Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20427.t1 | RHN50061.1 | 100 | 244 | 0 | 0 | 1 | 244 | 11 | 254 | 4.50E-144 | 520.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20427.t1 | Q9LDR9 | 77.6 | 250 | 46 | 2 | 1 | 242 | 1 | 248 | 1.5e-111 | 403.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20427.t1 | G7KKW0 | 100.0 | 244 | 0 | 0 | 1 | 244 | 1 | 244 | 3.3e-144 | 520.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene20427 | 0.837921 | 3.91E-57 | -1.69E-46 |
| MS.gene049171 | MS.gene20427 | 0.827989 | 1.15E-54 | -1.69E-46 |
| MS.gene049173 | MS.gene20427 | 0.805544 | 1.27E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene20427 | 0.857795 | 1.28E-62 | -1.69E-46 |
| MS.gene049222 | MS.gene20427 | 0.841993 | 3.39E-58 | -1.69E-46 |
| MS.gene049285 | MS.gene20427 | 0.848936 | 4.46E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene20427 | 0.842987 | 1.85E-58 | -1.69E-46 |
| MS.gene049356 | MS.gene20427 | 0.805929 | 1.05E-49 | -1.69E-46 |
| MS.gene049369 | MS.gene20427 | 0.824523 | 7.71E-54 | -1.69E-46 |
| MS.gene049396 | MS.gene20427 | 0.817161 | 3.81E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene20427 | 0.853975 | 1.67E-61 | -1.69E-46 |
| MS.gene049488 | MS.gene20427 | 0.831004 | 2.13E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene20427 | 0.872652 | 2.70E-67 | -1.69E-46 |
| MS.gene049633 | MS.gene20427 | 0.823188 | 1.58E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene20427 | 0.804598 | 2.00E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene20427 | 0.858826 | 6.31E-63 | -1.69E-46 |
| MS.gene050163 | MS.gene20427 | 0.809987 | 1.44E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene20427 | 0.835318 | 1.80E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene20427 | 0.808157 | 3.56E-50 | -1.69E-46 |
| MS.gene050518 | MS.gene20427 | 0.806565 | 7.73E-50 | -1.69E-46 |
| MS.gene050520 | MS.gene20427 | 0.807779 | 4.28E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene20427 | 0.831116 | 2.00E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene20427 | 0.80665 | 7.42E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene20427 | 0.866207 | 3.38E-65 | -1.69E-46 |
| MS.gene050612 | MS.gene20427 | 0.818637 | 1.77E-52 | -1.69E-46 |
| MS.gene050662 | MS.gene20427 | 0.823172 | 1.60E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene20427 | 0.823788 | 1.15E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene20427 | 0.812527 | 4.05E-51 | -1.69E-46 |
| MS.gene050686 | MS.gene20427 | 0.826324 | 2.89E-54 | -1.69E-46 |
| MS.gene050699 | MS.gene20427 | 0.840625 | 7.77E-58 | -1.69E-46 |
| MS.gene050747 | MS.gene20427 | 0.845876 | 3.09E-59 | -1.69E-46 |
| MS.gene050772 | MS.gene20427 | 0.889032 | 3.48E-73 | -1.69E-46 |
| MS.gene05080 | MS.gene20427 | 0.806957 | 6.39E-50 | -1.69E-46 |
| MS.gene05081 | MS.gene20427 | 0.841785 | 3.85E-58 | -1.69E-46 |
| MS.gene050868 | MS.gene20427 | 0.808612 | 2.84E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene20427 | 0.808402 | 3.15E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene20427 | 0.847524 | 1.10E-59 | -1.69E-46 |
| MS.gene05100 | MS.gene20427 | 0.804009 | 2.65E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene20427 | 0.857024 | 2.16E-62 | -1.69E-46 |
| MS.gene051255 | MS.gene20427 | 0.821438 | 4.04E-53 | -1.69E-46 |
| MS.gene051387 | MS.gene20427 | 0.852622 | 4.09E-61 | -1.69E-46 |
| MS.gene051551 | MS.gene20427 | 0.815754 | 7.86E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene20427 | 0.851028 | 1.16E-60 | -1.69E-46 |
| MS.gene051692 | MS.gene20427 | 0.859391 | 4.27E-63 | -1.69E-46 |
| MS.gene051694 | MS.gene20427 | 0.816374 | 5.71E-52 | -1.69E-46 |
| MS.gene051734 | MS.gene20427 | 0.826842 | 2.17E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene20427 | 0.841587 | 4.34E-58 | -1.69E-46 |
| MS.gene051838 | MS.gene20427 | 0.830375 | 3.04E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene20427 | 0.866511 | 2.70E-65 | -1.69E-46 |
| MS.gene052136 | MS.gene20427 | 0.806329 | 8.67E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene20427 | 0.807873 | 4.09E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene20427 | 0.88095 | 3.60E-70 | -1.69E-46 |
| MS.gene052310 | MS.gene20427 | 0.827071 | 1.92E-54 | -1.69E-46 |
| MS.gene052322 | MS.gene20427 | 0.82746 | 1.55E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene20427 | 0.807276 | 5.47E-50 | -1.69E-46 |
| MS.gene052346 | MS.gene20427 | 0.823467 | 1.36E-53 | -1.69E-46 |
| MS.gene052379 | MS.gene20427 | 0.833342 | 5.63E-56 | -1.69E-46 |
| MS.gene052414 | MS.gene20427 | 0.824747 | 6.83E-54 | -1.69E-46 |
| MS.gene052421 | MS.gene20427 | 0.845184 | 4.76E-59 | -1.69E-46 |
| MS.gene052481 | MS.gene20427 | 0.874636 | 5.78E-68 | -1.69E-46 |
| MS.gene052484 | MS.gene20427 | 0.870737 | 1.16E-66 | -1.69E-46 |
| MS.gene052485 | MS.gene20427 | 0.849254 | 3.64E-60 | -1.69E-46 |
| MS.gene052486 | MS.gene20427 | 0.804249 | 2.37E-49 | -1.69E-46 |
| MS.gene052501 | MS.gene20427 | 0.832891 | 7.30E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene20427 | 0.832091 | 1.15E-55 | -1.69E-46 |
| MS.gene052505 | MS.gene20427 | 0.827925 | 1.19E-54 | -1.69E-46 |
| MS.gene052506 | MS.gene20427 | 0.80697 | 6.35E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene20427 | 0.891286 | 4.56E-74 | -1.69E-46 |
| MS.gene052822 | MS.gene20427 | 0.808731 | 2.68E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene20427 | 0.825713 | 4.03E-54 | -1.69E-46 |
| MS.gene052825 | MS.gene20427 | 0.818025 | 2.43E-52 | -1.69E-46 |
| MS.gene052870 | MS.gene20427 | 0.839512 | 1.52E-57 | -1.69E-46 |
| MS.gene052872 | MS.gene20427 | 0.846521 | 2.06E-59 | -1.69E-46 |
| MS.gene052916 | MS.gene20427 | 0.810134 | 1.34E-50 | -1.69E-46 |
| MS.gene052999 | MS.gene20427 | 0.805384 | 1.37E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene20427 | 0.817067 | 4.00E-52 | -1.69E-46 |
| MS.gene053104 | MS.gene20427 | 0.841244 | 5.35E-58 | -1.69E-46 |
| MS.gene053203 | MS.gene20427 | 0.817736 | 2.82E-52 | -1.69E-46 |
| MS.gene053207 | MS.gene20427 | 0.843988 | 9.98E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene20427 | 0.881984 | 1.52E-70 | -1.69E-46 |
| MS.gene053286 | MS.gene20427 | 0.872423 | 3.22E-67 | -1.69E-46 |
| MS.gene053322 | MS.gene20427 | 0.832421 | 9.55E-56 | -1.69E-46 |
| MS.gene053436 | MS.gene20427 | 0.832603 | 8.60E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene20427 | 0.850082 | 2.14E-60 | -1.69E-46 |
| MS.gene053480 | MS.gene20427 | 0.827378 | 1.62E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene20427 | 0.870256 | 1.67E-66 | -1.69E-46 |
| MS.gene053632 | MS.gene20427 | 0.840869 | 6.71E-58 | -1.69E-46 |
| MS.gene053758 | MS.gene20427 | 0.828046 | 1.12E-54 | -1.69E-46 |
| MS.gene053813 | MS.gene20427 | 0.86218 | 6.08E-64 | -1.69E-46 |
| MS.gene053824 | MS.gene20427 | 0.846761 | 1.77E-59 | -1.69E-46 |
| MS.gene053912 | MS.gene20427 | 0.807154 | 5.80E-50 | -1.69E-46 |
| MS.gene053916 | MS.gene20427 | 0.814183 | 1.75E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene20427 | 0.830135 | 3.48E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene20427 | 0.818888 | 1.55E-52 | -1.69E-46 |
| MS.gene054600 | MS.gene20427 | 0.838898 | 2.19E-57 | -1.69E-46 |
| MS.gene054642 | MS.gene20427 | 0.859727 | 3.38E-63 | -1.69E-46 |
| MS.gene054742 | MS.gene20427 | -0.804023 | 2.64E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene20427 | 0.834208 | 3.42E-56 | -1.69E-46 |
| MS.gene05494 | MS.gene20427 | 0.806116 | 9.62E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene20427 | 0.817066 | 4.00E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene20427 | 0.863352 | 2.65E-64 | -1.69E-46 |
| MS.gene055116 | MS.gene20427 | 0.823946 | 1.05E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene20427 | 0.874215 | 8.04E-68 | -1.69E-46 |
| MS.gene055212 | MS.gene20427 | 0.801998 | 6.91E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene20427 | 0.829399 | 5.26E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene20427 | 0.801769 | 7.70E-49 | -1.69E-46 |
| MS.gene055289 | MS.gene20427 | 0.850956 | 1.21E-60 | -1.69E-46 |
| MS.gene055362 | MS.gene20427 | 0.836949 | 6.93E-57 | -1.69E-46 |
| MS.gene055397 | MS.gene20427 | 0.815185 | 1.05E-51 | -1.69E-46 |
| MS.gene055412 | MS.gene20427 | 0.809664 | 1.69E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene20427 | 0.801156 | 1.03E-48 | -1.69E-46 |
| MS.gene055502 | MS.gene20427 | 0.852242 | 5.25E-61 | -1.69E-46 |
| MS.gene055577 | MS.gene20427 | 0.828315 | 9.62E-55 | -1.69E-46 |
| MS.gene055647 | MS.gene20427 | 0.860228 | 2.39E-63 | -1.69E-46 |
| MS.gene055722 | MS.gene20427 | 0.877913 | 4.29E-69 | -1.69E-46 |
| MS.gene055909 | MS.gene20427 | 0.833588 | 4.89E-56 | -1.69E-46 |
| MS.gene055911 | MS.gene20427 | 0.839572 | 1.46E-57 | -1.69E-46 |
| MS.gene05592 | MS.gene20427 | 0.850528 | 1.60E-60 | -1.69E-46 |
| MS.gene055941 | MS.gene20427 | 0.841746 | 3.94E-58 | -1.69E-46 |
| MS.gene056083 | MS.gene20427 | 0.809686 | 1.67E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene20427 | 0.829592 | 4.72E-55 | -1.69E-46 |
| MS.gene056191 | MS.gene20427 | 0.842798 | 2.08E-58 | -1.69E-46 |
| MS.gene056374 | MS.gene20427 | 0.861966 | 7.07E-64 | -1.69E-46 |
| MS.gene056410 | MS.gene20427 | 0.819085 | 1.40E-52 | -1.69E-46 |
| MS.gene056422 | MS.gene20427 | 0.822691 | 2.07E-53 | -1.69E-46 |
| MS.gene056448 | MS.gene20427 | 0.825233 | 5.24E-54 | -1.69E-46 |
| MS.gene056487 | MS.gene20427 | 0.834299 | 3.25E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene20427 | 0.819502 | 1.12E-52 | -1.69E-46 |
| MS.gene056510 | MS.gene20427 | 0.806667 | 7.36E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene20427 | 0.871051 | 9.18E-67 | -1.69E-46 |
| MS.gene056549 | MS.gene20427 | 0.819593 | 1.07E-52 | -1.69E-46 |
| MS.gene056609 | MS.gene20427 | 0.808636 | 2.81E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene20427 | 0.859606 | 3.68E-63 | -1.69E-46 |
| MS.gene05666 | MS.gene20427 | 0.810094 | 1.37E-50 | -1.69E-46 |
| MS.gene056877 | MS.gene20427 | 0.80578 | 1.13E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene20427 | 0.814852 | 1.25E-51 | -1.69E-46 |
| MS.gene056942 | MS.gene20427 | 0.822497 | 2.30E-53 | -1.69E-46 |
| MS.gene056946 | MS.gene20427 | 0.840923 | 6.49E-58 | -1.69E-46 |
| MS.gene057011 | MS.gene20427 | 0.831489 | 1.62E-55 | -1.69E-46 |
| MS.gene057048 | MS.gene20427 | 0.812148 | 4.91E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene20427 | 0.872925 | 2.19E-67 | -1.69E-46 |
| MS.gene057086 | MS.gene20427 | 0.819228 | 1.30E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene20427 | 0.803301 | 3.72E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene20427 | 0.83332 | 5.71E-56 | -1.69E-46 |
| MS.gene057146 | MS.gene20427 | 0.849997 | 2.26E-60 | -1.69E-46 |
| MS.gene057196 | MS.gene20427 | 0.815931 | 7.18E-52 | -1.69E-46 |
| MS.gene057285 | MS.gene20427 | 0.802312 | 5.96E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene20427 | 0.857012 | 2.18E-62 | -1.69E-46 |
| MS.gene057332 | MS.gene20427 | 0.800438 | 1.44E-48 | -1.69E-46 |
| MS.gene057416 | MS.gene20427 | 0.881778 | 1.81E-70 | -1.69E-46 |
| MS.gene057658 | MS.gene20427 | 0.81109 | 8.33E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene20427 | 0.829479 | 5.03E-55 | -1.69E-46 |
| MS.gene057749 | MS.gene20427 | 0.835035 | 2.12E-56 | -1.69E-46 |
| MS.gene057823 | MS.gene20427 | 0.83445 | 2.98E-56 | -1.69E-46 |
| MS.gene057831 | MS.gene20427 | 0.807939 | 3.96E-50 | -1.69E-46 |
| MS.gene057856 | MS.gene20427 | 0.836766 | 7.72E-57 | -1.69E-46 |
| MS.gene057857 | MS.gene20427 | 0.805051 | 1.61E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene20427 | 0.839959 | 1.16E-57 | -1.69E-46 |
| MS.gene058006 | MS.gene20427 | 0.805139 | 1.54E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene20427 | 0.815974 | 7.02E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene20427 | 0.848785 | 4.91E-60 | -1.69E-46 |
| MS.gene058130 | MS.gene20427 | 0.835046 | 2.11E-56 | -1.69E-46 |
| MS.gene058323 | MS.gene20427 | 0.800579 | 1.35E-48 | -1.69E-46 |
| MS.gene058338 | MS.gene20427 | 0.839586 | 1.45E-57 | -1.69E-46 |
| MS.gene058376 | MS.gene20427 | 0.819372 | 1.20E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene20427 | 0.819551 | 1.09E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene20427 | 0.868301 | 7.23E-66 | -1.69E-46 |
| MS.gene058444 | MS.gene20427 | 0.821495 | 3.92E-53 | -1.69E-46 |
| MS.gene058544 | MS.gene20427 | 0.827601 | 1.43E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene20427 | 0.814727 | 1.33E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene20427 | 0.826206 | 3.08E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene20427 | 0.806955 | 6.40E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene20427 | 0.82993 | 3.91E-55 | -1.69E-46 |
| MS.gene05883 | MS.gene20427 | 0.840765 | 7.14E-58 | -1.69E-46 |
| MS.gene058928 | MS.gene20427 | 0.825835 | 3.77E-54 | -1.69E-46 |
| MS.gene058995 | MS.gene20427 | 0.812056 | 5.14E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene20427 | 0.821393 | 4.14E-53 | -1.69E-46 |
| MS.gene059023 | MS.gene20427 | 0.845685 | 3.48E-59 | -1.69E-46 |
| MS.gene059029 | MS.gene20427 | 0.81226 | 4.64E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene20427 | 0.811921 | 5.50E-51 | -1.69E-46 |
| MS.gene059141 | MS.gene20427 | 0.80486 | 1.76E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene20427 | 0.842197 | 3.00E-58 | -1.69E-46 |
| MS.gene059367 | MS.gene20427 | 0.803048 | 4.20E-49 | -1.69E-46 |
| MS.gene059368 | MS.gene20427 | 0.804596 | 2.00E-49 | -1.69E-46 |
| MS.gene059455 | MS.gene20427 | 0.835863 | 1.31E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene20427 | 0.860798 | 1.61E-63 | -1.69E-46 |
| MS.gene059674 | MS.gene20427 | 0.819628 | 1.05E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene20427 | 0.83608 | 1.15E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene20427 | 0.842677 | 2.23E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene20427 | 0.834535 | 2.83E-56 | -1.69E-46 |
| MS.gene059695 | MS.gene20427 | 0.83796 | 3.82E-57 | -1.69E-46 |
| MS.gene059711 | MS.gene20427 | 0.837718 | 4.41E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene20427 | 0.84409 | 9.38E-59 | -1.69E-46 |
| MS.gene059756 | MS.gene20427 | 0.825045 | 5.81E-54 | -1.69E-46 |
| MS.gene059807 | MS.gene20427 | 0.801859 | 7.38E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene20427 | 0.814548 | 1.46E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene20427 | 0.861366 | 1.08E-63 | -1.69E-46 |
| MS.gene059960 | MS.gene20427 | 0.831072 | 2.05E-55 | -1.69E-46 |
| MS.gene060193 | MS.gene20427 | 0.819321 | 1.24E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene20427 | 0.848505 | 5.87E-60 | -1.69E-46 |
| MS.gene060469 | MS.gene20427 | 0.839609 | 1.43E-57 | -1.69E-46 |
| MS.gene060482 | MS.gene20427 | 0.836124 | 1.12E-56 | -1.69E-46 |
| MS.gene060485 | MS.gene20427 | 0.81494 | 1.19E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene20427 | 0.818485 | 1.91E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene20427 | 0.816431 | 5.55E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene20427 | 0.872229 | 3.73E-67 | -1.69E-46 |
| MS.gene060818 | MS.gene20427 | 0.852066 | 5.89E-61 | -1.69E-46 |
| MS.gene060835 | MS.gene20427 | 0.847149 | 1.39E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene20427 | 0.86947 | 3.02E-66 | -1.69E-46 |
| MS.gene06092 | MS.gene20427 | 0.844136 | 9.11E-59 | -1.69E-46 |
| MS.gene060982 | MS.gene20427 | 0.814153 | 1.78E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene20427 | 0.847072 | 1.46E-59 | -1.69E-46 |
| MS.gene061134 | MS.gene20427 | 0.816744 | 4.72E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene20427 | 0.82693 | 2.07E-54 | -1.69E-46 |
| MS.gene061200 | MS.gene20427 | 0.850319 | 1.83E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20427.t1 | MTR_6g012520 | 100.000 | 244 | 0 | 0 | 1 | 244 | 1 | 244 | 0.0 | 500 |
| MS.gene20427.t1 | MTR_7g011060 | 86.475 | 244 | 31 | 1 | 1 | 244 | 1 | 242 | 4.85e-156 | 433 |
| MS.gene20427.t1 | MTR_5g041700 | 75.200 | 250 | 51 | 3 | 1 | 242 | 1 | 247 | 4.23e-135 | 380 |
| MS.gene20427.t1 | MTR_4g081950 | 73.705 | 251 | 58 | 1 | 1 | 243 | 34 | 284 | 2.74e-133 | 377 |
| MS.gene20427.t1 | MTR_3g094060 | 79.464 | 224 | 38 | 1 | 27 | 242 | 30 | 253 | 9.34e-131 | 369 |
| MS.gene20427.t1 | MTR_3g435430 | 76.856 | 229 | 45 | 1 | 22 | 242 | 19 | 247 | 7.30e-130 | 367 |
| MS.gene20427.t1 | MTR_3g094040 | 79.018 | 224 | 39 | 1 | 27 | 242 | 30 | 253 | 1.67e-129 | 366 |
| MS.gene20427.t1 | MTR_5g075320 | 69.512 | 246 | 64 | 3 | 8 | 242 | 6 | 251 | 4.87e-126 | 357 |
| MS.gene20427.t1 | MTR_3g466790 | 71.020 | 245 | 60 | 2 | 6 | 242 | 13 | 254 | 1.35e-124 | 354 |
| MS.gene20427.t1 | MTR_3g466760 | 70.204 | 245 | 62 | 2 | 6 | 242 | 19 | 260 | 3.10e-123 | 350 |
| MS.gene20427.t1 | MTR_7g061720 | 69.333 | 225 | 59 | 2 | 28 | 242 | 32 | 256 | 1.88e-113 | 326 |
| MS.gene20427.t1 | MTR_5g079950 | 64.777 | 247 | 76 | 3 | 6 | 242 | 12 | 257 | 3.66e-113 | 325 |
| MS.gene20427.t1 | MTR_4g063975 | 62.698 | 252 | 84 | 2 | 1 | 242 | 5 | 256 | 4.44e-110 | 317 |
| MS.gene20427.t1 | MTR_2g097030 | 67.556 | 225 | 63 | 2 | 28 | 242 | 34 | 258 | 3.44e-109 | 315 |
| MS.gene20427.t1 | MTR_1g085460 | 64.889 | 225 | 67 | 4 | 28 | 240 | 30 | 254 | 1.63e-105 | 306 |
| MS.gene20427.t1 | MTR_1g026020 | 58.167 | 251 | 91 | 4 | 1 | 240 | 5 | 252 | 3.25e-104 | 302 |
| MS.gene20427.t1 | MTR_7g111010 | 59.036 | 249 | 89 | 5 | 1 | 237 | 1 | 248 | 1.60e-101 | 295 |
| MS.gene20427.t1 | MTR_7g110990 | 64.414 | 222 | 67 | 4 | 28 | 237 | 12 | 233 | 4.69e-101 | 294 |
| MS.gene20427.t1 | MTR_7g013150 | 54.032 | 248 | 106 | 2 | 1 | 240 | 3 | 250 | 1.31e-91 | 270 |
| MS.gene20427.t1 | MTR_7g013120 | 53.200 | 250 | 107 | 4 | 1 | 241 | 3 | 251 | 5.41e-90 | 266 |
| MS.gene20427.t1 | MTR_7g013140 | 58.824 | 221 | 83 | 2 | 28 | 240 | 28 | 248 | 1.92e-88 | 262 |
| MS.gene20427.t1 | MTR_8g058990 | 58.182 | 220 | 84 | 2 | 28 | 239 | 30 | 249 | 1.40e-87 | 260 |
| MS.gene20427.t1 | MTR_4g124340 | 54.464 | 224 | 89 | 4 | 28 | 240 | 61 | 282 | 2.27e-86 | 258 |
| MS.gene20427.t1 | MTR_8g464350 | 53.719 | 242 | 101 | 3 | 7 | 237 | 7 | 248 | 4.61e-86 | 256 |
| MS.gene20427.t1 | MTR_5g076950 | 53.097 | 226 | 97 | 2 | 28 | 244 | 41 | 266 | 1.23e-84 | 253 |
| MS.gene20427.t1 | MTR_0040s0140 | 47.451 | 255 | 120 | 4 | 1 | 242 | 3 | 256 | 2.97e-83 | 249 |
| MS.gene20427.t1 | MTR_5g011210 | 54.464 | 224 | 90 | 4 | 28 | 240 | 37 | 259 | 2.42e-80 | 242 |
| MS.gene20427.t1 | MTR_4g102450 | 50.813 | 246 | 108 | 4 | 6 | 238 | 11 | 256 | 2.31e-79 | 239 |
| MS.gene20427.t1 | MTR_2g090255 | 48.178 | 247 | 116 | 4 | 6 | 242 | 8 | 252 | 3.43e-78 | 236 |
| MS.gene20427.t1 | MTR_3g064510 | 50.000 | 232 | 99 | 5 | 28 | 242 | 53 | 284 | 5.44e-74 | 226 |
| MS.gene20427.t1 | MTR_6g012500 | 85.246 | 122 | 12 | 1 | 129 | 244 | 161 | 282 | 8.80e-69 | 213 |
| MS.gene20427.t1 | MTR_0008s0120 | 41.975 | 243 | 89 | 3 | 1 | 239 | 1 | 195 | 5.81e-57 | 180 |
| MS.gene20427.t1 | MTR_2g090270 | 33.778 | 225 | 133 | 7 | 28 | 240 | 35 | 255 | 6.14e-29 | 110 |
| MS.gene20427.t1 | MTR_2g090265 | 32.540 | 252 | 154 | 8 | 1 | 240 | 6 | 253 | 1.65e-27 | 106 |
| MS.gene20427.t1 | MTR_0122s0020 | 32.751 | 229 | 138 | 8 | 28 | 244 | 41 | 265 | 1.26e-26 | 104 |
| MS.gene20427.t1 | MTR_4g028640 | 33.624 | 229 | 127 | 9 | 25 | 237 | 39 | 258 | 1.13e-25 | 101 |
| MS.gene20427.t1 | MTR_0118s0070 | 31.674 | 221 | 131 | 9 | 33 | 237 | 53 | 269 | 2.37e-23 | 95.5 |
| MS.gene20427.t1 | MTR_0809s0010 | 31.858 | 226 | 130 | 10 | 28 | 237 | 47 | 264 | 2.67e-23 | 95.5 |
| MS.gene20427.t1 | MTR_0122s0020 | 36.310 | 168 | 92 | 8 | 28 | 184 | 41 | 204 | 1.23e-19 | 84.3 |
| MS.gene20427.t1 | MTR_4g098930 | 30.837 | 227 | 131 | 11 | 28 | 237 | 29 | 246 | 2.51e-17 | 79.0 |
| MS.gene20427.t1 | MTR_5g013440 | 28.251 | 223 | 147 | 9 | 28 | 240 | 29 | 248 | 1.19e-16 | 77.0 |
| MS.gene20427.t1 | MTR_1g085365 | 58.929 | 56 | 23 | 0 | 187 | 242 | 4 | 59 | 1.88e-16 | 71.6 |
| MS.gene20427.t1 | MTR_4g099370 | 28.507 | 221 | 143 | 9 | 28 | 237 | 28 | 244 | 6.61e-16 | 75.1 |
| MS.gene20427.t1 | MTR_4g075790 | 29.817 | 218 | 122 | 9 | 39 | 237 | 32 | 237 | 9.51e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20427.t1 | AT2G03090 | 76.190 | 252 | 48 | 3 | 1 | 242 | 3 | 252 | 2.23e-138 | 389 |
| MS.gene20427.t1 | AT3G29030 | 83.028 | 218 | 36 | 1 | 28 | 244 | 38 | 255 | 9.42e-137 | 385 |
| MS.gene20427.t1 | AT1G69530 | 76.000 | 250 | 51 | 2 | 1 | 242 | 1 | 249 | 5.55e-136 | 382 |
| MS.gene20427.t1 | AT1G69530 | 76.000 | 250 | 51 | 2 | 1 | 242 | 1 | 249 | 5.55e-136 | 382 |
| MS.gene20427.t1 | AT1G26770 | 76.800 | 250 | 48 | 2 | 1 | 242 | 1 | 248 | 3.37e-135 | 380 |
| MS.gene20427.t1 | AT1G26770 | 76.800 | 250 | 48 | 2 | 1 | 242 | 11 | 258 | 3.90e-135 | 381 |
| MS.gene20427.t1 | AT1G69530 | 76.423 | 246 | 49 | 2 | 1 | 238 | 1 | 245 | 1.10e-134 | 380 |
| MS.gene20427.t1 | AT5G56320 | 68.526 | 251 | 70 | 2 | 1 | 242 | 1 | 251 | 1.48e-128 | 364 |
| MS.gene20427.t1 | AT5G56320 | 68.526 | 251 | 70 | 2 | 1 | 242 | 1 | 251 | 1.48e-128 | 364 |
| MS.gene20427.t1 | AT5G56320 | 68.526 | 251 | 70 | 2 | 1 | 242 | 1 | 251 | 3.55e-128 | 365 |
| MS.gene20427.t1 | AT2G40610 | 68.800 | 250 | 68 | 3 | 2 | 242 | 5 | 253 | 4.05e-124 | 353 |
| MS.gene20427.t1 | AT5G02260 | 70.667 | 225 | 56 | 2 | 28 | 242 | 32 | 256 | 5.28e-116 | 332 |
| MS.gene20427.t1 | AT2G39700 | 66.667 | 243 | 70 | 3 | 11 | 242 | 13 | 255 | 5.38e-116 | 332 |
| MS.gene20427.t1 | AT1G69530 | 67.600 | 250 | 42 | 3 | 1 | 242 | 1 | 219 | 2.27e-115 | 329 |
| MS.gene20427.t1 | AT1G69530 | 71.304 | 230 | 55 | 3 | 1 | 222 | 1 | 227 | 7.29e-115 | 329 |
| MS.gene20427.t1 | AT5G05290 | 63.200 | 250 | 82 | 3 | 2 | 242 | 7 | 255 | 9.44e-115 | 329 |
| MS.gene20427.t1 | AT2G37640 | 70.222 | 225 | 57 | 2 | 28 | 242 | 36 | 260 | 1.20e-113 | 327 |
| MS.gene20427.t1 | AT3G55500 | 62.109 | 256 | 83 | 4 | 1 | 242 | 3 | 258 | 8.41e-112 | 322 |
| MS.gene20427.t1 | AT2G28950 | 64.453 | 256 | 76 | 4 | 1 | 242 | 1 | 255 | 1.34e-111 | 321 |
| MS.gene20427.t1 | AT4G01630 | 58.635 | 249 | 91 | 4 | 1 | 237 | 1 | 249 | 7.12e-105 | 304 |
| MS.gene20427.t1 | AT1G20190 | 64.159 | 226 | 70 | 3 | 24 | 238 | 22 | 247 | 7.04e-102 | 296 |
| MS.gene20427.t1 | AT2G37640 | 67.788 | 208 | 57 | 2 | 45 | 242 | 28 | 235 | 5.52e-101 | 293 |
| MS.gene20427.t1 | AT5G39280 | 54.911 | 224 | 95 | 1 | 23 | 240 | 49 | 272 | 8.60e-89 | 264 |
| MS.gene20427.t1 | AT5G39300 | 54.911 | 224 | 95 | 1 | 23 | 240 | 50 | 273 | 2.56e-88 | 263 |
| MS.gene20427.t1 | AT5G39270 | 56.164 | 219 | 90 | 1 | 28 | 240 | 58 | 276 | 6.26e-88 | 262 |
| MS.gene20427.t1 | AT5G39290 | 55.251 | 219 | 92 | 1 | 28 | 240 | 58 | 276 | 5.19e-87 | 259 |
| MS.gene20427.t1 | AT1G12560 | 52.893 | 242 | 104 | 3 | 6 | 237 | 14 | 255 | 3.11e-84 | 252 |
| MS.gene20427.t1 | AT3G15370 | 51.383 | 253 | 112 | 7 | 1 | 243 | 1 | 252 | 2.20e-83 | 249 |
| MS.gene20427.t1 | AT5G39310 | 55.204 | 221 | 92 | 2 | 27 | 240 | 89 | 309 | 2.52e-83 | 251 |
| MS.gene20427.t1 | AT5G39260 | 51.220 | 246 | 109 | 3 | 6 | 240 | 14 | 259 | 1.56e-81 | 245 |
| MS.gene20427.t1 | AT1G62980 | 55.357 | 224 | 88 | 4 | 28 | 240 | 31 | 253 | 3.77e-81 | 244 |
| MS.gene20427.t1 | AT1G20190 | 60.963 | 187 | 62 | 3 | 63 | 238 | 2 | 188 | 1.55e-79 | 238 |
| MS.gene20427.t1 | AT3G03220 | 50.000 | 224 | 103 | 2 | 28 | 242 | 40 | 263 | 4.67e-78 | 236 |
| MS.gene20427.t1 | AT3G15370 | 45.936 | 283 | 112 | 8 | 1 | 243 | 1 | 282 | 1.15e-76 | 233 |
| MS.gene20427.t1 | AT4G38210 | 47.431 | 253 | 120 | 4 | 2 | 242 | 3 | 254 | 4.45e-75 | 228 |
| MS.gene20427.t1 | AT4G28250 | 34.413 | 247 | 145 | 9 | 7 | 240 | 15 | 257 | 7.14e-31 | 115 |
| MS.gene20427.t1 | AT2G20750 | 33.186 | 226 | 137 | 7 | 28 | 240 | 40 | 264 | 1.30e-30 | 114 |
| MS.gene20427.t1 | AT4G28250 | 33.333 | 246 | 143 | 9 | 7 | 240 | 15 | 251 | 1.82e-27 | 106 |
| MS.gene20427.t1 | AT1G65680 | 32.000 | 225 | 134 | 8 | 28 | 237 | 47 | 267 | 4.86e-25 | 100 |
| MS.gene20427.t1 | AT2G20750 | 35.152 | 165 | 95 | 5 | 28 | 181 | 40 | 203 | 3.37e-23 | 94.0 |
| MS.gene20427.t1 | AT1G65681 | 32.536 | 209 | 124 | 9 | 42 | 237 | 12 | 216 | 4.84e-22 | 91.3 |
| MS.gene20427.t1 | AT2G45110 | 32.301 | 226 | 126 | 9 | 31 | 237 | 36 | 253 | 9.42e-22 | 91.3 |
| MS.gene20427.t1 | AT4G28250 | 34.211 | 190 | 106 | 7 | 7 | 186 | 15 | 195 | 1.24e-20 | 87.0 |
| MS.gene20427.t1 | AT4G28250 | 36.527 | 167 | 87 | 7 | 25 | 181 | 33 | 190 | 2.46e-20 | 86.3 |
| MS.gene20427.t1 | AT3G60570 | 28.049 | 246 | 158 | 7 | 6 | 237 | 11 | 251 | 5.03e-19 | 84.0 |
| MS.gene20427.t1 | AT4G17030 | 30.000 | 230 | 140 | 8 | 28 | 243 | 27 | 249 | 6.38e-19 | 83.2 |
| MS.gene20427.t1 | AT3G45970 | 27.830 | 212 | 127 | 9 | 46 | 239 | 14 | 217 | 1.54e-14 | 71.2 |
| MS.gene20427.t1 | AT3G60570 | 26.829 | 205 | 132 | 6 | 46 | 237 | 4 | 203 | 5.52e-14 | 69.3 |
| MS.gene20427.t1 | AT3G45970 | 27.053 | 207 | 125 | 9 | 51 | 239 | 46 | 244 | 7.25e-12 | 63.9 |
| MS.gene20427.t1 | AT4G38400 | 25.728 | 206 | 128 | 9 | 51 | 239 | 47 | 244 | 3.56e-11 | 62.0 |
| MS.gene20427.t1 | AT3G45960 | 26.471 | 204 | 125 | 9 | 51 | 237 | 46 | 241 | 8.37e-11 | 60.8 |
Find 77 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATGGCTATGGTAGAAAT+TGG | 0.198703 | 6.3:-6964015 | MS.gene20427:CDS |
| TCAGGTGGGGCTTGTGGATA+TGG | 0.237454 | 6.3:-6963435 | MS.gene20427:intron |
| GAGCCATGGAGACACCATTT+TGG | 0.252914 | 6.3:+6963303 | None:intergenic |
| AATGCACATGCAACCTTCTA+TGG | 0.293252 | 6.3:-6963983 | MS.gene20427:CDS |
| CATCTAGGCTTTCTTGTTCT+AGG | 0.294548 | 6.3:-6964064 | MS.gene20427:CDS |
| TCTAGTCCTTGAACCTTTGA+TGG | 0.309672 | 6.3:+6962650 | None:intergenic |
| GTAGAAGAAGAGGTGGAATA+AGG | 0.318290 | 6.3:-6962752 | MS.gene20427:CDS |
| GCCCCACCCAGTTGGTCCTT+TGG | 0.320692 | 6.3:-6962507 | MS.gene20427:CDS |
| GGCAAGCCATGTCAAGGAAT+TGG | 0.336529 | 6.3:-6962626 | MS.gene20427:CDS |
| CAAGGAATTGGGGACAAAAT+TGG | 0.338609 | 6.3:-6962614 | MS.gene20427:CDS |
| GCAAGCCATGTCAAGGAATT+GGG | 0.340806 | 6.3:-6962625 | MS.gene20427:CDS |
| TTGTTCCTGTTGTTTATAGA+AGG | 0.359748 | 6.3:-6963164 | MS.gene20427:intron |
| CCATGGCTATGGTAGAAATT+GGG | 0.365156 | 6.3:-6964014 | MS.gene20427:CDS |
| AGCATCACTGCCACCATAGA+AGG | 0.378869 | 6.3:+6963970 | None:intergenic |
| GAGAGATCAAAATGGTGATT+AGG | 0.389572 | 6.3:+6963228 | None:intergenic |
| TATGGTGGCAGTGATGCTTC+TGG | 0.392725 | 6.3:-6963965 | MS.gene20427:CDS |
| CAGAGCAACTCTTATTTGAA+TGG | 0.396658 | 6.3:-6962591 | MS.gene20427:CDS |
| GTGACTAATGTTGGAGGTGC+TGG | 0.409148 | 6.3:-6962690 | MS.gene20427:CDS |
| GGTTTGTCCAAAGGACCAAC+TGG | 0.413288 | 6.3:+6962500 | None:intergenic |
| AACTTGTATAGTCAAGGTTA+TGG | 0.413609 | 6.3:-6963411 | MS.gene20427:CDS |
| TGAGCAATGTGTTGGAAAAC+AGG | 0.417463 | 6.3:+6963201 | None:intergenic |
| TTAGTCCTTGTGACTAATGT+TGG | 0.430036 | 6.3:-6962699 | MS.gene20427:CDS |
| TTTGTAGTCACCACGGGTAA+TGG | 0.434090 | 6.3:-6962555 | MS.gene20427:CDS |
| AATTACCTTCTATAAACAAC+AGG | 0.442368 | 6.3:+6963159 | None:intergenic |
| TCAAAGGTTCAAGGACTAGA+TGG | 0.459280 | 6.3:-6962647 | MS.gene20427:CDS |
| ACTTGTATAGTCAAGGTTAT+GGG | 0.466026 | 6.3:-6963410 | MS.gene20427:CDS |
| ATCTCATATGTCCATGGCTA+TGG | 0.469731 | 6.3:-6964025 | MS.gene20427:CDS |
| GGAATAAGGTTCACAATCAA+TGG | 0.470548 | 6.3:-6962738 | MS.gene20427:CDS |
| CTTTATATTGAGCAATGTGT+TGG | 0.478496 | 6.3:+6963193 | None:intergenic |
| CTGTAGCCATCAAAGGTTCA+AGG | 0.485843 | 6.3:-6962656 | MS.gene20427:CDS |
| TCCAAAGGACCAACTGGGTG+GGG | 0.487484 | 6.3:+6962506 | None:intergenic |
| TCCTTGATCTCATATGTCCA+TGG | 0.488957 | 6.3:-6964031 | MS.gene20427:CDS |
| TAAATTTCAGGTGGGGCTTG+TGG | 0.490656 | 6.3:-6963441 | MS.gene20427:intron |
| GTCCTTGTGACTAATGTTGG+AGG | 0.495647 | 6.3:-6962696 | MS.gene20427:CDS |
| AATGTGCTAGTGACCCAAAA+TGG | 0.497071 | 6.3:-6963317 | MS.gene20427:CDS |
| CACATTGCTCAATATAAAGC+TGG | 0.505971 | 6.3:-6963189 | MS.gene20427:CDS |
| AGGGTAAGGTGTAGAAGAAG+AGG | 0.509744 | 6.3:-6962762 | MS.gene20427:CDS |
| AGTGATGCTTCTGGCACAAT+GGG | 0.518333 | 6.3:-6963956 | MS.gene20427:intron |
| GCCACTAATTTCTGTCCACC+TGG | 0.524649 | 6.3:-6963267 | MS.gene20427:CDS |
| GCCATGGACATATGAGATCA+AGG | 0.531008 | 6.3:+6964030 | None:intergenic |
| TTAATGTTGCCCCACCCAGT+TGG | 0.531923 | 6.3:-6962515 | MS.gene20427:CDS |
| CTTTCATTTGTAGTCACCAC+GGG | 0.534498 | 6.3:-6962561 | MS.gene20427:CDS |
| AGATCAAAATGGTGATTAGG+AGG | 0.535090 | 6.3:+6963231 | None:intergenic |
| TTCAACAATGGTTTGAGTTG+TGG | 0.535378 | 6.3:-6963357 | MS.gene20427:CDS |
| CAGGTTGAGAGAGATCAAAA+TGG | 0.536275 | 6.3:+6963220 | None:intergenic |
| TTTAAAGGGTTGGTTAGTAG+AGG | 0.543847 | 6.3:+6962460 | None:intergenic |
| ATTTCTGTCCACCTGGTGGT+TGG | 0.547131 | 6.3:-6963260 | MS.gene20427:CDS |
| TCCTTTGGACAAACCTACAC+TGG | 0.547722 | 6.3:-6962492 | MS.gene20427:CDS |
| GAGGAACTGCCTTCCAGTGT+AGG | 0.551003 | 6.3:+6962479 | None:intergenic |
| TTGTCCCCAATTCCTTGACA+TGG | 0.556187 | 6.3:+6962620 | None:intergenic |
| CCCAATTTCTACCATAGCCA+TGG | 0.556965 | 6.3:+6964014 | None:intergenic |
| GACCCAAAATGGTGTCTCCA+TGG | 0.557622 | 6.3:-6963306 | MS.gene20427:CDS |
| GTCCAAAGGACCAACTGGGT+GGG | 0.563335 | 6.3:+6962505 | None:intergenic |
| GTAAGGTGTAGAAGAAGAGG+TGG | 0.567385 | 6.3:-6962759 | MS.gene20427:CDS |
| GCTATGGTAGAAATTGGGGT+TGG | 0.571222 | 6.3:-6964009 | MS.gene20427:CDS |
| CAGTGATGCTTCTGGCACAA+TGG | 0.576572 | 6.3:-6963957 | MS.gene20427:CDS |
| TCCAGTGTAGGTTTGTCCAA+AGG | 0.584012 | 6.3:+6962491 | None:intergenic |
| TATGGAAACTTGTATAGTCA+AGG | 0.585100 | 6.3:-6963417 | MS.gene20427:CDS |
| GTGCATTCTGTAGCCATCAA+AGG | 0.587053 | 6.3:-6962663 | MS.gene20427:CDS |
| ACCAGGTGGACAGAAATTAG+TGG | 0.590692 | 6.3:+6963266 | None:intergenic |
| AGTACTGCATTATTCAACAA+TGG | 0.595819 | 6.3:-6963369 | MS.gene20427:CDS |
| CAGTAACAACAATGGAGCCA+TGG | 0.606178 | 6.3:+6963289 | None:intergenic |
| GGAGGGTCACACCAACCACC+AGG | 0.606947 | 6.3:+6963249 | None:intergenic |
| CACCTCCAACATTAGTCACA+AGG | 0.609149 | 6.3:+6962694 | None:intergenic |
| CTAGATGGCAAGCCATGTCA+AGG | 0.612177 | 6.3:-6962632 | MS.gene20427:CDS |
| TGTCCAAAGGACCAACTGGG+TGG | 0.615300 | 6.3:+6962504 | None:intergenic |
| ACTAATTTCTGTCCACCTGG+TGG | 0.617803 | 6.3:-6963264 | MS.gene20427:CDS |
| CAAGCCATGTCAAGGAATTG+GGG | 0.622367 | 6.3:-6962624 | MS.gene20427:CDS |
| CATGGCTATGGTAGAAATTG+GGG | 0.623894 | 6.3:-6964013 | MS.gene20427:CDS |
| TTGGACAAACCTACACTGGA+AGG | 0.627049 | 6.3:-6962488 | MS.gene20427:CDS |
| TCTTTCATTTGTAGTCACCA+CGG | 0.631684 | 6.3:-6962562 | MS.gene20427:CDS |
| ATTAGTGGCAGTAACAACAA+TGG | 0.635904 | 6.3:+6963281 | None:intergenic |
| GCACATGCAACCTTCTATGG+TGG | 0.645972 | 6.3:-6963980 | MS.gene20427:CDS |
| GATCAAAATGGTGATTAGGA+GGG | 0.666299 | 6.3:+6963232 | None:intergenic |
| GTTTGTCCAAAGGACCAACT+GGG | 0.667033 | 6.3:+6962501 | None:intergenic |
| GGGTCACACCAACCACCAGG+TGG | 0.687412 | 6.3:+6963252 | None:intergenic |
| AATACTATGACCATTACCCG+TGG | 0.719067 | 6.3:+6962545 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATCAAATTTTAAAACTA+TGG | + | chr6.3:6962649-6962668 | None:intergenic | 10.0% |
| !!! | TGATTTTCTCAAAATATTAG+CGG | + | chr6.3:6963572-6963591 | None:intergenic | 20.0% |
| !!! | TTAATCTTTTACTACTTGTT+TGG | - | chr6.3:6963714-6963733 | MS.gene20427:intron | 20.0% |
| ! | AATTACCTTCTATAAACAAC+AGG | + | chr6.3:6963387-6963406 | None:intergenic | 25.0% |
| ! | ATCCATTTCACATATTGTTA+AGG | + | chr6.3:6963437-6963456 | None:intergenic | 25.0% |
| ! | ATCCTTAACAATATGTGAAA+TGG | - | chr6.3:6963432-6963451 | MS.gene20427:CDS | 25.0% |
| ! | CAATTACGAGTACAATATAA+AGG | + | chr6.3:6962751-6962770 | None:intergenic | 25.0% |
| ! | TGTACCTTATGTTAAATTTC+AGG | - | chr6.3:6963090-6963109 | MS.gene20427:intron | 25.0% |
| !! | GTACAATATAAAGGATTTTG+AGG | + | chr6.3:6962742-6962761 | None:intergenic | 25.0% |
| !! | TGTTGCAAACTTTTACATTA+TGG | - | chr6.3:6962675-6962694 | MS.gene20427:CDS | 25.0% |
| AACTTGTATAGTCAAGGTTA+TGG | - | chr6.3:6963132-6963151 | MS.gene20427:intron | 30.0% | |
| ACAAAACCCTAATCGAATTT+CGG | - | chr6.3:6962953-6962972 | MS.gene20427:intron | 30.0% | |
| ACCTTATGTTAAATTTCAGG+TGG | - | chr6.3:6963093-6963112 | MS.gene20427:intron | 30.0% | |
| ACTTACATATCTATGAAGCA+AGG | + | chr6.3:6963675-6963694 | None:intergenic | 30.0% | |
| ACTTGTATAGTCAAGGTTAT+GGG | - | chr6.3:6963133-6963152 | MS.gene20427:intron | 30.0% | |
| AGAAAACAAAGTTAGCATCA+TGG | + | chr6.3:6963740-6963759 | None:intergenic | 30.0% | |
| AGTACTGCATTATTCAACAA+TGG | - | chr6.3:6963174-6963193 | MS.gene20427:CDS | 30.0% | |
| ATTGTTTCCGAAATTCGATT+AGG | + | chr6.3:6962963-6962982 | None:intergenic | 30.0% | |
| CTATGTAACTATATGAAGCA+CGG | - | chr6.3:6963512-6963531 | MS.gene20427:intron | 30.0% | |
| CTTTATATTGAGCAATGTGT+TGG | + | chr6.3:6963353-6963372 | None:intergenic | 30.0% | |
| GTAATTATATGTGTCAGTGT+CGG | - | chr6.3:6963603-6963622 | MS.gene20427:intron | 30.0% | |
| TATGGAAACTTGTATAGTCA+AGG | - | chr6.3:6963126-6963145 | MS.gene20427:intron | 30.0% | |
| TCACATATTGTTAAGGATGA+AGG | + | chr6.3:6963430-6963449 | None:intergenic | 30.0% | |
| TTGTTTCCGAAATTCGATTA+GGG | + | chr6.3:6962962-6962981 | None:intergenic | 30.0% | |
| ! | CCTTATGTTAAATTTCAGGT+GGG | - | chr6.3:6963094-6963113 | MS.gene20427:intron | 30.0% |
| ! | CTTATGTTAAATTTCAGGTG+GGG | - | chr6.3:6963095-6963114 | MS.gene20427:intron | 30.0% |
| ! | GCAAACACATTTGTTAGTTA+TGG | + | chr6.3:6963062-6963081 | None:intergenic | 30.0% |
| ! | TATGTTCTAGCTATACTTTG+TGG | - | chr6.3:6962838-6962857 | MS.gene20427:intron | 30.0% |
| ! | TTGTTCCTGTTGTTTATAGA+AGG | - | chr6.3:6963379-6963398 | MS.gene20427:CDS | 30.0% |
| !! | ATGCATGGTTTTTGATTGAA+GGG | - | chr6.3:6963762-6963781 | MS.gene20427:intron | 30.0% |
| !!! | AACTTTGTTTTCTTCATGCA+TGG | - | chr6.3:6963747-6963766 | MS.gene20427:intron | 30.0% |
| AAAATTCTTAGCCATGCTCA+TGG | + | chr6.3:6962797-6962816 | None:intergenic | 35.0% | |
| AAACAATCGAGCCATTGTAA+AGG | - | chr6.3:6962976-6962995 | MS.gene20427:intron | 35.0% | |
| AACTATATGAAGCACGGATA+CGG | - | chr6.3:6963518-6963537 | MS.gene20427:intron | 35.0% | |
| AGATCAAAATGGTGATTAGG+AGG | + | chr6.3:6963315-6963334 | None:intergenic | 35.0% | |
| ATTAGTGGCAGTAACAACAA+TGG | + | chr6.3:6963265-6963284 | None:intergenic | 35.0% | |
| CACATTGCTCAATATAAAGC+TGG | - | chr6.3:6963354-6963373 | MS.gene20427:CDS | 35.0% | |
| CCCACCTGAAATTTAACATA+AGG | + | chr6.3:6963097-6963116 | None:intergenic | 35.0% | |
| GAGAGATCAAAATGGTGATT+AGG | + | chr6.3:6963318-6963337 | None:intergenic | 35.0% | |
| GATCAAAATGGTGATTAGGA+GGG | + | chr6.3:6963314-6963333 | None:intergenic | 35.0% | |
| GGAATAAGGTTCACAATCAA+TGG | - | chr6.3:6963805-6963824 | MS.gene20427:intron | 35.0% | |
| GTTGAAGTTCGAGCAATTTA+AGG | + | chr6.3:6962935-6962954 | None:intergenic | 35.0% | |
| TCTCAAAATATTAGCGGTGT+TGG | + | chr6.3:6963566-6963585 | None:intergenic | 35.0% | |
| TCTTTCATTTGTAGTCACCA+CGG | - | chr6.3:6963981-6964000 | MS.gene20427:CDS | 35.0% | |
| TGGTCTGGTTGTTAAAACAA+TGG | + | chr6.3:6962872-6962891 | None:intergenic | 35.0% | |
| TTAGTCCTTGTGACTAATGT+TGG | - | chr6.3:6963844-6963863 | MS.gene20427:intron | 35.0% | |
| TTCAACTTGGTTAAACTGTC+TGG | - | chr6.3:6963010-6963029 | MS.gene20427:intron | 35.0% | |
| ! | AGCATGGCTAAGAATTTTGT+TGG | - | chr6.3:6962799-6962818 | MS.gene20427:intron | 35.0% |
| ! | CAGAGCAACTCTTATTTGAA+TGG | - | chr6.3:6963952-6963971 | MS.gene20427:intron | 35.0% |
| !! | CATGCATGGTTTTTGATTGA+AGG | - | chr6.3:6963761-6963780 | MS.gene20427:intron | 35.0% |
| !! | TGGTTTTTGATTGAAGGGTA+AGG | - | chr6.3:6963767-6963786 | MS.gene20427:intron | 35.0% |
| !! | TTCAACAATGGTTTGAGTTG+TGG | - | chr6.3:6963186-6963205 | MS.gene20427:CDS | 35.0% |
| AATACTATGACCATTACCCG+TGG | + | chr6.3:6964001-6964020 | None:intergenic | 40.0% | |
| AATGCACATGCAACCTTCTA+TGG | - | chr6.3:6962560-6962579 | MS.gene20427:CDS | 40.0% | |
| AATGTGCTAGTGACCCAAAA+TGG | - | chr6.3:6963226-6963245 | MS.gene20427:CDS | 40.0% | |
| ATCTCATATGTCCATGGCTA+TGG | - | chr6.3:6962518-6962537 | MS.gene20427:CDS | 40.0% | |
| CAAGGAATTGGGGACAAAAT+TGG | - | chr6.3:6963929-6963948 | MS.gene20427:intron | 40.0% | |
| CATCTAGGCTTTCTTGTTCT+AGG | - | chr6.3:6962479-6962498 | MS.gene20427:CDS | 40.0% | |
| CATGGCTATGGTAGAAATTG+GGG | - | chr6.3:6962530-6962549 | MS.gene20427:CDS | 40.0% | |
| CCATGAATAAGAAGTCTCAC+CGG | + | chr6.3:6962904-6962923 | None:intergenic | 40.0% | |
| CCATGGCTATGGTAGAAATT+GGG | - | chr6.3:6962529-6962548 | MS.gene20427:CDS | 40.0% | |
| CTTTCATTTGTAGTCACCAC+GGG | - | chr6.3:6963982-6964001 | MS.gene20427:CDS | 40.0% | |
| GCAATATGAAACCATGAGCA+TGG | - | chr6.3:6962783-6962802 | MS.gene20427:intron | 40.0% | |
| GTAGAAGAAGAGGTGGAATA+AGG | - | chr6.3:6963791-6963810 | MS.gene20427:intron | 40.0% | |
| TCAAAGGTTCAAGGACTAGA+TGG | - | chr6.3:6963896-6963915 | MS.gene20427:intron | 40.0% | |
| TCCATGGCTATGGTAGAAAT+TGG | - | chr6.3:6962528-6962547 | MS.gene20427:CDS | 40.0% | |
| TCCTTGATCTCATATGTCCA+TGG | - | chr6.3:6962512-6962531 | MS.gene20427:CDS | 40.0% | |
| TCTAGTCCTTGAACCTTTGA+TGG | + | chr6.3:6963896-6963915 | None:intergenic | 40.0% | |
| TGAGCAATGTGTTGGAAAAC+AGG | + | chr6.3:6963345-6963364 | None:intergenic | 40.0% | |
| ! | CAGGTTGAGAGAGATCAAAA+TGG | + | chr6.3:6963326-6963345 | None:intergenic | 40.0% |
| ! | CCATTGTAAAGGCTAGTTCA+AGG | - | chr6.3:6962987-6963006 | MS.gene20427:intron | 40.0% |
| !! | CCTTGAACTAGCCTTTACAA+TGG | + | chr6.3:6962990-6963009 | None:intergenic | 40.0% |
| ACCAGGTGGACAGAAATTAG+TGG | + | chr6.3:6963280-6963299 | None:intergenic | 45.0% | |
| ACTAATTTCTGTCCACCTGG+TGG | - | chr6.3:6963279-6963298 | MS.gene20427:CDS | 45.0% | |
| AGGGTAAGGTGTAGAAGAAG+AGG | - | chr6.3:6963781-6963800 | MS.gene20427:intron | 45.0% | |
| AGTGATGCTTCTGGCACAAT+GGG | - | chr6.3:6962587-6962606 | MS.gene20427:CDS | 45.0% | |
| ATTGCGTTTGCATGTCGTTG+TGG | - | chr6.3:6962713-6962732 | MS.gene20427:CDS | 45.0% | |
| CAAGCCATGTCAAGGAATTG+GGG | - | chr6.3:6963919-6963938 | MS.gene20427:intron | 45.0% | |
| CACCTCCAACATTAGTCACA+AGG | + | chr6.3:6963852-6963871 | None:intergenic | 45.0% | |
| CAGTAACAACAATGGAGCCA+TGG | + | chr6.3:6963257-6963276 | None:intergenic | 45.0% | |
| CCCAATTTCTACCATAGCCA+TGG | + | chr6.3:6962532-6962551 | None:intergenic | 45.0% | |
| CCGGTGAGACTTCTTATTCA+TGG | - | chr6.3:6962901-6962920 | MS.gene20427:intron | 45.0% | |
| CTGTAGCCATCAAAGGTTCA+AGG | - | chr6.3:6963887-6963906 | MS.gene20427:intron | 45.0% | |
| GCAAGCCATGTCAAGGAATT+GGG | - | chr6.3:6963918-6963937 | MS.gene20427:intron | 45.0% | |
| GCCATGGACATATGAGATCA+AGG | + | chr6.3:6962516-6962535 | None:intergenic | 45.0% | |
| GCTATGGTAGAAATTGGGGT+TGG | - | chr6.3:6962534-6962553 | MS.gene20427:CDS | 45.0% | |
| GTAAGGTGTAGAAGAAGAGG+TGG | - | chr6.3:6963784-6963803 | MS.gene20427:intron | 45.0% | |
| GTCCTTGTGACTAATGTTGG+AGG | - | chr6.3:6963847-6963866 | MS.gene20427:intron | 45.0% | |
| GTGCATTCTGTAGCCATCAA+AGG | - | chr6.3:6963880-6963899 | MS.gene20427:intron | 45.0% | |
| GTTTGTCCAAAGGACCAACT+GGG | + | chr6.3:6964045-6964064 | None:intergenic | 45.0% | |
| TATGAAGCAAGGACACTCCT+CGG | + | chr6.3:6963664-6963683 | None:intergenic | 45.0% | |
| TCCAGTGTAGGTTTGTCCAA+AGG | + | chr6.3:6964055-6964074 | None:intergenic | 45.0% | |
| TCCTTTGGACAAACCTACAC+TGG | - | chr6.3:6964051-6964070 | MS.gene20427:CDS | 45.0% | |
| TTGGACAAACCTACACTGGA+AGG | - | chr6.3:6964055-6964074 | MS.gene20427:CDS | 45.0% | |
| TTGTCCCCAATTCCTTGACA+TGG | + | chr6.3:6963926-6963945 | None:intergenic | 45.0% | |
| TTTGTAGTCACCACGGGTAA+TGG | - | chr6.3:6963988-6964007 | MS.gene20427:CDS | 45.0% | |
| ! | AGCCATGGAGACACCATTTT+GGG | + | chr6.3:6963242-6963261 | None:intergenic | 45.0% |
| ! | GATTAGTTGTGTCCTGGTGT+CGG | + | chr6.3:6963642-6963661 | None:intergenic | 45.0% |
| ! | GGCTAGTTCAAGGTTCAACT+TGG | - | chr6.3:6962997-6963016 | MS.gene20427:intron | 45.0% |
| ! | TAAATTTCAGGTGGGGCTTG+TGG | - | chr6.3:6963102-6963121 | MS.gene20427:intron | 45.0% |
| AACCAGACCAGACATCGAAC+CGG | - | chr6.3:6962882-6962901 | MS.gene20427:intron | 50.0% | |
| ACCAGGACACAACTAATCCG+AGG | - | chr6.3:6963644-6963663 | MS.gene20427:intron | 50.0% | |
| AGCATCACTGCCACCATAGA+AGG | + | chr6.3:6962576-6962595 | None:intergenic | 50.0% | |
| ATTTCTGTCCACCTGGTGGT+TGG | - | chr6.3:6963283-6963302 | MS.gene20427:CDS | 50.0% | |
| CAGTGATGCTTCTGGCACAA+TGG | - | chr6.3:6962586-6962605 | MS.gene20427:CDS | 50.0% | |
| CTAGATGGCAAGCCATGTCA+AGG | - | chr6.3:6963911-6963930 | MS.gene20427:intron | 50.0% | |
| GACCCAAAATGGTGTCTCCA+TGG | - | chr6.3:6963237-6963256 | MS.gene20427:CDS | 50.0% | |
| GCACATGCAACCTTCTATGG+TGG | - | chr6.3:6962563-6962582 | MS.gene20427:CDS | 50.0% | |
| GCCACTAATTTCTGTCCACC+TGG | - | chr6.3:6963276-6963295 | MS.gene20427:CDS | 50.0% | |
| GGCAAGCCATGTCAAGGAAT+TGG | - | chr6.3:6963917-6963936 | MS.gene20427:intron | 50.0% | |
| GGTTTGTCCAAAGGACCAAC+TGG | + | chr6.3:6964046-6964065 | None:intergenic | 50.0% | |
| TATGGTGGCAGTGATGCTTC+TGG | - | chr6.3:6962578-6962597 | MS.gene20427:CDS | 50.0% | |
| TTAATGTTGCCCCACCCAGT+TGG | - | chr6.3:6964028-6964047 | MS.gene20427:CDS | 50.0% | |
| ! | GAGCCATGGAGACACCATTT+TGG | + | chr6.3:6963243-6963262 | None:intergenic | 50.0% |
| ! | GTGACTAATGTTGGAGGTGC+TGG | - | chr6.3:6963853-6963872 | MS.gene20427:intron | 50.0% |
| !! | TCCTCGGATTAGTTGTGTCC+TGG | + | chr6.3:6963648-6963667 | None:intergenic | 50.0% |
| GAGGAACTGCCTTCCAGTGT+AGG | + | chr6.3:6964067-6964086 | None:intergenic | 55.0% | |
| GCACGGATACGGACACAACA+CGG | - | chr6.3:6963529-6963548 | MS.gene20427:intron | 55.0% | |
| GTCCAAAGGACCAACTGGGT+GGG | + | chr6.3:6964041-6964060 | None:intergenic | 55.0% | |
| TCAGGTGGGGCTTGTGGATA+TGG | - | chr6.3:6963108-6963127 | MS.gene20427:intron | 55.0% | |
| TCCAAAGGACCAACTGGGTG+GGG | + | chr6.3:6964040-6964059 | None:intergenic | 55.0% | |
| TGTCCAAAGGACCAACTGGG+TGG | + | chr6.3:6964042-6964061 | None:intergenic | 55.0% | |
| !! | AGTCTCACCGGTTCGATGTC+TGG | + | chr6.3:6962892-6962911 | None:intergenic | 55.0% |
| CACGTCATGTGTCCGACACC+AGG | - | chr6.3:6963627-6963646 | MS.gene20427:intron | 60.0% | |
| !! | CACCGGTTCGATGTCTGGTC+TGG | + | chr6.3:6962887-6962906 | None:intergenic | 60.0% |
| GCCCCACCCAGTTGGTCCTT+TGG | - | chr6.3:6964036-6964055 | MS.gene20427:CDS | 65.0% | |
| GGAGGGTCACACCAACCACC+AGG | + | chr6.3:6963297-6963316 | None:intergenic | 65.0% | |
| GGGTCACACCAACCACCAGG+TGG | + | chr6.3:6963294-6963313 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 6962473 | 6964092 | 6962473 | ID=MS.gene20427 |
| chr6.3 | mRNA | 6962473 | 6964092 | 6962473 | ID=MS.gene20427.t1;Parent=MS.gene20427 |
| chr6.3 | exon | 6963957 | 6964092 | 6963957 | ID=MS.gene20427.t1.exon1;Parent=MS.gene20427.t1 |
| chr6.3 | CDS | 6963957 | 6964092 | 6963957 | ID=cds.MS.gene20427.t1;Parent=MS.gene20427.t1 |
| chr6.3 | exon | 6963165 | 6963453 | 6963165 | ID=MS.gene20427.t1.exon2;Parent=MS.gene20427.t1 |
| chr6.3 | CDS | 6963165 | 6963453 | 6963165 | ID=cds.MS.gene20427.t1;Parent=MS.gene20427.t1 |
| chr6.3 | exon | 6962473 | 6962782 | 6962473 | ID=MS.gene20427.t1.exon3;Parent=MS.gene20427.t1 |
| chr6.3 | CDS | 6962473 | 6962782 | 6962473 | ID=cds.MS.gene20427.t1;Parent=MS.gene20427.t1 |
| Gene Sequence |
| Protein sequence |
