AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010606.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010606.01.T01 MTR_2g067610 98.582 141 2 0 2 142 29 169 1.55e-99 289
MsG0280010606.01.T01 MTR_2g067610 38.542 96 59 0 14 109 211 306 2.74e-17 77.0
MsG0280010606.01.T01 MTR_2g088390 98.582 141 2 0 2 142 147 287 2.79e-98 290
MsG0280010606.01.T01 MTR_2g088390 38.542 96 59 0 14 109 329 424 3.41e-17 77.4
MsG0280010606.01.T01 MTR_6g059930 48.387 124 64 0 2 125 118 241 3.17e-38 134
MsG0280010606.01.T01 MTR_6g059930 36.975 119 70 1 4 122 292 405 2.14e-19 83.6
MsG0280010606.01.T01 MTR_6g059930 48.387 124 64 0 2 125 150 273 5.17e-38 134
MsG0280010606.01.T01 MTR_6g059930 36.975 119 70 1 4 122 324 437 3.05e-19 83.2
MsG0280010606.01.T01 MTR_5g072520 48.182 110 52 2 27 131 1 110 6.94e-31 115
MsG0280010606.01.T01 MTR_5g072520 31.933 119 76 1 4 122 170 283 5.07e-18 79.7
MsG0280010606.01.T01 MTR_2g088750 40.777 103 61 0 5 107 68 170 8.91e-24 94.7
MsG0280010606.01.T01 MTR_2g088750 37.755 98 61 0 8 105 214 311 7.59e-15 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010606.01.T01 AT5G57930 73.684 133 35 0 2 134 143 275 1.80e-71 221
MsG0280010606.01.T01 AT5G57930 38.542 96 59 0 14 109 325 420 1.90e-17 78.2
MsG0280010606.01.T01 AT5G57930 73.684 133 35 0 2 134 140 272 2.12e-71 221
MsG0280010606.01.T01 AT5G57930 38.542 96 59 0 14 109 322 417 2.02e-17 78.2
MsG0280010606.01.T01 AT1G64810 50.427 117 58 0 9 125 140 256 1.32e-37 133
MsG0280010606.01.T01 AT1G64810 34.234 111 68 1 12 122 317 422 9.56e-17 76.3
MsG0280010606.01.T01 AT1G64810 50.427 117 58 0 9 125 164 280 1.79e-37 133
MsG0280010606.01.T01 AT1G64810 34.234 111 68 1 12 122 341 446 9.64e-17 76.3
MsG0280010606.01.T01 AT5G61930 43.165 139 74 2 2 135 105 243 7.90e-33 119
MsG0280010606.01.T01 AT5G61930 33.000 100 66 1 9 107 279 378 5.93e-17 76.6
MsG0280010606.01.T01 AT5G61930 43.165 139 74 2 2 135 105 243 7.90e-33 119
MsG0280010606.01.T01 AT5G61930 33.000 100 66 1 9 107 279 378 5.93e-17 76.6
MsG0280010606.01.T01 AT3G21740 44.231 104 52 2 5 105 68 168 6.90e-24 95.1

Find 74 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCGGTTATATTGTCTTTC+TGG 0.107665 2:-72136384 MsG0280010606.01.T01:five_prime_UTR
CACGAATAGGGAAAGAGTTT+TGG 0.227943 2:+72136580 None:intergenic
TTCGAGAGTTTCCCACAAAA+AGG 0.289551 2:-72132849 MsG0280010606.01.T01:CDS
TTCACTAGCAATCCATTCTT+TGG 0.294053 2:+72133496 None:intergenic
TTCTTCCCAATACGGATTAT+TGG 0.295755 2:+72132817 None:intergenic
CATCATATGCTTCTGGTATA+AGG 0.299765 2:+72133470 None:intergenic
ACCAAACACAACCACAATAT+TGG 0.323045 2:-72136486 MsG0280010606.01.T01:five_prime_UTR
ACCAATATTGTGGTTGTGTT+TGG 0.344619 2:+72136485 None:intergenic
GCATATGGAACTACACGAAT+AGG 0.346029 2:+72136567 None:intergenic
CCATTCTTTGGCGCTGGCAT+TGG 0.352477 2:+72133508 None:intergenic
CATTATACATCATATGCTTC+TGG 0.352575 2:+72133463 None:intergenic
GACTTGAATGGATGTCCAAC+AGG 0.354842 2:+72133066 None:intergenic
CAAATTCCTTCTTCCCAATA+CGG 0.402113 2:+72132809 None:intergenic
ATTGGCTTCCCACACGCATA+TGG 0.413894 2:+72136552 None:intergenic
GAAAGCCAATAATCCGTATT+GGG 0.415745 2:-72132822 MsG0280010606.01.T01:CDS
TTGTCTTTCTGGAGGGAGAA+TGG 0.435712 2:-72136373 MsG0280010606.01.T01:five_prime_UTR
GTACCTTTACATGACTTGAA+TGG 0.436859 2:+72133054 None:intergenic
AGAAAGCCAATAATCCGTAT+TGG 0.437497 2:-72132823 MsG0280010606.01.T01:CDS
ATGCAGAGCTCAACCACTGC+TGG 0.441347 2:+72132889 None:intergenic
TCCTCGGCATTATTCGAGAA+AGG 0.445340 2:-72133620 MsG0280010606.01.T01:five_prime_UTR
CGTAGTTCAACAATGGGAAC+TGG 0.447244 2:+72133583 None:intergenic
CATATGGAACTACACGAATA+GGG 0.450707 2:+72136568 None:intergenic
GTCTCTCTCTCAAACACAAT+CGG 0.454144 2:-72136519 MsG0280010606.01.T01:five_prime_UTR
CCAATGCCAGCGCCAAAGAA+TGG 0.459424 2:-72133508 MsG0280010606.01.T01:five_prime_UTR
TCAACAATGGGAACTGGAAA+AGG 0.470165 2:+72133589 None:intergenic
AGAGAGACCGTTGATGCCAT+TGG 0.471070 2:+72136534 None:intergenic
AGCAATCCATTCTTTGGCGC+TGG 0.479388 2:+72133502 None:intergenic
GATGTCCAACAGGGCCTACA+TGG 0.490856 2:+72133076 None:intergenic
TATTGGGAAGAAGGAATTTG+TGG 0.495922 2:-72132806 MsG0280010606.01.T01:CDS
GTTGTGTGGGGAGGAATGGA+TGG 0.497177 2:+72136624 None:intergenic
GAAATCCATGTAGGCCCTGT+TGG 0.497522 2:-72133081 MsG0280010606.01.T01:CDS
AATAATCCGTATTGGGAAGA+AGG 0.501252 2:-72132815 MsG0280010606.01.T01:CDS
TCCGCAAGGGCATTCATGAA+TGG 0.506124 2:-72133020 MsG0280010606.01.T01:CDS
TTTCACCTCTATGATCGTCT+TGG 0.508754 2:-72132955 MsG0280010606.01.T01:CDS
TAGTACCCGTGCATGCTTGT+GGG 0.512728 2:-72133398 MsG0280010606.01.T01:intron
GCCCGTCGTAGTTCAACAAT+GGG 0.513589 2:+72133577 None:intergenic
CGGTTATATTGTCTTTCTGG+AGG 0.517532 2:-72136381 MsG0280010606.01.T01:five_prime_UTR
TTGAACTACGACGGGCAGCT+AGG 0.518556 2:-72133570 MsG0280010606.01.T01:five_prime_UTR
TGATTATGATGCAGCTTCCA+AGG 0.521646 2:-72136334 MsG0280010606.01.T01:intron
TCCCATTGTTGAACTACGAC+GGG 0.525008 2:-72133578 MsG0280010606.01.T01:five_prime_UTR
CATCCATTCAAGTCATGTAA+AGG 0.535813 2:-72133057 MsG0280010606.01.T01:CDS
TAGAGGTGAAATGCGTCAAT+CGG 0.537159 2:+72132967 None:intergenic
AACAGAGATTCTCCATCCCT+CGG 0.542922 2:-72132915 MsG0280010606.01.T01:CDS
CACTGCTGGAATCCGAGGGA+TGG 0.542954 2:+72132903 None:intergenic
GGTTATATTGTCTTTCTGGA+GGG 0.545916 2:-72136380 MsG0280010606.01.T01:five_prime_UTR
GTTGAGCTCTGCATTCAAGC+TGG 0.552474 2:-72132880 MsG0280010606.01.T01:CDS
TGAACTACGACGGGCAGCTA+GGG 0.562440 2:-72133569 MsG0280010606.01.T01:five_prime_UTR
AGTTAAGTTTACCAATATTG+TGG 0.566622 2:+72136475 None:intergenic
AGCATATGATGTATAATGCT+AGG 0.567082 2:-72133458 MsG0280010606.01.T01:exon
TAATTACCCACAAGCATGCA+CGG 0.568910 2:+72133392 None:intergenic
TCAGCTATCAACGGTTGTGT+AGG 0.569223 2:+72132743 None:intergenic
CATCCCTCGGATTCCAGCAG+TGG 0.569277 2:-72132902 MsG0280010606.01.T01:CDS
TCAACCACTGCTGGAATCCG+AGG 0.576038 2:+72132898 None:intergenic
TGGGAAGCCAATGGCATCAA+CGG 0.577594 2:-72136541 MsG0280010606.01.T01:five_prime_UTR
TGCCCGTCGTAGTTCAACAA+TGG 0.579940 2:+72133576 None:intergenic
TCCATTCATGAATGCCCTTG+CGG 0.584521 2:+72133019 None:intergenic
AGAAGATGAAAGATGAGCCA+AGG 0.591809 2:-72133537 MsG0280010606.01.T01:five_prime_UTR
CGTGTAGTTCCATATGCGTG+TGG 0.597764 2:-72136561 MsG0280010606.01.T01:five_prime_UTR
TACGACGGGCAGCTAGGGAG+AGG 0.599315 2:-72133564 MsG0280010606.01.T01:five_prime_UTR
TTCCCATTGTTGAACTACGA+CGG 0.604042 2:-72133579 MsG0280010606.01.T01:five_prime_UTR
CAACCACTGCTGGAATCCGA+GGG 0.607681 2:+72132899 None:intergenic
TCCTTTCTCGAATAATGCCG+AGG 0.613103 2:+72133619 None:intergenic
TACACAGTCGAACATCCGCA+AGG 0.613806 2:-72133034 MsG0280010606.01.T01:CDS
GTAGTACCCGTGCATGCTTG+TGG 0.617486 2:-72133399 MsG0280010606.01.T01:CDS
GCTTTCCAAGACGATCATAG+AGG 0.631399 2:+72132950 None:intergenic
AATTACCCACAAGCATGCAC+GGG 0.635868 2:+72133393 None:intergenic
TCTATGATCGTCTTGGAAAG+CGG 0.638858 2:-72132948 MsG0280010606.01.T01:CDS
ATATGCGTGTGGGAAGCCAA+TGG 0.642526 2:-72136550 MsG0280010606.01.T01:five_prime_UTR
TGGTGCAGTGAAATCCATGT+AGG 0.642614 2:-72133090 MsG0280010606.01.T01:CDS
GTGTAGTTCCATATGCGTGT+GGG 0.646651 2:-72136560 MsG0280010606.01.T01:five_prime_UTR
TGAATGGACAAATGCACATG+TGG 0.654066 2:-72133004 MsG0280010606.01.T01:CDS
ACTTGAATGGATGTCCAACA+GGG 0.677534 2:+72133067 None:intergenic
ACACAGTCGAACATCCGCAA+GGG 0.678137 2:-72133033 MsG0280010606.01.T01:CDS
CAACTTTACAAGCAGGACAG+TGG 0.681325 2:-72133682 MsG0280010606.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTACTTTGTTTTTATAT+TGG + Chr2:72135524-72135543 None:intergenic 10.0%
! CGGGGGGGGGGGGGGGGGGG+GGG + Chr2:72134593-72134612 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+TGG + Chr2:72134590-72134609 None:intergenic 100.0%
!! ATGAAATACAGAAAATTTAT+TGG + Chr2:72136215-72136234 None:intergenic 15.0%
!! TCATAAAAAAATTGGATTAA+TGG - Chr2:72134190-72134209 MsG0280010606.01.T01:intron 15.0%
!!! AACTTTATTTGTATATTTGA+TGG - Chr2:72134667-72134686 MsG0280010606.01.T01:intron 15.0%
!!! AATGATACTGATTATATATA+AGG - Chr2:72135006-72135025 MsG0280010606.01.T01:intron 15.0%
!!! ACTTTATTTGTATATTTGAT+GGG - Chr2:72134668-72134687 MsG0280010606.01.T01:intron 15.0%
!!! ATCTTTTGTTAATTTAGAAA+AGG + Chr2:72134457-72134476 None:intergenic 15.0%
!!! TGTTTTCTTTTTAAAAGTTA+AGG - Chr2:72134641-72134660 MsG0280010606.01.T01:intron 15.0%
!!! TTAACTTTTAAAAAGAAAAC+AGG + Chr2:72134642-72134661 None:intergenic 15.0%
!! ATAAGGATAGTAAAAACTAT+TGG - Chr2:72134975-72134994 MsG0280010606.01.T01:intron 20.0%
!! ATATTTATATTGCTTGATTG+AGG - Chr2:72135119-72135138 MsG0280010606.01.T01:intron 20.0%
!! GGTATTAGCAAAAAAAAAAA+CGG + Chr2:72134613-72134632 None:intergenic 20.0%
!! GTATTAGCAAAAAAAAAAAC+GGG + Chr2:72134612-72134631 None:intergenic 20.0%
!! TAAATGATATAGAAATACCA+AGG + Chr2:72134753-72134772 None:intergenic 20.0%
!! TAAGGATAGTAAAAACTATT+TGG - Chr2:72134976-72134995 MsG0280010606.01.T01:intron 20.0%
!! TATTAGCAAAAAAAAAAACG+GGG + Chr2:72134611-72134630 None:intergenic 20.0%
!! TTATATATAATCAGTATCAC+AGG + Chr2:72134959-72134978 None:intergenic 20.0%
!! TTTATAATGGTCAAAATGTT+AGG + Chr2:72135167-72135186 None:intergenic 20.0%
!! TTTCTATATCATTTATCATC+CGG - Chr2:72134758-72134777 MsG0280010606.01.T01:intron 20.0%
!!! AATGAAGCAATTTTCATTTT+AGG + Chr2:72135225-72135244 None:intergenic 20.0%
!!! CTTTATTTGTATATTTGATG+GGG - Chr2:72134669-72134688 MsG0280010606.01.T01:intron 20.0%
!!! TAATCCAATTTTTTTATGAG+AGG + Chr2:72134189-72134208 None:intergenic 20.0%
!!! TAATTTATGTTATAGGTTGA+TGG + Chr2:72134886-72134905 None:intergenic 20.0%
!!! TGTGATACTGATTATATATA+AGG - Chr2:72134958-72134977 MsG0280010606.01.T01:intron 20.0%
!!! TTTCTTTTTAAAAGTTAAGG+TGG - Chr2:72134644-72134663 MsG0280010606.01.T01:intron 20.0%
!!! TTTTTGTTACATAAAGTATC+TGG + Chr2:72136181-72136200 None:intergenic 20.0%
! AAAACAAAGTTAACTAACCT+TGG + Chr2:72133113-72133132 None:intergenic 25.0%
! AACAAAACAGTTATATACAG+AGG + Chr2:72135708-72135727 None:intergenic 25.0%
! AATACAGAAAATTTATTGGC+AGG + Chr2:72136211-72136230 None:intergenic 25.0%
! AATGAAAAACATGCATCAAA+TGG + Chr2:72133719-72133738 None:intergenic 25.0%
! ACCTATAACATAAATTACTG+AGG - Chr2:72134889-72134908 MsG0280010606.01.T01:intron 25.0%
! AGCTTGGAAAAACATAAAAA+GGG + Chr2:72134359-72134378 None:intergenic 25.0%
! AGTTAAGTTTACCAATATTG+TGG + Chr2:72132955-72132974 None:intergenic 25.0%
! ATAATGTAATTCACCAAATC+CGG + Chr2:72134780-72134799 None:intergenic 25.0%
! ATTAGCAAAAAAAAAAACGG+GGG + Chr2:72134610-72134629 None:intergenic 25.0%
! CAATTGCATAAAAATCTAGT+AGG + Chr2:72132755-72132774 None:intergenic 25.0%
! CAGTATATTAATTGTAGTTG+TGG - Chr2:72134806-72134825 MsG0280010606.01.T01:intron 25.0%
! GTAAAAACTATTTGGTTGAA+AGG - Chr2:72135032-72135051 MsG0280010606.01.T01:intron 25.0%
! TAAAAAGAAAACAGGTAGTT+TGG + Chr2:72134634-72134653 None:intergenic 25.0%
! TCTAATAACAATAAAACACG+AGG + Chr2:72135463-72135482 None:intergenic 25.0%
! TTGTCCTCTCATAAAAAAAT+TGG - Chr2:72134182-72134201 MsG0280010606.01.T01:intron 25.0%
!! AACTTTGTTATGAGTACTAT+GGG - Chr2:72133855-72133874 MsG0280010606.01.T01:intron 25.0%
!! AGTAAAAACTATTGGTTGAA+AGG - Chr2:72134983-72135002 MsG0280010606.01.T01:intron 25.0%
!! CTACACAAAATTTCATGTTT+TGG - Chr2:72136096-72136115 MsG0280010606.01.T01:intron 25.0%
!! TAATTTTTCCAACATGAGTA+AGG + Chr2:72136311-72136330 None:intergenic 25.0%
!! TTCATTGAGTTTTTGTCATT+TGG - Chr2:72135199-72135218 MsG0280010606.01.T01:intron 25.0%
!!! ATTTTAGAAGCATGATTCTT+TGG - Chr2:72134844-72134863 MsG0280010606.01.T01:intron 25.0%
!!! CATTTTGACCATTATAAATC+CGG - Chr2:72135169-72135188 MsG0280010606.01.T01:intron 25.0%
!!! GAGAGGATTTTTTTATTTGA+TGG - Chr2:72134135-72134154 MsG0280010606.01.T01:intron 25.0%
AAACCAAATGTCCAATTAAG+CGG + Chr2:72133231-72133250 None:intergenic 30.0%
AAACTCAATGAAAACTTGAC+CGG + Chr2:72135191-72135210 None:intergenic 30.0%
AAACTTGACCGGATTTATAA+TGG + Chr2:72135180-72135199 None:intergenic 30.0%
AACTATTTGGTTGAAAGGAT+TGG - Chr2:72135037-72135056 MsG0280010606.01.T01:intron 30.0%
AATATGCCAGAATTTGTATC+TGG + Chr2:72135104-72135123 None:intergenic 30.0%
AATTGGATTAATGGAGAGAT+AGG - Chr2:72134199-72134218 MsG0280010606.01.T01:intron 30.0%
ACATCACAAAAATCACTCTA+GGG + Chr2:72134325-72134344 None:intergenic 30.0%
AGCATATGATGTATAATGCT+AGG - Chr2:72135969-72135988 MsG0280010606.01.T01:intron 30.0%
AGTATGCATACTTCTTCTAA+AGG - Chr2:72133526-72133545 MsG0280010606.01.T01:five_prime_UTR 30.0%
CAAATTGTATCCATTCTAGA+AGG + Chr2:72135659-72135678 None:intergenic 30.0%
CAGCTTGGAAAAACATAAAA+AGG + Chr2:72134360-72134379 None:intergenic 30.0%
CATTATACATCATATGCTTC+TGG + Chr2:72135967-72135986 None:intergenic 30.0%
CCTATGTTAGGAAGAAAAAA+GGG - Chr2:72133777-72133796 MsG0280010606.01.T01:intron 30.0%
CTATGTTAGGAAGAAAAAAG+GGG - Chr2:72133778-72133797 MsG0280010606.01.T01:intron 30.0%
GAAATTGTTCTTTAACTCCT+TGG - Chr2:72134733-72134752 MsG0280010606.01.T01:intron 30.0%
GATACAATTTGGCTAGAATT+AGG - Chr2:72135668-72135687 MsG0280010606.01.T01:intron 30.0%
GCCTCAGTAATTTATGTTAT+AGG + Chr2:72134893-72134912 None:intergenic 30.0%
GTATGCATACTTCTTCTAAA+GGG - Chr2:72133527-72133546 MsG0280010606.01.T01:five_prime_UTR 30.0%
TACATCACAAAAATCACTCT+AGG + Chr2:72134326-72134345 None:intergenic 30.0%
TAGAGTATGCAACATAGATT+CGG + Chr2:72133641-72133660 None:intergenic 30.0%
TATCATTTATCATCCGGATT+TGG - Chr2:72134764-72134783 MsG0280010606.01.T01:intron 30.0%
TATTTCCACAATACACTCTT+TGG - Chr2:72133998-72134017 MsG0280010606.01.T01:intron 30.0%
TCATGTTGGAAAAATTATGC+AGG - Chr2:72136314-72136333 MsG0280010606.01.T01:intron 30.0%
TGTGTGATTGAAATGTTGTA+TGG - Chr2:72134504-72134523 MsG0280010606.01.T01:intron 30.0%
TTAGCAAAAAAAAAAACGGG+GGG + Chr2:72134609-72134628 None:intergenic 30.0%
TTATATTGCTTGATTGAGGT+GGG - Chr2:72135123-72135142 MsG0280010606.01.T01:intron 30.0%
TTCTAATAGCCAGTTTATCA+TGG + Chr2:72135306-72135325 None:intergenic 30.0%
TTTATATTGCTTGATTGAGG+TGG - Chr2:72135122-72135141 MsG0280010606.01.T01:intron 30.0%
TTTCGGTTATATTGTCTTTC+TGG - Chr2:72133043-72133062 MsG0280010606.01.T01:CDS 30.0%
! AATTTCCTTCTTTTGCTCTA+CGG + Chr2:72134104-72134123 None:intergenic 30.0%
! CTGATACCATCTTAGAATTT+TGG + Chr2:72133434-72133453 None:intergenic 30.0%
! GAAATTTGATGATCTAAGAG+AGG - Chr2:72134118-72134137 MsG0280010606.01.T01:intron 30.0%
! GAACTTTGTTATGAGTACTA+TGG - Chr2:72133854-72133873 MsG0280010606.01.T01:intron 30.0%
! TTTTAGCAGAATCATGTCAT+TGG - Chr2:72134693-72134712 MsG0280010606.01.T01:intron 30.0%
!! CAAAATTCTAAGATGGTATC+AGG - Chr2:72133432-72133451 MsG0280010606.01.T01:CDS 30.0%
!! CTTCTAGAATGGATACAATT+TGG - Chr2:72135657-72135676 MsG0280010606.01.T01:intron 30.0%
!!! ATGTTTTGGTTTTGATTGAG+TGG - Chr2:72136110-72136129 MsG0280010606.01.T01:intron 30.0%
!!! TCAAAGCACATTTTTTGAGT+AGG + Chr2:72136285-72136304 None:intergenic 30.0%
!!! TTCTGTTACTGTTAGTTTTC+TGG - Chr2:72134049-72134068 MsG0280010606.01.T01:intron 30.0%
AAGGTCTGAACTGAGTTTAT+TGG - Chr2:72133405-72133424 MsG0280010606.01.T01:CDS 35.0%
AAGTTTAGATGTCATGTGCT+TGG + Chr2:72133685-72133704 None:intergenic 35.0%
AATAATCCGTATTGGGAAGA+AGG - Chr2:72136612-72136631 MsG0280010606.01.T01:five_prime_UTR 35.0%
ACACGCTTAGGAAAAATCAA+AGG + Chr2:72134393-72134412 None:intergenic 35.0%
ACCAAACACAACCACAATAT+TGG - Chr2:72132941-72132960 MsG0280010606.01.T01:CDS 35.0%
ACCAATATTGTGGTTGTGTT+TGG + Chr2:72132945-72132964 None:intergenic 35.0%
AGAAAGCCAATAATCCGTAT+TGG - Chr2:72136604-72136623 MsG0280010606.01.T01:five_prime_UTR 35.0%
AGGTTACAAACACTAGACAA+TGG + Chr2:72133284-72133303 None:intergenic 35.0%
AGTTTAGATGTCATGTGCTT+GGG + Chr2:72133684-72133703 None:intergenic 35.0%
ATTCCATCACATGTCATTAG+AGG - Chr2:72135404-72135423 MsG0280010606.01.T01:intron 35.0%
CAAATTCCTTCTTCCCAATA+CGG + Chr2:72136621-72136640 None:intergenic 35.0%
CACGCTTAGGAAAAATCAAA+GGG + Chr2:72134392-72134411 None:intergenic 35.0%
CATAGCAGAAACCTGATTAT+AGG + Chr2:72133318-72133337 None:intergenic 35.0%
CATATGGAACTACACGAATA+GGG + Chr2:72132862-72132881 None:intergenic 35.0%
CATCATATGCTTCTGGTATA+AGG + Chr2:72135960-72135979 None:intergenic 35.0%
CATCCATTCAAGTCATGTAA+AGG - Chr2:72136370-72136389 MsG0280010606.01.T01:five_prime_UTR 35.0%
GAAAGCCAATAATCCGTATT+GGG - Chr2:72136605-72136624 MsG0280010606.01.T01:five_prime_UTR 35.0%
GAGATACCAGATACAAATTC+TGG - Chr2:72135095-72135114 MsG0280010606.01.T01:intron 35.0%
GAGTGTATTGTGGAAATAGA+AGG + Chr2:72133996-72134015 None:intergenic 35.0%
GCCTATGTTAGGAAGAAAAA+AGG - Chr2:72133776-72133795 MsG0280010606.01.T01:intron 35.0%
GGTTACAAACACTAGACAAT+GGG + Chr2:72133283-72133302 None:intergenic 35.0%
GGTTATATTGTCTTTCTGGA+GGG - Chr2:72133047-72133066 MsG0280010606.01.T01:CDS 35.0%
GGTTGTGTTTATAAGCAGTT+CGG + Chr2:72135503-72135522 None:intergenic 35.0%
GTACCTTTACATGACTTGAA+TGG + Chr2:72136376-72136395 None:intergenic 35.0%
GTTACAAACACTAGACAATG+GGG + Chr2:72133282-72133301 None:intergenic 35.0%
GTTACCACATTGTTGAGATA+AGG - Chr2:72133386-72133405 MsG0280010606.01.T01:intron 35.0%
GTTTGTCAATAGTATGCTAG+AGG + Chr2:72136077-72136096 None:intergenic 35.0%
TAGAAGGCTAATTCTAGTGA+GGG + Chr2:72135643-72135662 None:intergenic 35.0%
TAGCAAAAAAAAAAACGGGG+GGG + Chr2:72134608-72134627 None:intergenic 35.0%
TATATTGCTTGATTGAGGTG+GGG - Chr2:72135124-72135143 MsG0280010606.01.T01:intron 35.0%
TATTGGGAAGAAGGAATTTG+TGG - Chr2:72136621-72136640 MsG0280010606.01.T01:five_prime_UTR 35.0%
TCAATAGTATGCTAGAGGAT+AGG + Chr2:72136072-72136091 None:intergenic 35.0%
TGCAGATGTAGGGAAAAAAA+AGG - Chr2:72135361-72135380 MsG0280010606.01.T01:intron 35.0%
TGTTGGAAAAATTATGCAGG+TGG - Chr2:72136317-72136336 MsG0280010606.01.T01:intron 35.0%
TGTTTGTGCTTCTTGTATCT+TGG - Chr2:72133472-72133491 MsG0280010606.01.T01:exon 35.0%
TTACAAACACTAGACAATGG+GGG + Chr2:72133281-72133300 None:intergenic 35.0%
TTCACTAGCAATCCATTCTT+TGG + Chr2:72135934-72135953 None:intergenic 35.0%
TTTGATGTCCTTACTCATGT+TGG - Chr2:72136300-72136319 MsG0280010606.01.T01:intron 35.0%
! ACATTTTCGCGTCGAAAAAT+TGG - Chr2:72133004-72133023 MsG0280010606.01.T01:CDS 35.0%
! ACGAATAGGGAAAGAGTTTT+GGG + Chr2:72132849-72132868 None:intergenic 35.0%
! AGTTATCACACTAGTCTCAT+GGG - Chr2:72134235-72134254 MsG0280010606.01.T01:intron 35.0%
! ATTTTTCCTAAGCGTGTGTT+TGG - Chr2:72134396-72134415 MsG0280010606.01.T01:intron 35.0%
! GAGACGCAATAAAGGTTTTA+AGG + Chr2:72133202-72133221 None:intergenic 35.0%
! GATACGGTCATAGATGTTTT+CGG - Chr2:72133026-72133045 MsG0280010606.01.T01:CDS 35.0%
! TAGTTATCACACTAGTCTCA+TGG - Chr2:72134234-72134253 MsG0280010606.01.T01:intron 35.0%
! TATGTTTTTCCAAGCTGAGT+TGG - Chr2:72134363-72134382 MsG0280010606.01.T01:intron 35.0%
! TTCTTCCCAATACGGATTAT+TGG + Chr2:72136613-72136632 None:intergenic 35.0%
!! CTAGAATTAGCCTTCTAGAA+TGG - Chr2:72135646-72135665 MsG0280010606.01.T01:intron 35.0%
!! TGTTATAGGTTGATGGTTTC+CGG + Chr2:72134879-72134898 None:intergenic 35.0%
!!! AAGCACATTTTTTGAGTAGG+AGG + Chr2:72136282-72136301 None:intergenic 35.0%
!!! CCCTTTTTTCTTCCTAACAT+AGG + Chr2:72133780-72133799 None:intergenic 35.0%
!!! CTCAAAATGCTGATTTTCCT+CGG - Chr2:72135791-72135810 MsG0280010606.01.T01:intron 35.0%
!!! GGATGGATAGAGTTTTGTTT+GGG + Chr2:72132789-72132808 None:intergenic 35.0%
!!! TGGATGGATAGAGTTTTGTT+TGG + Chr2:72132790-72132809 None:intergenic 35.0%
AAATGTCCAATTAAGCGGCT+AGG + Chr2:72133226-72133245 None:intergenic 40.0%
AATGTCCAATTAAGCGGCTA+GGG + Chr2:72133225-72133244 None:intergenic 40.0%
ACTTGAATGGATGTCCAACA+GGG + Chr2:72136363-72136382 None:intergenic 40.0%
AGAAGATGAAAGATGAGCCA+AGG - Chr2:72135890-72135909 MsG0280010606.01.T01:intron 40.0%
AGCAAAAAAAAAAACGGGGG+GGG + Chr2:72134607-72134626 None:intergenic 40.0%
ATCAGGTCTATAGAGAGAAG+AGG - Chr2:72133814-72133833 MsG0280010606.01.T01:intron 40.0%
CAGACCTTATCTCAACAATG+TGG + Chr2:72133393-72133412 None:intergenic 40.0%
CATGACAAGCCATGATAAAC+TGG - Chr2:72135294-72135313 MsG0280010606.01.T01:intron 40.0%
CCTACATCTGCAATATTGCA+CGG + Chr2:72135353-72135372 None:intergenic 40.0%
CGGTTATATTGTCTTTCTGG+AGG - Chr2:72133046-72133065 MsG0280010606.01.T01:CDS 40.0%
CGTGCAATATTGCAGATGTA+GGG - Chr2:72135351-72135370 MsG0280010606.01.T01:intron 40.0%
CTACATCTGCAATATTGCAC+GGG + Chr2:72135352-72135371 None:intergenic 40.0%
CTAGAAGGCTAATTCTAGTG+AGG + Chr2:72135644-72135663 None:intergenic 40.0%
GAGATCGTTATTGTTAGTCG+CGG - Chr2:72133896-72133915 MsG0280010606.01.T01:intron 40.0%
GCATATGGAACTACACGAAT+AGG + Chr2:72132863-72132882 None:intergenic 40.0%
GGGGAAGCTAACAAATAATC+AGG - Chr2:72133797-72133816 MsG0280010606.01.T01:intron 40.0%
GTCTCTCTCTCAAACACAAT+CGG - Chr2:72132908-72132927 MsG0280010606.01.T01:CDS 40.0%
TAATTACCCACAAGCATGCA+CGG + Chr2:72136038-72136057 None:intergenic 40.0%
TAGAGGTGAAATGCGTCAAT+CGG + Chr2:72136463-72136482 None:intergenic 40.0%
TAGCCGCTTAATTGGACATT+TGG - Chr2:72133225-72133244 MsG0280010606.01.T01:intron 40.0%
TAGTATGCTAGAGGATAGGA+AGG + Chr2:72136068-72136087 None:intergenic 40.0%
TATGAAGCCAGAAACAACAG+CGG + Chr2:72136151-72136170 None:intergenic 40.0%
TCAACAATGGGAACTGGAAA+AGG + Chr2:72135841-72135860 None:intergenic 40.0%
TCCACAATACACTCTTTGGT+TGG - Chr2:72134002-72134021 MsG0280010606.01.T01:intron 40.0%
TCGCGTCGAAAAATTGGATA+CGG - Chr2:72133010-72133029 MsG0280010606.01.T01:CDS 40.0%
TCTATGATCGTCTTGGAAAG+CGG - Chr2:72136479-72136498 MsG0280010606.01.T01:five_prime_UTR 40.0%
TGAATGGACAAATGCACATG+TGG - Chr2:72136423-72136442 MsG0280010606.01.T01:five_prime_UTR 40.0%
TGATTATGATGCAGCTTCCA+AGG - Chr2:72133093-72133112 MsG0280010606.01.T01:CDS 40.0%
TGCAACACTCACCTATAATC+AGG - Chr2:72133304-72133323 MsG0280010606.01.T01:intron 40.0%
TGCTTGTAAAGTTGAGACGA+AGG + Chr2:72135739-72135758 None:intergenic 40.0%
TTCCCATTGTTGAACTACGA+CGG - Chr2:72135848-72135867 MsG0280010606.01.T01:intron 40.0%
TTCGAGAGTTTCCCACAAAA+AGG - Chr2:72136578-72136597 MsG0280010606.01.T01:five_prime_UTR 40.0%
TTCGTCTCAACTTTACAAGC+AGG - Chr2:72135738-72135757 MsG0280010606.01.T01:intron 40.0%
TTTCACCTCTATGATCGTCT+TGG - Chr2:72136472-72136491 MsG0280010606.01.T01:five_prime_UTR 40.0%
! AACGGTTGTGTAGGTTTTCT+GGG + Chr2:72136678-72136697 None:intergenic 40.0%
! ATACTTCTTCTAAAGGGCAC+GGG - Chr2:72133533-72133552 MsG0280010606.01.T01:five_prime_UTR 40.0%
! CAACATAGATTCGGTAAGTG+TGG + Chr2:72133632-72133651 None:intergenic 40.0%
! CACGAATAGGGAAAGAGTTT+TGG + Chr2:72132850-72132869 None:intergenic 40.0%
! CATACTTCTTCTAAAGGGCA+CGG - Chr2:72133532-72133551 MsG0280010606.01.T01:five_prime_UTR 40.0%
! CGAGGAAAATCAGCATTTTG+AGG + Chr2:72135793-72135812 None:intergenic 40.0%
! GATTATAGGTGAGTGTTGCA+AGG + Chr2:72133304-72133323 None:intergenic 40.0%
! GATTCTTTGGTAACTCGATC+CGG - Chr2:72134857-72134876 MsG0280010606.01.T01:intron 40.0%
! GGCTTTCTTCTCCTTTTTGT+GGG + Chr2:72136592-72136611 None:intergenic 40.0%
! GTTATCACACTAGTCTCATG+GGG - Chr2:72134236-72134255 MsG0280010606.01.T01:intron 40.0%
! TCGGTAAGTGTGGTTTTCTA+AGG + Chr2:72133622-72133641 None:intergenic 40.0%
! TGCATCAAATGGAAGAGTAC+TGG + Chr2:72133708-72133727 None:intergenic 40.0%
! TGCATTTTCTCTGTTGAGCT+CGG - Chr2:72133927-72133946 MsG0280010606.01.T01:intron 40.0%
! TGGCGACCAAAATTCTAAGA+TGG - Chr2:72133425-72133444 MsG0280010606.01.T01:CDS 40.0%
! TGGCTTTCTTCTCCTTTTTG+TGG + Chr2:72136593-72136612 None:intergenic 40.0%
! TGGTTTGCCTTTGTTGTGTT+GGG - Chr2:72133245-72133264 MsG0280010606.01.T01:intron 40.0%
! TGTGTTTGGATGGAGGATTT+TGG - Chr2:72134410-72134429 MsG0280010606.01.T01:intron 40.0%
! TTTGTTGTGTTGGGTGTGAA+GGG - Chr2:72133254-72133273 MsG0280010606.01.T01:intron 40.0%
!! ATACATACCGCTGTTGTTTC+TGG - Chr2:72136141-72136160 MsG0280010606.01.T01:intron 40.0%
!! TTGGTTTGCCTTTGTTGTGT+TGG - Chr2:72133244-72133263 MsG0280010606.01.T01:intron 40.0%
!!! ACAGAACTGGTTTTGTTGTG+TGG + Chr2:72132820-72132839 None:intergenic 40.0%
!!! AGAACTGGTTTTGTTGTGTG+GGG + Chr2:72132818-72132837 None:intergenic 40.0%
!!! ATGGGGGTTTTGGAAGTATA+TGG + Chr2:72134567-72134586 None:intergenic 40.0%
!!! CAGAACTGGTTTTGTTGTGT+GGG + Chr2:72132819-72132838 None:intergenic 40.0%
!!! TGGGGGTTTTGGAAGTATAT+GGG + Chr2:72134566-72134585 None:intergenic 40.0%
!!! TTTTGGGTTTCTGACAGAAC+TGG + Chr2:72132833-72132852 None:intergenic 40.0%
AAAAAAAAAAACGGGGGGGG+GGG + Chr2:72134604-72134623 None:intergenic 45.0%
AAAGGGTAACCAACTCAGCT+TGG + Chr2:72134375-72134394 None:intergenic 45.0%
AACAGAGATTCTCCATCCCT+CGG - Chr2:72136512-72136531 MsG0280010606.01.T01:five_prime_UTR 45.0%
AAGAGGATGAGCTTAGTGTG+AGG - Chr2:72133831-72133850 MsG0280010606.01.T01:intron 45.0%
AATTACCCACAAGCATGCAC+GGG + Chr2:72136037-72136056 None:intergenic 45.0%
ACTCCAGATGTCTTAGTCCT+GGG - Chr2:72133353-72133372 MsG0280010606.01.T01:intron 45.0%
ACTGAGGCAGCTATGAATTG+AGG - Chr2:72134905-72134924 MsG0280010606.01.T01:intron 45.0%
AGAGGATGAGCTTAGTGTGA+GGG - Chr2:72133832-72133851 MsG0280010606.01.T01:intron 45.0%
AGATGGTATCAGGCATACCT+TGG - Chr2:72133442-72133461 MsG0280010606.01.T01:CDS 45.0%
AGCACAAACAACACAGACCA+AGG + Chr2:72133462-72133481 None:intergenic 45.0%
ATGTCCAATTAAGCGGCTAG+GGG + Chr2:72133224-72133243 None:intergenic 45.0%
CAAAAAAAAAAACGGGGGGG+GGG + Chr2:72134605-72134624 None:intergenic 45.0%
CAACTTTACAAGCAGGACAG+TGG - Chr2:72135745-72135764 MsG0280010606.01.T01:intron 45.0%
CCATCACATGTCATTAGAGG+AGG - Chr2:72135407-72135426 MsG0280010606.01.T01:intron 45.0%
CCGTGCAATATTGCAGATGT+AGG - Chr2:72135350-72135369 MsG0280010606.01.T01:intron 45.0%
CCTCCTCTAATGACATGTGA+TGG + Chr2:72135410-72135429 None:intergenic 45.0%
CGTAGTTCAACAATGGGAAC+TGG + Chr2:72135847-72135866 None:intergenic 45.0%
CTGATCCGTAGAGCAAAAGA+AGG - Chr2:72134096-72134115 MsG0280010606.01.T01:intron 45.0%
CTTCACACCCAACACAACAA+AGG + Chr2:72133255-72133274 None:intergenic 45.0%
GAAAACCTACACAACCGTTG+AGG - Chr2:72136679-72136698 MsG0280010606.01.T01:five_prime_UTR 45.0%
GACTTGAATGGATGTCCAAC+AGG + Chr2:72136364-72136383 None:intergenic 45.0%
GCAAAAAAAAAAACGGGGGG+GGG + Chr2:72134606-72134625 None:intergenic 45.0%
GCTTTCCAAGACGATCATAG+AGG + Chr2:72136480-72136499 None:intergenic 45.0%
GTGTAGTTCCATATGCGTGT+GGG - Chr2:72132867-72132886 MsG0280010606.01.T01:CDS 45.0%
GTTTCTGCTATGTACCACTC+TGG - Chr2:72133326-72133345 MsG0280010606.01.T01:intron 45.0%
TCCATTCATGAATGCCCTTG+CGG + Chr2:72136411-72136430 None:intergenic 45.0%
TCCCATTGTTGAACTACGAC+GGG - Chr2:72135849-72135868 MsG0280010606.01.T01:intron 45.0%
TCCTCGGCATTATTCGAGAA+AGG - Chr2:72135807-72135826 MsG0280010606.01.T01:intron 45.0%
TCCTTTCTCGAATAATGCCG+AGG + Chr2:72135811-72135830 None:intergenic 45.0%
TGGTGCAGTGAAATCCATGT+AGG - Chr2:72136337-72136356 MsG0280010606.01.T01:five_prime_UTR 45.0%
TTCCTAAGCGTGTGTTTGGA+TGG - Chr2:72134400-72134419 MsG0280010606.01.T01:intron 45.0%
TTGTTGTGTTGGGTGTGAAG+GGG - Chr2:72133255-72133274 MsG0280010606.01.T01:intron 45.0%
! CAACGGTTGTGTAGGTTTTC+TGG + Chr2:72136679-72136698 None:intergenic 45.0%
! CTTTGTTGTGTTGGGTGTGA+AGG - Chr2:72133253-72133272 MsG0280010606.01.T01:intron 45.0%
! GCCAACCAAAGAGTGTATTG+TGG + Chr2:72134006-72134025 None:intergenic 45.0%
! TAGCCCAAGAGTGTAGATGT+GGG - Chr2:72134294-72134313 MsG0280010606.01.T01:intron 45.0%
! TCGTTGTGCCTTCAGAGTTT+TGG - Chr2:72135612-72135631 MsG0280010606.01.T01:intron 45.0%
! TTAGCCCAAGAGTGTAGATG+TGG - Chr2:72134293-72134312 MsG0280010606.01.T01:intron 45.0%
! TTGTCTTTCTGGAGGGAGAA+TGG - Chr2:72133054-72133073 MsG0280010606.01.T01:CDS 45.0%
!! AATAGAAGGAAAAGCGCCGA+AGG + Chr2:72133982-72134001 None:intergenic 45.0%
!! ATAGAAGGAAAAGCGCCGAA+GGG + Chr2:72133981-72134000 None:intergenic 45.0%
!! TTGGATGGAGGATTTTGGAG+AGG - Chr2:72134415-72134434 MsG0280010606.01.T01:intron 45.0%
!! TTTTGTTGTGTGGGGAGGAA+TGG + Chr2:72132810-72132829 None:intergenic 45.0%
!!! AGGTTTTCTGGGACTTCATC+TGG + Chr2:72136667-72136686 None:intergenic 45.0%
!!! GGGGGTTTTGGAAGTATATG+GGG + Chr2:72134565-72134584 None:intergenic 45.0%
AAAAAAAAAACGGGGGGGGG+GGG + Chr2:72134603-72134622 None:intergenic 50.0%
ACACAGTCGAACATCCGCAA+GGG - Chr2:72136394-72136413 MsG0280010606.01.T01:five_prime_UTR 50.0%
AGAGAGACCGTTGATGCCAT+TGG + Chr2:72132896-72132915 None:intergenic 50.0%
AGCAATCCATTCTTTGGCGC+TGG + Chr2:72135928-72135947 None:intergenic 50.0%
AGTACTATGGGCAGAGAGTG+GGG - Chr2:72133867-72133886 MsG0280010606.01.T01:intron 50.0%
ATATGCGTGTGGGAAGCCAA+TGG - Chr2:72132877-72132896 MsG0280010606.01.T01:CDS 50.0%
CACCCCACATCTACACTCTT+GGG + Chr2:72134300-72134319 None:intergenic 50.0%
CACTCCAGATGTCTTAGTCC+TGG - Chr2:72133352-72133371 MsG0280010606.01.T01:intron 50.0%
CAGTAGGCCTATACACCCTT+CGG - Chr2:72133963-72133982 MsG0280010606.01.T01:intron 50.0%
CGTGTAGTTCCATATGCGTG+TGG - Chr2:72132866-72132885 MsG0280010606.01.T01:CDS 50.0%
CGTTATTGTTAGTCGCGGCT+GGG - Chr2:72133901-72133920 MsG0280010606.01.T01:intron 50.0%
CTAAGCGTGTGTTTGGATGG+AGG - Chr2:72134403-72134422 MsG0280010606.01.T01:intron 50.0%
CTCCAGATGTCTTAGTCCTG+GGG - Chr2:72133354-72133373 MsG0280010606.01.T01:intron 50.0%
CTCCATCCAAACACACGCTT+AGG + Chr2:72134405-72134424 None:intergenic 50.0%
GAAATCCATGTAGGCCCTGT+TGG - Chr2:72136346-72136365 MsG0280010606.01.T01:five_prime_UTR 50.0%
GAGTACTATGGGCAGAGAGT+GGG - Chr2:72133866-72133885 MsG0280010606.01.T01:intron 50.0%
GCCCGTCGTAGTTCAACAAT+GGG + Chr2:72135853-72135872 None:intergenic 50.0%
GGGCAACACCAAAACTCTGA+AGG + Chr2:72135623-72135642 None:intergenic 50.0%
GTTGAGCTCTGCATTCAAGC+TGG - Chr2:72136547-72136566 MsG0280010606.01.T01:five_prime_UTR 50.0%
TACACAGTCGAACATCCGCA+AGG - Chr2:72136393-72136412 MsG0280010606.01.T01:five_prime_UTR 50.0%
TAGTACCCGTGCATGCTTGT+GGG - Chr2:72136029-72136048 MsG0280010606.01.T01:intron 50.0%
TCACCCCACATCTACACTCT+TGG + Chr2:72134301-72134320 None:intergenic 50.0%
TCCAGATGTCTTAGTCCTGG+GGG - Chr2:72133355-72133374 MsG0280010606.01.T01:intron 50.0%
TCGTTATTGTTAGTCGCGGC+TGG - Chr2:72133900-72133919 MsG0280010606.01.T01:intron 50.0%
TGAGTACTATGGGCAGAGAG+TGG - Chr2:72133865-72133884 MsG0280010606.01.T01:intron 50.0%
TGCCCGTCGTAGTTCAACAA+TGG + Chr2:72135854-72135873 None:intergenic 50.0%
TGGGAAGCCAATGGCATCAA+CGG - Chr2:72132886-72132905 MsG0280010606.01.T01:CDS 50.0%
! AGCCCAAGAGTGTAGATGTG+GGG - Chr2:72134295-72134314 MsG0280010606.01.T01:intron 50.0%
! ATTGGCTTCCCACACGCATA+TGG + Chr2:72132878-72132897 None:intergenic 50.0%
! CTTCTAAAGGGCACGGGTTT+CGG - Chr2:72133539-72133558 MsG0280010606.01.T01:five_prime_UTR 50.0%
!! AAAAGCGCCGAAGGGTGTAT+AGG + Chr2:72133973-72133992 None:intergenic 50.0%
!! TCCGCAAGGGCATTCATGAA+TGG - Chr2:72136407-72136426 MsG0280010606.01.T01:five_prime_UTR 50.0%
!!! ACTGGTTTTGTTGTGTGGGG+AGG + Chr2:72132815-72132834 None:intergenic 50.0%
!!! GCTGGCATTGGTTTTCTCCT+TGG + Chr2:72135910-72135929 None:intergenic 50.0%
AAAAAAAAACGGGGGGGGGG+GGG + Chr2:72134602-72134621 None:intergenic 55.0%
AACATAGGCCTCCACACCGT+GGG + Chr2:72133765-72133784 None:intergenic 55.0%
ACCCCCAGGACTAAGACATC+TGG + Chr2:72133359-72133378 None:intergenic 55.0%
ACGGTGTGGAGGCCTATGTT+AGG - Chr2:72133765-72133784 MsG0280010606.01.T01:intron 55.0%
ATGCAGAGCTCAACCACTGC+TGG + Chr2:72136541-72136560 None:intergenic 55.0%
ATGTCTTAGTCCTGGGGGTG+AGG - Chr2:72133360-72133379 MsG0280010606.01.T01:intron 55.0%
CAACCACTGCTGGAATCCGA+GGG + Chr2:72136531-72136550 None:intergenic 55.0%
CCAATGCCAGCGCCAAAGAA+TGG - Chr2:72135919-72135938 MsG0280010606.01.T01:intron 55.0%
GATGTCCAACAGGGCCTACA+TGG + Chr2:72136354-72136373 None:intergenic 55.0%
GGCTAGGGGAGACGCAATAA+AGG + Chr2:72133210-72133229 None:intergenic 55.0%
GTAGTACCCGTGCATGCTTG+TGG - Chr2:72136028-72136047 MsG0280010606.01.T01:intron 55.0%
GTCTCCCCTAGCCGCTTAAT+TGG - Chr2:72133217-72133236 MsG0280010606.01.T01:intron 55.0%
GTTGAGCTCGGATCAGCTCT+GGG - Chr2:72133939-72133958 MsG0280010606.01.T01:intron 55.0%
GTTGTGTGGGGAGGAATGGA+TGG + Chr2:72132806-72132825 None:intergenic 55.0%
TAACATAGGCCTCCACACCG+TGG + Chr2:72133766-72133785 None:intergenic 55.0%
TCAACCACTGCTGGAATCCG+AGG + Chr2:72136532-72136551 None:intergenic 55.0%
TGAACTACGACGGGCAGCTA+GGG - Chr2:72135858-72135877 MsG0280010606.01.T01:intron 55.0%
TGCTTTAGCAGTGCAGCCCA+CGG - Chr2:72133746-72133765 MsG0280010606.01.T01:intron 55.0%
TGTTGAGCTCGGATCAGCTC+TGG - Chr2:72133938-72133957 MsG0280010606.01.T01:intron 55.0%
TTGAACTACGACGGGCAGCT+AGG - Chr2:72135857-72135876 MsG0280010606.01.T01:intron 55.0%
! CATCTGGAGTGTGACCAGAG+TGG + Chr2:72133343-72133362 None:intergenic 55.0%
!! CCATTCTTTGGCGCTGGCAT+TGG + Chr2:72135922-72135941 None:intergenic 55.0%
AAAAAAAACGGGGGGGGGGG+GGG + Chr2:72134601-72134620 None:intergenic 60.0%
CACTGCTGGAATCCGAGGGA+TGG + Chr2:72136527-72136546 None:intergenic 60.0%
CATCCCTCGGATTCCAGCAG+TGG - Chr2:72136525-72136544 MsG0280010606.01.T01:five_prime_UTR 60.0%
TGGTAACACACCTCACCCCC+AGG + Chr2:72133373-72133392 None:intergenic 60.0%
!! CGGATCAGCTCTGGGACAGT+AGG - Chr2:72133947-72133966 MsG0280010606.01.T01:intron 60.0%
AAAAAAACGGGGGGGGGGGG+GGG + Chr2:72134600-72134619 None:intergenic 65.0%
TACGACGGGCAGCTAGGGAG+AGG - Chr2:72135863-72135882 MsG0280010606.01.T01:intron 65.0%
TAGCAGTGCAGCCCACGGTG+TGG - Chr2:72133751-72133770 MsG0280010606.01.T01:intron 65.0%
AAAAAACGGGGGGGGGGGGG+GGG + Chr2:72134599-72134618 None:intergenic 70.0%
CAGTGCAGCCCACGGTGTGG+AGG - Chr2:72133754-72133773 MsG0280010606.01.T01:intron 70.0%
! GGGGGGGTGGATGGGGGTTT+TGG + Chr2:72134577-72134596 None:intergenic 70.0%
AAAAACGGGGGGGGGGGGGG+GGG + Chr2:72134598-72134617 None:intergenic 75.0%
! AAAACGGGGGGGGGGGGGGG+GGG + Chr2:72134597-72134616 None:intergenic 80.0%
! AAACGGGGGGGGGGGGGGGG+GGG + Chr2:72134596-72134615 None:intergenic 85.0%
! GGGGGGGGGGGGGGGTGGAT+GGG + Chr2:72134585-72134604 None:intergenic 85.0%
! GGGGGGGGGGGGGGTGGATG+GGG + Chr2:72134584-72134603 None:intergenic 85.0%
! GGGGGGGGGGGGGTGGATGG+GGG + Chr2:72134583-72134602 None:intergenic 85.0%
! AACGGGGGGGGGGGGGGGGG+GGG + Chr2:72134595-72134614 None:intergenic 90.0%
! GGGGGGGGGGGGGGGGTGGA+TGG + Chr2:72134586-72134605 None:intergenic 90.0%
! ACGGGGGGGGGGGGGGGGGG+GGG + Chr2:72134594-72134613 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
Chr2 gene 72132750 72136699 72132750 ID=MsG0280010606.01;Name=MsG0280010606.01
Chr2 mRNA 72132750 72136699 72132750 ID=MsG0280010606.01.T01;Parent=MsG0280010606.01;Name=MsG0280010606.01.T01;_AED=0.31;_eAED=0.31;_QI=579|1|1|1|0.5|0.33|3|0|146
Chr2 exon 72132750 72133113 72132750 ID=MsG0280010606.01.T01:exon:6996;Parent=MsG0280010606.01.T01
Chr2 exon 72133399 72133689 72133399 ID=MsG0280010606.01.T01:exon:6995;Parent=MsG0280010606.01.T01
Chr2 exon 72136335 72136699 72136335 ID=MsG0280010606.01.T01:exon:6994;Parent=MsG0280010606.01.T01
Chr2 five_prime_UTR 72136335 72136699 72136335 ID=MsG0280010606.01.T01:five_prime_utr;Parent=MsG0280010606.01.T01
Chr2 five_prime_UTR 72133476 72133689 72133476 ID=MsG0280010606.01.T01:five_prime_utr;Parent=MsG0280010606.01.T01
Chr2 CDS 72133399 72133475 72133399 ID=MsG0280010606.01.T01:cds;Parent=MsG0280010606.01.T01
Chr2 CDS 72132750 72133113 72132750 ID=MsG0280010606.01.T01:cds;Parent=MsG0280010606.01.T01
Gene Sequence

>MsG0280010606.01.T01

ATGATGTATAATGCTAGGATCACTTTGATTAATAATTTGAAAAAGCTGCTCAAAGTAGTACCCGTGCATGCTTGTGGGTGGTGCAGTGAAATCCATGTAGGCCCTGTTGGACATCCATTCAAGTCATGTAAAGGTACACAGTCGAACATCCGCAAGGGCATTCATGAATGGACAAATGCACATGTGGAAGACATATTAATACCGATTGACGCATTTCACCTCTATGATCGTCTTGGAAAGCGGATTACTCATGAACAGAGATTCTCCATCCCTCGGATTCCAGCAGTGGTTGAGCTCTGCATTCAAGCTGGCGTTAAAATTCGAGAGTTTCCCACAAAAAGGAGAAGAAAGCCAATAATCCGTATTGGGAAGAAGGAATTTGTGGATGCTGATGAAAGTGAACTACCAGATGAAGTCCCAGAAAACCTACACAACCGTTGA

Protein sequence

>MsG0280010606.01.T01

MMYNARITLINNLKKLLKVVPVHACGWCSEIHVGPVGHPFKSCKGTQSNIRKGIHEWTNAHVEDILIPIDAFHLYDRLGKRITHEQRFSIPRIPAVVELCIQAGVKIREFPTKRRRKPIIRIGKKEFVDADESELPDEVPENLHNR*