Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88666.t1 | XP_003610141.1 | 97.4 | 269 | 7 | 0 | 1 | 269 | 21 | 289 | 7.40E-156 | 559.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88666.t1 | Q38910 | 73.2 | 261 | 68 | 1 | 5 | 263 | 23 | 283 | 9.0e-118 | 424.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88666.t1 | G7JVH9 | 97.4 | 269 | 7 | 0 | 1 | 269 | 21 | 289 | 5.4e-156 | 559.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene88666 | -0.887835 | 1.01E-72 | -1.69E-46 |
| MS.gene049173 | MS.gene88666 | -0.801985 | 6.95E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene88666 | -0.857792 | 1.28E-62 | -1.69E-46 |
| MS.gene049222 | MS.gene88666 | -0.870431 | 1.47E-66 | -1.69E-46 |
| MS.gene049232 | MS.gene88666 | -0.82896 | 6.72E-55 | -1.69E-46 |
| MS.gene049281 | MS.gene88666 | 0.856322 | 3.48E-62 | -1.69E-46 |
| MS.gene049285 | MS.gene88666 | -0.874644 | 5.75E-68 | -1.69E-46 |
| MS.gene049320 | MS.gene88666 | -0.862326 | 5.49E-64 | -1.69E-46 |
| MS.gene049609 | MS.gene88666 | -0.81002 | 1.42E-50 | -1.69E-46 |
| MS.gene049611 | MS.gene88666 | 0.823466 | 1.36E-53 | -1.69E-46 |
| MS.gene049627 | MS.gene88666 | -0.828089 | 1.09E-54 | -1.69E-46 |
| MS.gene049633 | MS.gene88666 | -0.859461 | 4.07E-63 | -1.69E-46 |
| MS.gene049634 | MS.gene88666 | 0.80879 | 2.60E-50 | -1.69E-46 |
| MS.gene049865 | MS.gene88666 | -0.823691 | 1.21E-53 | -1.69E-46 |
| MS.gene050082 | MS.gene88666 | 0.833736 | 4.49E-56 | -1.69E-46 |
| MS.gene05010 | MS.gene88666 | -0.832091 | 1.15E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene88666 | -0.870619 | 1.27E-66 | -1.69E-46 |
| MS.gene050165 | MS.gene88666 | -0.883863 | 3.13E-71 | -1.69E-46 |
| MS.gene050170 | MS.gene88666 | -0.85505 | 8.18E-62 | -1.69E-46 |
| MS.gene050216 | MS.gene88666 | -0.804168 | 2.46E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene88666 | -0.842164 | 3.06E-58 | -1.69E-46 |
| MS.gene050333 | MS.gene88666 | -0.864457 | 1.20E-64 | -1.69E-46 |
| MS.gene050381 | MS.gene88666 | 0.829292 | 5.59E-55 | -1.69E-46 |
| MS.gene050444 | MS.gene88666 | -0.829643 | 4.59E-55 | -1.69E-46 |
| MS.gene050496 | MS.gene88666 | -0.854319 | 1.33E-61 | -1.69E-46 |
| MS.gene050504 | MS.gene88666 | -0.894001 | 3.72E-75 | -1.69E-46 |
| MS.gene050518 | MS.gene88666 | -0.869399 | 3.19E-66 | -1.69E-46 |
| MS.gene050577 | MS.gene88666 | -0.86838 | 6.82E-66 | -1.69E-46 |
| MS.gene050612 | MS.gene88666 | -0.888039 | 8.40E-73 | -1.69E-46 |
| MS.gene050675 | MS.gene88666 | -0.867797 | 1.05E-65 | -1.69E-46 |
| MS.gene050699 | MS.gene88666 | -0.855624 | 5.57E-62 | -1.69E-46 |
| MS.gene050747 | MS.gene88666 | -0.807381 | 5.20E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene88666 | -0.835586 | 1.54E-56 | -1.69E-46 |
| MS.gene05079 | MS.gene88666 | 0.808349 | 3.23E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene88666 | -0.830366 | 3.06E-55 | -1.69E-46 |
| MS.gene050832 | MS.gene88666 | 0.807707 | 4.43E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene88666 | -0.862367 | 5.33E-64 | -1.69E-46 |
| MS.gene050871 | MS.gene88666 | -0.857012 | 2.18E-62 | -1.69E-46 |
| MS.gene050876 | MS.gene88666 | -0.855696 | 5.31E-62 | -1.69E-46 |
| MS.gene05087 | MS.gene88666 | -0.806284 | 8.87E-50 | -1.69E-46 |
| MS.gene050883 | MS.gene88666 | 0.803663 | 3.13E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene88666 | -0.893466 | 6.12E-75 | -1.69E-46 |
| MS.gene050950 | MS.gene88666 | -0.806579 | 7.68E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene88666 | -0.855731 | 5.18E-62 | -1.69E-46 |
| MS.gene05100 | MS.gene88666 | -0.822766 | 1.99E-53 | -1.69E-46 |
| MS.gene051044 | MS.gene88666 | 0.803716 | 3.05E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene88666 | 0.821307 | 4.33E-53 | -1.69E-46 |
| MS.gene051127 | MS.gene88666 | 0.826712 | 2.33E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene88666 | 0.861753 | 8.22E-64 | -1.69E-46 |
| MS.gene051268 | MS.gene88666 | -0.84157 | 4.38E-58 | -1.69E-46 |
| MS.gene051317 | MS.gene88666 | -0.86555 | 5.44E-65 | -1.69E-46 |
| MS.gene051364 | MS.gene88666 | 0.865067 | 7.72E-65 | -1.69E-46 |
| MS.gene051366 | MS.gene88666 | 0.851991 | 6.19E-61 | -1.69E-46 |
| MS.gene051367 | MS.gene88666 | 0.842025 | 3.33E-58 | -1.69E-46 |
| MS.gene051422 | MS.gene88666 | 0.809152 | 2.18E-50 | -1.69E-46 |
| MS.gene051651 | MS.gene88666 | 0.827312 | 1.68E-54 | -1.69E-46 |
| MS.gene051694 | MS.gene88666 | -0.818945 | 1.50E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene88666 | -0.839912 | 1.19E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene88666 | -0.837324 | 5.56E-57 | -1.69E-46 |
| MS.gene051874 | MS.gene88666 | -0.806004 | 1.02E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene88666 | 0.83345 | 5.29E-56 | -1.69E-46 |
| MS.gene051949 | MS.gene88666 | -0.825269 | 5.14E-54 | -1.69E-46 |
| MS.gene051973 | MS.gene88666 | 0.803182 | 3.94E-49 | -1.69E-46 |
| MS.gene052129 | MS.gene88666 | 0.813088 | 3.06E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene88666 | -0.84651 | 2.08E-59 | -1.69E-46 |
| MS.gene052482 | MS.gene88666 | -0.875746 | 2.42E-68 | -1.69E-46 |
| MS.gene052486 | MS.gene88666 | -0.884708 | 1.52E-71 | -1.69E-46 |
| MS.gene052503 | MS.gene88666 | -0.810066 | 1.39E-50 | -1.69E-46 |
| MS.gene052606 | MS.gene88666 | 0.814283 | 1.67E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene88666 | -0.806242 | 9.05E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene88666 | -0.811495 | 6.80E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene88666 | -0.810407 | 1.17E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene88666 | -0.811085 | 8.35E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene88666 | -0.838639 | 2.55E-57 | -1.69E-46 |
| MS.gene053083 | MS.gene88666 | 0.809814 | 1.57E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene88666 | -0.836888 | 7.18E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene88666 | -0.823481 | 1.35E-53 | -1.69E-46 |
| MS.gene053218 | MS.gene88666 | 0.825584 | 4.33E-54 | -1.69E-46 |
| MS.gene053284 | MS.gene88666 | -0.814474 | 1.51E-51 | -1.69E-46 |
| MS.gene053285 | MS.gene88666 | -0.800139 | 1.66E-48 | -1.69E-46 |
| MS.gene053286 | MS.gene88666 | -0.824443 | 8.05E-54 | -1.69E-46 |
| MS.gene053420 | MS.gene88666 | 0.876078 | 1.86E-68 | -1.69E-46 |
| MS.gene053421 | MS.gene88666 | 0.820315 | 7.32E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene88666 | -0.837921 | 3.91E-57 | -1.69E-46 |
| MS.gene053480 | MS.gene88666 | -0.806988 | 6.30E-50 | -1.69E-46 |
| MS.gene053549 | MS.gene88666 | 0.802518 | 5.40E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene88666 | 0.804974 | 1.67E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene88666 | -0.814434 | 1.54E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene88666 | -0.81579 | 7.72E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene88666 | -0.84068 | 7.51E-58 | -1.69E-46 |
| MS.gene054595 | MS.gene88666 | -0.81987 | 9.26E-53 | -1.69E-46 |
| MS.gene054600 | MS.gene88666 | -0.824203 | 9.17E-54 | -1.69E-46 |
| MS.gene054616 | MS.gene88666 | 0.831685 | 1.45E-55 | -1.69E-46 |
| MS.gene054642 | MS.gene88666 | -0.857633 | 1.43E-62 | -1.69E-46 |
| MS.gene054706 | MS.gene88666 | 0.824921 | 6.21E-54 | -1.69E-46 |
| MS.gene05470 | MS.gene88666 | -0.879234 | 1.47E-69 | -1.69E-46 |
| MS.gene054954 | MS.gene88666 | -0.879207 | 1.50E-69 | -1.69E-46 |
| MS.gene054959 | MS.gene88666 | 0.850136 | 2.06E-60 | -1.69E-46 |
| MS.gene055154 | MS.gene88666 | 0.849491 | 3.13E-60 | -1.69E-46 |
| MS.gene055202 | MS.gene88666 | 0.840265 | 9.65E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene88666 | -0.814567 | 1.44E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene88666 | -0.869909 | 2.17E-66 | -1.69E-46 |
| MS.gene055502 | MS.gene88666 | -0.887449 | 1.41E-72 | -1.69E-46 |
| MS.gene055577 | MS.gene88666 | -0.882669 | 8.58E-71 | -1.69E-46 |
| MS.gene055638 | MS.gene88666 | -0.802523 | 5.39E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene88666 | -0.86428 | 1.36E-64 | -1.69E-46 |
| MS.gene055750 | MS.gene88666 | -0.840798 | 7.00E-58 | -1.69E-46 |
| MS.gene055751 | MS.gene88666 | -0.874816 | 5.02E-68 | -1.69E-46 |
| MS.gene055776 | MS.gene88666 | -0.814969 | 1.17E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene88666 | -0.879852 | 8.88E-70 | -1.69E-46 |
| MS.gene055941 | MS.gene88666 | -0.833758 | 4.44E-56 | -1.69E-46 |
| MS.gene055942 | MS.gene88666 | 0.80144 | 9.00E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene88666 | 0.811409 | 7.10E-51 | -1.69E-46 |
| MS.gene056311 | MS.gene88666 | 0.801036 | 1.09E-48 | -1.69E-46 |
| MS.gene056374 | MS.gene88666 | -0.805162 | 1.53E-49 | -1.69E-46 |
| MS.gene056409 | MS.gene88666 | -0.806906 | 6.55E-50 | -1.69E-46 |
| MS.gene056450 | MS.gene88666 | -0.810484 | 1.13E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene88666 | -0.878156 | 3.53E-69 | -1.69E-46 |
| MS.gene056510 | MS.gene88666 | -0.856666 | 2.76E-62 | -1.69E-46 |
| MS.gene056549 | MS.gene88666 | -0.82923 | 5.78E-55 | -1.69E-46 |
| MS.gene056550 | MS.gene88666 | 0.844483 | 7.35E-59 | -1.69E-46 |
| MS.gene056610 | MS.gene88666 | -0.811317 | 7.44E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene88666 | -0.855224 | 7.28E-62 | -1.69E-46 |
| MS.gene056692 | MS.gene88666 | -0.880318 | 6.06E-70 | -1.69E-46 |
| MS.gene056694 | MS.gene88666 | 0.81008 | 1.38E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene88666 | 0.868302 | 7.22E-66 | -1.69E-46 |
| MS.gene056857 | MS.gene88666 | 0.800621 | 1.32E-48 | -1.69E-46 |
| MS.gene056946 | MS.gene88666 | -0.812894 | 3.37E-51 | -1.69E-46 |
| MS.gene057014 | MS.gene88666 | 0.841882 | 3.63E-58 | -1.69E-46 |
| MS.gene057416 | MS.gene88666 | -0.802554 | 5.31E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene88666 | -0.8307 | 2.53E-55 | -1.69E-46 |
| MS.gene057768 | MS.gene88666 | 0.814911 | 1.21E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene88666 | -0.86116 | 1.25E-63 | -1.69E-46 |
| MS.gene057857 | MS.gene88666 | -0.804152 | 2.48E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene88666 | -0.800333 | 1.51E-48 | -1.69E-46 |
| MS.gene058068 | MS.gene88666 | 0.831981 | 1.23E-55 | -1.69E-46 |
| MS.gene058111 | MS.gene88666 | 0.819428 | 1.17E-52 | -1.69E-46 |
| MS.gene058117 | MS.gene88666 | 0.804507 | 2.09E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene88666 | -0.813927 | 2.00E-51 | -1.69E-46 |
| MS.gene058171 | MS.gene88666 | 0.821251 | 4.46E-53 | -1.69E-46 |
| MS.gene058173 | MS.gene88666 | 0.805851 | 1.09E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene88666 | 0.82326 | 1.52E-53 | -1.69E-46 |
| MS.gene058268 | MS.gene88666 | 0.834051 | 3.75E-56 | -1.69E-46 |
| MS.gene058269 | MS.gene88666 | 0.829524 | 4.91E-55 | -1.69E-46 |
| MS.gene058334 | MS.gene88666 | 0.856947 | 2.28E-62 | -1.69E-46 |
| MS.gene058335 | MS.gene88666 | -0.820303 | 7.37E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene88666 | -0.814345 | 1.62E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene88666 | -0.856776 | 2.56E-62 | -1.69E-46 |
| MS.gene058419 | MS.gene88666 | -0.879058 | 1.70E-69 | -1.69E-46 |
| MS.gene058544 | MS.gene88666 | -0.851303 | 9.69E-61 | -1.69E-46 |
| MS.gene058603 | MS.gene88666 | 0.825265 | 5.15E-54 | -1.69E-46 |
| MS.gene058719 | MS.gene88666 | -0.808246 | 3.40E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene88666 | -0.815405 | 9.40E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene88666 | -0.875689 | 2.53E-68 | -1.69E-46 |
| MS.gene058838 | MS.gene88666 | -0.844911 | 5.64E-59 | -1.69E-46 |
| MS.gene058978 | MS.gene88666 | 0.801137 | 1.04E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene88666 | -0.887477 | 1.38E-72 | -1.69E-46 |
| MS.gene059023 | MS.gene88666 | -0.885552 | 7.37E-72 | -1.69E-46 |
| MS.gene059029 | MS.gene88666 | -0.812984 | 3.22E-51 | -1.69E-46 |
| MS.gene059079 | MS.gene88666 | -0.824093 | 9.73E-54 | -1.69E-46 |
| MS.gene059102 | MS.gene88666 | 0.801274 | 9.73E-49 | -1.69E-46 |
| MS.gene05912 | MS.gene88666 | -0.882074 | 1.41E-70 | -1.69E-46 |
| MS.gene05913 | MS.gene88666 | -0.808354 | 3.23E-50 | -1.69E-46 |
| MS.gene05914 | MS.gene88666 | -0.824094 | 9.72E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene88666 | -0.806276 | 8.90E-50 | -1.69E-46 |
| MS.gene059479 | MS.gene88666 | 0.833334 | 5.66E-56 | -1.69E-46 |
| MS.gene059526 | MS.gene88666 | 0.818378 | 2.02E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene88666 | -0.891971 | 2.44E-74 | -1.69E-46 |
| MS.gene059703 | MS.gene88666 | 0.800255 | 1.57E-48 | -1.69E-46 |
| MS.gene059718 | MS.gene88666 | -0.85858 | 7.47E-63 | -1.69E-46 |
| MS.gene059756 | MS.gene88666 | -0.849551 | 3.01E-60 | -1.69E-46 |
| MS.gene059801 | MS.gene88666 | -0.831653 | 1.48E-55 | -1.69E-46 |
| MS.gene059837 | MS.gene88666 | -0.817057 | 4.02E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene88666 | -0.875029 | 4.25E-68 | -1.69E-46 |
| MS.gene059902 | MS.gene88666 | -0.836652 | 8.25E-57 | -1.69E-46 |
| MS.gene059916 | MS.gene88666 | 0.808867 | 2.51E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene88666 | -0.845383 | 4.20E-59 | -1.69E-46 |
| MS.gene060096 | MS.gene88666 | 0.814752 | 1.31E-51 | -1.69E-46 |
| MS.gene060337 | MS.gene88666 | 0.803678 | 3.11E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene88666 | 0.860614 | 1.83E-63 | -1.69E-46 |
| MS.gene060703 | MS.gene88666 | -0.872185 | 3.86E-67 | -1.69E-46 |
| MS.gene060762 | MS.gene88666 | -0.905477 | 4.12E-80 | -1.69E-46 |
| MS.gene060778 | MS.gene88666 | -0.830235 | 3.29E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene88666 | -0.902082 | 1.39E-78 | -1.69E-46 |
| MS.gene060823 | MS.gene88666 | 0.850887 | 1.27E-60 | -1.69E-46 |
| MS.gene06092 | MS.gene88666 | -0.814159 | 1.78E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene88666 | -0.87909 | 1.65E-69 | -1.69E-46 |
| MS.gene061044 | MS.gene88666 | 0.839097 | 1.94E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene88666 | -0.852991 | 3.21E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88666.t1 | MTR_4g128400 | 97.398 | 269 | 7 | 0 | 1 | 269 | 21 | 289 | 0.0 | 547 |
| MS.gene88666.t1 | MTR_4g128410 | 76.894 | 264 | 61 | 0 | 2 | 265 | 19 | 282 | 3.10e-160 | 446 |
| MS.gene88666.t1 | MTR_7g093530 | 77.273 | 264 | 60 | 0 | 2 | 265 | 18 | 281 | 1.47e-154 | 432 |
| MS.gene88666.t1 | MTR_4g128580 | 74.627 | 268 | 64 | 1 | 1 | 264 | 19 | 286 | 2.08e-149 | 419 |
| MS.gene88666.t1 | MTR_4g128570 | 72.797 | 261 | 57 | 1 | 5 | 265 | 28 | 274 | 9.76e-146 | 409 |
| MS.gene88666.t1 | MTR_4g126920 | 71.756 | 262 | 73 | 1 | 5 | 265 | 22 | 283 | 2.49e-139 | 393 |
| MS.gene88666.t1 | MTR_8g081040 | 67.170 | 265 | 81 | 2 | 1 | 264 | 23 | 282 | 2.23e-133 | 378 |
| MS.gene88666.t1 | MTR_2g038860 | 65.672 | 268 | 87 | 1 | 1 | 263 | 19 | 286 | 5.31e-133 | 378 |
| MS.gene88666.t1 | MTR_2g038705 | 65.672 | 268 | 87 | 1 | 1 | 263 | 19 | 286 | 5.31e-133 | 378 |
| MS.gene88666.t1 | MTR_4g128590 | 67.658 | 269 | 65 | 3 | 1 | 263 | 23 | 275 | 4.25e-130 | 370 |
| MS.gene88666.t1 | MTR_3g084620 | 67.954 | 259 | 77 | 1 | 5 | 263 | 25 | 277 | 2.31e-129 | 368 |
| MS.gene88666.t1 | MTR_3g084630 | 67.954 | 259 | 77 | 1 | 5 | 263 | 25 | 277 | 2.42e-129 | 368 |
| MS.gene88666.t1 | MTR_8g102220 | 61.004 | 259 | 83 | 2 | 5 | 263 | 26 | 266 | 1.19e-115 | 333 |
| MS.gene88666.t1 | MTR_8g102910 | 53.358 | 268 | 117 | 4 | 1 | 263 | 15 | 279 | 6.43e-101 | 296 |
| MS.gene88666.t1 | MTR_6g088320 | 54.478 | 268 | 114 | 4 | 1 | 263 | 19 | 283 | 6.88e-101 | 296 |
| MS.gene88666.t1 | MTR_5g091730 | 50.000 | 266 | 128 | 1 | 2 | 267 | 22 | 282 | 2.21e-96 | 285 |
| MS.gene88666.t1 | MTR_6g033085 | 54.941 | 253 | 108 | 3 | 15 | 264 | 39 | 288 | 1.02e-95 | 283 |
| MS.gene88666.t1 | MTR_6g033055 | 54.150 | 253 | 110 | 3 | 15 | 264 | 39 | 288 | 3.10e-95 | 282 |
| MS.gene88666.t1 | MTR_4g097640 | 51.163 | 258 | 118 | 5 | 10 | 263 | 34 | 287 | 6.15e-94 | 278 |
| MS.gene88666.t1 | MTR_4g097670 | 51.163 | 258 | 118 | 5 | 10 | 263 | 34 | 287 | 6.15e-94 | 278 |
| MS.gene88666.t1 | MTR_4g097700 | 51.163 | 258 | 118 | 5 | 10 | 263 | 71 | 324 | 8.67e-94 | 280 |
| MS.gene88666.t1 | MTR_3g089540 | 49.808 | 261 | 128 | 1 | 3 | 263 | 25 | 282 | 9.38e-93 | 275 |
| MS.gene88666.t1 | MTR_7g084750 | 53.600 | 250 | 114 | 2 | 15 | 263 | 39 | 287 | 1.64e-92 | 275 |
| MS.gene88666.t1 | MTR_7g084770 | 51.128 | 266 | 118 | 4 | 2 | 263 | 30 | 287 | 1.71e-92 | 275 |
| MS.gene88666.t1 | MTR_7g084760 | 51.128 | 266 | 118 | 4 | 2 | 263 | 30 | 287 | 3.79e-92 | 274 |
| MS.gene88666.t1 | MTR_2g089140 | 50.996 | 251 | 113 | 3 | 23 | 264 | 38 | 287 | 5.72e-91 | 271 |
| MS.gene88666.t1 | MTR_1g105900 | 48.120 | 266 | 136 | 1 | 2 | 265 | 28 | 293 | 6.23e-91 | 271 |
| MS.gene88666.t1 | MTR_4g045853 | 49.805 | 257 | 119 | 3 | 22 | 269 | 39 | 294 | 3.08e-89 | 267 |
| MS.gene88666.t1 | MTR_1g105495 | 45.896 | 268 | 133 | 4 | 6 | 265 | 33 | 296 | 2.43e-81 | 247 |
| MS.gene88666.t1 | MTR_2g089140 | 50.667 | 225 | 101 | 3 | 49 | 264 | 1 | 224 | 3.77e-81 | 244 |
| MS.gene88666.t1 | MTR_8g013055 | 47.451 | 255 | 131 | 3 | 10 | 263 | 33 | 285 | 2.64e-77 | 236 |
| MS.gene88666.t1 | MTR_7g056090 | 41.699 | 259 | 141 | 6 | 10 | 266 | 34 | 284 | 1.51e-60 | 193 |
| MS.gene88666.t1 | MTR_4g057450 | 42.975 | 242 | 123 | 6 | 30 | 263 | 70 | 304 | 3.03e-60 | 193 |
| MS.gene88666.t1 | MTR_7g102260 | 40.226 | 266 | 142 | 7 | 7 | 264 | 36 | 292 | 1.30e-59 | 191 |
| MS.gene88666.t1 | MTR_1g063020 | 39.700 | 267 | 140 | 8 | 7 | 263 | 39 | 294 | 1.51e-58 | 188 |
| MS.gene88666.t1 | MTR_2g095800 | 39.130 | 253 | 139 | 6 | 10 | 254 | 56 | 301 | 2.83e-56 | 183 |
| MS.gene88666.t1 | MTR_2g049130 | 41.016 | 256 | 140 | 6 | 10 | 263 | 31 | 277 | 3.25e-56 | 182 |
| MS.gene88666.t1 | MTR_8g064180 | 38.462 | 260 | 147 | 7 | 15 | 263 | 53 | 310 | 3.59e-55 | 180 |
| MS.gene88666.t1 | MTR_1g033420 | 39.163 | 263 | 143 | 8 | 16 | 268 | 41 | 296 | 2.49e-54 | 179 |
| MS.gene88666.t1 | MTR_2g049030 | 38.400 | 250 | 144 | 7 | 16 | 261 | 38 | 281 | 5.54e-53 | 174 |
| MS.gene88666.t1 | MTR_5g029100 | 37.879 | 264 | 150 | 6 | 13 | 265 | 47 | 307 | 1.14e-50 | 170 |
| MS.gene88666.t1 | MTR_5g029100 | 36.614 | 254 | 147 | 6 | 23 | 265 | 26 | 276 | 2.44e-46 | 157 |
| MS.gene88666.t1 | MTR_8g090100 | 34.848 | 264 | 157 | 9 | 16 | 269 | 29 | 287 | 9.77e-44 | 151 |
| MS.gene88666.t1 | MTR_8g479340 | 42.574 | 101 | 49 | 3 | 170 | 265 | 41 | 137 | 2.91e-21 | 87.4 |
| MS.gene88666.t1 | MTR_8g032640 | 34.302 | 172 | 105 | 5 | 30 | 199 | 33 | 198 | 1.63e-16 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88666.t1 | AT4G25810 | 72.075 | 265 | 72 | 1 | 1 | 263 | 19 | 283 | 9.51e-149 | 417 |
| MS.gene88666.t1 | AT5G57560 | 69.318 | 264 | 78 | 1 | 3 | 263 | 18 | 281 | 4.02e-144 | 405 |
| MS.gene88666.t1 | AT5G57550 | 70.881 | 261 | 73 | 1 | 3 | 263 | 25 | 282 | 1.04e-143 | 404 |
| MS.gene88666.t1 | AT4G30270 | 68.441 | 263 | 69 | 2 | 5 | 267 | 21 | 269 | 2.98e-137 | 387 |
| MS.gene88666.t1 | AT2G18800 | 65.248 | 282 | 85 | 4 | 1 | 269 | 21 | 302 | 8.00e-136 | 385 |
| MS.gene88666.t1 | AT5G48070 | 65.779 | 263 | 85 | 2 | 3 | 264 | 24 | 282 | 6.70e-134 | 380 |
| MS.gene88666.t1 | AT4G30280 | 65.660 | 265 | 86 | 2 | 1 | 264 | 22 | 282 | 1.86e-128 | 366 |
| MS.gene88666.t1 | AT5G57530 | 63.462 | 260 | 95 | 0 | 6 | 265 | 25 | 284 | 8.64e-128 | 364 |
| MS.gene88666.t1 | AT3G23730 | 61.654 | 266 | 98 | 1 | 2 | 263 | 21 | 286 | 1.30e-127 | 364 |
| MS.gene88666.t1 | AT4G14130 | 62.595 | 262 | 97 | 1 | 3 | 263 | 23 | 284 | 1.75e-126 | 361 |
| MS.gene88666.t1 | AT5G57540 | 61.303 | 261 | 101 | 0 | 5 | 265 | 23 | 283 | 1.94e-125 | 358 |
| MS.gene88666.t1 | AT1G65310 | 64.639 | 263 | 88 | 2 | 3 | 264 | 46 | 304 | 2.61e-125 | 358 |
| MS.gene88666.t1 | AT1G65310 | 64.639 | 263 | 88 | 2 | 3 | 264 | 24 | 282 | 2.90e-125 | 358 |
| MS.gene88666.t1 | AT4G30290 | 64.151 | 265 | 90 | 2 | 1 | 264 | 17 | 277 | 9.46e-125 | 356 |
| MS.gene88666.t1 | AT4G25820 | 60.755 | 265 | 104 | 0 | 1 | 265 | 23 | 287 | 6.83e-122 | 349 |
| MS.gene88666.t1 | AT5G13870 | 53.755 | 253 | 109 | 3 | 15 | 263 | 39 | 287 | 4.14e-92 | 274 |
| MS.gene88666.t1 | AT5G13870 | 53.755 | 253 | 109 | 3 | 15 | 263 | 39 | 287 | 4.14e-92 | 274 |
| MS.gene88666.t1 | AT5G13870 | 53.755 | 253 | 109 | 3 | 15 | 263 | 39 | 287 | 4.14e-92 | 274 |
| MS.gene88666.t1 | AT5G65730 | 48.302 | 265 | 129 | 5 | 3 | 263 | 30 | 290 | 4.67e-92 | 274 |
| MS.gene88666.t1 | AT4G03210 | 53.498 | 243 | 109 | 2 | 24 | 263 | 43 | 284 | 1.97e-91 | 272 |
| MS.gene88666.t1 | AT4G28850 | 49.225 | 258 | 124 | 3 | 14 | 266 | 35 | 290 | 1.10e-90 | 270 |
| MS.gene88666.t1 | AT4G37800 | 50.193 | 259 | 121 | 5 | 11 | 265 | 37 | 291 | 3.42e-90 | 269 |
| MS.gene88666.t1 | AT2G06850 | 51.779 | 253 | 114 | 3 | 15 | 263 | 42 | 290 | 4.03e-88 | 264 |
| MS.gene88666.t1 | AT4G03210 | 53.165 | 237 | 104 | 3 | 30 | 263 | 24 | 256 | 5.16e-87 | 260 |
| MS.gene88666.t1 | AT2G14620 | 47.191 | 267 | 137 | 3 | 2 | 265 | 31 | 296 | 1.26e-84 | 255 |
| MS.gene88666.t1 | AT2G06850 | 53.043 | 230 | 100 | 3 | 38 | 263 | 5 | 230 | 1.13e-83 | 251 |
| MS.gene88666.t1 | AT1G11545 | 47.191 | 267 | 123 | 6 | 11 | 265 | 41 | 301 | 1.33e-82 | 250 |
| MS.gene88666.t1 | AT4G13090 | 48.221 | 253 | 126 | 3 | 14 | 263 | 38 | 288 | 6.17e-79 | 240 |
| MS.gene88666.t1 | AT2G14620 | 49.565 | 230 | 112 | 3 | 39 | 265 | 18 | 246 | 2.51e-77 | 235 |
| MS.gene88666.t1 | AT2G14620 | 50.000 | 224 | 108 | 3 | 45 | 265 | 13 | 235 | 1.48e-75 | 230 |
| MS.gene88666.t1 | AT3G25050 | 45.525 | 257 | 133 | 4 | 10 | 263 | 37 | 289 | 2.73e-75 | 231 |
| MS.gene88666.t1 | AT4G13080 | 46.800 | 250 | 130 | 3 | 14 | 263 | 45 | 291 | 2.32e-74 | 229 |
| MS.gene88666.t1 | AT2G36870 | 40.755 | 265 | 140 | 6 | 7 | 263 | 42 | 297 | 6.19e-60 | 192 |
| MS.gene88666.t1 | AT1G14720 | 39.147 | 258 | 145 | 7 | 16 | 265 | 39 | 292 | 4.04e-56 | 183 |
| MS.gene88666.t1 | AT3G44990 | 41.152 | 243 | 128 | 7 | 29 | 263 | 58 | 293 | 2.13e-54 | 177 |
| MS.gene88666.t1 | AT1G32170 | 37.594 | 266 | 152 | 7 | 10 | 265 | 34 | 295 | 3.08e-54 | 179 |
| MS.gene88666.t1 | AT1G10550 | 37.548 | 261 | 144 | 7 | 19 | 263 | 52 | 309 | 4.29e-53 | 175 |
| MS.gene88666.t1 | AT2G01850 | 36.822 | 258 | 151 | 7 | 16 | 265 | 39 | 292 | 3.71e-52 | 173 |
| MS.gene88666.t1 | AT3G48580 | 37.879 | 264 | 142 | 9 | 1 | 263 | 31 | 273 | 3.68e-48 | 161 |
| MS.gene88666.t1 | AT4G18990 | 34.173 | 278 | 160 | 7 | 10 | 267 | 42 | 316 | 6.60e-46 | 157 |
| MS.gene88666.t1 | AT3G48580 | 38.326 | 227 | 123 | 7 | 38 | 263 | 4 | 214 | 1.45e-42 | 145 |
| MS.gene88666.t1 | AT4G18990 | 35.468 | 203 | 113 | 5 | 81 | 267 | 42 | 242 | 2.34e-37 | 133 |
| MS.gene88666.t1 | AT3G48580 | 32.576 | 264 | 136 | 10 | 1 | 263 | 31 | 253 | 1.28e-30 | 115 |
| MS.gene88666.t1 | AT2G36870 | 43.885 | 139 | 68 | 3 | 7 | 137 | 42 | 178 | 6.97e-30 | 111 |
Find 67 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAATAATCAATATCTTTA+TGG | 0.128432 | 8.1:+4431010 | MS.gene88666:CDS |
| GAGAACAACAATTCTATTTA+TGG | 0.140855 | 8.1:+4431305 | MS.gene88666:CDS |
| AATCTCATTGGCTGCTTCTT+TGG | 0.175421 | 8.1:-4432076 | None:intergenic |
| TCCATAAAGATATTGATTAT+TGG | 0.219272 | 8.1:-4431011 | None:intergenic |
| ATTGGCTGCTTCTTTGGATA+TGG | 0.238008 | 8.1:-4432070 | None:intergenic |
| TGAAATAGACTTTGAATTCT+TGG | 0.240382 | 8.1:+4431219 | MS.gene88666:CDS |
| GACCCTGAGGGAATCGTTTA+AGG | 0.250841 | 8.1:-4432354 | None:intergenic |
| TATTGATGGCAGACCAATTA+GGG | 0.305687 | 8.1:+4432018 | MS.gene88666:CDS |
| AAGTTCTTGAATTCCCTAAT+TGG | 0.320227 | 8.1:-4432031 | None:intergenic |
| TTCCTAAAAGAAGCAGTAAA+TGG | 0.325310 | 8.1:-4432172 | None:intergenic |
| CTATTGATGGCAGACCAATT+AGG | 0.330217 | 8.1:+4432017 | MS.gene88666:CDS |
| CAAATCAGAAAAGGCTCAAA+TGG | 0.340400 | 8.1:+4432293 | MS.gene88666:CDS |
| ATGCAAATTAAACTTGTTCC+TGG | 0.361969 | 8.1:+4431043 | MS.gene88666:CDS |
| GAAATAGACTTTGAATTCTT+GGG | 0.378927 | 8.1:+4431220 | MS.gene88666:CDS |
| ATTCCCTCAGGGTCTCCCTT+TGG | 0.410581 | 8.1:+4432363 | MS.gene88666:CDS |
| ACTCTTCTTCTGACAATGCT+TGG | 0.416402 | 8.1:+4432248 | MS.gene88666:CDS |
| GTTCTCTGTCCCCTTTGCCT+AGG | 0.418397 | 8.1:-4431288 | None:intergenic |
| TTCTCTGTCCCCTTTGCCTA+GGG | 0.435604 | 8.1:-4431287 | None:intergenic |
| GTCTGTGGAATGCTGATGAT+TGG | 0.441709 | 8.1:+4432107 | MS.gene88666:CDS |
| CTAGACAGAACCTCTGGCTC+TGG | 0.460483 | 8.1:+4430980 | MS.gene88666:CDS |
| ATGTGTACACCCTAGGCAAA+GGG | 0.461356 | 8.1:+4431278 | MS.gene88666:CDS |
| TAGGTATGAAAATCTGTAGT+TGG | 0.461780 | 8.1:-4431334 | None:intergenic |
| TCCTCTTAATTCTCATGACT+TGG | 0.468978 | 8.1:-4432401 | None:intergenic |
| AATTAGGGAATTCAAGAACT+TGG | 0.476768 | 8.1:+4432033 | MS.gene88666:CDS |
| GAAACTTACACAACATGTGC+AGG | 0.480987 | 8.1:-4431373 | None:intergenic |
| AGACTTGAATATAATCTCAT+TGG | 0.482257 | 8.1:-4432088 | None:intergenic |
| ATTGGACAAAACACAACCAT+TGG | 0.488431 | 8.1:-4432203 | None:intergenic |
| CTTGTTCCTGGAAATTCAGC+TGG | 0.496538 | 8.1:+4431055 | MS.gene88666:CDS |
| ATCAAGATGTTAGTATCACT+TGG | 0.496547 | 8.1:+4430906 | MS.gene88666:CDS |
| TAGATTCTACAAATCAGAAA+AGG | 0.498615 | 8.1:+4432284 | MS.gene88666:CDS |
| TGACCTTAAACGATTCCCTC+AGG | 0.499561 | 8.1:+4432351 | MS.gene88666:CDS |
| TTTGCAAGAAGAAATTCCAT+TGG | 0.499781 | 8.1:-4432221 | None:intergenic |
| ACATTGGTATGAACTATGTA+AGG | 0.504779 | 8.1:-4431259 | None:intergenic |
| ACCGTGCCAGCTGAATTTCC+AGG | 0.514387 | 8.1:-4431061 | None:intergenic |
| TTTAGGAACTTCAAAGCCAA+TGG | 0.515491 | 8.1:+4432187 | MS.gene88666:CDS |
| AGCATTGTCAGAAGAAGAGT+TGG | 0.525258 | 8.1:-4432245 | None:intergenic |
| AGGATTCCAGAGAAAAGAAT+AGG | 0.527569 | 8.1:-4431353 | None:intergenic |
| TCAAGATGTTAGTATCACTT+GGG | 0.531310 | 8.1:+4430907 | MS.gene88666:CDS |
| ACGTTCAGAAGGGTCATTGT+GGG | 0.534482 | 8.1:+4431195 | MS.gene88666:CDS |
| AAATCAGAAAAGGCTCAAAT+GGG | 0.537276 | 8.1:+4432294 | MS.gene88666:CDS |
| TTAATTCTCATGACTTGGTA+CGG | 0.539231 | 8.1:-4432396 | None:intergenic |
| TCTGTGGAATGCTGATGATT+GGG | 0.547719 | 8.1:+4432108 | MS.gene88666:CDS |
| TCCTGGAAATTCAGCTGGCA+CGG | 0.548180 | 8.1:+4431060 | MS.gene88666:CDS |
| CTGTCTCTAGACAGAACCTC+TGG | 0.548223 | 8.1:+4430974 | MS.gene88666:CDS |
| GCATTGCAGTTACGTTCAGA+AGG | 0.549452 | 8.1:+4431184 | MS.gene88666:intron |
| TTTGCCTAGGGTGTACACAT+TGG | 0.559431 | 8.1:-4431275 | None:intergenic |
| GTGGACTTGTGAAAACAGAT+TGG | 0.561998 | 8.1:+4432140 | MS.gene88666:CDS |
| TACGGACAGTGCATTCCAAA+GGG | 0.563184 | 8.1:-4432378 | None:intergenic |
| AATGTGTACACCCTAGGCAA+AGG | 0.565362 | 8.1:+4431277 | MS.gene88666:CDS |
| TGAGATTATATTCAAGTCTG+TGG | 0.566225 | 8.1:+4432092 | MS.gene88666:CDS |
| GTACGGACAGTGCATTCCAA+AGG | 0.598915 | 8.1:-4432379 | None:intergenic |
| CATACCAATGTGTACACCCT+AGG | 0.600781 | 8.1:+4431271 | MS.gene88666:CDS |
| GACCTTAAACGATTCCCTCA+GGG | 0.603618 | 8.1:+4432352 | MS.gene88666:CDS |
| GATGATTGGGCAACAAGAGG+TGG | 0.606066 | 8.1:+4432121 | MS.gene88666:CDS |
| TTCAAGAACTTGGAGAGTGA+AGG | 0.610761 | 8.1:+4432043 | MS.gene88666:CDS |
| CAAGATGTTAGTATCACTTG+GGG | 0.610855 | 8.1:+4430908 | MS.gene88666:CDS |
| GAATTCTTGGGAAATTTGAG+TGG | 0.630242 | 8.1:+4431232 | MS.gene88666:CDS |
| CATTGCAGTTACGTTCAGAA+GGG | 0.632405 | 8.1:+4431185 | MS.gene88666:intron |
| TACGTTCAGAAGGGTCATTG+TGG | 0.637977 | 8.1:+4431194 | MS.gene88666:CDS |
| GGATTGAAAGCCAGAGCCAG+AGG | 0.638116 | 8.1:-4430990 | None:intergenic |
| AGATGTTAGTATCACTTGGG+GGG | 0.655003 | 8.1:+4430910 | MS.gene88666:CDS |
| ATTCCAAAGGGAGACCCTGA+GGG | 0.664464 | 8.1:-4432366 | None:intergenic |
| CATTCCAAAGGGAGACCCTG+AGG | 0.667653 | 8.1:-4432367 | None:intergenic |
| AGAGGTAAGATTGTGAACAA+TGG | 0.680526 | 8.1:+4430938 | MS.gene88666:CDS |
| GCTGATGATTGGGCAACAAG+AGG | 0.682230 | 8.1:+4432118 | MS.gene88666:CDS |
| TGTGTACACCCTAGGCAAAG+GGG | 0.687067 | 8.1:+4431279 | MS.gene88666:CDS |
| AAGATGTTAGTATCACTTGG+GGG | 0.699999 | 8.1:+4430909 | MS.gene88666:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACATTAAACATATTAATA+AGG | - | chr8.1:4431120-4431139 | None:intergenic | 10.0% |
| !!! | AATATGTTTAATGTTTTTTA+TGG | + | chr8.1:4431124-4431143 | MS.gene88666:intron | 10.0% |
| !!! | TAAATTTTTGAAAATATGTA+GGG | + | chr8.1:4431582-4431601 | MS.gene88666:intron | 10.0% |
| !!! | TACATATTTTCAAAAATTTA+AGG | - | chr8.1:4431582-4431601 | None:intergenic | 10.0% |
| !!! | TTAAATTTTTGAAAATATGT+AGG | + | chr8.1:4431581-4431600 | MS.gene88666:intron | 10.0% |
| !! | ATTTAAATATAATAAGAGAG+TGG | + | chr8.1:4431520-4431539 | MS.gene88666:intron | 15.0% |
| !! | TATTTATCAAAATTAAGGAT+TGG | - | chr8.1:4431641-4431660 | None:intergenic | 15.0% |
| !!! | ATTTTCAAAAATTTAAGGAT+TGG | - | chr8.1:4431609-4431628 | None:intergenic | 15.0% |
| !!! | GATCATGTAAATTTTTATTT+TGG | - | chr8.1:4431941-4431960 | None:intergenic | 15.0% |
| !!! | TAAGAATTGTAATTTTTTTG+TGG | + | chr8.1:4431848-4431867 | MS.gene88666:intron | 15.0% |
| !!! | TTATTTTCAAATTCTTTGTT+TGG | + | chr8.1:4431411-4431430 | MS.gene88666:intron | 15.0% |
| !! | AACAAATTATATGTACCAAT+TGG | + | chr8.1:4431822-4431841 | MS.gene88666:intron | 20.0% |
| !! | TCCAATAATCAATATCTTTA+TGG | + | chr8.1:4431010-4431029 | MS.gene88666:CDS | 20.0% |
| !!! | GGATCAAATTTCAAATTTTA+AGG | + | chr8.1:4431541-4431560 | MS.gene88666:intron | 20.0% |
| !!! | TCCATAAAGATATTGATTAT+TGG | - | chr8.1:4431014-4431033 | None:intergenic | 20.0% |
| ! | AGACTTGAATATAATCTCAT+TGG | - | chr8.1:4432091-4432110 | None:intergenic | 25.0% |
| ! | GAAATAGACTTTGAATTCTT+GGG | + | chr8.1:4431220-4431239 | MS.gene88666:CDS | 25.0% |
| ! | GACAATGCATAATATATACA+AGG | - | chr8.1:4431754-4431773 | None:intergenic | 25.0% |
| ! | GAGAACAACAATTCTATTTA+TGG | + | chr8.1:4431305-4431324 | MS.gene88666:CDS | 25.0% |
| ! | TAGATTCTACAAATCAGAAA+AGG | + | chr8.1:4432284-4432303 | MS.gene88666:CDS | 25.0% |
| ! | TGAAATAGACTTTGAATTCT+TGG | + | chr8.1:4431219-4431238 | MS.gene88666:CDS | 25.0% |
| ! | TTACAATTCTTATGTCCAAT+TGG | - | chr8.1:4431840-4431859 | None:intergenic | 25.0% |
| !! | GTTTTCAGATTTTCTATTGA+TGG | + | chr8.1:4432004-4432023 | MS.gene88666:intron | 25.0% |
| !!! | TCAAATTTTAAGGAAGTTGA+GGG | + | chr8.1:4431551-4431570 | MS.gene88666:intron | 25.0% |
| !!! | TTCAAATTTTAAGGAAGTTG+AGG | + | chr8.1:4431550-4431569 | MS.gene88666:intron | 25.0% |
| !!! | TTGTGTACACAGTATTTTTT+TGG | + | chr8.1:4431703-4431722 | MS.gene88666:intron | 25.0% |
| AAATCAGAAAAGGCTCAAAT+GGG | + | chr8.1:4432294-4432313 | MS.gene88666:CDS | 30.0% | |
| AAGTTCTTGAATTCCCTAAT+TGG | - | chr8.1:4432034-4432053 | None:intergenic | 30.0% | |
| AATTAGGGAATTCAAGAACT+TGG | + | chr8.1:4432033-4432052 | MS.gene88666:CDS | 30.0% | |
| ACATTGGTATGAACTATGTA+AGG | - | chr8.1:4431262-4431281 | None:intergenic | 30.0% | |
| ATCAAGATGTTAGTATCACT+TGG | + | chr8.1:4430906-4430925 | MS.gene88666:CDS | 30.0% | |
| CATAATATATACAAGGTCTG+AGG | - | chr8.1:4431747-4431766 | None:intergenic | 30.0% | |
| TAGGTATGAAAATCTGTAGT+TGG | - | chr8.1:4431337-4431356 | None:intergenic | 30.0% | |
| TCAAGATGTTAGTATCACTT+GGG | + | chr8.1:4430907-4430926 | MS.gene88666:CDS | 30.0% | |
| TGAGATTATATTCAAGTCTG+TGG | + | chr8.1:4432092-4432111 | MS.gene88666:CDS | 30.0% | |
| TTCCTAAAAGAAGCAGTAAA+TGG | - | chr8.1:4432175-4432194 | None:intergenic | 30.0% | |
| TTTGCAAGAAGAAATTCCAT+TGG | - | chr8.1:4432224-4432243 | None:intergenic | 30.0% | |
| ! | ATGCAAATTAAACTTGTTCC+TGG | + | chr8.1:4431043-4431062 | MS.gene88666:CDS | 30.0% |
| ! | TGACTTATGTGATTTGTCTT+TGG | + | chr8.1:4431982-4432001 | MS.gene88666:intron | 30.0% |
| ! | TTCATACCTATTCTTTTCTC+TGG | + | chr8.1:4431347-4431366 | MS.gene88666:CDS | 30.0% |
| !!! | TGTACACAGTATTTTTTTGG+TGG | + | chr8.1:4431706-4431725 | MS.gene88666:intron | 30.0% |
| AAGATGTTAGTATCACTTGG+GGG | + | chr8.1:4430909-4430928 | MS.gene88666:CDS | 35.0% | |
| AGAGGTAAGATTGTGAACAA+TGG | + | chr8.1:4430938-4430957 | MS.gene88666:CDS | 35.0% | |
| AGGATTCCAGAGAAAAGAAT+AGG | - | chr8.1:4431356-4431375 | None:intergenic | 35.0% | |
| ATTGGACAAAACACAACCAT+TGG | - | chr8.1:4432206-4432225 | None:intergenic | 35.0% | |
| CAAATCAGAAAAGGCTCAAA+TGG | + | chr8.1:4432293-4432312 | MS.gene88666:CDS | 35.0% | |
| CAAGATGTTAGTATCACTTG+GGG | + | chr8.1:4430908-4430927 | MS.gene88666:CDS | 35.0% | |
| GAATTCTTGGGAAATTTGAG+TGG | + | chr8.1:4431232-4431251 | MS.gene88666:CDS | 35.0% | |
| TATCAACTGAGCTAAAGTCA+CGG | + | chr8.1:4431776-4431795 | MS.gene88666:intron | 35.0% | |
| TTTAGGAACTTCAAAGCCAA+TGG | + | chr8.1:4432187-4432206 | MS.gene88666:CDS | 35.0% | |
| ! | AAGGTCTGAGGTTTAAACTT+CGG | - | chr8.1:4431735-4431754 | None:intergenic | 35.0% |
| ! | AATGGTTGTGTTTTGTCCAA+TGG | + | chr8.1:4432205-4432224 | MS.gene88666:CDS | 35.0% |
| ! | ATGCAGAGTTTGAAACACAT+AGG | + | chr8.1:4431674-4431693 | MS.gene88666:intron | 35.0% |
| ! | CTCCATTTACTGCTTCTTTT+AGG | + | chr8.1:4432170-4432189 | MS.gene88666:CDS | 35.0% |
| ! | TATTGATGGCAGACCAATTA+GGG | + | chr8.1:4432018-4432037 | MS.gene88666:CDS | 35.0% |
| !! | CATAAGTCAAGTTGATCAAG+AGG | - | chr8.1:4431971-4431990 | None:intergenic | 35.0% |
| !!! | ACACAGTATTTTTTTGGTGG+TGG | + | chr8.1:4431709-4431728 | MS.gene88666:intron | 35.0% |
| ACTCTTCTTCTGACAATGCT+TGG | + | chr8.1:4432248-4432267 | MS.gene88666:CDS | 40.0% | |
| AGATGTTAGTATCACTTGGG+GGG | + | chr8.1:4430910-4430929 | MS.gene88666:CDS | 40.0% | |
| AGCATTGTCAGAAGAAGAGT+TGG | - | chr8.1:4432248-4432267 | None:intergenic | 40.0% | |
| ATTGGCTGCTTCTTTGGATA+TGG | - | chr8.1:4432073-4432092 | None:intergenic | 40.0% | |
| CATTGCAGTTACGTTCAGAA+GGG | + | chr8.1:4431185-4431204 | MS.gene88666:intron | 40.0% | |
| GAAACTTACACAACATGTGC+AGG | - | chr8.1:4431376-4431395 | None:intergenic | 40.0% | |
| GTGGACTTGTGAAAACAGAT+TGG | + | chr8.1:4432140-4432159 | MS.gene88666:CDS | 40.0% | |
| TCTGTGGAATGCTGATGATT+GGG | + | chr8.1:4432108-4432127 | MS.gene88666:CDS | 40.0% | |
| TTCAAGAACTTGGAGAGTGA+AGG | + | chr8.1:4432043-4432062 | MS.gene88666:CDS | 40.0% | |
| ! | AATCTCATTGGCTGCTTCTT+TGG | - | chr8.1:4432079-4432098 | None:intergenic | 40.0% |
| ! | CTATTGATGGCAGACCAATT+AGG | + | chr8.1:4432017-4432036 | MS.gene88666:CDS | 40.0% |
| AATGTGTACACCCTAGGCAA+AGG | + | chr8.1:4431277-4431296 | MS.gene88666:CDS | 45.0% | |
| ACGTTCAGAAGGGTCATTGT+GGG | + | chr8.1:4431195-4431214 | MS.gene88666:CDS | 45.0% | |
| ATGTGTACACCCTAGGCAAA+GGG | + | chr8.1:4431278-4431297 | MS.gene88666:CDS | 45.0% | |
| CATACCAATGTGTACACCCT+AGG | + | chr8.1:4431271-4431290 | MS.gene88666:CDS | 45.0% | |
| CTTGTTCCTGGAAATTCAGC+TGG | + | chr8.1:4431055-4431074 | MS.gene88666:CDS | 45.0% | |
| GACCTTAAACGATTCCCTCA+GGG | + | chr8.1:4432352-4432371 | MS.gene88666:CDS | 45.0% | |
| GCATTGCAGTTACGTTCAGA+AGG | + | chr8.1:4431184-4431203 | MS.gene88666:intron | 45.0% | |
| GTCTGTGGAATGCTGATGAT+TGG | + | chr8.1:4432107-4432126 | MS.gene88666:CDS | 45.0% | |
| TACGGACAGTGCATTCCAAA+GGG | - | chr8.1:4432381-4432400 | None:intergenic | 45.0% | |
| TACGTTCAGAAGGGTCATTG+TGG | + | chr8.1:4431194-4431213 | MS.gene88666:CDS | 45.0% | |
| TGACCTTAAACGATTCCCTC+AGG | + | chr8.1:4432351-4432370 | MS.gene88666:CDS | 45.0% | |
| TTAGTATCACTTGGGGGGAT+GGG | + | chr8.1:4430915-4430934 | MS.gene88666:CDS | 45.0% | |
| TTTGCCTAGGGTGTACACAT+TGG | - | chr8.1:4431278-4431297 | None:intergenic | 45.0% | |
| !! | ATATTTATTTATCAAAATTA+AGG | - | chr8.1:4431646-4431665 | None:intergenic | 5.0% |
| !!! | ATTTTTGAAATTTATAAAAA+TGG | - | chr8.1:4431488-4431507 | None:intergenic | 5.0% |
| ATTCCAAAGGGAGACCCTGA+GGG | - | chr8.1:4432369-4432388 | None:intergenic | 50.0% | |
| CTGTCTCTAGACAGAACCTC+TGG | + | chr8.1:4430974-4430993 | MS.gene88666:CDS | 50.0% | |
| GACCCTGAGGGAATCGTTTA+AGG | - | chr8.1:4432357-4432376 | None:intergenic | 50.0% | |
| GATGATTGGGCAACAAGAGG+TGG | + | chr8.1:4432121-4432140 | MS.gene88666:CDS | 50.0% | |
| GCTGATGATTGGGCAACAAG+AGG | + | chr8.1:4432118-4432137 | MS.gene88666:CDS | 50.0% | |
| GTACGGACAGTGCATTCCAA+AGG | - | chr8.1:4432382-4432401 | None:intergenic | 50.0% | |
| GTTAGTATCACTTGGGGGGA+TGG | + | chr8.1:4430914-4430933 | MS.gene88666:CDS | 50.0% | |
| TCCTGGAAATTCAGCTGGCA+CGG | + | chr8.1:4431060-4431079 | MS.gene88666:CDS | 50.0% | |
| TGTGTACACCCTAGGCAAAG+GGG | + | chr8.1:4431279-4431298 | MS.gene88666:CDS | 50.0% | |
| TTCTCTGTCCCCTTTGCCTA+GGG | - | chr8.1:4431290-4431309 | None:intergenic | 50.0% | |
| ACCGTGCCAGCTGAATTTCC+AGG | - | chr8.1:4431064-4431083 | None:intergenic | 55.0% | |
| ATTCCCTCAGGGTCTCCCTT+TGG | + | chr8.1:4432363-4432382 | MS.gene88666:CDS | 55.0% | |
| CATTCCAAAGGGAGACCCTG+AGG | - | chr8.1:4432370-4432389 | None:intergenic | 55.0% | |
| GGATTGAAAGCCAGAGCCAG+AGG | - | chr8.1:4430993-4431012 | None:intergenic | 55.0% | |
| GTTCTCTGTCCCCTTTGCCT+AGG | - | chr8.1:4431291-4431310 | None:intergenic | 55.0% | |
| ! | CTAGACAGAACCTCTGGCTC+TGG | + | chr8.1:4430980-4430999 | MS.gene88666:CDS | 55.0% |
| ATCACTTGGGGGGATGGGAG+AGG | + | chr8.1:4430920-4430939 | MS.gene88666:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 4430881 | 4432411 | 4430881 | ID=MS.gene88666 |
| chr8.1 | mRNA | 4430881 | 4432411 | 4430881 | ID=MS.gene88666.t1;Parent=MS.gene88666 |
| chr8.1 | exon | 4430881 | 4431096 | 4430881 | ID=MS.gene88666.t1.exon1;Parent=MS.gene88666.t1 |
| chr8.1 | CDS | 4430881 | 4431096 | 4430881 | ID=cds.MS.gene88666.t1;Parent=MS.gene88666.t1 |
| chr8.1 | exon | 4431193 | 4431386 | 4431193 | ID=MS.gene88666.t1.exon2;Parent=MS.gene88666.t1 |
| chr8.1 | CDS | 4431193 | 4431386 | 4431193 | ID=cds.MS.gene88666.t1;Parent=MS.gene88666.t1 |
| chr8.1 | exon | 4432012 | 4432411 | 4432012 | ID=MS.gene88666.t1.exon3;Parent=MS.gene88666.t1 |
| chr8.1 | CDS | 4432012 | 4432411 | 4432012 | ID=cds.MS.gene88666.t1;Parent=MS.gene88666.t1 |
| Gene Sequence |
| Protein sequence |
