AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0577820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0577820 MtrunA17_Chr8g0377731 91.308 1162 47 7 1 1112 1 1158 0.0 2145
Msa0577820 MtrunA17_Chr3g0122121 62.592 1219 321 20 20 1112 37 1246 0.0 1418
Msa0577820 MtrunA17_Chr3g0101021 33.446 1181 601 29 2 1103 22 1096 6.88e-172 535
Msa0577820 MtrunA17_Chr5g0445211 33.361 1223 615 31 2 1103 6 1149 4.58e-165 518
Msa0577820 MtrunA17_Chr4g0045381 42.993 421 172 10 54 420 193 599 2.01e-85 305
Msa0577820 MtrunA17_Chr4g0045381 33.562 146 97 0 657 802 621 766 1.91e-15 82.0
Msa0577820 MtrunA17_Chr4g0069141 41.146 384 168 7 52 383 151 528 4.06e-80 289
Msa0577820 MtrunA17_Chr4g0069141 31.016 187 118 2 645 821 566 751 3.06e-13 74.7
Msa0577820 MtrunA17_Chr2g0322291 41.425 379 164 7 52 378 86 458 8.97e-79 283
Msa0577820 MtrunA17_Chr4g0053211 32.170 401 177 11 55 373 13 400 8.62e-46 179
Msa0577820 MtrunA17_Chr1g0182151 31.325 415 197 12 28 377 33 424 1.56e-42 169
Msa0577820 MtrunA17_Chr1g0178411 31.122 392 191 10 55 381 14 391 1.73e-42 169
Msa0577820 MtrunA17_Chr1g0152231 30.569 422 212 10 57 425 6 399 2.52e-42 167
Msa0577820 MtrunA17_Chr7g0266631 31.378 392 190 10 55 381 10 387 1.42e-41 166
Msa0577820 MtrunA17_Chr3g0132921 29.925 401 194 10 49 380 4 386 8.32e-41 158
Msa0577820 MtrunA17_Chr2g0327581 30.256 390 192 9 55 381 50 422 1.11e-40 163
Msa0577820 MtrunA17_Chr1g0153061 30.750 400 186 11 52 373 6 392 1.52e-40 162
Msa0577820 MtrunA17_Chr1g0193221 33.166 398 196 12 55 403 4 380 2.03e-40 162
Msa0577820 MtrunA17_Chr5g0427481 29.716 387 194 9 83 404 49 422 1.28e-39 160
Msa0577820 MtrunA17_Chr3g0134191 30.151 398 185 10 55 373 9 392 4.91e-39 157
Msa0577820 MtrunA17_Chr1g0192481 32.447 376 185 10 55 377 59 418 3.08e-38 152
Msa0577820 MtrunA17_Chr3g0145071 30.130 385 197 11 43 377 88 450 4.31e-38 155
Msa0577820 MtrunA17_Chr8g0369881 30.914 372 184 11 55 375 876 1225 1.98e-37 153
Msa0577820 MtrunA17_Chr1g0195111 30.585 376 187 8 55 375 397 753 1.46e-36 150
Msa0577820 MtrunA17_Chr4g0035661 30.000 380 193 12 48 377 84 440 2.07e-36 149
Msa0577820 MtrunA17_Chr3g0102921 29.273 509 269 18 53 494 437 921 4.13e-36 149
Msa0577820 MtrunA17_Chr2g0280421 31.579 361 170 11 39 342 423 763 9.53e-36 146
Msa0577820 MtrunA17_Chr2g0319271 31.956 363 151 11 55 344 400 739 3.88e-35 144
Msa0577820 MtrunA17_Chr5g0407791 30.769 325 165 7 92 375 934 1239 5.10e-35 145
Msa0577820 MtrunA17_Chr5g0405181 30.971 381 212 12 55 393 21 392 1.10e-34 144
Msa0577820 MtrunA17_Chr7g0271961 30.831 373 185 12 55 375 402 753 2.09e-34 143
Msa0577820 MtrunA17_Chr4g0049011 30.239 377 172 12 39 346 265 619 2.20e-34 140
Msa0577820 MtrunA17_Chr2g0307481 29.314 423 205 14 24 375 38 437 5.05e-34 139
Msa0577820 MtrunA17_Chr7g0258991 28.496 379 189 12 55 377 74 426 5.29e-34 141
Msa0577820 MtrunA17_Chr5g0447041 26.102 567 308 18 55 528 435 983 6.83e-34 141
Msa0577820 MtrunA17_Chr4g0042061 30.952 378 165 12 39 344 418 771 9.13e-34 140
Msa0577820 MtrunA17_Chr4g0062291 31.198 359 163 10 53 349 122 458 2.92e-33 138
Msa0577820 MtrunA17_Chr4g0036001 29.474 380 216 9 55 394 25 392 1.50e-32 136
Msa0577820 MtrunA17_Chr8g0372171 29.888 358 186 8 78 393 56 390 8.15e-32 134
Msa0577820 MtrunA17_Chr5g0398521 29.268 410 197 14 11 347 13 402 1.15e-31 134
Msa0577820 MtrunA17_Chr1g0191851 31.921 354 166 13 55 354 148 480 1.90e-31 132
Msa0577820 MtrunA17_Chr6g0483701 28.767 365 214 6 55 383 31 385 1.07e-30 130
Msa0577820 MtrunA17_Chr2g0312631 30.347 346 165 12 55 345 385 709 1.07e-30 131
Msa0577820 MtrunA17_Chr7g0245931 29.126 412 207 14 12 353 6 402 2.68e-29 126
Msa0577820 MtrunA17_Chr3g0142261 32.063 315 175 9 90 377 67 369 4.13e-29 126
Msa0577820 MtrunA17_Chr6g0485471 29.326 341 173 10 55 345 116 438 7.67e-29 124
Msa0577820 MtrunA17_Chr5g0411971 28.933 356 173 10 90 387 444 777 2.47e-28 123
Msa0577820 MtrunA17_Chr4g0070001 27.970 404 220 11 7 354 82 470 2.52e-28 123
Msa0577820 MtrunA17_Chr7g0257301 27.649 387 204 9 55 373 393 771 2.55e-28 123
Msa0577820 MtrunA17_Chr2g0331761 27.778 378 203 11 18 345 151 508 4.97e-28 121
Msa0577820 MtrunA17_Chr7g0272871 30.056 356 170 13 55 354 128 460 5.25e-28 121
Msa0577820 MtrunA17_Chr1g0191181 28.902 346 174 9 55 347 89 415 7.66e-28 120
Msa0577820 MtrunA17_Chr5g0421591 31.104 299 142 8 90 345 419 696 2.22e-27 120
Msa0577820 MtrunA17_Chr5g0421521 28.933 356 173 10 90 387 419 752 2.42e-27 120
Msa0577820 MtrunA17_Chr7g0238581 27.749 382 186 15 23 347 5 353 8.09e-26 114
Msa0577820 MtrunA17_Chr3g0122291 72.131 61 17 0 665 725 1 61 2.97e-23 94.0
Msa0577820 MtrunA17_Chr8g0367581 28.165 387 197 14 37 374 131 485 9.21e-23 105
Msa0577820 MtrunA17_Chr7g0269681 33.624 229 119 4 173 375 2 223 2.47e-22 102
Msa0577820 MtrunA17_Chr3g0122271 56.627 83 31 1 902 984 1 78 6.05e-21 88.6
Msa0577820 MtrunA17_Chr8g0386891 33.333 189 95 3 212 375 4 186 6.78e-20 94.0
Msa0577820 MtrunA17_Chr8g0390981 37.398 123 60 4 55 168 516 630 6.71e-14 76.3
Msa0577820 MtrunA17_Chr8g0390991 31.863 204 91 6 212 378 1 193 9.45e-14 75.5
Msa0577820 MtrunA17_Chr6g0484501 32.161 199 104 3 200 373 22 214 2.57e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0577820 AT3G23670.1 51.274 667 293 11 462 1112 663 1313 0.0 620
Msa0577820 AT3G23670.1 59.000 500 122 10 10 428 23 520 4.16e-168 531
Msa0577820 AT4G14150.1 52.545 668 290 7 451 1112 646 1292 0.0 609
Msa0577820 AT4G14150.1 57.171 516 129 13 3 428 1 514 9.15e-164 519
Msa0577820 AT3G23670.2 59.000 500 122 10 10 428 23 520 7.07e-172 531
Msa0577820 AT3G23670.2 54.706 340 131 7 780 1112 648 971 4.02e-99 337
Msa0577820 AT3G20150.1 31.566 1207 535 33 10 1063 33 1101 6.55e-136 440
Msa0577820 AT3G20150.2 31.493 1159 504 32 10 1015 33 1054 2.38e-133 432
Msa0577820 AT3G19050.1 44.022 368 148 7 52 367 191 552 1.96e-82 296
Msa0577820 AT3G19050.1 39.161 143 87 0 650 792 618 760 9.10e-21 100
Msa0577820 AT3G17360.1 41.667 384 166 7 42 373 156 533 4.03e-78 283
Msa0577820 AT3G17360.1 31.298 131 90 0 657 787 584 714 3.62e-12 71.6
Msa0577820 AT3G17360.3 41.667 384 166 7 42 373 156 533 4.20e-78 283
Msa0577820 AT3G17360.3 31.298 131 90 0 657 787 584 714 3.72e-12 71.6
Msa0577820 AT3G17360.2 41.667 384 166 7 42 373 156 533 4.63e-78 283
Msa0577820 AT3G17360.2 31.298 131 90 0 657 787 592 722 3.63e-12 71.6
Msa0577820 AT3G44050.1 41.732 381 164 7 52 380 91 465 2.17e-74 270
Msa0577820 AT5G55520.1 29.502 783 379 22 322 1056 92 749 6.41e-62 227
Msa0577820 AT5G55520.2 29.135 786 374 22 322 1056 92 745 1.17e-60 223
Msa0577820 AT4G26660.1 28.734 790 397 25 325 1067 96 766 5.86e-59 218
Msa0577820 AT3G63480.2 34.084 311 144 8 90 354 48 343 8.32e-43 163
Msa0577820 AT2G37420.1 31.579 418 198 13 30 377 18 417 2.12e-42 169
Msa0577820 AT2G37420.2 31.579 418 198 13 30 377 18 417 2.12e-42 169
Msa0577820 AT5G60930.3 32.507 363 158 9 85 373 40 389 2.17e-42 169
Msa0577820 AT2G28620.1 31.105 389 190 9 55 381 51 423 2.48e-42 169
Msa0577820 AT2G28620.3 31.105 389 190 9 55 381 51 423 2.52e-42 169
Msa0577820 AT2G28620.2 31.105 389 190 9 55 381 51 423 2.52e-42 169
Msa0577820 AT5G60930.2 31.139 395 184 10 55 373 7 389 2.64e-42 169
Msa0577820 AT2G36200.1 31.296 409 184 12 47 381 5 390 2.72e-42 169
Msa0577820 AT5G60930.1 32.507 363 158 9 85 373 40 389 3.71e-42 169
Msa0577820 AT2G36200.2 31.296 409 184 12 47 381 5 390 4.30e-42 168
Msa0577820 AT3G45850.2 31.969 391 184 10 55 381 56 428 6.25e-42 167
Msa0577820 AT3G45850.1 31.969 391 184 10 55 381 56 428 6.25e-42 167
Msa0577820 AT3G63480.1 33.968 315 143 10 90 354 48 347 1.06e-41 160
Msa0577820 AT5G47820.2 30.414 411 190 12 52 380 9 405 2.43e-41 166
Msa0577820 AT5G47820.1 30.414 411 190 12 52 380 9 405 2.43e-41 166
Msa0577820 AT1G59540.1 31.111 405 218 9 57 419 6 391 6.58e-41 163
Msa0577820 AT4G39050.1 30.905 398 202 12 30 377 75 449 7.21e-41 164
Msa0577820 AT3G10180.1 31.783 387 186 9 55 388 4 365 2.33e-39 160
Msa0577820 AT3G10180.2 31.783 387 186 9 55 388 4 365 2.35e-39 159
Msa0577820 AT3G50240.4 30.326 399 183 12 55 373 26 409 3.27e-39 159
Msa0577820 AT3G50240.1 30.326 399 183 12 55 373 26 409 3.56e-39 159
Msa0577820 AT3G50240.2 30.326 399 183 12 55 373 26 409 4.35e-39 158
Msa0577820 AT5G06670.8 29.280 403 207 11 28 383 53 424 4.92e-39 156
Msa0577820 AT5G06670.4 29.280 403 207 11 28 383 53 424 4.92e-39 156
Msa0577820 AT5G06670.7 29.280 403 207 11 28 383 53 424 4.92e-39 156
Msa0577820 AT5G06670.5 29.280 403 207 11 28 383 53 424 5.98e-39 156
Msa0577820 AT5G06670.2 29.280 403 207 11 28 383 53 424 7.00e-39 157
Msa0577820 AT5G06670.3 29.280 403 207 11 28 383 53 424 7.00e-39 157
Msa0577820 AT3G10310.2 32.796 372 179 15 55 373 364 717 3.13e-37 152
Msa0577820 AT3G12020.4 28.989 376 199 10 51 377 66 422 4.16e-37 152
Msa0577820 AT3G12020.1 28.989 376 199 10 51 377 66 422 4.16e-37 152
Msa0577820 AT3G10310.1 32.796 372 179 15 55 373 364 717 4.33e-37 152
Msa0577820 AT2G21380.2 29.551 379 195 11 49 377 99 455 7.51e-37 151
Msa0577820 AT2G21380.1 29.551 379 195 11 49 377 99 455 7.51e-37 151
Msa0577820 AT3G12020.3 29.459 370 205 10 51 377 66 422 1.46e-36 150
Msa0577820 AT3G12020.2 29.459 370 205 10 51 377 66 422 1.46e-36 150
Msa0577820 AT1G63640.2 29.136 405 215 12 55 404 473 860 1.51e-36 150
Msa0577820 AT1G18410.1 31.880 367 187 14 55 375 633 982 1.54e-36 150
Msa0577820 AT5G41310.1 30.312 353 193 9 55 371 423 758 1.98e-36 149
Msa0577820 AT5G06670.6 28.641 412 207 12 28 383 53 433 1.98e-36 150
Msa0577820 AT5G06670.1 28.641 412 207 12 28 383 53 433 1.98e-36 150
Msa0577820 AT1G21730.1 29.032 372 196 9 55 377 76 428 2.95e-36 149
Msa0577820 AT1G73860.1 30.585 376 189 12 55 375 510 868 4.31e-36 149
Msa0577820 AT1G18410.3 30.933 375 188 14 55 375 490 847 7.81e-36 148
Msa0577820 AT1G18410.2 30.933 375 188 14 55 375 490 847 7.81e-36 148
Msa0577820 AT1G73860.2 30.585 376 189 12 55 375 427 785 9.39e-36 147
Msa0577820 AT5G54670.3 31.183 372 169 11 39 344 322 672 9.42e-36 146
Msa0577820 AT1G09170.5 32.527 372 184 9 55 375 435 790 1.01e-35 147
Msa0577820 AT5G54670.1 31.183 372 169 11 39 344 382 732 1.35e-35 146
Msa0577820 AT5G54670.2 31.183 372 169 11 39 344 382 732 1.35e-35 146
Msa0577820 AT1G18410.4 30.933 375 188 14 55 375 633 990 1.38e-35 147
Msa0577820 AT1G09170.4 32.527 372 184 9 55 375 435 790 1.46e-35 146
Msa0577820 AT4G27180.1 31.903 373 165 12 39 344 373 723 1.50e-35 145
Msa0577820 AT4G27180.2 31.903 373 165 12 39 344 373 723 1.50e-35 145
Msa0577820 AT1G09170.3 31.903 373 180 10 55 376 435 784 1.83e-35 146
Msa0577820 AT1G09170.7 31.903 373 180 10 55 376 435 784 1.83e-35 146
Msa0577820 AT4G05190.1 30.933 375 170 10 39 344 414 768 1.84e-35 145
Msa0577820 AT1G18410.5 31.351 370 189 15 55 376 480 832 1.97e-35 146
Msa0577820 AT1G63640.3 28.641 412 215 12 55 404 473 867 2.30e-35 146
Msa0577820 AT1G63640.5 28.641 412 215 12 55 404 463 857 2.30e-35 146
Msa0577820 AT1G63640.1 28.641 412 215 12 55 404 473 867 2.50e-35 146
Msa0577820 AT1G63640.4 28.641 412 215 12 55 404 473 867 2.50e-35 146
Msa0577820 AT1G09170.2 32.527 372 184 9 55 375 435 790 2.68e-35 145
Msa0577820 AT2G47500.1 30.749 374 187 9 55 375 400 754 2.93e-35 146
Msa0577820 AT2G47500.2 30.749 374 187 9 55 375 400 754 3.35e-35 145
Msa0577820 AT4G05190.2 30.933 375 170 10 39 344 401 755 3.36e-35 145
Msa0577820 AT5G27000.1 31.806 371 189 10 55 375 395 751 4.66e-35 145
Msa0577820 AT1G09170.1 33.053 357 166 10 55 375 435 754 6.34e-35 145
Msa0577820 AT5G65930.1 32.660 297 141 7 92 347 932 1210 1.26e-34 144
Msa0577820 AT5G65930.2 32.660 297 141 7 92 347 933 1211 1.37e-34 144
Msa0577820 AT5G65930.3 32.660 297 141 7 92 347 939 1217 1.57e-34 144
Msa0577820 AT4G21270.1 30.133 375 173 10 39 344 417 771 9.28e-34 140
Msa0577820 AT2G22610.3 29.765 383 200 10 40 372 404 767 2.86e-33 140
Msa0577820 AT2G22610.1 29.765 383 200 10 40 372 403 766 2.98e-33 140
Msa0577820 AT2G22610.2 29.765 383 200 10 40 372 403 766 3.28e-33 139
Msa0577820 AT3G44730.2 30.526 380 182 12 55 378 423 776 2.06e-32 137
Msa0577820 AT3G44730.3 30.526 380 182 12 55 378 423 776 2.06e-32 137
Msa0577820 AT3G44730.1 30.526 380 182 12 55 378 378 731 2.27e-32 137
Msa0577820 AT3G44730.4 30.526 380 182 12 55 378 378 731 2.27e-32 137
Msa0577820 AT5G66310.2 29.716 387 213 12 55 399 19 388 1.51e-31 134
Msa0577820 AT5G66310.3 29.716 387 213 12 55 399 19 388 1.51e-31 134
Msa0577820 AT5G66310.1 29.716 387 213 12 55 399 19 388 1.51e-31 134
Msa0577820 AT3G51150.1 30.831 373 198 14 55 383 18 374 2.43e-31 133
Msa0577820 AT3G51150.2 30.831 373 198 14 55 383 18 374 2.56e-31 133
Msa0577820 AT3G51150.4 30.831 373 198 14 55 383 18 374 2.56e-31 133
Msa0577820 AT3G51150.3 30.831 373 198 14 55 383 18 374 2.56e-31 133
Msa0577820 AT2G21300.2 30.994 342 157 11 90 384 71 380 1.15e-30 131
Msa0577820 AT2G21300.4 30.994 342 157 11 90 384 71 380 1.15e-30 131
Msa0577820 AT2G21300.3 30.994 342 157 11 90 384 71 380 1.15e-30 131
Msa0577820 AT2G21300.1 30.994 342 157 11 90 384 71 380 1.15e-30 131
Msa0577820 AT2G21300.5 30.994 342 157 11 90 384 71 380 1.15e-30 131
Msa0577820 AT4G24170.1 31.003 329 189 7 90 390 50 368 1.26e-30 131
Msa0577820 AT4G24170.2 31.003 329 189 7 90 390 50 368 1.26e-30 131
Msa0577820 AT1G55550.1 30.836 347 157 12 55 345 92 411 1.99e-30 130
Msa0577820 AT1G18550.1 31.129 363 157 13 50 346 147 482 2.42e-30 129
Msa0577820 AT4G38950.3 31.099 373 197 13 55 384 14 369 2.59e-30 130
Msa0577820 AT4G38950.5 31.099 373 197 13 55 384 14 369 2.59e-30 130
Msa0577820 AT4G38950.4 31.099 373 197 13 55 384 14 369 2.59e-30 130
Msa0577820 AT4G38950.1 31.099 373 197 13 55 384 14 369 2.59e-30 130
Msa0577820 AT4G38950.2 31.099 373 197 13 55 384 14 369 2.59e-30 130
Msa0577820 AT3G54870.1 31.034 348 161 13 66 353 121 449 2.91e-30 130
Msa0577820 AT3G54870.3 31.034 348 161 13 66 353 121 449 2.98e-30 130
Msa0577820 AT3G54870.2 31.034 348 161 13 66 353 121 449 3.90e-30 129
Msa0577820 AT5G27550.2 32.343 303 139 11 90 347 177 458 3.93e-30 129
Msa0577820 AT5G27550.1 32.343 303 139 11 90 347 177 458 3.93e-30 129
Msa0577820 AT1G72250.2 29.067 375 189 11 55 373 501 854 4.29e-30 129
Msa0577820 AT1G18370.1 27.882 373 219 8 50 384 27 387 4.31e-30 129
Msa0577820 AT1G72250.4 29.067 375 189 11 55 373 512 865 5.13e-30 129
Msa0577820 AT1G72250.3 29.067 375 189 11 55 373 513 866 5.18e-30 129
Msa0577820 AT1G72250.1 29.067 375 189 11 55 373 492 845 5.65e-30 129
Msa0577820 AT1G59540.2 35.433 254 129 5 192 419 55 299 7.88e-30 127
Msa0577820 AT3G50240.3 30.503 318 134 9 130 373 3 307 9.64e-30 128
Msa0577820 AT5G27950.1 29.052 327 162 8 86 364 115 419 1.56e-29 126
Msa0577820 AT1G01950.2 27.937 383 197 11 38 353 40 410 9.32e-28 122
Msa0577820 AT1G01950.1 27.937 383 197 11 38 353 40 410 9.59e-28 122
Msa0577820 AT1G12430.2 29.282 362 181 11 55 353 71 420 1.14e-27 121
Msa0577820 AT1G12430.1 29.282 362 181 11 55 353 71 420 1.22e-27 121
Msa0577820 AT1G01950.3 27.937 383 197 11 38 353 40 410 1.56e-27 121
Msa0577820 AT3G43210.3 29.268 328 194 5 90 391 74 389 1.03e-25 115
Msa0577820 AT3G43210.5 29.268 328 194 5 90 391 74 389 1.03e-25 115
Msa0577820 AT3G43210.2 29.268 328 194 5 90 391 74 389 1.03e-25 115
Msa0577820 AT3G43210.4 29.268 328 194 5 90 391 74 389 1.03e-25 115
Msa0577820 AT3G43210.1 29.268 328 194 5 90 391 74 389 1.03e-25 115
Msa0577820 AT1G09170.6 31.494 308 144 9 55 311 435 726 1.13e-25 114
Msa0577820 AT1G09170.8 31.494 308 144 9 55 311 435 726 1.13e-25 114
Msa0577820 AT3G16060.1 27.174 368 184 12 55 364 170 511 1.41e-25 114
Msa0577820 AT3G16630.2 27.933 358 166 13 55 345 194 526 6.22e-25 112
Msa0577820 AT3G16630.1 27.933 358 166 13 55 345 194 526 6.22e-25 112
Msa0577820 AT3G49650.1 30.225 311 141 9 120 379 95 380 1.26e-24 111
Msa0577820 AT5G02370.1 27.027 370 186 13 38 352 7 347 1.28e-23 107
Msa0577820 AT5G65460.3 28.974 390 210 13 37 377 123 494 3.43e-22 104
Msa0577820 AT3G51150.5 34.742 213 99 7 201 383 19 221 6.31e-22 103
Msa0577820 AT5G65460.1 28.718 390 204 13 37 377 123 487 9.33e-22 102
Msa0577820 AT5G65460.2 28.718 390 204 13 37 377 123 487 9.70e-22 102
Msa0577820 AT5G65460.4 28.718 390 204 13 37 377 123 487 9.91e-22 102
Msa0577820 AT5G65460.6 28.718 390 204 13 37 377 123 487 1.48e-21 102
Msa0577820 AT5G10470.2 27.179 390 195 14 37 373 127 480 3.37e-17 88.2
Msa0577820 AT5G10470.1 27.179 390 195 14 37 373 127 480 3.61e-17 87.8
Msa0577820 AT5G27950.2 27.132 258 130 6 155 364 6 253 1.33e-16 84.3
Msa0577820 AT1G01950.4 29.537 281 133 9 126 353 1 269 1.67e-16 85.5
Msa0577820 AT5G42490.1 28.502 207 107 4 90 278 56 239 1.45e-14 79.3
Msa0577820 AT5G42490.2 28.502 207 107 4 90 278 56 239 1.48e-14 79.3

Find 212 sgRNAs with CRISPR-Local

Find 473 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCAGAATTTCTATGAATT+TGG 0.125394 4_1:-82117513 Msa0577820:CDS
TAAGGAAATTTGAAGCTTTC+AGG 0.147100 4_1:+82118450 None:intergenic
TTGTGCTTATGCGTTGATTT+AGG 0.183501 4_1:+82122961 None:intergenic
GCACTGTCTTCAGTTGATTC+TGG 0.186215 4_1:+82117297 None:intergenic
CAGAGCCATTTCTCTCCTTA+TGG 0.211217 4_1:+82117987 None:intergenic
ACTTTGAGAACTTGCTTCTT+TGG 0.221568 4_1:+82118116 None:intergenic
CACCATTGCAGCGCAGCTTT+TGG 0.243281 4_1:-82118371 Msa0577820:CDS
ATCTTCATCTTCAGAACTTC+TGG 0.244162 4_1:+82117570 None:intergenic
GCTCGAATTGCCGAGAATTC+TGG 0.250931 4_1:+82118757 None:intergenic
ATCAGAATTTCTATGAATTT+GGG 0.252101 4_1:-82117512 Msa0577820:CDS
CAATTTATCAATTTGTTTGT+AGG 0.260681 4_1:+82115620 None:intergenic
TGCACTTCTTACTGCTGTTC+TGG 0.269679 4_1:+82116975 None:intergenic
AATTGATACCCACTTCATTT+AGG 0.269765 4_1:+82122225 None:intergenic
TTTAGAACAGTATGCAGATT+TGG 0.294458 4_1:-82117073 Msa0577820:CDS
TTCCATAGGCAAACGTGATT+TGG 0.297758 4_1:+82115551 None:intergenic
TGTGCTTATGCGTTGATTTA+GGG 0.298827 4_1:+82122962 None:intergenic
TCAACATGAGGTAGTGATAA+TGG 0.304569 4_1:+82118833 None:intergenic
TCACAGTTCATTGTAGCATT+AGG 0.306200 4_1:+82118689 None:intergenic
TTATGGTGAGAGGGAGGCTT+AGG 0.307436 4_1:+82122916 None:intergenic
AGCGCTAGCTTCGGTTGAAT+TGG 0.310305 4_1:+82117335 None:intergenic
GATTTAGGGTTTGAATTTCT+TGG 0.322901 4_1:+82122976 None:intergenic
AGGGAATGCAATGCCGTAAT+AGG 0.325356 4_1:-82117810 Msa0577820:CDS
TCAGCGCCTTCAGAGCCTTA+TGG 0.329198 4_1:-82117766 Msa0577820:CDS
TTTCTGCTGCTGCTGATTGT+TGG 0.333266 4_1:+82118596 None:intergenic
CATTGCATCCTTCAGTTCCT+TGG 0.335354 4_1:+82117125 None:intergenic
AAAGTTGGCTTGGAATCTTC+AGG 0.337311 4_1:+82118320 None:intergenic
AACAGTAATCTTCTAGTTGA+TGG 0.338073 4_1:-82115343 Msa0577820:three_prime_UTR
AGATGAAAATAGAGGGCTTC+AGG 0.347925 4_1:-82116872 Msa0577820:CDS
ATCAATCTCGTTGATTTAGC+TGG 0.354509 4_1:-82120026 Msa0577820:CDS
AGAGAAAGTAGAGTTTGAAA+TGG 0.354988 4_1:+82123083 None:intergenic
TTGAATTGGGATTGGCAGTT+AGG 0.359323 4_1:+82117349 None:intergenic
CACTGGGAGGTGGGGATTTG+AGG 0.361677 4_1:+82118624 None:intergenic
AATCTAGGTTCAGATGAATT+AGG 0.361975 4_1:+82117381 None:intergenic
CGCGTATTACTTCACGCAAT+TGG 0.362202 4_1:+82119059 None:intergenic
CACACTACCTCCTCCGATTC+CGG 0.363080 4_1:-82122865 Msa0577820:CDS
GGGAGGTGGGGATTTGAGGG+TGG 0.364669 4_1:+82118628 None:intergenic
GTTAGGTTTGCTACCAATCT+AGG 0.374279 4_1:+82117366 None:intergenic
GTTGATTGACAAAGAATTGC+TGG 0.378423 4_1:+82122677 None:intergenic
ATTAGAGAAGATGTTAAATC+TGG 0.380869 4_1:-82121832 Msa0577820:CDS
TATGGTGAGAGGGAGGCTTA+GGG 0.386979 4_1:+82122917 None:intergenic
TTCCCTTGTCTGACCTATTA+CGG 0.388662 4_1:+82117797 None:intergenic
TTCCTTGGAAAACTTCTTCT+CGG 0.388879 4_1:+82117140 None:intergenic
AACTTCAGCTCTGAGTTCTT+CGG 0.390790 4_1:+82117209 None:intergenic
GTGGGGTCCTCCCAATGCTT+TGG 0.393051 4_1:-82122318 Msa0577820:CDS
TGGGGAGAGGGAAGTGCTAA+TGG 0.393737 4_1:-82117493 Msa0577820:CDS
GAAGATCATGCCAGAATTCT+CGG 0.400093 4_1:-82118767 Msa0577820:CDS
TTCTTTGTCAATCAACGGTC+AGG 0.400841 4_1:-82122670 Msa0577820:CDS
GCGCTAGCTTCGGTTGAATT+GGG 0.402856 4_1:+82117336 None:intergenic
ATGGTGAGAGGGAGGCTTAG+GGG 0.406085 4_1:+82122918 None:intergenic
ATAGGCTGCAGAGAAAGTTT+TGG 0.408871 4_1:-82118016 Msa0577820:intron
CTAGTAGAGAATTGTTTGGC+TGG 0.411568 4_1:-82122485 Msa0577820:CDS
TGCCAAAGTAAAACTTGAAC+AGG 0.418587 4_1:-82117277 Msa0577820:CDS
CAACATGAGGTAGTGATAAT+GGG 0.424681 4_1:+82118834 None:intergenic
AGCTCTGAGTTCTTCGGAAA+GGG 0.425657 4_1:+82117215 None:intergenic
GCGGGCAATGGATGCAGAAC+AGG 0.426748 4_1:-82115655 Msa0577820:CDS
CTTGCTGAAGTTTCTCAGAC+AGG 0.427276 4_1:-82119379 Msa0577820:CDS
TGCCAAATCACGTTTGCCTA+TGG 0.428748 4_1:-82115553 Msa0577820:CDS
TTAGAACAGTCATGGTTCTC+TGG 0.430513 4_1:-82115408 Msa0577820:CDS
GGAGGTGGGGATTTGAGGGT+GGG 0.432496 4_1:+82118629 None:intergenic
GCAATAAACACAAACTTCTT+CGG 0.433375 4_1:+82118873 None:intergenic
TTCTTGCAGATGCCGGTGAA+TGG 0.433875 4_1:+82117427 None:intergenic
GCTTGCGTTTGAGAGGGTTA+TGG 0.440022 4_1:+82122899 None:intergenic
GTCCACTGGAAAAGTTGGCT+TGG 0.444668 4_1:+82118310 None:intergenic
TTGATACTTGAGTTGCTTGT+CGG 0.446475 4_1:+82122103 None:intergenic
TAATTCATCTGAACCTAGAT+TGG 0.447062 4_1:-82117379 Msa0577820:CDS
CCATCGTCTTTATTATAAGA+TGG 0.447431 4_1:+82115444 None:intergenic
CTTCATTGTGAAAGTGACTT+AGG 0.452287 4_1:-82118530 Msa0577820:CDS
GGTTGTATTGCTTCTTCCAT+AGG 0.452411 4_1:+82115537 None:intergenic
AACCACCTTGACGCCGGAAT+CGG 0.453208 4_1:+82122852 None:intergenic
GAATTAGGCAACTGCAACAA+TGG 0.453404 4_1:+82117396 None:intergenic
CTAAGTCACTTTCACAATGA+AGG 0.455974 4_1:+82118531 None:intergenic
GCAGACTCAGGGCAATCAAC+AGG 0.457682 4_1:+82118146 None:intergenic
ATTTGCTTCAGCGCTAGCTT+CGG 0.458647 4_1:+82117326 None:intergenic
GCAATGCAAATAGCTATAGA+AGG 0.465218 4_1:-82117108 Msa0577820:CDS
TTTGGTTTATCAGCAGACTC+AGG 0.468071 4_1:+82118134 None:intergenic
CAATGAAGGTTATTCTGAGA+TGG 0.471970 4_1:+82118545 None:intergenic
TTCACCGGCATCTGCAAGAA+AGG 0.472114 4_1:-82117424 Msa0577820:CDS
ATCCTAGTAGATGAAAATAG+AGG 0.476005 4_1:-82116880 Msa0577820:CDS
GGATTGTTAAACAGAACAAT+AGG 0.477436 4_1:-82120713 Msa0577820:CDS
GACGGGAATCTGAACGGAAA+TGG 0.478685 4_1:+82123043 None:intergenic
AACATGTTCAGTTGCTTGAA+AGG 0.480147 4_1:-82117044 Msa0577820:CDS
GATAATGGGTAGTGGAGTCT+AGG 0.484225 4_1:+82118848 None:intergenic
ACTTTGTCCACTGGAAAAGT+TGG 0.486624 4_1:+82118305 None:intergenic
GTTGGTGAAACACTGGGAGG+TGG 0.490392 4_1:+82118614 None:intergenic
GCCTCTAGTAGAGAATTGTT+TGG 0.492372 4_1:-82122489 Msa0577820:CDS
GGGTCCTCCCAATGCTTTGG+AGG 0.496395 4_1:-82122315 Msa0577820:CDS
AGGATCCATAAGGAGAGAAA+TGG 0.497084 4_1:-82117992 Msa0577820:CDS
GCCCAAAAGCTGCGCTGCAA+TGG 0.497965 4_1:+82118369 None:intergenic
ATGCTGAAATTTCTGCTGCA+AGG 0.501123 4_1:+82116932 None:intergenic
CTACCTCATGTTGATGAAGA+TGG 0.501402 4_1:-82118824 Msa0577820:CDS
CAAAAGCTGCGCTGCAATGG+TGG 0.501811 4_1:+82118372 None:intergenic
TGGTGAGAGGGAGGCTTAGG+GGG 0.502186 4_1:+82122919 None:intergenic
TTATATCATCAATTCCATCA+TGG 0.503479 4_1:+82117010 None:intergenic
TGGAACAATACAAGCATGAG+AGG 0.504410 4_1:-82117830 Msa0577820:CDS
TATTCCTTTCTTGCAGATGC+CGG 0.504797 4_1:+82117420 None:intergenic
CGCTCACATTGATGCTACTC+AGG 0.504941 4_1:-82122628 Msa0577820:intron
AGAGGGTTATGGTGAGAGGG+AGG 0.507922 4_1:+82122910 None:intergenic
GAGGTAGTGATAATGGGTAG+TGG 0.508035 4_1:+82118840 None:intergenic
TGATCAACAGTCTTTGTGAC+CGG 0.508243 4_1:+82118500 None:intergenic
TCCAGTGGACAAAGTTAATG+TGG 0.509331 4_1:-82118297 Msa0577820:CDS
TGCTGAAATTTCTGCTGCAA+GGG 0.509462 4_1:+82116933 None:intergenic
ATGTCACTGTTCATTTCTTG+AGG 0.510264 4_1:-82122081 Msa0577820:intron
AGAACAGTATGCAGATTTGG+AGG 0.511708 4_1:-82117070 Msa0577820:CDS
AGAAGGTGTCATCACTGCTC+AGG 0.511869 4_1:-82116779 Msa0577820:intron
TGGGTAAAACACCATCCATA+AGG 0.512730 4_1:+82117751 None:intergenic
TAGTAGAGAATTGTTTGGCT+GGG 0.512758 4_1:-82122484 Msa0577820:CDS
GTCAACTTGGAGTCCCTGTA+TGG 0.513146 4_1:+82119340 None:intergenic
TTTGAGAGGGTTATGGTGAG+AGG 0.513271 4_1:+82122906 None:intergenic
TTCGGATCAAAGCTGCTGAA+TGG 0.513866 4_1:+82118891 None:intergenic
TCAATCTCGTTGATTTAGCT+GGG 0.515149 4_1:-82120025 Msa0577820:intron
AGCTTCGGTTGAATTGGGAT+TGG 0.516854 4_1:+82117341 None:intergenic
TCTGAAGCAGTGCAAGCTGC+AGG 0.518800 4_1:-82116832 Msa0577820:CDS
CCCACATTAACTTTGTCCAC+TGG 0.522770 4_1:+82118296 None:intergenic
TTACCTCATGTTCATGAGCA+AGG 0.523622 4_1:+82117697 None:intergenic
GAGGTGGGGATTTGAGGGTG+GGG 0.523855 4_1:+82118630 None:intergenic
CACCATCCATAAGGCTCTGA+AGG 0.524408 4_1:+82117760 None:intergenic
AGATGGGGACAGCTTTGATA+AGG 0.524443 4_1:+82118562 None:intergenic
TTTCTATGAATTTGGGGAGA+GGG 0.525521 4_1:-82117505 Msa0577820:CDS
CATAAGGAGAGAAATGGCTC+TGG 0.525907 4_1:-82117986 Msa0577820:CDS
AATGAAGGTTATTCTGAGAT+GGG 0.526146 4_1:+82118546 None:intergenic
AGCAGCGGCATATACCATAC+AGG 0.526334 4_1:-82119354 Msa0577820:CDS
ACAAGTCGTTAGCTGAAAAG+AGG 0.527121 4_1:-82117179 Msa0577820:CDS
ATTAACATTGTGTGCAACCT+TGG 0.528770 4_1:+82115476 None:intergenic
ACTGGGAGGTGGGGATTTGA+GGG 0.531258 4_1:+82118625 None:intergenic
TTGAGAGGGTTATGGTGAGA+GGG 0.531566 4_1:+82122907 None:intergenic
TGAAGTAATACGCGAACTCA+AGG 0.533434 4_1:-82119050 Msa0577820:intron
TTACATATATACCTTTCCGC+AGG 0.534261 4_1:+82119256 None:intergenic
CTCCTCCGATTCCGGCGTCA+AGG 0.534301 4_1:-82122857 Msa0577820:intron
GCTGATTGTTGGTGAAACAC+TGG 0.534924 4_1:+82118607 None:intergenic
TACCTCATGTTCATGAGCAA+GGG 0.536189 4_1:+82117698 None:intergenic
AGCAATTCTTTGTCAATCAA+CGG 0.537005 4_1:-82122675 Msa0577820:CDS
GCGCTATTTCCCCTGCGGAA+AGG 0.538665 4_1:-82119267 Msa0577820:intron
TGAAGATGGCGATGAGGAGA+TGG 0.540221 4_1:-82118810 Msa0577820:CDS
GCTGCTGAATGGCCTCCACT+TGG 0.541359 4_1:+82118902 None:intergenic
CAGCTCTGAGTTCTTCGGAA+AGG 0.542049 4_1:+82117214 None:intergenic
TTTGAATTTCTTGGTACAGT+CGG 0.543649 4_1:+82122985 None:intergenic
CGTCTTAAAGAAGCAGAAGA+AGG 0.544173 4_1:-82116796 Msa0577820:CDS
CTGCATCGAGTTAAAACAAA+GGG 0.545455 4_1:-82118932 Msa0577820:CDS
TGCAGAACAGGAAGCTGCAA+AGG 0.549517 4_1:-82115643 Msa0577820:CDS
TTGGTTTATCAGCAGACTCA+GGG 0.551556 4_1:+82118135 None:intergenic
GGGAATCTGAACGGAAATGG+TGG 0.552376 4_1:+82123046 None:intergenic
TTGGTGAAACACTGGGAGGT+GGG 0.552725 4_1:+82118615 None:intergenic
TTGAACAGGAAAGAAGTGAA+TGG 0.554802 4_1:-82117263 Msa0577820:CDS
CTGATTGTTGGTGAAACACT+GGG 0.557026 4_1:+82118608 None:intergenic
TTGCTAAATTAGAACAGTCA+TGG 0.559937 4_1:-82115416 Msa0577820:CDS
AGGCATAGAAAGATCCATGA+TGG 0.561214 4_1:-82117024 Msa0577820:CDS
TCGCTCATGAATTTCTCAGT+GGG 0.562537 4_1:+82117732 None:intergenic
AGAACTTAACAGCTAGCATC+CGG 0.562969 4_1:-82118418 Msa0577820:CDS
AATTCGAGCAGAGATTGTGC+TGG 0.563990 4_1:-82118743 Msa0577820:CDS
TCATCGAGCTTGCGTTTGAG+AGG 0.565712 4_1:+82122892 None:intergenic
CCAGTGGACAAAGTTAATGT+GGG 0.567343 4_1:-82118296 Msa0577820:CDS
CACCTTGACGCCGGAATCGG+AGG 0.570107 4_1:+82122855 None:intergenic
ACTTTCGTCGATGATAATGC+TGG 0.574805 4_1:-82118266 Msa0577820:CDS
ATTTCTATGAATTTGGGGAG+AGG 0.577865 4_1:-82117506 Msa0577820:CDS
TGATCTGCAGAAGCGGGCAA+TGG 0.578529 4_1:-82115667 Msa0577820:intron
CATCGAGCTTGCGTTTGAGA+GGG 0.579039 4_1:+82122893 None:intergenic
AATGGACTGAGGCAGAAAGC+AGG 0.579246 4_1:-82117245 Msa0577820:CDS
TACATATATACCTTTCCGCA+GGG 0.582627 4_1:+82119257 None:intergenic
CAATAGTTTCAAGACCATGC+CGG 0.583413 4_1:+82118399 None:intergenic
TCCTAGTAGATGAAAATAGA+GGG 0.584197 4_1:-82116879 Msa0577820:CDS
CTTGACGCCGGAATCGGAGG+AGG 0.588019 4_1:+82122858 None:intergenic
GTGGGAAGACCTACACTATG+TGG 0.588788 4_1:-82122337 Msa0577820:CDS
TCAGAATTTCTATGAATTTG+GGG 0.590270 4_1:-82117511 Msa0577820:CDS
TGGTGAAACACTGGGAGGTG+GGG 0.590675 4_1:+82118616 None:intergenic
CGCCTTCAGAGCCTTATGGA+TGG 0.590936 4_1:-82117762 Msa0577820:CDS
GCCAAACAATTCTCTACTAG+AGG 0.595772 4_1:+82122488 None:intergenic
AATGTGAGCGATGGAATCAA+AGG 0.596797 4_1:+82122641 None:intergenic
AGTAGCATCAATGTGAGCGA+TGG 0.601308 4_1:+82122632 None:intergenic
TTCGCTCATGAATTTCTCAG+TGG 0.604397 4_1:+82117731 None:intergenic
GAGATGGAGATTGTCGAGGA+TGG 0.604971 4_1:-82118794 Msa0577820:CDS
ATGACAAGATCATTACAAGT+AGG 0.607543 4_1:+82115516 None:intergenic
TGGGAAGACCTACACTATGT+GGG 0.607786 4_1:-82122336 Msa0577820:CDS
TGTGATAACCCTGCTAGCCT+CGG 0.614800 4_1:-82118671 Msa0577820:CDS
TAGCTATAGAAGGCCATGCA+CGG 0.615029 4_1:-82117098 Msa0577820:CDS
TCGACCTCCAAAGCATTGGG+AGG 0.622884 4_1:+82122311 None:intergenic
AAGTGACTTAGGCATGATGC+CGG 0.623795 4_1:-82118519 Msa0577820:CDS
GTCCCTTGCTCATGAACATG+AGG 0.624424 4_1:-82117700 Msa0577820:intron
GGACTGAGGCAGAAAGCAGG+TGG 0.625733 4_1:-82117242 Msa0577820:CDS
TAGGCAAACGTGATTTGGCA+AGG 0.627042 4_1:+82115556 None:intergenic
AGGGCTTCAGGATCAACTGA+AGG 0.627465 4_1:-82116860 Msa0577820:CDS
ATGCCGTAATAGGTCAGACA+AGG 0.630438 4_1:-82117800 Msa0577820:CDS
ACTGTTCTAAAATCCGTGCA+TGG 0.638005 4_1:+82117085 None:intergenic
TGTTGTTGAATCTCGATGCA+AGG 0.644585 4_1:-82120639 Msa0577820:intron
GTAATAGGTCAGACAAGGGA+AGG 0.647460 4_1:-82117795 Msa0577820:CDS
GGGAGGACCCCACATAGTGT+AGG 0.651236 4_1:+82122328 None:intergenic
ACAAAGGGTTACAATCCAAG+TGG 0.653422 4_1:-82118917 Msa0577820:CDS
ATGAAGGTTATTCTGAGATG+GGG 0.655165 4_1:+82118547 None:intergenic
ACCTTGGTGTCATAATCAGT+AGG 0.655217 4_1:+82115492 None:intergenic
TTAACAGCTAGCATCCGGCA+TGG 0.656368 4_1:-82118413 Msa0577820:CDS
GGAACAATACAAGCATGAGA+GGG 0.657184 4_1:-82117829 Msa0577820:CDS
GGAGCTTTCAGAATTTACAC+TGG 0.657975 4_1:+82120685 None:intergenic
TTTCAATACAGACTGGAAGT+GGG 0.659284 4_1:-82122355 Msa0577820:intron
AAGGGTTACAATCCAAGTGG+AGG 0.659639 4_1:-82118914 Msa0577820:CDS
TGAGGAGATGGAGATTGTCG+AGG 0.660724 4_1:-82118798 Msa0577820:CDS
CCATCTTATAATAAAGACGA+TGG 0.663271 4_1:-82115444 Msa0577820:CDS
GCAGCGGCATATACCATACA+GGG 0.666202 4_1:-82119353 Msa0577820:CDS
AATTCATCAATTGATCAACA+AGG 0.669780 4_1:-82122287 Msa0577820:CDS
GGGAAGACCTACACTATGTG+GGG 0.672779 4_1:-82122335 Msa0577820:CDS
ACATATATACCTTTCCGCAG+GGG 0.675756 4_1:+82119258 None:intergenic
GCTTTGCGCTATTTCCCCTG+CGG 0.679797 4_1:-82119272 Msa0577820:CDS
TCGCCATCTTCATCAACATG+AGG 0.680114 4_1:+82118821 None:intergenic
GCCTACTGATTATGACACCA+AGG 0.680308 4_1:-82115493 Msa0577820:CDS
TTTCTCAGACAGGAAAGCAG+CGG 0.681765 4_1:-82119369 Msa0577820:CDS
TTATTGCAGGAGTCTCTGGG+TGG 0.696573 4_1:-82119313 Msa0577820:CDS
GCTGCATCGAGTTAAAACAA+AGG 0.702684 4_1:-82118933 Msa0577820:CDS
TCATCAATTGATCAACAAGG+AGG 0.703598 4_1:-82122284 Msa0577820:CDS
TGCCGTAATAGGTCAGACAA+GGG 0.703757 4_1:-82117799 Msa0577820:CDS
TGTTGATGAAGATGGCGATG+AGG 0.706823 4_1:-82118816 Msa0577820:CDS
CAAAGCTATCAAGAACAAAG+CGG 0.712191 4_1:-82119113 Msa0577820:CDS
GGAAAGAAGTGAATGGACTG+AGG 0.717967 4_1:-82117256 Msa0577820:CDS
CTACGTCGAGAATCTTACAG+AGG 0.721953 4_1:-82121806 Msa0577820:CDS
ATTGTTGGTGAAACACTGGG+AGG 0.805930 4_1:+82118611 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTATATATATTTTTT+AGG - chr4_1:82115669-82115688 Msa0577820:intron 0.0%
!!! TTTTATTTCATCAATCATAT+TGG - chr4_1:82117200-82117219 Msa0577820:CDS 15.0%
!! ATTCAGTTAAAAAATTGATT+TGG - chr4_1:82117422-82117441 Msa0577820:CDS 15.0%
!! ACAAAAATATATCAATTAAC+TGG + chr4_1:82117569-82117588 None:intergenic 15.0%
!!! GAAAATATTTTCTAAAAAAC+TGG + chr4_1:82117640-82117659 None:intergenic 15.0%
!! ACAATAGTTAAATTGTATTA+TGG - chr4_1:82117868-82117887 Msa0577820:intron 15.0%
!! CAATAGTTAAATTGTATTAT+GGG - chr4_1:82117869-82117888 Msa0577820:intron 15.0%
!! AAGGATAAAGTAATAAATAA+AGG - chr4_1:82118087-82118106 Msa0577820:intron 15.0%
!! AGGATAAAGTAATAAATAAA+GGG - chr4_1:82118088-82118107 Msa0577820:intron 15.0%
!! TTTATTAGTTGAAATTTAAG+TGG - chr4_1:82122320-82122339 Msa0577820:CDS 15.0%
!! TTATTAGTTGAAATTTAAGT+GGG - chr4_1:82122321-82122340 Msa0577820:CDS 15.0%
!! TAAAAATTAGCTATTAGAAT+AGG + chr4_1:82122708-82122727 None:intergenic 15.0%
!!! ATATTTTTTAGGTTATTGTG+AGG - chr4_1:82115680-82115699 Msa0577820:intron 20.0%
!! TAACAAAAACAAAATGATGA+AGG + chr4_1:82116024-82116043 None:intergenic 20.0%
!!! GTGATCTATATATAGTTTTT+AGG - chr4_1:82117160-82117179 Msa0577820:CDS 20.0%
!!! ATCTATATATAGTTTTTAGG+TGG - chr4_1:82117163-82117182 Msa0577820:CDS 20.0%
!! AAATGTTCCTAAAACTATAA+AGG + chr4_1:82117258-82117277 None:intergenic 20.0%
!!! TATAGTTTTAGGAACATTTA+AGG - chr4_1:82117259-82117278 Msa0577820:CDS 20.0%
!!! GAATTTGTCATCTTTAAAAT+TGG - chr4_1:82117293-82117312 Msa0577820:CDS 20.0%
!!! TTTCTAAAAAACTGGTTAAT+CGG + chr4_1:82117632-82117651 None:intergenic 20.0%
!! AATATCCTTCATTAATGATA+TGG - chr4_1:82118039-82118058 Msa0577820:intron 20.0%
!! TAGTGTATGAATATTTGAAA+TGG + chr4_1:82118577-82118596 None:intergenic 20.0%
!! AAGGTATATATGTAAAAAAC+TGG - chr4_1:82119187-82119206 Msa0577820:intron 20.0%
!! CACAATAGATGATTATAAAA+TGG + chr4_1:82120561-82120580 None:intergenic 20.0%
!!! GTAAAAGTAACTTCTTTTTA+AGG - chr4_1:82120757-82120776 Msa0577820:intron 20.0%
!! TATCAGAATTTCTATGAATT+TGG - chr4_1:82120922-82120941 Msa0577820:intron 20.0%
!! ATCAGAATTTCTATGAATTT+GGG - chr4_1:82120923-82120942 Msa0577820:intron 20.0%
!! TCTAAGTTCTGTTTATTATT+AGG + chr4_1:82121939-82121958 None:intergenic 20.0%
!! AATAATAAACAGAACTTAGA+TGG - chr4_1:82121939-82121958 Msa0577820:intron 20.0%
!! TCTAAGTTCTGTTTATTATT+AGG + chr4_1:82121939-82121958 None:intergenic 20.0%
!!! TTTTAGTTCAATTCCTTATT+TGG + chr4_1:82122374-82122393 None:intergenic 20.0%
!!! ACTAAAATAGTGTGTATTTT+AGG - chr4_1:82122387-82122406 Msa0577820:intron 20.0%
!! GGAAATAGAATAAACTTATT+AGG - chr4_1:82122588-82122607 Msa0577820:intron 20.0%
!! TACATATTACATATTGTAAG+AGG + chr4_1:82122685-82122704 None:intergenic 20.0%
!!! CAATTTATCAATTTGTTTGT+AGG + chr4_1:82122818-82122837 None:intergenic 20.0%
! GTTAAAAATTTCGGTAATTG+TGG + chr4_1:82115638-82115657 None:intergenic 25.0%
!!! CTTGATATTTTTGAGCTTAT+TGG - chr4_1:82115920-82115939 Msa0577820:intron 25.0%
!!! AATAGTTCTGTTTTTGCTTA+TGG - chr4_1:82115977-82115996 Msa0577820:intron 25.0%
!!! ATAGTTCTGTTTTTGCTTAT+GGG - chr4_1:82115978-82115997 Msa0577820:intron 25.0%
!!! TTTGTTTTTTCAATACAGAC+TGG - chr4_1:82116073-82116092 Msa0577820:intron 25.0%
! AATTCATCAATTGATCAACA+AGG - chr4_1:82116148-82116167 Msa0577820:intron 25.0%
! GATTAATTGATATAACAGCA+AGG + chr4_1:82116278-82116297 None:intergenic 25.0%
! TATTCTACTTGTGTTTATAC+TGG - chr4_1:82116554-82116573 Msa0577820:intron 25.0%
! ATTAGAGAAGATGTTAAATC+TGG - chr4_1:82116603-82116622 Msa0577820:intron 25.0%
! CTCTTCAAGAAATTTAACAA+GGG + chr4_1:82116894-82116913 None:intergenic 25.0%
! ACTCTTCAAGAAATTTAACA+AGG + chr4_1:82116895-82116914 None:intergenic 25.0%
!! TTAGCGTTGTTTCAATAATA+AGG - chr4_1:82116949-82116968 Msa0577820:CDS 25.0%
! TAGATAATTGTATACGCATA+AGG - chr4_1:82117027-82117046 Msa0577820:CDS 25.0%
!!! TTTTAACTGAATCTGCTTAA+TGG + chr4_1:82117414-82117433 None:intergenic 25.0%
!! TTCTAAAAAACTGGTTAATC+GGG + chr4_1:82117631-82117650 None:intergenic 25.0%
! ATAAATATTTGACAATCTCC+AGG + chr4_1:82117843-82117862 None:intergenic 25.0%
! AGTTAAATTGTATTATGGGT+CGG - chr4_1:82117873-82117892 Msa0577820:intron 25.0%
! TAGAATGACATAATTTGGAA+GGG + chr4_1:82117948-82117967 None:intergenic 25.0%
! ATTGCTAGAATGACATAATT+TGG + chr4_1:82117953-82117972 None:intergenic 25.0%
! ATATGGAGAACAGAAATTAA+AGG - chr4_1:82118056-82118075 Msa0577820:intron 25.0%
! AGAACAGAAATTAAAGGAAT+TGG - chr4_1:82118062-82118081 Msa0577820:intron 25.0%
! GAAATTAAAGGAATTGGAAA+AGG - chr4_1:82118068-82118087 Msa0577820:intron 25.0%
!! TAATAAATAAAGGGCATAGT+AGG - chr4_1:82118097-82118116 Msa0577820:intron 25.0%
! TGTTAGAATGACACATAATT+TGG - chr4_1:82118182-82118201 Msa0577820:CDS 25.0%
! TATTCCATCGTTATTGTTAT+AGG - chr4_1:82118537-82118556 Msa0577820:CDS 25.0%
!! TTTTCCTATAACAATAACGA+TGG + chr4_1:82118544-82118563 None:intergenic 25.0%
!! AATATTTGAAATGGCAACAA+AGG + chr4_1:82118568-82118587 None:intergenic 25.0%
! TATACCAATACTTCAATAGA+GGG + chr4_1:82118769-82118788 None:intergenic 25.0%
! TTTCAGCTACATATTTATTG+AGG + chr4_1:82118793-82118812 None:intergenic 25.0%
! GAACAAGTTACAAAACAAAA+AGG + chr4_1:82118936-82118955 None:intergenic 25.0%
! GTTCATCATATTTATACCTT+TGG - chr4_1:82118952-82118971 Msa0577820:intron 25.0%
! TTAGATCTGTAAAATCAAAC+AGG - chr4_1:82119475-82119494 Msa0577820:intron 25.0%
!!! TTAAGTTCTCAGTTTTAGTA+AGG + chr4_1:82120006-82120025 None:intergenic 25.0%
! TCAGAATTTCTATGAATTTG+GGG - chr4_1:82120924-82120943 Msa0577820:intron 25.0%
!! TTTTTATATAGACCATTCAC+CGG - chr4_1:82120996-82121015 Msa0577820:intron 25.0%
! TTATATCATCAATTCCATCA+TGG + chr4_1:82121428-82121447 None:intergenic 25.0%
!!! AGAATATTGATGATGATGAA+TGG + chr4_1:82121777-82121796 None:intergenic 25.0%
! TGACACTTAAATATTATCAG+TGG - chr4_1:82122183-82122202 Msa0577820:intron 25.0%
! ATATTGACAACAAAAACTGA+AGG - chr4_1:82122490-82122509 Msa0577820:CDS 25.0%
AGAGAAAGTAGAGTTTGAAA+TGG + chr4_1:82115355-82115374 None:intergenic 30.0%
TTTGAATTTCTTGGTACAGT+CGG + chr4_1:82115453-82115472 None:intergenic 30.0%
! GATTTAGGGTTTGAATTTCT+TGG + chr4_1:82115462-82115481 None:intergenic 30.0%
! GCTGGAAATTTTCTTAACAA+TGG + chr4_1:82115743-82115762 None:intergenic 30.0%
AGCAATTCTTTGTCAATCAA+CGG - chr4_1:82115760-82115779 Msa0577820:intron 30.0%
AATTGATACCCACTTCATTT+AGG + chr4_1:82116213-82116232 None:intergenic 30.0%
ATTCCTTGTTGAATCATTTG+AGG - chr4_1:82116242-82116261 Msa0577820:intron 30.0%
TTTATTCGGATCTAACAGAT+CGG + chr4_1:82116488-82116507 None:intergenic 30.0%
! ACCTGTAGGTTTCTTTTATT+CGG + chr4_1:82116502-82116521 None:intergenic 30.0%
! TGTAAATCAGCTTTTGATGA+AGG - chr4_1:82116674-82116693 Msa0577820:intron 30.0%
CTGAATATTTATCTGGTGTA+TGG - chr4_1:82116797-82116816 Msa0577820:CDS 30.0%
ATATTTATCTGGTGTATGGT+TGG - chr4_1:82116801-82116820 Msa0577820:CDS 30.0%
AGCAACATGCTTTCATTATT+TGG + chr4_1:82117058-82117077 None:intergenic 30.0%
GATAGATGTGTAAACACATA+AGG - chr4_1:82117090-82117109 Msa0577820:CDS 30.0%
! CGACAAACCTTTATAGTTTT+AGG - chr4_1:82117248-82117267 Msa0577820:CDS 30.0%
TGAAATGCTCAATTGCTTAA+AGG - chr4_1:82117458-82117477 Msa0577820:CDS 30.0%
GGATTGTTAAACAGAACAAT+AGG - chr4_1:82117722-82117741 Msa0577820:CDS 30.0%
AAGTAAAAACAGTGTGTGAA+CGG + chr4_1:82117775-82117794 None:intergenic 30.0%
GTTAAATTGTATTATGGGTC+GGG - chr4_1:82117874-82117893 Msa0577820:intron 30.0%
CTAGAATGACATAATTTGGA+AGG + chr4_1:82117949-82117968 None:intergenic 30.0%
GTTCTCCATATCATTAATGA+AGG + chr4_1:82118047-82118066 None:intergenic 30.0%
GAATGACACATAATTTGGAA+CGG - chr4_1:82118187-82118206 Msa0577820:CDS 30.0%
TCAGAACGACAAAAATTAAC+AGG - chr4_1:82118433-82118452 Msa0577820:CDS 30.0%
AATAGATCACTTTCACAACT+TGG - chr4_1:82118493-82118512 Msa0577820:CDS 30.0%
ATAGATCACTTTCACAACTT+GGG - chr4_1:82118494-82118513 Msa0577820:CDS 30.0%
TGCAAATGTTCAAGCTATAA+TGG + chr4_1:82118622-82118641 None:intergenic 30.0%
GTTTGATAGAAAGATACAGA+GGG + chr4_1:82118746-82118765 None:intergenic 30.0%
ATACCAATACTTCAATAGAG+GGG + chr4_1:82118768-82118787 None:intergenic 30.0%
CTATACCAATACTTCAATAG+AGG + chr4_1:82118770-82118789 None:intergenic 30.0%
ACTATGCTCAAACAATTACT+TGG - chr4_1:82118882-82118901 Msa0577820:CDS 30.0%
ATTTAATCTCAGTAAGCACT+TGG + chr4_1:82119010-82119029 None:intergenic 30.0%
CTGCAATAAAAATGTCAACT+TGG + chr4_1:82119111-82119130 None:intergenic 30.0%
!! CAAGTTGACATTTTTATTGC+AGG - chr4_1:82119109-82119128 Msa0577820:CDS 30.0%
! TCTTTTCTCTCTATGTATTG+TGG - chr4_1:82119221-82119240 Msa0577820:intron 30.0%
TCAAAACAAATTTCATGCAC+TGG + chr4_1:82119450-82119469 None:intergenic 30.0%
GCAATAAACACAAACTTCTT+CGG + chr4_1:82119565-82119584 None:intergenic 30.0%
!! AATGAAGGTTATTCTGAGAT+GGG + chr4_1:82119892-82119911 None:intergenic 30.0%
! TAAGGAAATTTGAAGCTTTC+AGG + chr4_1:82119988-82120007 None:intergenic 30.0%
GTTTCTTTCTCGTATGATAT+AGG - chr4_1:82120401-82120420 Msa0577820:intron 30.0%
TGTTTCATAACAATAATCCG+TGG - chr4_1:82120535-82120554 Msa0577820:intron 30.0%
AGATGATTATAAAATGGCCA+CGG + chr4_1:82120555-82120574 None:intergenic 30.0%
CTCGTACAGTAATCATAAAA+GGG + chr4_1:82120786-82120805 None:intergenic 30.0%
TCTCGTACAGTAATCATAAA+AGG + chr4_1:82120787-82120806 None:intergenic 30.0%
! AAACATTCAACAGCTTTTGA+AGG - chr4_1:82120825-82120844 Msa0577820:intron 30.0%
AATCTAGGTTCAGATGAATT+AGG + chr4_1:82121057-82121076 None:intergenic 30.0%
TAATTCATCTGAACCTAGAT+TGG - chr4_1:82121056-82121075 Msa0577820:intron 30.0%
!! TTCCTGTTCAAGTTTTACTT+TGG + chr4_1:82121163-82121182 None:intergenic 30.0%
! TTTAGAACAGTATGCAGATT+TGG - chr4_1:82121362-82121381 Msa0577820:intron 30.0%
ATCCTAGTAGATGAAAATAG+AGG - chr4_1:82121555-82121574 Msa0577820:intron 30.0%
TCCTAGTAGATGAAAATAGA+GGG - chr4_1:82121556-82121575 Msa0577820:intron 30.0%
TGTGTTTCTTAGTCAATTTG+AGG - chr4_1:82121980-82121999 Msa0577820:intron 30.0%
TGTGTTTCTTAGTCAATTTG+AGG - chr4_1:82121980-82121999 Msa0577820:intron 30.0%
! AGTTCAATTCCTTATTTGGT+GGG + chr4_1:82122370-82122389 None:intergenic 30.0%
! TAGTTCAATTCCTTATTTGG+TGG + chr4_1:82122371-82122390 None:intergenic 30.0%
! GATTTGATAACAAGAACAGA+AGG - chr4_1:82122461-82122480 Msa0577820:CDS 30.0%
ACAACAAAAACTGAAGGAAT+GGG - chr4_1:82122496-82122515 Msa0577820:CDS 30.0%
GAAACTCATTCAAAGCAAAT+AGG - chr4_1:82122567-82122586 Msa0577820:intron 30.0%
ATGACAAGATCATTACAAGT+AGG + chr4_1:82122922-82122941 None:intergenic 30.0%
CCATCGTCTTTATTATAAGA+TGG + chr4_1:82122994-82123013 None:intergenic 30.0%
CCATCTTATAATAAAGACGA+TGG - chr4_1:82122991-82123010 Msa0577820:CDS 30.0%
TTGCTAAATTAGAACAGTCA+TGG - chr4_1:82123019-82123038 Msa0577820:exon 30.0%
! AACAGTAATCTTCTAGTTGA+TGG - chr4_1:82123092-82123111 Msa0577820:five_prime_UTR 30.0%
!! TGTGCTTATGCGTTGATTTA+GGG + chr4_1:82115476-82115495 None:intergenic 35.0%
!! TTGTGCTTATGCGTTGATTT+AGG + chr4_1:82115477-82115496 None:intergenic 35.0%
AATTTCGGTAATTGTGGATG+AGG + chr4_1:82115632-82115651 None:intergenic 35.0%
GTTGATTGACAAAGAATTGC+TGG + chr4_1:82115761-82115780 None:intergenic 35.0%
TAGTAGAGAATTGTTTGGCT+GGG - chr4_1:82115951-82115970 Msa0577820:intron 35.0%
! TTTTCAATACAGACTGGAAG+TGG - chr4_1:82116079-82116098 Msa0577820:intron 35.0%
TTTCAATACAGACTGGAAGT+GGG - chr4_1:82116080-82116099 Msa0577820:intron 35.0%
TCATCAATTGATCAACAAGG+AGG - chr4_1:82116151-82116170 Msa0577820:intron 35.0%
AGACCTCAAATGATTCAACA+AGG + chr4_1:82116248-82116267 None:intergenic 35.0%
! TTGATACTTGAGTTGCTTGT+CGG + chr4_1:82116335-82116354 None:intergenic 35.0%
ATGTCACTGTTCATTTCTTG+AGG - chr4_1:82116354-82116373 Msa0577820:intron 35.0%
TCCGAATAAAAGAAACCTAC+AGG - chr4_1:82116498-82116517 Msa0577820:intron 35.0%
! AATGGTTTGGATTAACCTGT+AGG + chr4_1:82116516-82116535 None:intergenic 35.0%
CACAAGTAGAATATGCACAA+GGG + chr4_1:82116547-82116566 None:intergenic 35.0%
ACACAAGTAGAATATGCACA+AGG + chr4_1:82116548-82116567 None:intergenic 35.0%
ACTTGTGTTTATACTGGAAC+TGG - chr4_1:82116560-82116579 Msa0577820:intron 35.0%
CTCAACGCTGAATATTTATC+TGG - chr4_1:82116790-82116809 Msa0577820:CDS 35.0%
CTTGAAGAGTAATTATCCCT+AGG - chr4_1:82116905-82116924 Msa0577820:CDS 35.0%
GCATTTCATACGAATTCCTA+GGG + chr4_1:82116924-82116943 None:intergenic 35.0%
AGCATTTCATACGAATTCCT+AGG + chr4_1:82116925-82116944 None:intergenic 35.0%
! ATAATGAAAGCATGTTGCTG+TGG - chr4_1:82117059-82117078 Msa0577820:CDS 35.0%
ATAATGAATGCACATCACTG+TGG - chr4_1:82117122-82117141 Msa0577820:CDS 35.0%
TAATGAATGCACATCACTGT+GGG - chr4_1:82117123-82117142 Msa0577820:CDS 35.0%
!! TTTTAGGTGGTGCTTCTATT+AGG - chr4_1:82117176-82117195 Msa0577820:CDS 35.0%
ACTATAAAGGTTTGTCGCAA+TGG + chr4_1:82117245-82117264 None:intergenic 35.0%
! ATTTTGCGTGAAATGCTTGT+TGG - chr4_1:82117353-82117372 Msa0577820:CDS 35.0%
TAGTTACTAGCATGAAAGCA+AGG + chr4_1:82117524-82117543 None:intergenic 35.0%
TCGGGATTTAGAAGAGAAAT+GGG + chr4_1:82117613-82117632 None:intergenic 35.0%
ATCGGGATTTAGAAGAGAAA+TGG + chr4_1:82117614-82117633 None:intergenic 35.0%
TTATTTACCTTTCACTGTGC+AGG - chr4_1:82117700-82117719 Msa0577820:intron 35.0%
TATTTACCTTTCACTGTGCA+GGG - chr4_1:82117701-82117720 Msa0577820:CDS 35.0%
AGTAAAAACAGTGTGTGAAC+GGG + chr4_1:82117774-82117793 None:intergenic 35.0%
CATGAGAAAAGCAAATGTTG+AGG + chr4_1:82118249-82118268 None:intergenic 35.0%
!! ATCAATCTCGTTGATTTAGC+TGG - chr4_1:82118409-82118428 Msa0577820:CDS 35.0%
!! TCAATCTCGTTGATTTAGCT+GGG - chr4_1:82118410-82118429 Msa0577820:CDS 35.0%
!! GCTATAATGGATATCAACAC+TGG + chr4_1:82118609-82118628 None:intergenic 35.0%
TGTACAACAAAGAAGTCGTA+TGG + chr4_1:82118670-82118689 None:intergenic 35.0%
GAAATAAATAGACCTGCACA+TGG + chr4_1:82118724-82118743 None:intergenic 35.0%
GGTTTGATAGAAAGATACAG+AGG + chr4_1:82118747-82118766 None:intergenic 35.0%
AAACCCCTCTATTGAAGTAT+TGG - chr4_1:82118762-82118781 Msa0577820:CDS 35.0%
! AAATCAGCAGGCAAACATTT+TGG + chr4_1:82118843-82118862 None:intergenic 35.0%
TTGTAGAATTCAGTAGCCAA+AGG + chr4_1:82118971-82118990 None:intergenic 35.0%
! ATTTTTATTGCAGGAGTCTC+TGG - chr4_1:82119118-82119137 Msa0577820:CDS 35.0%
! TTTTTATTGCAGGAGTCTCT+GGG - chr4_1:82119119-82119138 Msa0577820:CDS 35.0%
TACATATATACCTTTCCGCA+GGG + chr4_1:82119181-82119200 None:intergenic 35.0%
TTACATATATACCTTTCCGC+AGG + chr4_1:82119182-82119201 None:intergenic 35.0%
CAAAGCTATCAAGAACAAAG+CGG - chr4_1:82119322-82119341 Msa0577820:CDS 35.0%
! AAAAGAGAAGGTTGATCATG+GGG + chr4_1:82119422-82119441 None:intergenic 35.0%
! GAAAAGAGAAGGTTGATCAT+GGG + chr4_1:82119423-82119442 None:intergenic 35.0%
CTGCATCGAGTTAAAACAAA+GGG - chr4_1:82119503-82119522 Msa0577820:intron 35.0%
CAACATGAGGTAGTGATAAT+GGG + chr4_1:82119604-82119623 None:intergenic 35.0%
TCAACATGAGGTAGTGATAA+TGG + chr4_1:82119605-82119624 None:intergenic 35.0%
TCACAGTTCATTGTAGCATT+AGG + chr4_1:82119749-82119768 None:intergenic 35.0%
!! ATGAAGGTTATTCTGAGATG+GGG + chr4_1:82119891-82119910 None:intergenic 35.0%
! CAATGAAGGTTATTCTGAGA+TGG + chr4_1:82119893-82119912 None:intergenic 35.0%
! CTAAGTCACTTTCACAATGA+AGG + chr4_1:82119907-82119926 None:intergenic 35.0%
CTTCATTGTGAAAGTGACTT+AGG - chr4_1:82119905-82119924 Msa0577820:intron 35.0%
! ACTTTGAGAACTTGCTTCTT+TGG + chr4_1:82120322-82120341 None:intergenic 35.0%
TTGTCAATCACGTTTGTAGT+TGG - chr4_1:82120585-82120604 Msa0577820:intron 35.0%
ATCTTCATCTTCAGAACTTC+TGG + chr4_1:82120868-82120887 None:intergenic 35.0%
ATTTCTATGAATTTGGGGAG+AGG - chr4_1:82120929-82120948 Msa0577820:intron 35.0%
TTTCTATGAATTTGGGGAGA+GGG - chr4_1:82120930-82120949 Msa0577820:intron 35.0%
TGCCAAAGTAAAACTTGAAC+AGG - chr4_1:82121158-82121177 Msa0577820:intron 35.0%
TTGAACAGGAAAGAAGTGAA+TGG - chr4_1:82121172-82121191 Msa0577820:intron 35.0%
TTCCTTGGAAAACTTCTTCT+CGG + chr4_1:82121298-82121317 None:intergenic 35.0%
GCAATGCAAATAGCTATAGA+AGG - chr4_1:82121327-82121346 Msa0577820:intron 35.0%
AACATGTTCAGTTGCTTGAA+AGG - chr4_1:82121391-82121410 Msa0577820:intron 35.0%
AAGCAGAAAAAGAAGCAGAA+AGG - chr4_1:82121529-82121548 Msa0577820:intron 35.0%
GATGAATGGTGTAGTTAAGT+TGG + chr4_1:82121763-82121782 None:intergenic 35.0%
ATGAGACTAGAAGAAACAGA+TGG + chr4_1:82121845-82121864 None:intergenic 35.0%
AGTGAGAAAATGATAGTAGC+TGG - chr4_1:82121874-82121893 Msa0577820:intron 35.0%
CTTAGTCAATTTGAGGACAA+AGG - chr4_1:82121987-82122006 Msa0577820:intron 35.0%
GATAGTAGCTGTCATTCATA+AGG - chr4_1:82122045-82122064 Msa0577820:intron 35.0%
CTTAGTCAATTTGAGGACAA+AGG - chr4_1:82121987-82122006 Msa0577820:intron 35.0%
TCTTGGTATGTAAAGCTACT+TGG - chr4_1:82122230-82122249 Msa0577820:intron 35.0%
CTTGGTATGTAAAGCTACTT+GGG - chr4_1:82122231-82122250 Msa0577820:intron 35.0%
! TAAGTGGGTATTACCACTTT+TGG - chr4_1:82122336-82122355 Msa0577820:CDS 35.0%
!! AAGTGGGTATTACCACTTTT+GGG - chr4_1:82122337-82122356 Msa0577820:CDS 35.0%
GACAACAAAAACTGAAGGAA+TGG - chr4_1:82122495-82122514 Msa0577820:CDS 35.0%
GTTATTCAGAGCAACTTTCT+AGG - chr4_1:82122618-82122637 Msa0577820:intron 35.0%
AAATGAAGCACACAATGGAT+TGG + chr4_1:82122658-82122677 None:intergenic 35.0%
GAAACAAATGAAGCACACAA+TGG + chr4_1:82122663-82122682 None:intergenic 35.0%
ATTAACATTGTGTGCAACCT+TGG + chr4_1:82122962-82122981 None:intergenic 35.0%
ATTGTGGATGAGGAAAAGAG+TGG + chr4_1:82115622-82115641 None:intergenic 40.0%
TTCTTTGTCAATCAACGGTC+AGG - chr4_1:82115765-82115784 Msa0577820:intron 40.0%
AATGTGAGCGATGGAATCAA+AGG + chr4_1:82115797-82115816 None:intergenic 40.0%
GCCTCTAGTAGAGAATTGTT+TGG - chr4_1:82115946-82115965 Msa0577820:intron 40.0%
GCCAAACAATTCTCTACTAG+AGG + chr4_1:82115950-82115969 None:intergenic 40.0%
CTAGTAGAGAATTGTTTGGC+TGG - chr4_1:82115950-82115969 Msa0577820:intron 40.0%
!!! TTCTGTTTTTGCTTATGGGC+AGG - chr4_1:82115982-82116001 Msa0577820:intron 40.0%
!! TTTTCGACCTCCAAAGCATT+GGG + chr4_1:82116130-82116149 None:intergenic 40.0%
! ATTTTCGACCTCCAAAGCAT+TGG + chr4_1:82116131-82116150 None:intergenic 40.0%
TTTGCACGCCTAAATGAAGT+GGG - chr4_1:82116202-82116221 Msa0577820:intron 40.0%
AAGGGAAGACTACAATGGTT+TGG + chr4_1:82116529-82116548 None:intergenic 40.0%
!! GGAGCATGTTTTTACTGTGA+AGG - chr4_1:82116650-82116669 Msa0577820:intron 40.0%
! GTCTAAGACTAGTTCGACAA+TGG + chr4_1:82116724-82116743 None:intergenic 40.0%
GTTTACACATCTATCCCACA+GGG + chr4_1:82117085-82117104 None:intergenic 40.0%
TGTTTACACATCTATCCCAC+AGG + chr4_1:82117086-82117105 None:intergenic 40.0%
CGGGATTTAGAAGAGAAATG+GGG + chr4_1:82117612-82117631 None:intergenic 40.0%
GGAGCTTTCAGAATTTACAC+TGG + chr4_1:82117753-82117772 None:intergenic 40.0%
TGTTGTTGAATCTCGATGCA+AGG - chr4_1:82117796-82117815 Msa0577820:CDS 40.0%
TATACTGTTATCTCGTGTCC+TGG - chr4_1:82117822-82117841 Msa0577820:CDS 40.0%
! GTTAAAGATCGCTGACTGTT+AGG + chr4_1:82117917-82117936 None:intergenic 40.0%
CTCTGCAAATTGAAGATACG+AGG + chr4_1:82118352-82118371 None:intergenic 40.0%
CAAAAATTAACAGGTGCAGC+AGG - chr4_1:82118442-82118461 Msa0577820:CDS 40.0%
!! TTGCCTGCTGATTTAGTTGT+TGG - chr4_1:82118849-82118868 Msa0577820:CDS 40.0%
ATGCCAACAACTAAATCAGC+AGG + chr4_1:82118855-82118874 None:intergenic 40.0%
!! TGCTGATTTAGTTGTTGGCA+TGG - chr4_1:82118854-82118873 Msa0577820:CDS 40.0%
ATCTCAGTAAGCACTTGGAA+TGG + chr4_1:82119005-82119024 None:intergenic 40.0%
CTGAGATTAAATCTGACTGC+AGG - chr4_1:82119018-82119037 Msa0577820:intron 40.0%
ACATATATACCTTTCCGCAG+GGG + chr4_1:82119180-82119199 None:intergenic 40.0%
TGAAGTAATACGCGAACTCA+AGG - chr4_1:82119385-82119404 Msa0577820:CDS 40.0%
! AAAGAGAAGGTTGATCATGG+GGG + chr4_1:82119421-82119440 None:intergenic 40.0%
! GGAAAAGAGAAGGTTGATCA+TGG + chr4_1:82119424-82119443 None:intergenic 40.0%
! TGATCAACCTTCTCTTTTCC+TGG - chr4_1:82119424-82119443 Msa0577820:intron 40.0%
GCTGCATCGAGTTAAAACAA+AGG - chr4_1:82119502-82119521 Msa0577820:intron 40.0%
ACAAAGGGTTACAATCCAAG+TGG - chr4_1:82119518-82119537 Msa0577820:intron 40.0%
! CTACCTCATGTTGATGAAGA+TGG - chr4_1:82119611-82119630 Msa0577820:intron 40.0%
GAAGATCATGCCAGAATTCT+CGG - chr4_1:82119668-82119687 Msa0577820:intron 40.0%
! CTGATTGTTGGTGAAACACT+GGG + chr4_1:82119830-82119849 None:intergenic 40.0%
TGATCAACAGTCTTTGTGAC+CGG + chr4_1:82119938-82119957 None:intergenic 40.0%
AGAACTTAACAGCTAGCATC+CGG - chr4_1:82120017-82120036 Msa0577820:intron 40.0%
CAATAGTTTCAAGACCATGC+CGG + chr4_1:82120039-82120058 None:intergenic 40.0%
!! AAAGTTGGCTTGGAATCTTC+AGG + chr4_1:82120118-82120137 None:intergenic 40.0%
ACTTTGTCCACTGGAAAAGT+TGG + chr4_1:82120133-82120152 None:intergenic 40.0%
TCCAGTGGACAAAGTTAATG+TGG - chr4_1:82120138-82120157 Msa0577820:intron 40.0%
CCAGTGGACAAAGTTAATGT+GGG - chr4_1:82120139-82120158 Msa0577820:intron 40.0%
! ACTTTCGTCGATGATAATGC+TGG - chr4_1:82120169-82120188 Msa0577820:intron 40.0%
! AGCATCTCAGATGCATTTTC+CGG - chr4_1:82120349-82120368 Msa0577820:intron 40.0%
AGATCGAAATTCAGCTATGC+CGG + chr4_1:82120371-82120390 None:intergenic 40.0%
! ATAGGCTGCAGAGAAAGTTT+TGG - chr4_1:82120419-82120438 Msa0577820:intron 40.0%
!! AAGTTTTGGCAGGATCCATA+AGG - chr4_1:82120433-82120452 Msa0577820:intron 40.0%
AGGATCCATAAGGAGAGAAA+TGG - chr4_1:82120443-82120462 Msa0577820:intron 40.0%
TGGAACAATACAAGCATGAG+AGG - chr4_1:82120605-82120624 Msa0577820:intron 40.0%
GGAACAATACAAGCATGAGA+GGG - chr4_1:82120606-82120625 Msa0577820:intron 40.0%
TTCCCTTGTCTGACCTATTA+CGG + chr4_1:82120641-82120660 None:intergenic 40.0%
TGGGTAAAACACCATCCATA+AGG + chr4_1:82120687-82120706 None:intergenic 40.0%
TCGCTCATGAATTTCTCAGT+GGG + chr4_1:82120706-82120725 None:intergenic 40.0%
TTCGCTCATGAATTTCTCAG+TGG + chr4_1:82120707-82120726 None:intergenic 40.0%
TACCTCATGTTCATGAGCAA+GGG + chr4_1:82120740-82120759 None:intergenic 40.0%
TTACCTCATGTTCATGAGCA+AGG + chr4_1:82120741-82120760 None:intergenic 40.0%
TATTCCTTTCTTGCAGATGC+CGG + chr4_1:82121018-82121037 None:intergenic 40.0%
GAATTAGGCAACTGCAACAA+TGG + chr4_1:82121042-82121061 None:intergenic 40.0%
!! GTTAGGTTTGCTACCAATCT+AGG + chr4_1:82121072-82121091 None:intergenic 40.0%
! TTGAATTGGGATTGGCAGTT+AGG + chr4_1:82121089-82121108 None:intergenic 40.0%
!! AACTTCAGCTCTGAGTTCTT+CGG + chr4_1:82121229-82121248 None:intergenic 40.0%
ACAAGTCGTTAGCTGAAAAG+AGG - chr4_1:82121256-82121275 Msa0577820:intron 40.0%
! GAAGTTTTCCAAGGAACTGA+AGG - chr4_1:82121302-82121321 Msa0577820:intron 40.0%
!! ACTGTTCTAAAATCCGTGCA+TGG + chr4_1:82121353-82121372 None:intergenic 40.0%
AGAACAGTATGCAGATTTGG+AGG - chr4_1:82121365-82121384 Msa0577820:intron 40.0%
AGGCATAGAAAGATCCATGA+TGG - chr4_1:82121411-82121430 Msa0577820:intron 40.0%
TGCTGAAATTTCTGCTGCAA+GGG + chr4_1:82121505-82121524 None:intergenic 40.0%
ATGCTGAAATTTCTGCTGCA+AGG + chr4_1:82121506-82121525 None:intergenic 40.0%
! GCCCTCTATTTTCATCTACT+AGG + chr4_1:82121560-82121579 None:intergenic 40.0%
AGATGAAAATAGAGGGCTTC+AGG - chr4_1:82121563-82121582 Msa0577820:intron 40.0%
CGTCTTAAAGAAGCAGAAGA+AGG - chr4_1:82121639-82121658 Msa0577820:intron 40.0%
! TAAGTTGGACGAAAAGAGAG+AGG + chr4_1:82121748-82121767 None:intergenic 40.0%
TATGACAGTGTCAATGGAAC+AGG + chr4_1:82121805-82121824 None:intergenic 40.0%
CGAACATATGACAGTGTCAA+TGG + chr4_1:82121811-82121830 None:intergenic 40.0%
GATAGTAGCTGGCATTCATA+AGG - chr4_1:82121885-82121904 Msa0577820:intron 40.0%
GTTGGCCATCAGTATGAATT+TGG - chr4_1:82121907-82121926 Msa0577820:intron 40.0%
GTCCTCCAAATTCATACTGA+TGG + chr4_1:82121915-82121934 None:intergenic 40.0%
GTAGCTGTCATTCATAAGGT+TGG - chr4_1:82122049-82122068 Msa0577820:intron 40.0%
GTTGGCCATCAGTATGAATT+TGG - chr4_1:82121907-82121926 Msa0577820:intron 40.0%
GTCCTCCAAATTCATACTGA+TGG + chr4_1:82121915-82121934 None:intergenic 40.0%
TACTTGGGCCATATGTTGAA+TGG - chr4_1:82122246-82122265 Msa0577820:CDS 40.0%
ACTTGGGCCATATGTTGAAT+GGG - chr4_1:82122247-82122266 Msa0577820:CDS 40.0%
AAAAACTGAAGGAATGGGAG+TGG - chr4_1:82122501-82122520 Msa0577820:CDS 40.0%
CAGCCTTAAAAGAGTGAACT+GGG + chr4_1:82122737-82122756 None:intergenic 40.0%
TCAGCCTTAAAAGAGTGAAC+TGG + chr4_1:82122738-82122757 None:intergenic 40.0%
TTTGATGTGATCTGCAGAAG+CGG - chr4_1:82122761-82122780 Msa0577820:intron 40.0%
TTCCATAGGCAAACGTGATT+TGG + chr4_1:82122887-82122906 None:intergenic 40.0%
GGTTGTATTGCTTCTTCCAT+AGG + chr4_1:82122901-82122920 None:intergenic 40.0%
!! ACCTTGGTGTCATAATCAGT+AGG + chr4_1:82122946-82122965 None:intergenic 40.0%
TTAGAACAGTCATGGTTCTC+TGG - chr4_1:82123027-82123046 Msa0577820:five_prime_UTR 40.0%
AGAGAGAGAGAGAGAGAGAA+CGG + chr4_1:82115327-82115346 None:intergenic 45.0%
! TTTTGCGACGGGAATCTGAA+CGG + chr4_1:82115401-82115420 None:intergenic 45.0%
! TCGTTGCAAGCTTTTTGCGA+CGG + chr4_1:82115413-82115432 None:intergenic 45.0%
TTGAGAGGGTTATGGTGAGA+GGG + chr4_1:82115531-82115550 None:intergenic 45.0%
TTTGAGAGGGTTATGGTGAG+AGG + chr4_1:82115532-82115551 None:intergenic 45.0%
AAGAAAAACCACCTTGACGC+CGG + chr4_1:82115592-82115611 None:intergenic 45.0%
!! TCGTCTTTTTCACTGCTCAC+TGG + chr4_1:82115712-82115731 None:intergenic 45.0%
AGTAGCATCAATGTGAGCGA+TGG + chr4_1:82115806-82115825 None:intergenic 45.0%
TGGGAAGACCTACACTATGT+GGG - chr4_1:82116099-82116118 Msa0577820:intron 45.0%
AGAGTCGCTCAAAAACACGA+GGG + chr4_1:82116183-82116202 None:intergenic 45.0%
AAGAGTCGCTCAAAAACACG+AGG + chr4_1:82116184-82116203 None:intergenic 45.0%
CTTTGCACGCCTAAATGAAG+TGG - chr4_1:82116201-82116220 Msa0577820:intron 45.0%
AATCGTTGTGTCTCATGCGT+AGG - chr4_1:82116294-82116313 Msa0577820:intron 45.0%
TGCACAAGGGAAGACTACAA+TGG + chr4_1:82116534-82116553 None:intergenic 45.0%
CTACGTCGAGAATCTTACAG+AGG - chr4_1:82116629-82116648 Msa0577820:intron 45.0%
!! TTGTCGCAATGGTGATGGAA+AGG + chr4_1:82117234-82117253 None:intergenic 45.0%
AAGGTTTGTCGCAATGGTGA+TGG + chr4_1:82117239-82117258 None:intergenic 45.0%
AACAATCCCTGCACAGTGAA+AGG + chr4_1:82117710-82117729 None:intergenic 45.0%
CAGTAAGCACTTGGAATGGT+GGG + chr4_1:82119001-82119020 None:intergenic 45.0%
TCAGTAAGCACTTGGAATGG+TGG + chr4_1:82119002-82119021 None:intergenic 45.0%
CTTGCTGAAGTTTCTCAGAC+AGG - chr4_1:82119056-82119075 Msa0577820:CDS 45.0%
TTTCTCAGACAGGAAAGCAG+CGG - chr4_1:82119066-82119085 Msa0577820:CDS 45.0%
CGCGTATTACTTCACGCAAT+TGG + chr4_1:82119379-82119398 None:intergenic 45.0%
! ACAAATTTCATGCACTGGCC+AGG + chr4_1:82119445-82119464 None:intergenic 45.0%
AAGGGTTACAATCCAAGTGG+AGG - chr4_1:82119521-82119540 Msa0577820:intron 45.0%
TTCGGATCAAAGCTGCTGAA+TGG + chr4_1:82119547-82119566 None:intergenic 45.0%
!! GATAATGGGTAGTGGAGTCT+AGG + chr4_1:82119590-82119609 None:intergenic 45.0%
!! GAGGTAGTGATAATGGGTAG+TGG + chr4_1:82119598-82119617 None:intergenic 45.0%
TCGCCATCTTCATCAACATG+AGG + chr4_1:82119617-82119636 None:intergenic 45.0%
! TGTTGATGAAGATGGCGATG+AGG - chr4_1:82119619-82119638 Msa0577820:intron 45.0%
AATTCGAGCAGAGATTGTGC+TGG - chr4_1:82119692-82119711 Msa0577820:intron 45.0%
! ATTGTTGGTGAAACACTGGG+AGG + chr4_1:82119827-82119846 None:intergenic 45.0%
! GCTGATTGTTGGTGAAACAC+TGG + chr4_1:82119831-82119850 None:intergenic 45.0%
! TTTCTGCTGCTGCTGATTGT+TGG + chr4_1:82119842-82119861 None:intergenic 45.0%
! AGATGGGGACAGCTTTGATA+AGG + chr4_1:82119876-82119895 None:intergenic 45.0%
AAGTGACTTAGGCATGATGC+CGG - chr4_1:82119916-82119935 Msa0577820:intron 45.0%
! TTCCAAGCCAACTTTTCCAG+TGG - chr4_1:82120123-82120142 Msa0577820:intron 45.0%
CCCACATTAACTTTGTCCAC+TGG + chr4_1:82120142-82120161 None:intergenic 45.0%
CAGAGCCATTTCTCTCCTTA+TGG + chr4_1:82120451-82120470 None:intergenic 45.0%
CATAAGGAGAGAAATGGCTC+TGG - chr4_1:82120449-82120468 Msa0577820:intron 45.0%
AGGGAATGCAATGCCGTAAT+AGG - chr4_1:82120625-82120644 Msa0577820:intron 45.0%
ATGCCGTAATAGGTCAGACA+AGG - chr4_1:82120635-82120654 Msa0577820:intron 45.0%
TGCCGTAATAGGTCAGACAA+GGG - chr4_1:82120636-82120655 Msa0577820:intron 45.0%
GTAATAGGTCAGACAAGGGA+AGG - chr4_1:82120640-82120659 Msa0577820:CDS 45.0%
AGCTTCGGTTGAATTGGGAT+TGG + chr4_1:82121097-82121116 None:intergenic 45.0%
! ATTTGCTTCAGCGCTAGCTT+CGG + chr4_1:82121112-82121131 None:intergenic 45.0%
! GCACTGTCTTCAGTTGATTC+TGG + chr4_1:82121141-82121160 None:intergenic 45.0%
!! GGAAAGAAGTGAATGGACTG+AGG - chr4_1:82121179-82121198 Msa0577820:intron 45.0%
!! AGCTCTGAGTTCTTCGGAAA+GGG + chr4_1:82121223-82121242 None:intergenic 45.0%
! TGCCGAGAAGAAGTTTTCCA+AGG - chr4_1:82121293-82121312 Msa0577820:intron 45.0%
CATTGCATCCTTCAGTTCCT+TGG + chr4_1:82121313-82121332 None:intergenic 45.0%
TAGCTATAGAAGGCCATGCA+CGG - chr4_1:82121337-82121356 Msa0577820:intron 45.0%
TGCACTTCTTACTGCTGTTC+TGG + chr4_1:82121463-82121482 None:intergenic 45.0%
GTAGCTGGCATTCATAAGGT+TGG - chr4_1:82121889-82121908 Msa0577820:intron 45.0%
GGCCATCAGTATGAATTTGG+AGG - chr4_1:82121910-82121929 Msa0577820:intron 45.0%
GGCCATCAGTATGAATTTGG+AGG - chr4_1:82121910-82121929 Msa0577820:intron 45.0%
! TGGTGATGTAGTTTGTGCCA+GGG - chr4_1:82122203-82122222 Msa0577820:intron 45.0%
TTACATACCAAGATGCTCCC+TGG + chr4_1:82122223-82122242 None:intergenic 45.0%
TTCCCAGCCCATTCAACATA+TGG + chr4_1:82122257-82122276 None:intergenic 45.0%
AACGTGAGAAAGTGAGTTGC+TGG + chr4_1:82122285-82122304 None:intergenic 45.0%
GGAGTAGATCCCACCAAATA+AGG - chr4_1:82122358-82122377 Msa0577820:intron 45.0%
! CAGCCCAGTTCACTCTTTTA+AGG - chr4_1:82122731-82122750 Msa0577820:CDS 45.0%
TTGATGTGATCTGCAGAAGC+GGG - chr4_1:82122762-82122781 Msa0577820:intron 45.0%
! TAGGCAAACGTGATTTGGCA+AGG + chr4_1:82122882-82122901 None:intergenic 45.0%
TGCCAAATCACGTTTGCCTA+TGG - chr4_1:82122882-82122901 Msa0577820:CDS 45.0%
! GCCTACTGATTATGACACCA+AGG - chr4_1:82122942-82122961 Msa0577820:CDS 45.0%
!! TAAAAATTAGTTAAAAATTT+CGG + chr4_1:82115647-82115666 None:intergenic 5.0%
!!! TTGTTTATTTTAATAATTTT+TGG - chr4_1:82117585-82117604 Msa0577820:CDS 5.0%
GGGAATCTGAACGGAAATGG+TGG + chr4_1:82115392-82115411 None:intergenic 50.0%
GACGGGAATCTGAACGGAAA+TGG + chr4_1:82115395-82115414 None:intergenic 50.0%
! CGTTGCAAGCTTTTTGCGAC+GGG + chr4_1:82115412-82115431 None:intergenic 50.0%
TATGGTGAGAGGGAGGCTTA+GGG + chr4_1:82115521-82115540 None:intergenic 50.0%
TTATGGTGAGAGGGAGGCTT+AGG + chr4_1:82115522-82115541 None:intergenic 50.0%
GCTTGCGTTTGAGAGGGTTA+TGG + chr4_1:82115539-82115558 None:intergenic 50.0%
CATCGAGCTTGCGTTTGAGA+GGG + chr4_1:82115545-82115564 None:intergenic 50.0%
TCATCGAGCTTGCGTTTGAG+AGG + chr4_1:82115546-82115565 None:intergenic 50.0%
CGCTCACATTGATGCTACTC+AGG - chr4_1:82115807-82115826 Msa0577820:intron 50.0%
GTGGGAAGACCTACACTATG+TGG - chr4_1:82116098-82116117 Msa0577820:intron 50.0%
GGGAAGACCTACACTATGTG+GGG - chr4_1:82116100-82116119 Msa0577820:intron 50.0%
GAGTCGCTCAAAAACACGAG+GGG + chr4_1:82116182-82116201 None:intergenic 50.0%
! TGCGTGAAATGCTTGTTGGC+AGG - chr4_1:82117357-82117376 Msa0577820:CDS 50.0%
TGTTGCCAGCTTCCTTCAGA+CGG + chr4_1:82118471-82118490 None:intergenic 50.0%
AGCAGCGGCATATACCATAC+AGG - chr4_1:82119081-82119100 Msa0577820:CDS 50.0%
GCAGCGGCATATACCATACA+GGG - chr4_1:82119082-82119101 Msa0577820:CDS 50.0%
GTCAACTTGGAGTCCCTGTA+TGG + chr4_1:82119098-82119117 None:intergenic 50.0%
TTATTGCAGGAGTCTCTGGG+TGG - chr4_1:82119122-82119141 Msa0577820:CDS 50.0%
CGACTCAGCATTGCAGTTGT+AGG - chr4_1:82119261-82119280 Msa0577820:intron 50.0%
TGAAGATGGCGATGAGGAGA+TGG - chr4_1:82119625-82119644 Msa0577820:intron 50.0%
TGAGGAGATGGAGATTGTCG+AGG - chr4_1:82119637-82119656 Msa0577820:intron 50.0%
GAGATGGAGATTGTCGAGGA+TGG - chr4_1:82119641-82119660 Msa0577820:intron 50.0%
GCTCGAATTGCCGAGAATTC+TGG + chr4_1:82119681-82119700 None:intergenic 50.0%
! TGTGATAACCCTGCTAGCCT+CGG - chr4_1:82119764-82119783 Msa0577820:intron 50.0%
! ATTTTACGCCGAGGCTAGCA+GGG + chr4_1:82119775-82119794 None:intergenic 50.0%
! CAGTAGCACATTTTACGCCG+AGG + chr4_1:82119784-82119803 None:intergenic 50.0%
TTGGTGAAACACTGGGAGGT+GGG + chr4_1:82119823-82119842 None:intergenic 50.0%
TTAACAGCTAGCATCCGGCA+TGG - chr4_1:82120022-82120041 Msa0577820:intron 50.0%
! ACCATTGCAGCGCAGCTTTT+GGG - chr4_1:82120065-82120084 Msa0577820:CDS 50.0%
! CTTTTGGGCGATCATCGTTG+AGG - chr4_1:82120080-82120099 Msa0577820:intron 50.0%
GTCCACTGGAAAAGTTGGCT+TGG + chr4_1:82120128-82120147 None:intergenic 50.0%
!! GCTGCAGAGAAAGTTTTGGC+AGG - chr4_1:82120423-82120442 Msa0577820:intron 50.0%
! CACCATCCATAAGGCTCTGA+AGG + chr4_1:82120678-82120697 None:intergenic 50.0%
GTCCCTTGCTCATGAACATG+AGG - chr4_1:82120735-82120754 Msa0577820:intron 50.0%
TTCTTGCAGATGCCGGTGAA+TGG + chr4_1:82121011-82121030 None:intergenic 50.0%
TTCACCGGCATCTGCAAGAA+AGG - chr4_1:82121011-82121030 Msa0577820:intron 50.0%
! GCGCTAGCTTCGGTTGAATT+GGG + chr4_1:82121102-82121121 None:intergenic 50.0%
! AGCGCTAGCTTCGGTTGAAT+TGG + chr4_1:82121103-82121122 None:intergenic 50.0%
!! AATGGACTGAGGCAGAAAGC+AGG - chr4_1:82121190-82121209 Msa0577820:intron 50.0%
!! CAGCTCTGAGTTCTTCGGAA+AGG + chr4_1:82121224-82121243 None:intergenic 50.0%
AGGGCTTCAGGATCAACTGA+AGG - chr4_1:82121575-82121594 Msa0577820:intron 50.0%
!! AGAAGGTGTCATCACTGCTC+AGG - chr4_1:82121656-82121675 Msa0577820:intron 50.0%
CAGTGTCAATGGAACAGGCA+AGG + chr4_1:82121800-82121819 None:intergenic 50.0%
! GTGGTGATGTAGTTTGTGCC+AGG - chr4_1:82122202-82122221 Msa0577820:intron 50.0%
! GGCCATATGTTGAATGGGCT+GGG - chr4_1:82122252-82122271 Msa0577820:CDS 50.0%
GTGGGATCTACTCCCAAAAG+TGG + chr4_1:82122352-82122371 None:intergenic 50.0%
ACTGAAGGAATGGGAGTGGA+AGG - chr4_1:82122505-82122524 Msa0577820:CDS 50.0%
GAATGGGAGTGGAAGGAAGA+GGG - chr4_1:82122512-82122531 Msa0577820:CDS 50.0%
AATGGGAGTGGAAGGAAGAG+GGG - chr4_1:82122513-82122532 Msa0577820:CDS 50.0%
TGCAGAACAGGAAGCTGCAA+AGG - chr4_1:82122792-82122811 Msa0577820:intron 50.0%
ATGGTGAGAGGGAGGCTTAG+GGG + chr4_1:82115520-82115539 None:intergenic 55.0%
AGAGGGTTATGGTGAGAGGG+AGG + chr4_1:82115528-82115547 None:intergenic 55.0%
CACACTACCTCCTCCGATTC+CGG - chr4_1:82115570-82115589 Msa0577820:CDS 55.0%
AACCACCTTGACGCCGGAAT+CGG + chr4_1:82115586-82115605 None:intergenic 55.0%
!! TCGACCTCCAAAGCATTGGG+AGG + chr4_1:82116127-82116146 None:intergenic 55.0%
TGCAGCAGGATACCGTCTGA+AGG - chr4_1:82118456-82118475 Msa0577820:CDS 55.0%
GGATACCGTCTGAAGGAAGC+TGG - chr4_1:82118463-82118482 Msa0577820:CDS 55.0%
CGTCAGTGAGAACCATGTGC+AGG - chr4_1:82118709-82118728 Msa0577820:CDS 55.0%
! GCTTTGCGCTATTTCCCCTG+CGG - chr4_1:82119163-82119182 Msa0577820:intron 55.0%
! GCACTGGCCAGGAAAAGAGA+AGG + chr4_1:82119434-82119453 None:intergenic 55.0%
! CATTTTACGCCGAGGCTAGC+AGG + chr4_1:82119776-82119795 None:intergenic 55.0%
ACTGGGAGGTGGGGATTTGA+GGG + chr4_1:82119813-82119832 None:intergenic 55.0%
TGGTGAAACACTGGGAGGTG+GGG + chr4_1:82119822-82119841 None:intergenic 55.0%
! GTTGGTGAAACACTGGGAGG+TGG + chr4_1:82119824-82119843 None:intergenic 55.0%
CAAAAGCTGCGCTGCAATGG+TGG + chr4_1:82120066-82120085 None:intergenic 55.0%
! CACCATTGCAGCGCAGCTTT+TGG - chr4_1:82120064-82120083 Msa0577820:CDS 55.0%
GCAGACTCAGGGCAATCAAC+AGG + chr4_1:82120292-82120311 None:intergenic 55.0%
TCAGCGCCTTCAGAGCCTTA+TGG - chr4_1:82120669-82120688 Msa0577820:CDS 55.0%
! CGCCTTCAGAGCCTTATGGA+TGG - chr4_1:82120673-82120692 Msa0577820:CDS 55.0%
!! TGGGGAGAGGGAAGTGCTAA+TGG - chr4_1:82120942-82120961 Msa0577820:intron 55.0%
! TCTGAAGCAGTGCAAGCTGC+AGG - chr4_1:82121603-82121622 Msa0577820:intron 55.0%
!! GTTTGTGCCAGGGAGCATCT+TGG - chr4_1:82122213-82122232 Msa0577820:intron 55.0%
GGGCCATATGTTGAATGGGC+TGG - chr4_1:82122251-82122270 Msa0577820:CDS 55.0%
GGAATGGGAGTGGAAGGAAG+AGG - chr4_1:82122511-82122530 Msa0577820:CDS 55.0%
TGATCTGCAGAAGCGGGCAA+TGG - chr4_1:82122768-82122787 Msa0577820:intron 55.0%
TGGTGAGAGGGAGGCTTAGG+GGG + chr4_1:82115519-82115538 None:intergenic 60.0%
GGGAGGACCCCACATAGTGT+AGG + chr4_1:82116110-82116129 None:intergenic 60.0%
GTGGGGTCCTCCCAATGCTT+TGG - chr4_1:82116117-82116136 Msa0577820:intron 60.0%
GGGTCCTCCCAATGCTTTGG+AGG - chr4_1:82116120-82116139 Msa0577820:intron 60.0%
AGCATGTTGCTGTGGCCCTG+TGG - chr4_1:82117067-82117086 Msa0577820:CDS 60.0%
GCATGTTGCTGTGGCCCTGT+GGG - chr4_1:82117068-82117087 Msa0577820:CDS 60.0%
! GCGCTATTTCCCCTGCGGAA+AGG - chr4_1:82119168-82119187 Msa0577820:intron 60.0%
GCTGCTGAATGGCCTCCACT+TGG + chr4_1:82119536-82119555 None:intergenic 60.0%
GAGGTGGGGATTTGAGGGTG+GGG + chr4_1:82119808-82119827 None:intergenic 60.0%
GGAGGTGGGGATTTGAGGGT+GGG + chr4_1:82119809-82119828 None:intergenic 60.0%
CACTGGGAGGTGGGGATTTG+AGG + chr4_1:82119814-82119833 None:intergenic 60.0%
GCCCAAAAGCTGCGCTGCAA+TGG + chr4_1:82120069-82120088 None:intergenic 60.0%
GGACTGAGGCAGAAAGCAGG+TGG - chr4_1:82121193-82121212 Msa0577820:intron 60.0%
GCGGGCAATGGATGCAGAAC+AGG - chr4_1:82122780-82122799 Msa0577820:intron 60.0%
CTTGACGCCGGAATCGGAGG+AGG + chr4_1:82115580-82115599 None:intergenic 65.0%
CTCCTCCGATTCCGGCGTCA+AGG - chr4_1:82115578-82115597 Msa0577820:CDS 65.0%
CACCTTGACGCCGGAATCGG+AGG + chr4_1:82115583-82115602 None:intergenic 65.0%
CTCCGATTCCGGCGTCAAGG+TGG - chr4_1:82115581-82115600 Msa0577820:CDS 65.0%
GGGAGGTGGGGATTTGAGGG+TGG + chr4_1:82119810-82119829 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 82115319 82123138 82115319 ID=Msa0577820;Name=Msa0577820
chr4_1 mRNA 82115319 82123138 82115319 ID=Msa0577820-mRNA-1;Parent=Msa0577820;Name=Msa0577820-mRNA-1;_AED=0.10;_eAED=0.10;_QI=113|0.85|0.93|1|1|1|15|67|1112
chr4_1 exon 82115319 82115679 82115319 ID=Msa0577820-mRNA-1:exon:29713;Parent=Msa0577820-mRNA-1
chr4_1 exon 82116780 82117619 82116780 ID=Msa0577820-mRNA-1:exon:29712;Parent=Msa0577820-mRNA-1
chr4_1 exon 82117701 82117853 82117701 ID=Msa0577820-mRNA-1:exon:29711;Parent=Msa0577820-mRNA-1
chr4_1 exon 82117936 82118034 82117936 ID=Msa0577820-mRNA-1:exon:29710;Parent=Msa0577820-mRNA-1
chr4_1 exon 82118118 82118960 82118118 ID=Msa0577820-mRNA-1:exon:29709;Parent=Msa0577820-mRNA-1
chr4_1 exon 82119051 82119180 82119051 ID=Msa0577820-mRNA-1:exon:29708;Parent=Msa0577820-mRNA-1
chr4_1 exon 82119268 82119417 82119268 ID=Msa0577820-mRNA-1:exon:29707;Parent=Msa0577820-mRNA-1
chr4_1 exon 82120026 82120087 82120026 ID=Msa0577820-mRNA-1:exon:29706;Parent=Msa0577820-mRNA-1
chr4_1 exon 82120640 82120735 82120640 ID=Msa0577820-mRNA-1:exon:29705;Parent=Msa0577820-mRNA-1
chr4_1 exon 82121762 82121854 82121762 ID=Msa0577820-mRNA-1:exon:29704;Parent=Msa0577820-mRNA-1
chr4_1 exon 82122082 82122141 82122082 ID=Msa0577820-mRNA-1:exon:29703;Parent=Msa0577820-mRNA-1
chr4_1 exon 82122238 82122366 82122238 ID=Msa0577820-mRNA-1:exon:29702;Parent=Msa0577820-mRNA-1
chr4_1 exon 82122454 82122537 82122454 ID=Msa0577820-mRNA-1:exon:29701;Parent=Msa0577820-mRNA-1
chr4_1 exon 82122629 82122766 82122629 ID=Msa0577820-mRNA-1:exon:29700;Parent=Msa0577820-mRNA-1
chr4_1 exon 82122858 82123138 82122858 ID=Msa0577820-mRNA-1:exon:29699;Parent=Msa0577820-mRNA-1
chr4_1 five_prime_UTR 82123026 82123138 82123026 ID=Msa0577820-mRNA-1:five_prime_utr;Parent=Msa0577820-mRNA-1
chr4_1 CDS 82122858 82123025 82122858 ID=Msa0577820-mRNA-1:cds;Parent=Msa0577820-mRNA-1
chr4_1 CDS 82122629 82122766 82122629 ID=Msa0577820-mRNA-1:cds;Parent=Msa0577820-mRNA-1
chr4_1 CDS 82122454 82122537 82122454 ID=Msa0577820-mRNA-1:cds;Parent=Msa0577820-mRNA-1
chr4_1 CDS 82122238 82122366 82122238 ID=Msa0577820-mRNA-1:cds;Parent=Msa0577820-mRNA-1
chr4_1 CDS 82122082 82122141 82122082 ID=Msa0577820-mRNA-1:cds;Parent=Msa0577820-mRNA-1
chr4_1 CDS 82121762 82121854 82121762 ID=Msa0577820-mRNA-1:cds;Parent=Msa0577820-mRNA-1
chr4_1 CDS 82120640 82120735 82120640 ID=Msa0577820-mRNA-1:cds;Parent=Msa0577820-mRNA-1
chr4_1 CDS 82120026 82120087 82120026 ID=Msa0577820-mRNA-1:cds;Parent=Msa0577820-mRNA-1
chr4_1 CDS 82119268 82119417 82119268 ID=Msa0577820-mRNA-1:cds;Parent=Msa0577820-mRNA-1
chr4_1 CDS 82119051 82119180 82119051 ID=Msa0577820-mRNA-1:cds;Parent=Msa0577820-mRNA-1
chr4_1 CDS 82118118 82118960 82118118 ID=Msa0577820-mRNA-1:cds;Parent=Msa0577820-mRNA-1
chr4_1 CDS 82117936 82118034 82117936 ID=Msa0577820-mRNA-1:cds;Parent=Msa0577820-mRNA-1
chr4_1 CDS 82117701 82117853 82117701 ID=Msa0577820-mRNA-1:cds;Parent=Msa0577820-mRNA-1
chr4_1 CDS 82116780 82117619 82116780 ID=Msa0577820-mRNA-1:cds;Parent=Msa0577820-mRNA-1
chr4_1 CDS 82115386 82115679 82115386 ID=Msa0577820-mRNA-1:cds;Parent=Msa0577820-mRNA-1
chr4_1 three_prime_UTR 82115319 82115385 82115319 ID=Msa0577820-mRNA-1:three_prime_utr;Parent=Msa0577820-mRNA-1
Gene Sequence

>Msa0577820

ATGACAATGAAGAATTTGCCGACTGTACCAAGAAATTCAAACCCTAAATCAACGCATAAGCACAAATTCAACAAAGAGAATAAACCCCCTAAGCCTCCCTCTCACCATAACCCTCTCAAACGCAAGCTCGATGATACTCACACTACCTCCTCCGATTCCGGCGTCAAGGTTATTGTGAGGATGAAACCAGTGAGCAGTGAAAAAGACGAAGCAGATTCCATTGTTAAGAAAATTTCCAGCAATTCTTTGTCAATCAACGGTCAGGATTTCACCTTTGATTCCATCGCTCACATTGATGCTACTCAGCTTGATATTTTTGAGCTTATTGGTATGCCTCTAGTAGAGAATTGTTTGGCTGGGTTCAATAGTTCTGTTTTTGCTTATGGGCAGACTGGAAGTGGGAAGACCTACACTATGTGGGGTCCTCCCAATGCTTTGGAGGTCGAAAATTCATCAATTGATCAACAAGGAGGTCTCGCCCCTCGTGTTTTTGAGCGACTCTTTGCACGCCTAAATGAAGAGCAAACTAAGCACTCCGACAAGCAACTCAAGTATCAATGTCACTGTTCATTTCTTGAGATTAGAGAAGATGTTAAATCTGGAATCTACGTCGAGAATCTTACAGAGGAGCATGTTTTTACTGTGAAGGATGTAAATCAGCTTTTGATGAAGGGATTGTTAAACAGAACAATAGGTGCAACCAGTGTAAATTCTGAAAGCTCCCGTTCACACACTGTTTTTACTTGTGTTGTTGAATCTCGATGCAAGAGTATTGAAGATCGTAAAAGCAGATTTAAAACAAGTAAAATCAATCTCGTTGATTTAGCTGGGAATCTGATTAACATTCTTGCTGAAGTTTCTCAGACAGGAAAGCAGCGGCATATACCATACAGGGACTCCAAGTTGACATTTTTATTGCAGGAGTCTCTGGGTGGAAATGCAAAATTAACATTGCTTTGCGCTATTTCCCCTGCGGAAAGTTGTAGGAGTGAAACTTTTAGTACATTGAGATTTGCACAACGTGTCAAAGCTATCAAGAACAAAGCGGTTGTAAATGAAGTAATGCATGATGATGTGAACCAATTGCGTGAAGTAATACGCGAACTCAAGGATGAGCTGCATCGAGTTAAAACAAAGGGTTACAATCCAAGTGGAGGCCATTCAGCAGCTTTGATCCGAAGAAGTTTGTGTTTATTGCAGCCTAGACTCCACTACCCATTATCACTACCTCATGTTGATGAAGATGGCGATGAGGAGATGGAGATTGTCGAGGATGGTGTTGAAGATCATGCCAGAATTCTCGGCAATTCGAGCAGAGATTGTGCTGGTTTTTCTGACACTAAGCGATACATTGATTTTCCTAATGCTACAATGAACTGTGATAACCCTGCTAGCCTCGGCGTAAAATGTGCTACTGACCCCACCCTCAAATCCCCACCTCCCAGTGTTTCACCAACAATCAGCAGCAGCAGAAAAAGTTTGAAGACCTTATCAAAGCTGTCCCCATCTCAGAATAACCTTCATTGTGAAAGTGACTTAGGCATGATGCCGGTCACAAAGACTGTTGATCAGAAAAGCATGTCTAATGCTCTGTCTAGCCTGAAAGCTTCAAATTTCCTTACTAAAACTGAGAACTTAACAGCTAGCATCCGGCATGGTCTTGAAACTATTGATAACCACCATTGCAGCGCAGCTTTTGGGCGATCATCGTTGAGGCTCTCATTGAGACCTGAAGATTCCAAGCCAACTTTTCCAGTGGACAAAGTTAATGTGGGAGTACAGACTTTCGTCGATGATAATGCTGGAAAAGAAGATTCTGTTATGTTGAACTGTAATAACTGTAAAATCAGAATGCAGCTTGATGTCAGTAAGATTGACAATAACTCAAACATGCAAATGATACCTGTTGATTGCCCTGAGTCTGCTGATAAACCAAAGAAGCAAGTTCTCAAAGCTGCAGAGAAAGTTTTGGCAGGATCCATAAGGAGAGAAATGGCTCTGGAAGAGTTATGTGCAAAGCAGACTTCTGAGATAATGCAGCTCAATCACTTATTGGAACAATACAAGCATGAGAGGGAATGCAATGCCGTAATAGGTCAGACAAGGGAAGGTAAAATTCAGCGCCTTCAGAGCCTTATGGATGGTGTTTTACCCACTGAGAAATTCATGAGCGAAGAACTAGTGTCCCTTGCTCATGAACATGAGCTTTTGAAGGAGAACTATGAGCATCATCCAGAAGTTCTGAAGATGAAGATAGAGTTAAAAAGAGTACAAGATAAGCTACAAGAGTATCAGAATTTCTATGAATTTGGGGAGAGGGAAGTGCTAATGGAAGAGATATGTAATTTAAGAAATCAGCTTCATTTTTATATAGACCATTCACCGGCATCTGCAAGAAAGGAATATCCATTGTTGCAGTTGCCTAATTCATCTGAACCTAGATTGGTAGCAAACCTAACTGCCAATCCCAATTCAACCGAAGCTAGCGCTGAAGCAAATGACAATCCAGAATCAACTGAAGACAGTGCCAAAGTAAAACTTGAACAGGAAAGAAGTGAATGGACTGAGGCAGAAAGCAGGTGGATTTCCCTTTCCGAAGAACTCAGAGCTGAAGTTGAAGCTAACAAGTCGTTAGCTGAAAAGAGGAAGCGTGAATTAGATGCCGAGAAGAAGTTTTCCAAGGAACTGAAGGATGCAATGCAAATAGCTATAGAAGGCCATGCACGGATTTTAGAACAGTATGCAGATTTGGAGGAGAAACATGTTCAGTTGCTTGAAAGGCATAGAAAGATCCATGATGGAATTGATGATATAAAGAAAGCAGCTTCCAGAACAGCAGTAAGAAGTGCAGAGTCTAAACTCATAACTACCCTTGCAGCAGAAATTTCAGCATTAAAAGCAGAAAAAGAAGCAGAAAGGAGAATCCTAGTAGATGAAAATAGAGGGCTTCAGGATCAACTGAAGGATACTTCTGAAGCAGTGCAAGCTGCAGGTGAACTGCTTGTACGTCTTAAAGAAGCAGAAGAAGGTGTCATCACTGCTCAGAAGCGGGCAATGGATGCAGAACAGGAAGCTGCAAAGGCCTACAAACAAATTGATAAATTGAAGAAGAAATACGAGATTGAGATTAGTACACTCAATGATCTCCTTGCCAAATCACGTTTGCCTATGGAAGAAGCAATACAACCTACTTGTAATGATCTTGTCATGCCTACTGATTATGACACCAAGGTTGCACACAATGTTAATCAATTTGAGCCATCTTATAATAAAGACGATGGTGAGCTTGCTAAATTAGAACAGTCATGGTTCTCTGGTTCTGACATATGCAACATATAG
Protein sequence

>Msa0577820

MTMKNLPTVPRNSNPKSTHKHKFNKENKPPKPPSHHNPLKRKLDDTHTTSSDSGVKVIVRMKPVSSEKDEADSIVKKISSNSLSINGQDFTFDSIAHIDATQLDIFELIGMPLVENCLAGFNSSVFAYGQTGSGKTYTMWGPPNALEVENSSIDQQGGLAPRVFERLFARLNEEQTKHSDKQLKYQCHCSFLEIREDVKSGIYVENLTEEHVFTVKDVNQLLMKGLLNRTIGATSVNSESSRSHTVFTCVVESRCKSIEDRKSRFKTSKINLVDLAGNLINILAEVSQTGKQRHIPYRDSKLTFLLQESLGGNAKLTLLCAISPAESCRSETFSTLRFAQRVKAIKNKAVVNEVMHDDVNQLREVIRELKDELHRVKTKGYNPSGGHSAALIRRSLCLLQPRLHYPLSLPHVDEDGDEEMEIVEDGVEDHARILGNSSRDCAGFSDTKRYIDFPNATMNCDNPASLGVKCATDPTLKSPPPSVSPTISSSRKSLKTLSKLSPSQNNLHCESDLGMMPVTKTVDQKSMSNALSSLKASNFLTKTENLTASIRHGLETIDNHHCSAAFGRSSLRLSLRPEDSKPTFPVDKVNVGVQTFVDDNAGKEDSVMLNCNNCKIRMQLDVSKIDNNSNMQMIPVDCPESADKPKKQVLKAAEKVLAGSIRREMALEELCAKQTSEIMQLNHLLEQYKHERECNAVIGQTREGKIQRLQSLMDGVLPTEKFMSEELVSLAHEHELLKENYEHHPEVLKMKIELKRVQDKLQEYQNFYEFGEREVLMEEICNLRNQLHFYIDHSPASARKEYPLLQLPNSSEPRLVANLTANPNSTEASAEANDNPESTEDSAKVKLEQERSEWTEAESRWISLSEELRAEVEANKSLAEKRKRELDAEKKFSKELKDAMQIAIEGHARILEQYADLEEKHVQLLERHRKIHDGIDDIKKAASRTAVRSAESKLITTLAAEISALKAEKEAERRILVDENRGLQDQLKDTSEAVQAAGELLVRLKEAEEGVITAQKRAMDAEQEAAKAYKQIDKLKKKYEIEISTLNDLLAKSRLPMEEAIQPTCNDLVMPTDYDTKVAHNVNQFEPSYNKDDGELAKLEQSWFSGSDICNI*