Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21693.t1 | XP_003610942.1 | 98.2 | 272 | 4 | 1 | 1 | 271 | 1 | 272 | 6.40E-147 | 530 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21693.t1 | G7K975 | 98.2 | 272 | 4 | 1 | 1 | 271 | 1 | 272 | 4.6e-147 | 530.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene21693 | 0.880693 | 4.45E-70 | -1.69E-46 |
MS.gene049173 | MS.gene21693 | 0.846988 | 1.54E-59 | -1.69E-46 |
MS.gene049217 | MS.gene21693 | 0.876562 | 1.26E-68 | -1.69E-46 |
MS.gene049222 | MS.gene21693 | 0.880966 | 3.55E-70 | -1.69E-46 |
MS.gene049232 | MS.gene21693 | 0.859209 | 4.84E-63 | -1.69E-46 |
MS.gene049285 | MS.gene21693 | 0.922123 | 1.48E-88 | -1.69E-46 |
MS.gene049320 | MS.gene21693 | 0.901937 | 1.62E-78 | -1.69E-46 |
MS.gene049369 | MS.gene21693 | 0.807105 | 5.95E-50 | -1.69E-46 |
MS.gene04939 | MS.gene21693 | 0.852476 | 4.50E-61 | -1.69E-46 |
MS.gene049609 | MS.gene21693 | 0.843533 | 1.32E-58 | -1.69E-46 |
MS.gene049611 | MS.gene21693 | -0.819784 | 9.68E-53 | -1.69E-46 |
MS.gene049627 | MS.gene21693 | 0.814703 | 1.35E-51 | -1.69E-46 |
MS.gene049633 | MS.gene21693 | 0.878838 | 2.03E-69 | -1.69E-46 |
MS.gene049634 | MS.gene21693 | -0.806294 | 8.82E-50 | -1.69E-46 |
MS.gene049805 | MS.gene21693 | 0.833485 | 5.19E-56 | -1.69E-46 |
MS.gene05010 | MS.gene21693 | 0.859207 | 4.85E-63 | -1.69E-46 |
MS.gene050163 | MS.gene21693 | 0.902621 | 8.04E-79 | -1.69E-46 |
MS.gene050165 | MS.gene21693 | 0.901329 | 2.99E-78 | -1.69E-46 |
MS.gene050170 | MS.gene21693 | 0.845217 | 4.66E-59 | -1.69E-46 |
MS.gene050216 | MS.gene21693 | 0.815903 | 7.28E-52 | -1.69E-46 |
MS.gene050323 | MS.gene21693 | 0.877741 | 4.93E-69 | -1.69E-46 |
MS.gene050333 | MS.gene21693 | 0.898261 | 6.31E-77 | -1.69E-46 |
MS.gene050444 | MS.gene21693 | 0.893403 | 6.49E-75 | -1.69E-46 |
MS.gene050496 | MS.gene21693 | 0.878987 | 1.80E-69 | -1.69E-46 |
MS.gene050504 | MS.gene21693 | 0.901762 | 1.93E-78 | -1.69E-46 |
MS.gene050518 | MS.gene21693 | 0.886756 | 2.59E-72 | -1.69E-46 |
MS.gene050577 | MS.gene21693 | 0.840036 | 1.11E-57 | -1.69E-46 |
MS.gene050593 | MS.gene21693 | 0.820318 | 7.31E-53 | -1.69E-46 |
MS.gene050612 | MS.gene21693 | 0.912706 | 1.43E-83 | -1.69E-46 |
MS.gene050662 | MS.gene21693 | 0.823389 | 1.42E-53 | -1.69E-46 |
MS.gene050675 | MS.gene21693 | 0.919671 | 3.36E-87 | -1.69E-46 |
MS.gene050699 | MS.gene21693 | 0.903627 | 2.85E-79 | -1.69E-46 |
MS.gene050747 | MS.gene21693 | 0.83637 | 9.74E-57 | -1.69E-46 |
MS.gene050772 | MS.gene21693 | 0.884358 | 2.05E-71 | -1.69E-46 |
MS.gene05079 | MS.gene21693 | -0.832535 | 8.94E-56 | -1.69E-46 |
MS.gene05080 | MS.gene21693 | 0.842156 | 3.07E-58 | -1.69E-46 |
MS.gene050868 | MS.gene21693 | 0.871956 | 4.60E-67 | -1.69E-46 |
MS.gene050871 | MS.gene21693 | 0.870755 | 1.15E-66 | -1.69E-46 |
MS.gene050876 | MS.gene21693 | 0.854204 | 1.44E-61 | -1.69E-46 |
MS.gene050904 | MS.gene21693 | 0.837858 | 4.06E-57 | -1.69E-46 |
MS.gene050950 | MS.gene21693 | 0.840206 | 1.00E-57 | -1.69E-46 |
MS.gene050986 | MS.gene21693 | 0.906248 | 1.82E-80 | -1.69E-46 |
MS.gene05100 | MS.gene21693 | 0.849416 | 3.28E-60 | -1.69E-46 |
MS.gene05104 | MS.gene21693 | -0.814083 | 1.85E-51 | -1.69E-46 |
MS.gene051138 | MS.gene21693 | -0.817239 | 3.66E-52 | -1.69E-46 |
MS.gene051228 | MS.gene21693 | 0.869837 | 2.29E-66 | -1.69E-46 |
MS.gene051268 | MS.gene21693 | 0.837024 | 6.63E-57 | -1.69E-46 |
MS.gene051317 | MS.gene21693 | 0.875043 | 4.20E-68 | -1.69E-46 |
MS.gene051366 | MS.gene21693 | -0.802217 | 6.23E-49 | -1.69E-46 |
MS.gene051551 | MS.gene21693 | 0.86952 | 2.91E-66 | -1.69E-46 |
MS.gene051617 | MS.gene21693 | 0.832368 | 9.84E-56 | -1.69E-46 |
MS.gene051651 | MS.gene21693 | -0.821078 | 4.89E-53 | -1.69E-46 |
MS.gene051694 | MS.gene21693 | 0.808233 | 3.42E-50 | -1.69E-46 |
MS.gene051810 | MS.gene21693 | 0.90022 | 9.10E-78 | -1.69E-46 |
MS.gene051838 | MS.gene21693 | 0.805637 | 1.21E-49 | -1.69E-46 |
MS.gene051858 | MS.gene21693 | 0.843735 | 1.17E-58 | -1.69E-46 |
MS.gene051874 | MS.gene21693 | 0.812077 | 5.08E-51 | -1.69E-46 |
MS.gene051949 | MS.gene21693 | 0.873888 | 1.04E-67 | -1.69E-46 |
MS.gene052129 | MS.gene21693 | -0.83039 | 3.02E-55 | -1.69E-46 |
MS.gene052164 | MS.gene21693 | 0.819672 | 1.03E-52 | -1.69E-46 |
MS.gene052271 | MS.gene21693 | 0.878134 | 3.59E-69 | -1.69E-46 |
MS.gene052379 | MS.gene21693 | 0.869192 | 3.72E-66 | -1.69E-46 |
MS.gene052482 | MS.gene21693 | 0.806537 | 7.84E-50 | -1.69E-46 |
MS.gene052486 | MS.gene21693 | 0.822793 | 1.96E-53 | -1.69E-46 |
MS.gene052503 | MS.gene21693 | 0.832273 | 1.04E-55 | -1.69E-46 |
MS.gene052506 | MS.gene21693 | 0.805652 | 1.20E-49 | -1.69E-46 |
MS.gene052615 | MS.gene21693 | 0.871042 | 9.23E-67 | -1.69E-46 |
MS.gene052822 | MS.gene21693 | 0.82534 | 4.94E-54 | -1.69E-46 |
MS.gene052823 | MS.gene21693 | 0.826407 | 2.76E-54 | -1.69E-46 |
MS.gene052825 | MS.gene21693 | 0.82002 | 8.55E-53 | -1.69E-46 |
MS.gene052870 | MS.gene21693 | 0.877229 | 7.43E-69 | -1.69E-46 |
MS.gene052872 | MS.gene21693 | 0.887227 | 1.72E-72 | -1.69E-46 |
MS.gene052916 | MS.gene21693 | 0.856222 | 3.72E-62 | -1.69E-46 |
MS.gene052966 | MS.gene21693 | 0.869275 | 3.50E-66 | -1.69E-46 |
MS.gene053009 | MS.gene21693 | 0.813548 | 2.42E-51 | -1.69E-46 |
MS.gene053104 | MS.gene21693 | 0.802013 | 6.86E-49 | -1.69E-46 |
MS.gene053203 | MS.gene21693 | 0.857507 | 1.56E-62 | -1.69E-46 |
MS.gene053207 | MS.gene21693 | 0.83937 | 1.65E-57 | -1.69E-46 |
MS.gene053213 | MS.gene21693 | 0.881428 | 2.42E-70 | -1.69E-46 |
MS.gene053286 | MS.gene21693 | 0.882805 | 7.66E-71 | -1.69E-46 |
MS.gene053322 | MS.gene21693 | 0.820473 | 6.73E-53 | -1.69E-46 |
MS.gene053384 | MS.gene21693 | 0.816483 | 5.40E-52 | -1.69E-46 |
MS.gene053420 | MS.gene21693 | -0.807998 | 3.84E-50 | -1.69E-46 |
MS.gene053436 | MS.gene21693 | 0.804591 | 2.01E-49 | -1.69E-46 |
MS.gene053449 | MS.gene21693 | 0.807487 | 4.93E-50 | -1.69E-46 |
MS.gene053479 | MS.gene21693 | 0.857332 | 1.75E-62 | -1.69E-46 |
MS.gene053480 | MS.gene21693 | 0.83597 | 1.23E-56 | -1.69E-46 |
MS.gene053574 | MS.gene21693 | 0.842256 | 2.89E-58 | -1.69E-46 |
MS.gene053632 | MS.gene21693 | 0.865239 | 6.82E-65 | -1.69E-46 |
MS.gene053633 | MS.gene21693 | 0.826234 | 3.03E-54 | -1.69E-46 |
MS.gene053824 | MS.gene21693 | 0.873112 | 1.89E-67 | -1.69E-46 |
MS.gene053916 | MS.gene21693 | 0.838806 | 2.31E-57 | -1.69E-46 |
MS.gene054408 | MS.gene21693 | 0.818616 | 1.79E-52 | -1.69E-46 |
MS.gene054595 | MS.gene21693 | 0.861536 | 9.58E-64 | -1.69E-46 |
MS.gene054600 | MS.gene21693 | 0.878399 | 2.90E-69 | -1.69E-46 |
MS.gene054642 | MS.gene21693 | 0.892287 | 1.82E-74 | -1.69E-46 |
MS.gene05470 | MS.gene21693 | 0.843047 | 1.78E-58 | -1.69E-46 |
MS.gene05494 | MS.gene21693 | 0.816707 | 4.81E-52 | -1.69E-46 |
MS.gene054954 | MS.gene21693 | 0.918199 | 2.09E-86 | -1.69E-46 |
MS.gene05505 | MS.gene21693 | 0.829006 | 6.55E-55 | -1.69E-46 |
MS.gene055206 | MS.gene21693 | 0.853209 | 2.78E-61 | -1.69E-46 |
MS.gene055212 | MS.gene21693 | 0.829671 | 4.52E-55 | -1.69E-46 |
MS.gene055224 | MS.gene21693 | 0.825798 | 3.85E-54 | -1.69E-46 |
MS.gene055362 | MS.gene21693 | 0.896327 | 4.10E-76 | -1.69E-46 |
MS.gene055397 | MS.gene21693 | 0.831412 | 1.69E-55 | -1.69E-46 |
MS.gene055499 | MS.gene21693 | 0.808105 | 3.65E-50 | -1.69E-46 |
MS.gene055502 | MS.gene21693 | 0.893377 | 6.65E-75 | -1.69E-46 |
MS.gene055577 | MS.gene21693 | 0.876974 | 9.11E-69 | -1.69E-46 |
MS.gene055634 | MS.gene21693 | 0.804852 | 1.77E-49 | -1.69E-46 |
MS.gene055636 | MS.gene21693 | 0.851489 | 8.58E-61 | -1.69E-46 |
MS.gene055638 | MS.gene21693 | 0.843477 | 1.37E-58 | -1.69E-46 |
MS.gene055647 | MS.gene21693 | 0.849391 | 3.33E-60 | -1.69E-46 |
MS.gene055722 | MS.gene21693 | 0.866309 | 3.13E-65 | -1.69E-46 |
MS.gene055748 | MS.gene21693 | 0.865615 | 5.19E-65 | -1.69E-46 |
MS.gene055750 | MS.gene21693 | 0.862857 | 3.77E-64 | -1.69E-46 |
MS.gene055751 | MS.gene21693 | 0.8774 | 6.48E-69 | -1.69E-46 |
MS.gene055776 | MS.gene21693 | 0.871644 | 5.84E-67 | -1.69E-46 |
MS.gene05589 | MS.gene21693 | 0.856916 | 2.33E-62 | -1.69E-46 |
MS.gene05592 | MS.gene21693 | 0.845023 | 5.26E-59 | -1.69E-46 |
MS.gene055941 | MS.gene21693 | 0.878636 | 2.39E-69 | -1.69E-46 |
MS.gene055942 | MS.gene21693 | -0.821402 | 4.12E-53 | -1.69E-46 |
MS.gene055956 | MS.gene21693 | -0.823351 | 1.45E-53 | -1.69E-46 |
MS.gene056046 | MS.gene21693 | 0.802787 | 4.75E-49 | -1.69E-46 |
MS.gene056083 | MS.gene21693 | 0.8342 | 3.44E-56 | -1.69E-46 |
MS.gene056374 | MS.gene21693 | 0.86275 | 4.06E-64 | -1.69E-46 |
MS.gene056387 | MS.gene21693 | 0.839614 | 1.43E-57 | -1.69E-46 |
MS.gene056449 | MS.gene21693 | 0.816898 | 4.36E-52 | -1.69E-46 |
MS.gene056487 | MS.gene21693 | 0.821111 | 4.80E-53 | -1.69E-46 |
MS.gene056504 | MS.gene21693 | 0.889175 | 3.06E-73 | -1.69E-46 |
MS.gene056510 | MS.gene21693 | 0.913399 | 6.44E-84 | -1.69E-46 |
MS.gene056549 | MS.gene21693 | 0.847392 | 1.19E-59 | -1.69E-46 |
MS.gene056657 | MS.gene21693 | 0.91884 | 9.47E-87 | -1.69E-46 |
MS.gene056692 | MS.gene21693 | 0.852695 | 3.90E-61 | -1.69E-46 |
MS.gene056856 | MS.gene21693 | -0.814523 | 1.47E-51 | -1.69E-46 |
MS.gene056857 | MS.gene21693 | -0.81328 | 2.77E-51 | -1.69E-46 |
MS.gene056897 | MS.gene21693 | 0.802935 | 4.43E-49 | -1.69E-46 |
MS.gene056898 | MS.gene21693 | 0.837843 | 4.09E-57 | -1.69E-46 |
MS.gene056946 | MS.gene21693 | 0.815305 | 9.89E-52 | -1.69E-46 |
MS.gene056947 | MS.gene21693 | 0.805732 | 1.16E-49 | -1.69E-46 |
MS.gene057076 | MS.gene21693 | 0.852492 | 4.46E-61 | -1.69E-46 |
MS.gene057129 | MS.gene21693 | 0.827524 | 1.49E-54 | -1.69E-46 |
MS.gene057246 | MS.gene21693 | 0.800573 | 1.35E-48 | -1.69E-46 |
MS.gene057331 | MS.gene21693 | 0.849869 | 2.45E-60 | -1.69E-46 |
MS.gene057416 | MS.gene21693 | 0.863073 | 3.23E-64 | -1.69E-46 |
MS.gene057658 | MS.gene21693 | 0.818228 | 2.19E-52 | -1.69E-46 |
MS.gene057805 | MS.gene21693 | 0.80047 | 1.42E-48 | -1.69E-46 |
MS.gene057831 | MS.gene21693 | 0.863435 | 2.49E-64 | -1.69E-46 |
MS.gene057856 | MS.gene21693 | 0.801906 | 7.22E-49 | -1.69E-46 |
MS.gene057857 | MS.gene21693 | 0.856146 | 3.92E-62 | -1.69E-46 |
MS.gene05787 | MS.gene21693 | 0.800369 | 1.49E-48 | -1.69E-46 |
MS.gene057926 | MS.gene21693 | 0.852659 | 3.99E-61 | -1.69E-46 |
MS.gene058019 | MS.gene21693 | 0.818059 | 2.39E-52 | -1.69E-46 |
MS.gene058334 | MS.gene21693 | -0.822847 | 1.90E-53 | -1.69E-46 |
MS.gene058338 | MS.gene21693 | 0.829245 | 5.74E-55 | -1.69E-46 |
MS.gene05837 | MS.gene21693 | 0.833782 | 4.38E-56 | -1.69E-46 |
MS.gene058419 | MS.gene21693 | 0.893572 | 5.55E-75 | -1.69E-46 |
MS.gene058544 | MS.gene21693 | 0.851143 | 1.08E-60 | -1.69E-46 |
MS.gene058723 | MS.gene21693 | 0.860982 | 1.41E-63 | -1.69E-46 |
MS.gene058773 | MS.gene21693 | 0.894252 | 2.94E-75 | -1.69E-46 |
MS.gene058838 | MS.gene21693 | 0.842395 | 2.65E-58 | -1.69E-46 |
MS.gene059022 | MS.gene21693 | 0.905294 | 5.00E-80 | -1.69E-46 |
MS.gene059023 | MS.gene21693 | 0.877493 | 6.01E-69 | -1.69E-46 |
MS.gene059029 | MS.gene21693 | 0.856071 | 4.12E-62 | -1.69E-46 |
MS.gene059079 | MS.gene21693 | 0.820082 | 8.28E-53 | -1.69E-46 |
MS.gene05912 | MS.gene21693 | 0.839247 | 1.78E-57 | -1.69E-46 |
MS.gene05913 | MS.gene21693 | 0.858639 | 7.17E-63 | -1.69E-46 |
MS.gene059305 | MS.gene21693 | 0.850043 | 2.19E-60 | -1.69E-46 |
MS.gene05934 | MS.gene21693 | 0.83752 | 4.95E-57 | -1.69E-46 |
MS.gene059367 | MS.gene21693 | 0.815107 | 1.10E-51 | -1.69E-46 |
MS.gene059677 | MS.gene21693 | 0.917532 | 4.74E-86 | -1.69E-46 |
MS.gene059699 | MS.gene21693 | -0.826582 | 2.51E-54 | -1.69E-46 |
MS.gene059703 | MS.gene21693 | -0.827363 | 1.63E-54 | -1.69E-46 |
MS.gene059718 | MS.gene21693 | 0.889485 | 2.32E-73 | -1.69E-46 |
MS.gene059756 | MS.gene21693 | 0.877838 | 4.56E-69 | -1.69E-46 |
MS.gene059801 | MS.gene21693 | 0.818927 | 1.52E-52 | -1.69E-46 |
MS.gene059858 | MS.gene21693 | 0.816231 | 6.15E-52 | -1.69E-46 |
MS.gene059865 | MS.gene21693 | 0.898645 | 4.33E-77 | -1.69E-46 |
MS.gene059902 | MS.gene21693 | 0.830797 | 2.40E-55 | -1.69E-46 |
MS.gene059960 | MS.gene21693 | 0.818294 | 2.11E-52 | -1.69E-46 |
MS.gene06000 | MS.gene21693 | 0.843359 | 1.47E-58 | -1.69E-46 |
MS.gene060341 | MS.gene21693 | 0.820904 | 5.36E-53 | -1.69E-46 |
MS.gene060482 | MS.gene21693 | 0.820354 | 7.17E-53 | -1.69E-46 |
MS.gene060703 | MS.gene21693 | 0.884732 | 1.49E-71 | -1.69E-46 |
MS.gene060728 | MS.gene21693 | 0.820122 | 8.11E-53 | -1.69E-46 |
MS.gene060762 | MS.gene21693 | 0.894261 | 2.91E-75 | -1.69E-46 |
MS.gene060778 | MS.gene21693 | 0.852224 | 5.31E-61 | -1.69E-46 |
MS.gene06077 | MS.gene21693 | 0.869279 | 3.49E-66 | -1.69E-46 |
MS.gene060804 | MS.gene21693 | 0.808487 | 3.02E-50 | -1.69E-46 |
MS.gene060818 | MS.gene21693 | 0.817694 | 2.89E-52 | -1.69E-46 |
MS.gene060832 | MS.gene21693 | 0.803032 | 4.23E-49 | -1.69E-46 |
MS.gene060835 | MS.gene21693 | 0.813847 | 2.08E-51 | -1.69E-46 |
MS.gene06092 | MS.gene21693 | 0.820757 | 5.79E-53 | -1.69E-46 |
MS.gene060982 | MS.gene21693 | 0.88515 | 1.04E-71 | -1.69E-46 |
MS.gene061041 | MS.gene21693 | 0.823484 | 1.35E-53 | -1.69E-46 |
MS.gene061134 | MS.gene21693 | 0.846447 | 2.16E-59 | -1.69E-46 |
MS.gene061150 | MS.gene21693 | 0.875288 | 3.47E-68 | -1.69E-46 |
MS.gene061200 | MS.gene21693 | 0.831591 | 1.53E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21693.t1 | MTR_5g008750 | 98.162 | 272 | 4 | 1 | 1 | 271 | 1 | 272 | 0.0 | 547 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21693.t1 | AT1G71500 | 81.250 | 208 | 39 | 0 | 63 | 270 | 79 | 286 | 1.83e-118 | 341 |
Find 74 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACGGTAAAGCAGCTGTTAT+TGG | 0.227563 | 5.2:+2599881 | MS.gene21693:CDS |
TTTGAAGGGGACAGGTTTCT+TGG | 0.252403 | 5.2:+2599949 | MS.gene21693:CDS |
AAATATTTGCCATTGAAAAT+AGG | 0.303614 | 5.2:+2598313 | MS.gene21693:CDS |
TATTGGATTCCTTCTGTTGT+TGG | 0.321162 | 5.2:+2599898 | MS.gene21693:CDS |
GATGAGAGTCAACTGGGATT+TGG | 0.344981 | 5.2:+2599833 | MS.gene21693:CDS |
ACTCTCAGAACAGGATTGTT+TGG | 0.366935 | 5.2:-2599530 | None:intergenic |
GAAGAGCAGGAGAGGGATAG+AGG | 0.369307 | 5.2:-2598039 | None:intergenic |
AGCGCCGTCACCGGCACAAC+CGG | 0.370822 | 5.2:-2598222 | None:intergenic |
TGACCAATCGCATAGACTTT+GGG | 0.389283 | 5.2:-2598143 | None:intergenic |
GTGACCAATCGCATAGACTT+TGG | 0.393331 | 5.2:-2598144 | None:intergenic |
AGTGTGTGTTTGAGAAGAGC+AGG | 0.401321 | 5.2:-2598052 | None:intergenic |
TGGCGGGAGAGGAGAAGAAA+AGG | 0.404281 | 5.2:-2598102 | None:intergenic |
GAGTTCTAACACCTGCTTTG+AGG | 0.431159 | 5.2:+2599549 | MS.gene21693:CDS |
AAGAGCAGGAGAGGGATAGA+GGG | 0.443083 | 5.2:-2598038 | None:intergenic |
TAGAGGGTTGGTAGCGGCCA+TGG | 0.452401 | 5.2:-2598022 | None:intergenic |
CGGTGACGGCGCTGCCGAGA+GGG | 0.459160 | 5.2:+2598232 | MS.gene21693:CDS |
AACTGGGATTTGGTTTCAAT+AGG | 0.460026 | 5.2:+2599843 | MS.gene21693:CDS |
AGCGGTTAGAGTGGCGGGAG+AGG | 0.473023 | 5.2:-2598113 | None:intergenic |
GGTGGTTGATGAGAGTCAAC+TGG | 0.480124 | 5.2:+2599826 | MS.gene21693:CDS |
AGCACATTTGATCTAAGAAC+AGG | 0.481228 | 5.2:+2599488 | MS.gene21693:CDS |
TCAGAATAAGCACCTTCAGC+AGG | 0.482430 | 5.2:-2598339 | None:intergenic |
GGTGTTAGAACTCTCAGAAC+AGG | 0.487394 | 5.2:-2599539 | None:intergenic |
GTGTTTGAGAAGAGCAGGAG+AGG | 0.489201 | 5.2:-2598047 | None:intergenic |
TCTAAGAACAGGAGAGATCA+AGG | 0.490541 | 5.2:+2599499 | MS.gene21693:CDS |
GCGATTGGTCACAACGTGTA+AGG | 0.493163 | 5.2:+2598155 | MS.gene21693:CDS |
TGCGTAGCGGTTAGAGTGGC+GGG | 0.497650 | 5.2:-2598118 | None:intergenic |
CTACTGAAATTCTCTTTAGC+GGG | 0.502112 | 5.2:+2599651 | MS.gene21693:CDS |
GCTGAAGGTGCTTATTCTGA+GGG | 0.503715 | 5.2:+2598342 | MS.gene21693:CDS |
GTAACTAACCTGTGTGAGCT+TGG | 0.505958 | 5.2:-2598376 | None:intergenic |
GCAGGAGAGGGATAGAGGGT+TGG | 0.508740 | 5.2:-2598034 | None:intergenic |
TGCTGAAGGTGCTTATTCTG+AGG | 0.509178 | 5.2:+2598341 | MS.gene21693:CDS |
TGTTTGAGAAGAGCAGGAGA+GGG | 0.509351 | 5.2:-2598046 | None:intergenic |
CGGCGCTGCCGAGAGGGGAG+AGG | 0.510141 | 5.2:+2598238 | MS.gene21693:CDS |
TATGACTGTTTAGGTCAGAA+TGG | 0.512563 | 5.2:+2599805 | MS.gene21693:intron |
TCAAATGTGCTGTCAGTTGT+TGG | 0.515547 | 5.2:-2599476 | None:intergenic |
AAACTGGGTTCCGGTTGTGC+CGG | 0.521653 | 5.2:+2598212 | MS.gene21693:CDS |
ACATCGCTTGCTGTTATACC+AGG | 0.526210 | 5.2:-2599683 | None:intergenic |
ACAAAGAGGTTCCTCAAAGC+AGG | 0.529140 | 5.2:-2599560 | None:intergenic |
GAAAAGGTTTACGTGGGAGA+AGG | 0.529528 | 5.2:-2598086 | None:intergenic |
AGGAGAAGAAAAGGTTTACG+TGG | 0.531404 | 5.2:-2598093 | None:intergenic |
AGCATCAGATTTGAAACCTC+CGG | 0.532026 | 5.2:-2599627 | None:intergenic |
AATATTTATATCAGCATCAC+CGG | 0.534811 | 5.2:+2599608 | MS.gene21693:CDS |
CCTCTCGGCAGCGCCGTCAC+CGG | 0.535950 | 5.2:-2598231 | None:intergenic |
GGTTCCGGTTGTGCCGGTGA+CGG | 0.540591 | 5.2:+2598218 | MS.gene21693:CDS |
GCTACTGAAATTCTCTTTAG+CGG | 0.547042 | 5.2:+2599650 | MS.gene21693:CDS |
GAGGGATAGAGGGTTGGTAG+CGG | 0.549456 | 5.2:-2598028 | None:intergenic |
GTGCGTAGCGGTTAGAGTGG+CGG | 0.551558 | 5.2:-2598119 | None:intergenic |
CAAATGTGCTGTCAGTTGTT+GGG | 0.553575 | 5.2:-2599475 | None:intergenic |
TTACGTGGGAGAAGGAAATG+AGG | 0.558204 | 5.2:-2598078 | None:intergenic |
GGAGAAGAAAAGGTTTACGT+GGG | 0.562615 | 5.2:-2598092 | None:intergenic |
CCGGTGACGGCGCTGCCGAG+AGG | 0.566317 | 5.2:+2598231 | MS.gene21693:CDS |
CAGAATAAGCACCTTCAGCA+GGG | 0.566319 | 5.2:-2598338 | None:intergenic |
ACGCCCAAAGTCTATGCGAT+TGG | 0.567023 | 5.2:+2598140 | MS.gene21693:CDS |
AGGCGTGTCATAATTCAAGA+AGG | 0.569370 | 5.2:+2598258 | MS.gene21693:CDS |
TTTAGCGGGAAGGCTCAGCC+TGG | 0.582087 | 5.2:+2599665 | MS.gene21693:CDS |
TGAAATTCTCTTTAGCGGGA+AGG | 0.583788 | 5.2:+2599655 | MS.gene21693:CDS |
GAAAATAGGTCCCCTGCTGA+AGG | 0.583894 | 5.2:+2598327 | MS.gene21693:CDS |
GGCGTGTCATAATTCAAGAA+GGG | 0.590708 | 5.2:+2598259 | MS.gene21693:CDS |
GGTGACGGCGCTGCCGAGAG+GGG | 0.594296 | 5.2:+2598233 | MS.gene21693:CDS |
GTTCGAAATCCAACAACAGA+AGG | 0.602476 | 5.2:-2599907 | None:intergenic |
GGCGTGCGTAGCGGTTAGAG+TGG | 0.612488 | 5.2:-2598122 | None:intergenic |
ATGACACGCCTCTCCCCTCT+CGG | 0.613589 | 5.2:-2598246 | None:intergenic |
TTTGGACGACTCTTCAGCCA+CGG | 0.618145 | 5.2:-2598190 | None:intergenic |
GCGTGTCATAATTCAAGAAG+GGG | 0.628961 | 5.2:+2598260 | MS.gene21693:CDS |
AAGCGATGTCAATGTGGACG+AGG | 0.630134 | 5.2:+2599697 | MS.gene21693:CDS |
TAGACTTTGGGCGTGCGTAG+CGG | 0.631955 | 5.2:-2598131 | None:intergenic |
TAAGGCAAGTCAAGTGTCCG+TGG | 0.635413 | 5.2:+2598173 | MS.gene21693:CDS |
AGAATAAGCACCTTCAGCAG+GGG | 0.654961 | 5.2:-2598337 | None:intergenic |
GAACAGGAGAGATCAAGGAA+TGG | 0.658017 | 5.2:+2599504 | MS.gene21693:CDS |
GACTGTTTAGGTCAGAATGG+TGG | 0.660971 | 5.2:+2599808 | MS.gene21693:intron |
AACAGCAAGCGATGTCAATG+TGG | 0.661153 | 5.2:+2599691 | MS.gene21693:CDS |
AGGAAGAACGAAATAATCAA+CGG | 0.661244 | 5.2:+2599863 | MS.gene21693:CDS |
ATTTATATCAGCATCACCGG+AGG | 0.666199 | 5.2:+2599611 | MS.gene21693:CDS |
GTGGTTGATGAGAGTCAACT+GGG | 0.691875 | 5.2:+2599827 | MS.gene21693:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAGCACTTATTAAAATAAT+TGG | + | chr5.2:2598466-2598485 | MS.gene21693:intron | 15.0% |
!!! | TATTTTTTTTATGACTGTTT+AGG | + | chr5.2:2599796-2599815 | MS.gene21693:intron | 15.0% |
!!! | TCTTTTCATTTACAAATTTT+TGG | - | chr5.2:2598968-2598987 | None:intergenic | 15.0% |
!! | AAAAGAAAGAAGCAAAAATT+AGG | + | chr5.2:2598982-2599001 | MS.gene21693:intron | 20.0% |
!! | AAATATTTGCCATTGAAAAT+AGG | + | chr5.2:2598313-2598332 | MS.gene21693:CDS | 20.0% |
!! | ACATTCTGATCAATTATATA+TGG | + | chr5.2:2599736-2599755 | MS.gene21693:intron | 20.0% |
!! | ACTAATTAATAACTTTGCAA+GGG | - | chr5.2:2599382-2599401 | None:intergenic | 20.0% |
!! | AGTCATTGAATTTCAAAATA+AGG | - | chr5.2:2598746-2598765 | None:intergenic | 20.0% |
!!! | ATTTTGAAATTCAATGACTA+TGG | + | chr5.2:2598747-2598766 | MS.gene21693:intron | 20.0% |
! | AAATCTGACCTAATTAAATC+AGG | + | chr5.2:2599027-2599046 | MS.gene21693:intron | 25.0% |
! | AATATTTATATCAGCATCAC+CGG | + | chr5.2:2599608-2599627 | MS.gene21693:CDS | 25.0% |
! | AATCTGACCTAATTAAATCA+GGG | + | chr5.2:2599028-2599047 | MS.gene21693:intron | 25.0% |
! | ACTATTTCCCTGATTTAATT+AGG | - | chr5.2:2599038-2599057 | None:intergenic | 25.0% |
! | AGAAATATTTGACACGTTAT+AGG | + | chr5.2:2598672-2598691 | MS.gene21693:intron | 25.0% |
! | CAAAGAGAAAACAAAACAAT+TGG | - | chr5.2:2599435-2599454 | None:intergenic | 25.0% |
! | GACTAATTAATAACTTTGCA+AGG | - | chr5.2:2599383-2599402 | None:intergenic | 25.0% |
! | TTAATATAAGCTTAACCCTA+AGG | - | chr5.2:2598642-2598661 | None:intergenic | 25.0% |
! | TTTCTTAGGATAATGTCTTT+AGG | + | chr5.2:2598399-2598418 | MS.gene21693:intron | 25.0% |
!! | AATGCATGATAATGTCAATT+GGG | + | chr5.2:2599280-2599299 | MS.gene21693:intron | 25.0% |
!! | ACTGAAAATCTGATTTTCAT+TGG | + | chr5.2:2598821-2598840 | MS.gene21693:intron | 25.0% |
!! | CCTATCAAAACAACTTTTAT+AGG | + | chr5.2:2598426-2598445 | MS.gene21693:intron | 25.0% |
!! | TCTTCATCTTTGATTTACTT+CGG | - | chr5.2:2599065-2599084 | None:intergenic | 25.0% |
!!! | CCTATAAAAGTTGTTTTGAT+AGG | - | chr5.2:2598429-2598448 | None:intergenic | 25.0% |
!!! | GGTCTTTTTTTAAGCAAAAT+CGG | + | chr5.2:2598862-2598881 | MS.gene21693:intron | 25.0% |
AACAATCAAAACTACTAGGT+TGG | + | chr5.2:2598910-2598929 | MS.gene21693:intron | 30.0% | |
AATTAATAACTTTGCAAGGG+TGG | - | chr5.2:2599379-2599398 | None:intergenic | 30.0% | |
AGGAAGAACGAAATAATCAA+CGG | + | chr5.2:2599863-2599882 | MS.gene21693:CDS | 30.0% | |
ATGTTCGTACATATCACAAT+TGG | + | chr5.2:2598703-2598722 | MS.gene21693:intron | 30.0% | |
TATATATGGACTCATTGCAA+TGG | + | chr5.2:2599750-2599769 | MS.gene21693:intron | 30.0% | |
TGTCAACAATCAAAACTACT+AGG | + | chr5.2:2598906-2598925 | MS.gene21693:intron | 30.0% | |
TGTTCGTACATATCACAATT+GGG | + | chr5.2:2598704-2598723 | MS.gene21693:intron | 30.0% | |
! | CAATGCATGATAATGTCAAT+TGG | + | chr5.2:2599279-2599298 | MS.gene21693:intron | 30.0% |
! | TTCGAACTTTTAACAGGTAA+GGG | + | chr5.2:2599923-2599942 | MS.gene21693:CDS | 30.0% |
! | TTGGATTTCGAACTTTTAAC+AGG | + | chr5.2:2599917-2599936 | MS.gene21693:CDS | 30.0% |
! | TTTCGAACTTTTAACAGGTA+AGG | + | chr5.2:2599922-2599941 | MS.gene21693:CDS | 30.0% |
! | TTTTGACAGGATATACAAAG+AGG | - | chr5.2:2599577-2599596 | None:intergenic | 30.0% |
!!! | GGTCAGATTTTTTCAACAAT+AGG | - | chr5.2:2599017-2599036 | None:intergenic | 30.0% |
!!! | TTGTTTTGTTTTCTCTTTGC+AGG | + | chr5.2:2599436-2599455 | MS.gene21693:intron | 30.0% |
ACCCTAAGGAAAGACTAATT+CGG | - | chr5.2:2598628-2598647 | None:intergenic | 35.0% | |
AGCACATTTGATCTAAGAAC+AGG | + | chr5.2:2599488-2599507 | MS.gene21693:CDS | 35.0% | |
CTACTGAAATTCTCTTTAGC+GGG | + | chr5.2:2599651-2599670 | MS.gene21693:CDS | 35.0% | |
GCTACTGAAATTCTCTTTAG+CGG | + | chr5.2:2599650-2599669 | MS.gene21693:CDS | 35.0% | |
TATGACTGTTTAGGTCAGAA+TGG | + | chr5.2:2599805-2599824 | MS.gene21693:intron | 35.0% | |
TATTGGATTCCTTCTGTTGT+TGG | + | chr5.2:2599898-2599917 | MS.gene21693:CDS | 35.0% | |
! | AACTGGGATTTGGTTTCAAT+AGG | + | chr5.2:2599843-2599862 | MS.gene21693:CDS | 35.0% |
! | CACAGGTTAGTTACTTTCTT+AGG | + | chr5.2:2598385-2598404 | MS.gene21693:intron | 35.0% |
! | CATCTTTGATTTACTTCGGT+GGG | - | chr5.2:2599061-2599080 | None:intergenic | 35.0% |
! | TCATCTTTGATTTACTTCGG+TGG | - | chr5.2:2599062-2599081 | None:intergenic | 35.0% |
!! | TCCGAATTAGTCTTTCCTTA+GGG | + | chr5.2:2598624-2598643 | MS.gene21693:intron | 35.0% |
!! | TTTGTTTTCTCTTTGCAGGA+TGG | + | chr5.2:2599440-2599459 | MS.gene21693:intron | 35.0% |
!!! | TTTTGTTCGTCTGTTTTGAC+AGG | - | chr5.2:2599590-2599609 | None:intergenic | 35.0% |
AACGGTAAAGCAGCTGTTAT+TGG | + | chr5.2:2599881-2599900 | MS.gene21693:CDS | 40.0% | |
AACGTACACGAAAAAGGTCT+TGG | - | chr5.2:2599254-2599273 | None:intergenic | 40.0% | |
ACGTACACGAAAAAGGTCTT+GGG | - | chr5.2:2599253-2599272 | None:intergenic | 40.0% | |
ACTCTCAGAACAGGATTGTT+TGG | - | chr5.2:2599533-2599552 | None:intergenic | 40.0% | |
ACTTATATGATTGCCCACGT+GGG | + | chr5.2:2598504-2598523 | MS.gene21693:intron | 40.0% | |
AGGAGAAGAAAAGGTTTACG+TGG | - | chr5.2:2598096-2598115 | None:intergenic | 40.0% | |
AGGCGTGTCATAATTCAAGA+AGG | + | chr5.2:2598258-2598277 | MS.gene21693:CDS | 40.0% | |
ATTTATATCAGCATCACCGG+AGG | + | chr5.2:2599611-2599630 | MS.gene21693:CDS | 40.0% | |
CAAATGTGCTGTCAGTTGTT+GGG | - | chr5.2:2599478-2599497 | None:intergenic | 40.0% | |
CTAAGGAAAGACTAATTCGG+AGG | - | chr5.2:2598625-2598644 | None:intergenic | 40.0% | |
CTTCACCATAGTCTAAACCT+CGG | + | chr5.2:2599172-2599191 | MS.gene21693:intron | 40.0% | |
GATGAAGATGCCATATGAAG+CGG | + | chr5.2:2599077-2599096 | MS.gene21693:intron | 40.0% | |
GCGTGTCATAATTCAAGAAG+GGG | + | chr5.2:2598260-2598279 | MS.gene21693:CDS | 40.0% | |
GGAGAAGAAAAGGTTTACGT+GGG | - | chr5.2:2598095-2598114 | None:intergenic | 40.0% | |
GGCGTGTCATAATTCAAGAA+GGG | + | chr5.2:2598259-2598278 | MS.gene21693:CDS | 40.0% | |
GTTCGAAATCCAACAACAGA+AGG | - | chr5.2:2599910-2599929 | None:intergenic | 40.0% | |
TACTGATAAGCCGCTTCATA+TGG | - | chr5.2:2599090-2599109 | None:intergenic | 40.0% | |
TCAAATGTGCTGTCAGTTGT+TGG | - | chr5.2:2599479-2599498 | None:intergenic | 40.0% | |
TCTAAGAACAGGAGAGATCA+AGG | + | chr5.2:2599499-2599518 | MS.gene21693:CDS | 40.0% | |
TGAAATTCTCTTTAGCGGGA+AGG | + | chr5.2:2599655-2599674 | MS.gene21693:CDS | 40.0% | |
TGAAGAGTCGTCCAAAAACT+GGG | + | chr5.2:2598197-2598216 | MS.gene21693:CDS | 40.0% | |
TGACCAATCGCATAGACTTT+GGG | - | chr5.2:2598146-2598165 | None:intergenic | 40.0% | |
TGGAAAGAAGCGATTGCTAT+AGG | + | chr5.2:2598841-2598860 | MS.gene21693:intron | 40.0% | |
! | AACAGGTAAGGGTCTTTTGA+AGG | + | chr5.2:2599934-2599953 | MS.gene21693:CDS | 40.0% |
! | ACAGGTAAGGGTCTTTTGAA+GGG | + | chr5.2:2599935-2599954 | MS.gene21693:CDS | 40.0% |
! | AGCATCAGATTTGAAACCTC+CGG | - | chr5.2:2599630-2599649 | None:intergenic | 40.0% |
!! | CTCCGAATTAGTCTTTCCTT+AGG | + | chr5.2:2598623-2598642 | MS.gene21693:intron | 40.0% |
!! | GGGAGACTATATTGCTTTTG+TGG | + | chr5.2:2598280-2598299 | MS.gene21693:CDS | 40.0% |
AACAGCAAGCGATGTCAATG+TGG | + | chr5.2:2599691-2599710 | MS.gene21693:CDS | 45.0% | |
ACAAAGAGGTTCCTCAAAGC+AGG | - | chr5.2:2599563-2599582 | None:intergenic | 45.0% | |
ACACGAAAAAGGTCTTGGGT+TGG | - | chr5.2:2599249-2599268 | None:intergenic | 45.0% | |
AGAATAAGCACCTTCAGCAG+GGG | - | chr5.2:2598340-2598359 | None:intergenic | 45.0% | |
AGTGTGTGTTTGAGAAGAGC+AGG | - | chr5.2:2598055-2598074 | None:intergenic | 45.0% | |
CACGAAAAAGGTCTTGGGTT+GGG | - | chr5.2:2599248-2599267 | None:intergenic | 45.0% | |
CACTTATATGATTGCCCACG+TGG | + | chr5.2:2598503-2598522 | MS.gene21693:intron | 45.0% | |
CAGAATAAGCACCTTCAGCA+GGG | - | chr5.2:2598341-2598360 | None:intergenic | 45.0% | |
CGAGGTTTAGACTATGGTGA+AGG | - | chr5.2:2599174-2599193 | None:intergenic | 45.0% | |
CTGAAGAGTCGTCCAAAAAC+TGG | + | chr5.2:2598196-2598215 | MS.gene21693:CDS | 45.0% | |
GAAAAATGCCAAGCTCACAC+AGG | + | chr5.2:2598368-2598387 | MS.gene21693:CDS | 45.0% | |
GAAAAGGTTTACGTGGGAGA+AGG | - | chr5.2:2598089-2598108 | None:intergenic | 45.0% | |
GAACAGGAGAGATCAAGGAA+TGG | + | chr5.2:2599504-2599523 | MS.gene21693:CDS | 45.0% | |
GAAGACCGAGGTTTAGACTA+TGG | - | chr5.2:2599180-2599199 | None:intergenic | 45.0% | |
GACTGTTTAGGTCAGAATGG+TGG | + | chr5.2:2599808-2599827 | MS.gene21693:intron | 45.0% | |
GATGAGAGTCAACTGGGATT+TGG | + | chr5.2:2599833-2599852 | MS.gene21693:CDS | 45.0% | |
GATGAGTCTGAGAACTTGAG+AGG | - | chr5.2:2598561-2598580 | None:intergenic | 45.0% | |
GCACACAACGTACACGAAAA+AGG | - | chr5.2:2599260-2599279 | None:intergenic | 45.0% | |
GGTGTTAGAACTCTCAGAAC+AGG | - | chr5.2:2599542-2599561 | None:intergenic | 45.0% | |
GTAACTAACCTGTGTGAGCT+TGG | - | chr5.2:2598379-2598398 | None:intergenic | 45.0% | |
GTGACCAATCGCATAGACTT+TGG | - | chr5.2:2598147-2598166 | None:intergenic | 45.0% | |
TCAAGTTCTCAGACTCATCC+TGG | + | chr5.2:2598562-2598581 | MS.gene21693:intron | 45.0% | |
TCAGAATAAGCACCTTCAGC+AGG | - | chr5.2:2598342-2598361 | None:intergenic | 45.0% | |
TGATTTGAGCCAAGGGTTGA+AGG | - | chr5.2:2599216-2599235 | None:intergenic | 45.0% | |
TGTTTGAGAAGAGCAGGAGA+GGG | - | chr5.2:2598049-2598068 | None:intergenic | 45.0% | |
TTACGTGGGAGAAGGAAATG+AGG | - | chr5.2:2598081-2598100 | None:intergenic | 45.0% | |
TTTGAAGGGGACAGGTTTCT+TGG | + | chr5.2:2599949-2599968 | MS.gene21693:CDS | 45.0% | |
! | AGCAGGGGACCTATTTTCAA+TGG | - | chr5.2:2598325-2598344 | None:intergenic | 45.0% |
! | GAGTTCTAACACCTGCTTTG+AGG | + | chr5.2:2599549-2599568 | MS.gene21693:CDS | 45.0% |
!! | ACATCGCTTGCTGTTATACC+AGG | - | chr5.2:2599686-2599705 | None:intergenic | 45.0% |
!! | CAGGTAAGGGTCTTTTGAAG+GGG | + | chr5.2:2599936-2599955 | MS.gene21693:CDS | 45.0% |
!! | GCTGAAGGTGCTTATTCTGA+GGG | + | chr5.2:2598342-2598361 | MS.gene21693:CDS | 45.0% |
!! | GTGGTTGATGAGAGTCAACT+GGG | + | chr5.2:2599827-2599846 | MS.gene21693:CDS | 45.0% |
!! | TGCTGAAGGTGCTTATTCTG+AGG | + | chr5.2:2598341-2598360 | MS.gene21693:CDS | 45.0% |
AAGAGCAGGAGAGGGATAGA+GGG | - | chr5.2:2598041-2598060 | None:intergenic | 50.0% | |
AAGCGATGTCAATGTGGACG+AGG | + | chr5.2:2599697-2599716 | MS.gene21693:CDS | 50.0% | |
ACGCCCAAAGTCTATGCGAT+TGG | + | chr5.2:2598140-2598159 | MS.gene21693:CDS | 50.0% | |
ATATGATTGCCCACGTGGGT+TGG | + | chr5.2:2598508-2598527 | MS.gene21693:intron | 50.0% | |
CCAAGGGTTGAAGGAGTTAG+AGG | - | chr5.2:2599207-2599226 | None:intergenic | 50.0% | |
CCTCTAACTCCTTCAACCCT+TGG | + | chr5.2:2599204-2599223 | MS.gene21693:intron | 50.0% | |
GAAAATAGGTCCCCTGCTGA+AGG | + | chr5.2:2598327-2598346 | MS.gene21693:CDS | 50.0% | |
GTCGTCCAAAAACTGGGTTC+CGG | + | chr5.2:2598203-2598222 | MS.gene21693:CDS | 50.0% | |
GTGTTTGAGAAGAGCAGGAG+AGG | - | chr5.2:2598050-2598069 | None:intergenic | 50.0% | |
GTTAGAGGACTTGAAGACCG+AGG | - | chr5.2:2599192-2599211 | None:intergenic | 50.0% | |
TAAGGCAAGTCAAGTGTCCG+TGG | + | chr5.2:2598173-2598192 | MS.gene21693:CDS | 50.0% | |
TTTGGACGACTCTTCAGCCA+CGG | - | chr5.2:2598193-2598212 | None:intergenic | 50.0% | |
! | CACAACCGGAACCCAGTTTT+TGG | - | chr5.2:2598211-2598230 | None:intergenic | 50.0% |
! | GCGATTGGTCACAACGTGTA+AGG | + | chr5.2:2598155-2598174 | MS.gene21693:CDS | 50.0% |
!! | AAGGGTCTTTTGAAGGGGAC+AGG | + | chr5.2:2599941-2599960 | MS.gene21693:CDS | 50.0% |
!! | AGCTCAGCTGATTTGAGCCA+AGG | - | chr5.2:2599224-2599243 | None:intergenic | 50.0% |
!! | ATCCTGGTGCCGGTTTATGT+GGG | + | chr5.2:2598578-2598597 | MS.gene21693:intron | 50.0% |
!! | GCTCAGCTGATTTGAGCCAA+GGG | - | chr5.2:2599223-2599242 | None:intergenic | 50.0% |
!! | GGTGGTTGATGAGAGTCAAC+TGG | + | chr5.2:2599826-2599845 | MS.gene21693:CDS | 50.0% |
AAACTGGGTTCCGGTTGTGC+CGG | + | chr5.2:2598212-2598231 | MS.gene21693:CDS | 55.0% | |
GAAGAGCAGGAGAGGGATAG+AGG | - | chr5.2:2598042-2598061 | None:intergenic | 55.0% | |
TAGACTTTGGGCGTGCGTAG+CGG | - | chr5.2:2598134-2598153 | None:intergenic | 55.0% | |
TCTCAGACTCATCCTGGTGC+CGG | + | chr5.2:2598568-2598587 | MS.gene21693:intron | 55.0% | |
TGGCGGGAGAGGAGAAGAAA+AGG | - | chr5.2:2598105-2598124 | None:intergenic | 55.0% | |
!! | CATCCTGGTGCCGGTTTATG+TGG | + | chr5.2:2598577-2598596 | MS.gene21693:intron | 55.0% |
!! | GAGGGATAGAGGGTTGGTAG+CGG | - | chr5.2:2598031-2598050 | None:intergenic | 55.0% |
ACCACCAGACCAACCCACGT+GGG | - | chr5.2:2598520-2598539 | None:intergenic | 60.0% | |
ATGACACGCCTCTCCCCTCT+CGG | - | chr5.2:2598249-2598268 | None:intergenic | 60.0% | |
GCAGGAGAGGGATAGAGGGT+TGG | - | chr5.2:2598037-2598056 | None:intergenic | 60.0% | |
GGACCAATCCAACCGTCCAC+CGG | - | chr5.2:2598604-2598623 | None:intergenic | 60.0% | |
GGTTTATGTGGGCCGGTGGA+CGG | + | chr5.2:2598589-2598608 | MS.gene21693:intron | 60.0% | |
GTCCACCGGCCCACATAAAC+CGG | - | chr5.2:2598590-2598609 | None:intergenic | 60.0% | |
GTGCGTAGCGGTTAGAGTGG+CGG | - | chr5.2:2598122-2598141 | None:intergenic | 60.0% | |
TGCGTAGCGGTTAGAGTGGC+GGG | - | chr5.2:2598121-2598140 | None:intergenic | 60.0% | |
TTTAGCGGGAAGGCTCAGCC+TGG | + | chr5.2:2599665-2599684 | MS.gene21693:CDS | 60.0% | |
!! | ATTGCCCACGTGGGTTGGTC+TGG | + | chr5.2:2598513-2598532 | MS.gene21693:intron | 60.0% |
!! | TGGTGCCGGTTTATGTGGGC+CGG | + | chr5.2:2598582-2598601 | MS.gene21693:intron | 60.0% |
CACCACCAGACCAACCCACG+TGG | - | chr5.2:2598521-2598540 | None:intergenic | 65.0% | |
GGCCCACATAAACCGGCACC+AGG | - | chr5.2:2598583-2598602 | None:intergenic | 65.0% | |
GGCGTGCGTAGCGGTTAGAG+TGG | - | chr5.2:2598125-2598144 | None:intergenic | 65.0% | |
TATGTGGGCCGGTGGACGGT+TGG | + | chr5.2:2598593-2598612 | MS.gene21693:intron | 65.0% | |
! | AGCGGTTAGAGTGGCGGGAG+AGG | - | chr5.2:2598116-2598135 | None:intergenic | 65.0% |
! | GGTTCCGGTTGTGCCGGTGA+CGG | + | chr5.2:2598218-2598237 | MS.gene21693:CDS | 65.0% |
!! | TGCCGGTTTATGTGGGCCGG+TGG | + | chr5.2:2598585-2598604 | MS.gene21693:intron | 65.0% |
AGCGCCGTCACCGGCACAAC+CGG | - | chr5.2:2598225-2598244 | None:intergenic | 70.0% | |
GGGCCGGTGGACGGTTGGAT+TGG | + | chr5.2:2598598-2598617 | MS.gene21693:intron | 70.0% | |
!! | GCCCACGTGGGTTGGTCTGG+TGG | + | chr5.2:2598516-2598535 | MS.gene21693:intron | 70.0% |
CCTCTCGGCAGCGCCGTCAC+CGG | - | chr5.2:2598234-2598253 | None:intergenic | 75.0% | |
! | CGGTGACGGCGCTGCCGAGA+GGG | + | chr5.2:2598232-2598251 | MS.gene21693:CDS | 75.0% |
! | GGTGACGGCGCTGCCGAGAG+GGG | + | chr5.2:2598233-2598252 | MS.gene21693:CDS | 75.0% |
! | CGGCGCTGCCGAGAGGGGAG+AGG | + | chr5.2:2598238-2598257 | MS.gene21693:CDS | 80.0% |
!! | CCGGTGACGGCGCTGCCGAG+AGG | + | chr5.2:2598231-2598250 | MS.gene21693:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 2598024 | 2600006 | 2598024 | ID=MS.gene21693 |
chr5.2 | mRNA | 2598024 | 2600006 | 2598024 | ID=MS.gene21693.t1;Parent=MS.gene21693 |
chr5.2 | exon | 2598024 | 2598389 | 2598024 | ID=MS.gene21693.t1.exon1;Parent=MS.gene21693.t1 |
chr5.2 | CDS | 2598024 | 2598389 | 2598024 | ID=cds.MS.gene21693.t1;Parent=MS.gene21693.t1 |
chr5.2 | exon | 2599458 | 2599718 | 2599458 | ID=MS.gene21693.t1.exon2;Parent=MS.gene21693.t1 |
chr5.2 | CDS | 2599458 | 2599718 | 2599458 | ID=cds.MS.gene21693.t1;Parent=MS.gene21693.t1 |
chr5.2 | exon | 2599818 | 2600006 | 2599818 | ID=MS.gene21693.t1.exon3;Parent=MS.gene21693.t1 |
chr5.2 | CDS | 2599818 | 2600006 | 2599818 | ID=cds.MS.gene21693.t1;Parent=MS.gene21693.t1 |
Gene Sequence |
Protein sequence |