55.0%
! GCGTCGATCTAGAATGTGCG+TGG + chr4.4:23824832-23824851 MS.gene33786:CDS 55.0%
! GTTCTGAATGCCAGCAGCTC+TGG + chr4.4:23824896-23824915 MS.gene33786:CDS 55.0%
!! TTCAAACTCTGAAGCGGCCG+AGG + chr4.4:23824979-23824998 MS.gene33786:CDS 55.0%
AACAGCGCCCGTTTACCCGT+CGG + chr4.4:23823526-23823545 MS.gene33786:CDS 60.0%
ACAGCTCTTGGCTATCCCCG+AGG - chr4.4:23826496-23826515 None:intergenic 60.0%
AGGAATGAGTCTGGCAGCGG+AGG - chr4.4:23823590-23823609 None:intergenic 60.0%
AGGGGTTGAGAGGGAGAGAC+CGG + chr4.4:23827684-23827703 MS.gene33786:intron 60.0%
CTCCGCTCTTGCTGCTGTTC+TGG - chr4.4:23826139-23826158 None:intergenic 60.0%
CTGATGGGAGAACCAACGGC+AGG - chr4.4:23826938-23826957 None:intergenic 60.0%
GAACAGCAGCAAGAGCGGAG+AGG + chr4.4:23826139-23826158 MS.gene33786:CDS 60.0%
GTCCGTGTGAAGGGATTGGG+AGG + chr4.4:23827004-23827023 MS.gene33786:CDS 60.0%
TCCTGCGCTCCAAGCCCATT+AGG - chr4.4:23824640-23824659 None:intergenic 60.0%
!! GCCGTTGGTTCTCCCATCAG+TGG + chr4.4:23826938-23826957 MS.gene33786:CDS 60.0%
!! TCCTAATGGGCTTGGAGCGC+AGG + chr4.4:23824636-23824655 MS.gene33786:CDS 60.0%
GGCGGAGGAGCCCATTGAAG+TGG - chr4.4:23823503-23823522 None:intergenic 65.0%
! GACGGGTAAACGGGCGCTGT+TGG - chr4.4:23823527-23823546 None:intergenic 65.0%
! GGGTAAACGGGCGCTGTTGG+CGG - chr4.4:23823524-23823543 None:intergenic 65.0%
! TAAACGGGCGCTGTTGGCGG+CGG - chr4.4:23823521-23823540 None:intergenic 65.0%
!! ACGGGCGCTGTTGGCGGCGG+AGG - chr4.4:23823518-23823537 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 23823334 23828480 23823334 ID=MS.gene33786
chr4.4 mRNA 23823334 23828480 23823334 ID=MS.gene33786.t1;Parent=MS.gene33786
chr4.4 exon 23823334 23823785 23823334 ID=MS.gene33786.t1.exon1;Parent=MS.gene33786.t1
chr4.4 CDS 23823334 23823785 23823334 ID=cds.MS.gene33786.t1;Parent=MS.gene33786.t1
chr4.4 exon 23824598 23825582 23824598 ID=MS.gene33786.t1.exon2;Parent=MS.gene33786.t1
chr4.4 CDS 23824598 23825582 23824598 ID=cds.MS.gene33786.t1;Parent=MS.gene33786.t1
chr4.4 exon 23825737 23826261 23825737 ID=MS.gene33786.t1.exon3;Parent=MS.gene33786.t1
chr4.4 CDS 23825737 23826261 23825737 ID=cds.MS.gene33786.t1;Parent=MS.gene33786.t1
chr4.4 exon 23826719 23827183 23826719 ID=MS.gene33786.t1.exon4;Parent=MS.gene33786.t1
chr4.4 CDS 23826719 23827183 23826719 ID=cds.MS.gene33786.t1;Parent=MS.gene33786.t1
chr4.4 exon 23828166 23828480 23828166 ID=MS.gene33786.t1.exon5;Parent=MS.gene33786.t1
chr4.4 CDS 23828166 23828480 23828166 ID=cds.MS.gene33786.t1;Parent=MS.gene33786.t1
Gene Sequence

>MS.gene33786

ATGCAACTCACCTGCAACCTCTTCATCCCCATCAACAAACCCTCAATCCCTCGCTTCTCCTTCAAACCTTGCTTCTGCTACTCAACCGAGTCCAACTCAGTCCAATCCGATAGCCTCAAAACTCTCGAATGGAACTCCATATGCAAGCAACTCTCAGCATTCACTTCCACTTCAATGGGCTCCTCCGCCGCCAACAGCGCCCGTTTACCCGTCGGACGTACTCCAACAGACAGCCAAAAGCTTCTCGATCAAACCTCCGCTGCCAGACTCATTCCTCAACAACAACTCGACTTTTCTGGAATACATGACTTGACTGACATTCTCTCCGTTGCTGTTTCCGGTAGTTTGTTGACTATTCCCGAGCTTTGCACCGTTCGAAGAACACTCGCTGCTTCCAGGGAATTGTTTGATAGTTTGAAACACTTGGCTTCTGTATCTAATCATTCACACAGGTTTGAACTTGGAATCTAACTCAAAAACTCAATAGTTTAAGACATGTTTGGATAAACAACTTAACAAAGTGCTTATCATACAAGTGATTATGTATTATGTTTGAAGTTAGTAGTTCGATAACAAAAGATAAAATAAAATCAAATTGTTTTTATATAAGCTAGAAGATGTTTTCATAAGCTATCCTCGAGAGATGATGGAAATAAAAGGAAACAGTTTATGGGCACATCATAATCTATTAACATGTTACATAACCTCTCCCAATCAGTTTCCATCACTTTCATTAGATTGCCCCGCGAAATAGCAATAGAGCTATTTCAGACATTTCTAATTGATGGCTACCGGTAGATTAGCTCAAATAAGTCAATCCAAACATACGCTAAGTAATAGTTGTTTTAAGCAACACTTATTCATTCTTACCAATGCATGATTCCTTGATTGCTTAGAGAATTTCTGTATGGAGATTAAATTCGATAAGCTGTGCGACCAAGGTTCTAAACGACATCAACGTTTTTGATGTCTATGGGAAGTCATATCAGTCAGTTTGAGTGCACTACAAGTTTTTTTTTTTTCTTTTCATAATCTGATTCAGTTCACAAGCAGCTTCTTTTATGCATTTGGGCTAGGTGTTGTATTTTTCTTGACAAAGTTCGGAGCATAGATCATTTCATAATGTCATGTCCCAATAAGGTCTTAAAAGAGTGTTAGTAATACTCTAATTGCACTTGTGCTTTTGGGCATAACTGATTCCTTTTACAAATCCAAAGTAAAAGTTCACAAAAATAACTTCGCTGATGCAATTGTTTTCAATTAGGTACTCACCCCTTCTTGAAATACTGCAAAATTGTAATTTCCTAATGGGCTTGGAGCGCAGGATAGAATTTTGCATAGATTGCAATCTTTTGGTAATTCTTGATAGAGCAAGTGAAGACCTGGAGATCATTAGATCAGAACGAAAAAGGAACATAGAAATCCTGGACTCTTTATTGAAGGAAGTATCGTCTCAAATTTTTCGGGCTGGGGGTATTGACAGACCATTTATTACTAAGCGTCGATCTAGAATGTGCGTGGGCATCAGGGCTTCGTATAGGTATTTGCTTCCAGAAGGTATAGTTCTGAATGCCAGCAGCTCTGGAGCAACATACTTTATGGAACCGAAAGAAGCAATAGATTTGAACAACATGGAAGTTAGGCTTTCAAACTCTGAAGCGGCCGAGGAAAGAGCAATTTTGAGTATGCTTGCATCTGAAATAGCAAATTCAGAATCAGAGATAAAATATTTGTTGGATAAAATTCTTGAGATTGATCTTGCTTTTGCAAGAGCTGCCTATGCTCAATGGATGAATGGGGTATGTCCAATTTTCAGTTTAGGTACTATTGGAGGTTGCAATTCTGTTGAAGAGGACAATGACATTGCGGTCGTGCAGGATGACGATTTAACAGTAAATATTGAGGGTATGCGGCATCCATTACTCCTGGAGTCGTCTCTAGAAAACATTTCAGATAATGTCACACTAAGGTCTGGAAATTCTTCTGAGTTGGGTAATGGAAATGGAACAATGGCTTCTAAAAGCGCGTCACAAGGCATAACAGACTTCCCTGTGCCAGTTGACTTCAAAATTAGATCTGGAACTAGAGTGGTGGTCATCTCAGGACCTAATACTGGAGGGAAAACTGCTTCAATGAAAACGTTGGGCCTGGCATCACTTATGTCAAAAGCCGGAATGCATCTGCCTGCCAAGAAAAGTCCAAAACTTCCTTGGTTTGACCTTATCCTTGCAGATATTGGAGATCACCAGGTAATATCTGAACTTTTTTATGCATGATGAAGATTTTTTATTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTCATGTGGCTGTTTCATTTGTGTCTGATCTTTTTCTCCCCTTCAAAATTGCAGTCCCTTGAACAAAATCTCTCAACTTTTAGTGGGCACATCTCACGTATCCGTAAGTTTTTGGAAGTGGCCTCAAAACAATCACTTGTTCTCATTGATGAAATTGGTAGTGGAACTGATCCTTCAGAAGGTGTGGCTCTTTCTGCCAGTATCTTACAATATCTGCGGGAACATGTTAACTTGGCTGTTGTGACCACTCATTATGCTGATCTAAGTACTTTGAAGGAAAGGGATACATGTTTTGAAAATGCCGCAATGGAATTTTCACTGGAAACCTTGCAACCAACTTATAGGGTTCTCTGGGGATGTATTGGTGATTCAAATGCATTAAGCATAGCGCAATCTATTGGCTTTGATAAAAATATAATTGACCATGCACAAAAGTGGGTGGAGAAATTAAAACCAGAACAGCAGCAAGAGCGGAGAGGAATGCTCTATCAGTCATTACAGGAGGAAAAAAATCGGTTAAAGGCTCAAGCTGAAAAGGCTGCTTCCATTCATGCAGAAATTATGAACGTGTACTCTGAGGTACAATCTAGCTGTTCAGTTAGAAATAGATAATGTGTTTCTTTATTATAGTTTCTTCTCCTTGGTCCATATAGTATGATAATCATTATTGTCCCTTTTAAAGTTTATCTGAAATTTGCATCGTTCATAAGTAATGACTCAGTAAATTGACCAGAAAATCAAAGTGTGACGAATGTTGTGAAGGTCTTTTGACCAACACATCATGCCGTGCCTCATTAATAGATATCCAATCCTCGGGGATAGCCAAGAGCTGTTAATTTAAATATGTAGCGCCTCTTCCATCCAAAATTTTCATAATGCCGTTATTTCTGGGGAAAATGGTTCAGCGTAAGAATTGTAGAGCATTTGCCTGCAGTCTGTAATTGAATGTCATCATATTTGCTGTTGCTAATTGCTTTGCACTTTCTTGGCCGTCTATCCGTCTCCCTCACTCTTTTCCTTTTCTTCTTTTGCAAAGATCCAAAGGGAGGCAGAAGACCTTGATAGACGTGAAACGATGCTTATGGCAAAGGAAGCTCAACGGGTCCAACAAGAGTTAGAGGATGCAAAATCTCAAATGGAAATTGTAATACAGAAATTCGAAAAGCAACTAAAAGATTTGGGACGCAACCAACTCAATTCAATAATTAAAGAATCTGAAACTGCAATTGCCTCCATTGTAAAAGCTCATACTCCTGCCGTTGGTTCTCCCATCAGTGGCGCTGATCGCATTACATCATATACTCCACAATTTGGAGAGCAAGTCCGTGTGAAGGGATTGGGAGGAAAATTAGCCACAGTGGTAGAATTGCCTGGGGATGATGAAACAATCTTGGTACAGTATGGTAAAGTGAAAGTACGTGTGAAGAAAAATCGCATCAGAGCTATTCCACCAAGTGCAAAGAATCCTGCAACTAGTTCTCCCACTCATCAGGGAAAGCAGGTATGTACAAAGAAATCTTTGCTGTCATATAAATAATCTAATTCAATTAATATAGTTAACCTGTCAAGGAAGAAAACAGAGTGGTATACGTTTCCATTAAGAAAGTTATTTTGCAAGCAGTAATCTTATCTACTGAGTTGGGAACGGTTGGGATAAGACAGTTAGAGAGGAAGGTTACTTCCTCTAGTTTCAAATATAATAAGAAGAAAAAAAGTAGTTCGCGCTAGTTAAGAATACTATAAAATCATATTTAATTTTTTGATGTAATAAAAAATATATTGTATTATCTAAAATATTCTTCGTGGAAACTTGTTTCATATAAGTAAAAGAAGTTATTGGAAAATGAAATCCAAATTTTATTGAAAGGTATTTTATATTTAATCTGGCATTTTTTCTTTTGAAGTAATGGTAAAATTAATTTAGAATTGATATATTTTGGATCCCCAAACATAGACTTTTTTGGATATATCCAATAGCGGAGGGAGTATGTAAATAGCTAGAGGGGTTGAGAGGGAGAGACCGGAGAGTATTTGTTACTATTTTAGTAAGAATTGGGGCATGTGGAGTTGTAGATCCTCGTTGTTCTATCATGTAATTTGGGTGACCGGAGAGTATTTGTTACTATTTTAGTAAGAATTGGGGCATGTGGAGTTGTAGATCCTCGTTGTTCTATCATGTAATTTGGGTAGCTTTCTCCTGTTTTTCTGTAATAAATACCAGGTTCCTAACATCATATTTGGAAATTGGAACTTCAGATCATCCTATAATATAGGCACATTGAATTGAATTTTCTATAAAATTAATCTGTCTCCTTTTTAAAATTGGCTTCTTAACCTAATTTGATTTAGACAAAATTTGCACCTGCCCATCTGTTGGGTCTTGAATGTTTGTAGAATTTTCTGTACACTAACGCTTTGAAGGATGACAGTAATTGATCTATATCAAACTGCTGAGTTTGAACACTGTTGATTTACTATTGTAGAAACCACTGAATGGAAAATCCCGGGGTAACTTAGAGATGAACAGCAGCAATGGTGATATTTATTATGGTCCAGCGGTGCAAACATCTAAGAATACTGTGGATCTACGAGGTATGCGACTGGAAGAAGCTGCGATCCATCTTGAGATGACAATCAGCGCAAGTCAGCCATATTCAGTTCTCTTTGTAATACATGGGATGGGCACTGGGGCTGTTAAAGATCGTGCACTTGCTATTCTGCAAAAGCATCCTCGTGTCACTCATTTTGAACCAGAAAGTCCAATGAATTATGGATGTACTGTTGCACGTGTTAAGTGA
Protein sequence

>MS.gene33786.t1

MQLTCNLFIPINKPSIPRFSFKPCFCYSTESNSVQSDSLKTLEWNSICKQLSAFTSTSMGSSAANSARLPVGRTPTDSQKLLDQTSAARLIPQQQLDFSGIHDLTDILSVAVSGSLLTIPELCTVRRTLAASRELFDSLKHLASVSNHSHRYSPLLEILQNCNFLMGLERRIEFCIDCNLLVILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFRAGGIDRPFITKRRSRMCVGIRASYRYLLPEGIVLNASSSGATYFMEPKEAIDLNNMEVRLSNSEAAEERAILSMLASEIANSESEIKYLLDKILEIDLAFARAAYAQWMNGVCPIFSLGTIGGCNSVEEDNDIAVVQDDDLTVNIEGMRHPLLLESSLENISDNVTLRSGNSSELGNGNGTMASKSASQGITDFPVPVDFKIRSGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKSPKLPWFDLILADIGDHQSLEQNLSTFSGHISRIRKFLEVASKQSLVLIDEIGSGTDPSEGVALSASILQYLREHVNLAVVTTHYADLSTLKERDTCFENAAMEFSLETLQPTYRVLWGCIGDSNALSIAQSIGFDKNIIDHAQKWVEKLKPEQQQERRGMLYQSLQEEKNRLKAQAEKAASIHAEIMNVYSEIQREAEDLDRRETMLMAKEAQRVQQELEDAKSQMEIVIQKFEKQLKDLGRNQLNSIIKESETAIASIVKAHTPAVGSPISGADRITSYTPQFGEQVRVKGLGGKLATVVELPGDDETILVQYGKVKVRVKKNRIRAIPPSAKNPATSSPTHQGKQKPLNGKSRGNLEMNSSNGDIYYGPAVQTSKNTVDLRGMRLEEAAIHLEMTISASQPYSVLFVIHGMGTGAVKDRALAILQKHPRVTHFEPESPMNYGCTVARVK