Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231860 | NP_001345025.1 | 100.000 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 0.0 | 780 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231860 | sp|P30173|ACT13_SOLTU | 94.430 | 377 | 21 | 0 | 1 | 377 | 1 | 377 | 0.0 | 752 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231860 | A0A4D6KPJ4 | 100.000 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 0.0 | 780 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008850 | Msa0231860 | -0.826555 | 2.543424e-54 | -8.615850e-47 |
| Msa0017120 | Msa0231860 | -0.807423 | 5.092921e-50 | -8.615850e-47 |
| Msa0036580 | Msa0231860 | 0.808900 | 2.467328e-50 | -8.615850e-47 |
| Msa0039200 | Msa0231860 | -0.817660 | 2.939422e-52 | -8.615850e-47 |
| Msa0047470 | Msa0231860 | -0.822372 | 2.453266e-53 | -8.615850e-47 |
| Msa0055280 | Msa0231860 | -0.821221 | 4.531347e-53 | -8.615850e-47 |
| Msa0057740 | Msa0231860 | -0.808850 | 2.529318e-50 | -8.615850e-47 |
| Msa0061600 | Msa0231860 | 0.812628 | 3.852683e-51 | -8.615850e-47 |
| Msa0062750 | Msa0231860 | -0.803225 | 3.858539e-49 | -8.615850e-47 |
| Msa0068410 | Msa0231860 | -0.803641 | 3.163710e-49 | -8.615850e-47 |
| Msa0084680 | Msa0231860 | -0.807134 | 5.863049e-50 | -8.615850e-47 |
| Msa0086820 | Msa0231860 | -0.817850 | 2.662835e-52 | -8.615850e-47 |
| Msa0100250 | Msa0231860 | -0.819665 | 1.030907e-52 | -8.615850e-47 |
| Msa0101060 | Msa0231860 | -0.821002 | 5.089618e-53 | -8.615850e-47 |
| Msa0103060 | Msa0231860 | -0.816106 | 6.561969e-52 | -8.615850e-47 |
| Msa0133670 | Msa0231860 | -0.820062 | 8.365717e-53 | -8.615850e-47 |
| Msa0133880 | Msa0231860 | -0.827578 | 1.447719e-54 | -8.615850e-47 |
| Msa0139270 | Msa0231860 | 0.801532 | 8.612261e-49 | -8.615850e-47 |
| Msa0141550 | Msa0231860 | -0.808364 | 3.211816e-50 | -8.615850e-47 |
| Msa0153640 | Msa0231860 | -0.807463 | 4.993829e-50 | -8.615850e-47 |
| Msa0164360 | Msa0231860 | -0.804042 | 2.611323e-49 | -8.615850e-47 |
| Msa0175530 | Msa0231860 | -0.800690 | 1.280618e-48 | -8.615850e-47 |
| Msa0176620 | Msa0231860 | 0.820560 | 6.430306e-53 | -8.615850e-47 |
| Msa0184120 | Msa0231860 | -0.820789 | 5.698458e-53 | -8.615850e-47 |
| Msa0185390 | Msa0231860 | -0.850609 | 1.520458e-60 | -8.615850e-47 |
| Msa0197750 | Msa0231860 | 0.802210 | 6.250897e-49 | -8.615850e-47 |
| Msa0197940 | Msa0231860 | 0.801482 | 8.818421e-49 | -8.615850e-47 |
| Msa0218860 | Msa0231860 | -0.802116 | 6.535626e-49 | -8.615850e-47 |
| Msa0222070 | Msa0231860 | -0.847663 | 1.003158e-59 | -8.615850e-47 |
| Msa0222120 | Msa0231860 | -0.848782 | 4.921038e-60 | -8.615850e-47 |
| Msa0223100 | Msa0231860 | -0.822302 | 2.548035e-53 | -8.615850e-47 |
| Msa0223380 | Msa0231860 | -0.800624 | 1.320619e-48 | -8.615850e-47 |
| Msa0223960 | Msa0231860 | -0.802953 | 4.392730e-49 | -8.615850e-47 |
| Msa0227290 | Msa0231860 | -0.844899 | 5.679789e-59 | -8.615850e-47 |
| Msa0231860 | Msa0251150 | -0.810821 | 9.523734e-51 | -8.615850e-47 |
| Msa0231860 | Msa0252180 | -0.806128 | 9.560524e-50 | -8.615850e-47 |
| Msa0231860 | Msa0263620 | -0.843753 | 1.154132e-58 | -8.615850e-47 |
| Msa0231860 | Msa0264940 | 0.808448 | 3.081993e-50 | -8.615850e-47 |
| Msa0231860 | Msa0265210 | -0.813048 | 3.116617e-51 | -8.615850e-47 |
| Msa0231860 | Msa0282860 | -0.813343 | 2.685946e-51 | -8.615850e-47 |
| Msa0231860 | Msa0284870 | -0.806304 | 8.779330e-50 | -8.615850e-47 |
| Msa0231860 | Msa0295240 | -0.803851 | 2.862212e-49 | -8.615850e-47 |
| Msa0231860 | Msa0295520 | -0.809014 | 2.332160e-50 | -8.615850e-47 |
| Msa0231860 | Msa0295840 | -0.811647 | 6.305857e-51 | -8.615850e-47 |
| Msa0231860 | Msa0296610 | -0.806667 | 7.357933e-50 | -8.615850e-47 |
| Msa0231860 | Msa0301460 | -0.815430 | 9.281838e-52 | -8.615850e-47 |
| Msa0231860 | Msa0302990 | 0.807234 | 5.584327e-50 | -8.615850e-47 |
| Msa0231860 | Msa0309930 | 0.888629 | 4.984482e-73 | -8.615850e-47 |
| Msa0231860 | Msa0323630 | -0.803180 | 3.942532e-49 | -8.615850e-47 |
| Msa0231860 | Msa0336270 | -0.820279 | 7.458672e-53 | -8.615850e-47 |
| Msa0231860 | Msa0339870 | -0.814663 | 1.373430e-51 | -8.615850e-47 |
| Msa0231860 | Msa0369780 | -0.841687 | 4.084929e-58 | -8.615850e-47 |
| Msa0231860 | Msa0375060 | 0.811073 | 8.402729e-51 | -8.615850e-47 |
| Msa0231860 | Msa0375430 | -0.816899 | 4.358283e-52 | -8.615850e-47 |
| Msa0231860 | Msa0382500 | -0.805141 | 1.540773e-49 | -8.615850e-47 |
| Msa0231860 | Msa0389830 | -0.813469 | 2.519958e-51 | -8.615850e-47 |
| Msa0231860 | Msa0413740 | -0.804731 | 1.876974e-49 | -8.615850e-47 |
| Msa0231860 | Msa0417150 | -0.836254 | 1.042088e-56 | -8.615850e-47 |
| Msa0231860 | Msa0421800 | -0.834873 | 2.330442e-56 | -8.615850e-47 |
| Msa0231860 | Msa0423600 | -0.854031 | 1.613757e-61 | -8.615850e-47 |
| Msa0231860 | Msa0427050 | -0.841489 | 4.608348e-58 | -8.615850e-47 |
| Msa0231860 | Msa0427590 | -0.802231 | 6.189032e-49 | -8.615850e-47 |
| Msa0231860 | Msa0431520 | -0.806188 | 9.286593e-50 | -8.615850e-47 |
| Msa0231860 | Msa0431830 | -0.805505 | 1.292095e-49 | -8.615850e-47 |
| Msa0231860 | Msa0432680 | -0.808777 | 2.621945e-50 | -8.615850e-47 |
| Msa0231860 | Msa0456480 | -0.812440 | 4.236132e-51 | -8.615850e-47 |
| Msa0231860 | Msa0458790 | -0.815226 | 1.030482e-51 | -8.615850e-47 |
| Msa0231860 | Msa0459120 | -0.813186 | 2.906922e-51 | -8.615850e-47 |
| Msa0231860 | Msa0463540 | -0.833991 | 3.879649e-56 | -8.615850e-47 |
| Msa0231860 | Msa0463990 | -0.827784 | 1.291810e-54 | -8.615850e-47 |
| Msa0231860 | Msa0467800 | -0.840137 | 1.042263e-57 | -8.615850e-47 |
| Msa0231860 | Msa0467880 | -0.838360 | 3.012613e-57 | -8.615850e-47 |
| Msa0231860 | Msa0470650 | -0.814896 | 1.220011e-51 | -8.615850e-47 |
| Msa0231860 | Msa0473450 | -0.807209 | 5.653364e-50 | -8.615850e-47 |
| Msa0231860 | Msa0505390 | -0.804170 | 2.457020e-49 | -8.615850e-47 |
| Msa0231860 | Msa0505660 | -0.815306 | 9.890571e-52 | -8.615850e-47 |
| Msa0231860 | Msa0509540 | -0.843903 | 1.052320e-58 | -8.615850e-47 |
| Msa0231860 | Msa0514260 | -0.841083 | 5.891519e-58 | -8.615850e-47 |
| Msa0231860 | Msa0515680 | -0.816895 | 4.367387e-52 | -8.615850e-47 |
| Msa0231860 | Msa0515830 | -0.803796 | 2.938287e-49 | -8.615850e-47 |
| Msa0231860 | Msa0518160 | -0.804527 | 2.069942e-49 | -8.615850e-47 |
| Msa0231860 | Msa0524050 | -0.807910 | 4.012365e-50 | -8.615850e-47 |
| Msa0231860 | Msa0524090 | -0.811238 | 7.738325e-51 | -8.615850e-47 |
| Msa0231860 | Msa0524120 | -0.829635 | 4.611355e-55 | -8.615850e-47 |
| Msa0231860 | Msa0533510 | 0.803933 | 2.751819e-49 | -8.615850e-47 |
| Msa0231860 | Msa0542040 | -0.825788 | 3.872091e-54 | -8.615850e-47 |
| Msa0231860 | Msa0546740 | -0.811517 | 6.730630e-51 | -8.615850e-47 |
| Msa0231860 | Msa0553520 | -0.806145 | 9.481054e-50 | -8.615850e-47 |
| Msa0231860 | Msa0576420 | -0.816570 | 5.165392e-52 | -8.615850e-47 |
| Msa0231860 | Msa0579340 | -0.801506 | 8.720185e-49 | -8.615850e-47 |
| Msa0231860 | Msa0595780 | -0.806819 | 6.834179e-50 | -8.615850e-47 |
| Msa0231860 | Msa0598250 | -0.864713 | 9.976549e-65 | -8.615850e-47 |
| Msa0231860 | Msa0600390 | -0.803252 | 3.808865e-49 | -8.615850e-47 |
| Msa0231860 | Msa0605230 | -0.829301 | 5.558138e-55 | -8.615850e-47 |
| Msa0231860 | Msa0606060 | -0.829986 | 3.785476e-55 | -8.615850e-47 |
| Msa0231860 | Msa0607280 | -0.804114 | 2.523178e-49 | -8.615850e-47 |
| Msa0231860 | Msa0607300 | -0.807816 | 4.201493e-50 | -8.615850e-47 |
| Msa0231860 | Msa0617370 | -0.802133 | 6.482514e-49 | -8.615850e-47 |
| Msa0231860 | Msa0619330 | -0.823175 | 1.595809e-53 | -8.615850e-47 |
| Msa0231860 | Msa0620640 | -0.812866 | 3.416757e-51 | -8.615850e-47 |
| Msa0231860 | Msa0621770 | -0.809762 | 1.612062e-50 | -8.615850e-47 |
| Msa0231860 | Msa0635990 | -0.837128 | 6.239474e-57 | -8.615850e-47 |
| Msa0231860 | Msa0638040 | -0.833301 | 5.769131e-56 | -8.615850e-47 |
| Msa0231860 | Msa0640880 | -0.805178 | 1.513367e-49 | -8.615850e-47 |
| Msa0231860 | Msa0647000 | -0.811334 | 7.375576e-51 | -8.615850e-47 |
| Msa0231860 | Msa0653710 | -0.830707 | 2.523010e-55 | -8.615850e-47 |
| Msa0231860 | Msa0654060 | -0.820772 | 5.747537e-53 | -8.615850e-47 |
| Msa0231860 | Msa0655660 | 0.848780 | 4.929221e-60 | -8.615850e-47 |
| Msa0231860 | Msa0656270 | -0.801364 | 9.325531e-49 | -8.615850e-47 |
| Msa0231860 | Msa0681890 | -0.809413 | 1.916140e-50 | -8.615850e-47 |
| Msa0231860 | Msa0684600 | 0.803540 | 3.320363e-49 | -8.615850e-47 |
| Msa0231860 | Msa0686610 | -0.828202 | 1.024722e-54 | -8.615850e-47 |
| Msa0231860 | Msa0690350 | -0.813305 | 2.737435e-51 | -8.615850e-47 |
| Msa0231860 | Msa0698900 | -0.808843 | 2.537174e-50 | -8.615850e-47 |
| Msa0231860 | Msa0699530 | 0.811953 | 5.409163e-51 | -8.615850e-47 |
| Msa0231860 | Msa0700070 | -0.800075 | 1.708338e-48 | -8.615850e-47 |
| Msa0231860 | Msa0707780 | -0.804137 | 2.495000e-49 | -8.615850e-47 |
| Msa0231860 | Msa0714600 | -0.802054 | 6.728896e-49 | -8.615850e-47 |
| Msa0231860 | Msa0719340 | -0.822430 | 2.378551e-53 | -8.615850e-47 |
| Msa0231860 | Msa0724050 | -0.844713 | 6.376273e-59 | -8.615850e-47 |
| Msa0231860 | Msa0726610 | -0.820207 | 7.747542e-53 | -8.615850e-47 |
| Msa0231860 | Msa0730180 | -0.811642 | 6.320465e-51 | -8.615850e-47 |
| Msa0231860 | Msa0733000 | -0.835368 | 1.748217e-56 | -8.615850e-47 |
| Msa0231860 | Msa0739610 | -0.824522 | 7.713811e-54 | -8.615850e-47 |
| Msa0231860 | Msa0743640 | -0.808687 | 2.740414e-50 | -8.615850e-47 |
| Msa0231860 | Msa0757990 | 0.802114 | 6.540986e-49 | -8.615850e-47 |
| Msa0231860 | Msa0763880 | -0.841002 | 6.185795e-58 | -8.615850e-47 |
| Msa0231860 | Msa0763910 | -0.833966 | 3.936387e-56 | -8.615850e-47 |
| Msa0231860 | Msa0766880 | -0.806419 | 8.301989e-50 | -8.615850e-47 |
| Msa0231860 | Msa0772150 | -0.832735 | 7.978432e-56 | -8.615850e-47 |
| Msa0231860 | Msa0772210 | -0.842977 | 1.859338e-58 | -8.615850e-47 |
| Msa0231860 | Msa0774810 | 0.803559 | 3.290773e-49 | -8.615850e-47 |
| Msa0231860 | Msa0782030 | -0.826317 | 2.898532e-54 | -8.615850e-47 |
| Msa0231860 | Msa0793060 | -0.844700 | 6.427554e-59 | -8.615850e-47 |
| Msa0231860 | Msa0796450 | -0.809555 | 1.786093e-50 | -8.615850e-47 |
| Msa0231860 | Msa0811510 | -0.830601 | 2.678441e-55 | -8.615850e-47 |
| Msa0231860 | Msa0815950 | -0.811035 | 8.562493e-51 | -8.615850e-47 |
| Msa0231860 | Msa0824770 | -0.809005 | 2.343038e-50 | -8.615850e-47 |
| Msa0231860 | Msa0844100 | -0.830221 | 3.317304e-55 | -8.615850e-47 |
| Msa0231860 | Msa0851740 | -0.830542 | 2.768853e-55 | -8.615850e-47 |
| Msa0231860 | Msa0863760 | -0.808840 | 2.541588e-50 | -8.615850e-47 |
| Msa0231860 | Msa0887070 | -0.836941 | 6.964958e-57 | -8.615850e-47 |
| Msa0231860 | Msa0906720 | -0.817140 | 3.848702e-52 | -8.615850e-47 |
| Msa0231860 | Msa0913120 | -0.801709 | 7.922934e-49 | -8.615850e-47 |
| Msa0231860 | Msa0934830 | -0.821128 | 4.759730e-53 | -8.615850e-47 |
| Msa0231860 | Msa0950410 | -0.811294 | 7.523044e-51 | -8.615850e-47 |
| Msa0231860 | Msa0955260 | -0.809998 | 1.434240e-50 | -8.615850e-47 |
| Msa0231860 | Msa0967450 | -0.813921 | 2.004128e-51 | -8.615850e-47 |
| Msa0231860 | Msa0971860 | -0.832635 | 8.449577e-56 | -8.615850e-47 |
| Msa0231860 | Msa0975910 | -0.801777 | 7.671069e-49 | -8.615850e-47 |
| Msa0231860 | Msa0978000 | -0.816991 | 4.156572e-52 | -8.615850e-47 |
| Msa0231860 | Msa0981770 | -0.808244 | 3.406753e-50 | -8.615850e-47 |
| Msa0231860 | Msa1001780 | -0.843165 | 1.656717e-58 | -8.615850e-47 |
| Msa0231860 | Msa1015060 | -0.804400 | 2.199876e-49 | -8.615850e-47 |
| Msa0231860 | Msa1016110 | -0.807877 | 4.077226e-50 | -8.615850e-47 |
| Msa0231860 | Msa1030430 | -0.852125 | 5.668567e-61 | -8.615850e-47 |
| Msa0231860 | Msa1033160 | -0.808774 | 2.624980e-50 | -8.615850e-47 |
| Msa0231860 | Msa1037060 | 0.811390 | 7.170891e-51 | -8.615850e-47 |
| Msa0231860 | Msa1038320 | -0.849250 | 3.647752e-60 | -8.615850e-47 |
| Msa0231860 | Msa1040730 | 0.847086 | 1.444821e-59 | -8.615850e-47 |
| Msa0231860 | Msa1043870 | -0.818167 | 2.257630e-52 | -8.615850e-47 |
| Msa0231860 | Msa1044040 | -0.830901 | 2.262206e-55 | -8.615850e-47 |
| Msa0231860 | Msa1055360 | -0.814172 | 1.763537e-51 | -8.615850e-47 |
| Msa0231860 | Msa1064210 | -0.815959 | 7.074788e-52 | -8.615850e-47 |
| Msa0231860 | Msa1067910 | -0.811005 | 8.692734e-51 | -8.615850e-47 |
| Msa0231860 | Msa1069440 | -0.800471 | 1.419379e-48 | -8.615850e-47 |
| Msa0231860 | Msa1072350 | -0.816180 | 6.317377e-52 | -8.615850e-47 |
| Msa0231860 | Msa1079610 | -0.830890 | 2.276084e-55 | -8.615850e-47 |
| Msa0231860 | Msa1082820 | 0.824413 | 8.182430e-54 | -8.615850e-47 |
| Msa0231860 | Msa1102180 | -0.816744 | 4.723383e-52 | -8.615850e-47 |
| Msa0231860 | Msa1118140 | -0.820003 | 8.630182e-53 | -8.615850e-47 |
| Msa0231860 | Msa1122510 | -0.814692 | 1.353861e-51 | -8.615850e-47 |
| Msa0231860 | Msa1124440 | -0.810433 | 1.155374e-50 | -8.615850e-47 |
| Msa0231860 | Msa1126910 | -0.809232 | 2.094465e-50 | -8.615850e-47 |
| Msa0231860 | Msa1130070 | -0.801791 | 7.621973e-49 | -8.615850e-47 |
| Msa0231860 | Msa1138600 | -0.845844 | 3.151434e-59 | -8.615850e-47 |
| Msa0231860 | Msa1140010 | -0.825321 | 4.996964e-54 | -8.615850e-47 |
| Msa0231860 | Msa1152280 | -0.802171 | 6.367733e-49 | -8.615850e-47 |
| Msa0231860 | Msa1157160 | -0.806342 | 8.618028e-50 | -8.615850e-47 |
| Msa0231860 | Msa1159360 | -0.817402 | 3.359549e-52 | -8.615850e-47 |
| Msa0231860 | Msa1161160 | -0.824063 | 9.886367e-54 | -8.615850e-47 |
| Msa0231860 | Msa1164800 | 0.814240 | 1.703788e-51 | -8.615850e-47 |
| Msa0231860 | Msa1166180 | -0.830274 | 3.220075e-55 | -8.615850e-47 |
| Msa0231860 | Msa1166280 | -0.830476 | 2.874808e-55 | -8.615850e-47 |
| Msa0231860 | Msa1168130 | -0.800655 | 1.301754e-48 | -8.615850e-47 |
| Msa0231860 | Msa1175590 | -0.815616 | 8.439683e-52 | -8.615850e-47 |
| Msa0231860 | Msa1178970 | -0.825494 | 4.547615e-54 | -8.615850e-47 |
| Msa0231860 | Msa1186580 | -0.810469 | 1.135148e-50 | -8.615850e-47 |
| Msa0231860 | Msa1211390 | -0.827312 | 1.676798e-54 | -8.615850e-47 |
| Msa0231860 | Msa1214900 | -0.842340 | 2.745899e-58 | -8.615850e-47 |
| Msa0231860 | Msa1219780 | 0.832533 | 8.956454e-56 | -8.615850e-47 |
| Msa0231860 | Msa1220740 | -0.820360 | 7.147473e-53 | -8.615850e-47 |
| Msa0231860 | Msa1222030 | 0.850603 | 1.525934e-60 | -8.615850e-47 |
| Msa0231860 | Msa1226600 | -0.816238 | 6.131135e-52 | -8.615850e-47 |
| Msa0231860 | Msa1233770 | -0.807222 | 5.617022e-50 | -8.615850e-47 |
| Msa0231860 | Msa1235760 | -0.817264 | 3.609730e-52 | -8.615850e-47 |
| Msa0231860 | Msa1235770 | -0.810076 | 1.379831e-50 | -8.615850e-47 |
| Msa0231860 | Msa1237260 | -0.807579 | 4.717677e-50 | -8.615850e-47 |
| Msa0231860 | Msa1246420 | -0.816650 | 4.958504e-52 | -8.615850e-47 |
| Msa0231860 | Msa1266710 | 0.812388 | 4.348553e-51 | -8.615850e-47 |
| Msa0231860 | Msa1276080 | -0.821032 | 5.008014e-53 | -8.615850e-47 |
| Msa0231860 | Msa1282210 | -0.803960 | 2.715780e-49 | -8.615850e-47 |
| Msa0231860 | Msa1284390 | -0.819095 | 1.389962e-52 | -8.615850e-47 |
| Msa0231860 | Msa1287160 | -0.803415 | 3.524894e-49 | -8.615850e-47 |
| Msa0231860 | Msa1287340 | -0.808551 | 2.930472e-50 | -8.615850e-47 |
| Msa0231860 | Msa1309100 | -0.800739 | 1.251552e-48 | -8.615850e-47 |
| Msa0231860 | Msa1319440 | -0.800547 | 1.369119e-48 | -8.615850e-47 |
| Msa0231860 | Msa1325980 | -0.816558 | 5.199229e-52 | -8.615850e-47 |
| Msa0231860 | Msa1326000 | -0.806620 | 7.530977e-50 | -8.615850e-47 |
| Msa0231860 | Msa1334650 | -0.822128 | 2.795170e-53 | -8.615850e-47 |
| Msa0231860 | Msa1335720 | -0.801555 | 8.519456e-49 | -8.615850e-47 |
| Msa0231860 | Msa1335970 | 0.845907 | 3.030383e-59 | -8.615850e-47 |
| Msa0231860 | Msa1349360 | -0.818166 | 2.258843e-52 | -8.615850e-47 |
| Msa0231860 | Msa1355260 | -0.805998 | 1.018470e-49 | -8.615850e-47 |
| Msa0231860 | Msa1359620 | -0.808085 | 3.682059e-50 | -8.615850e-47 |
| Msa0231860 | Msa1370930 | 0.812862 | 3.423618e-51 | -8.615850e-47 |
| Msa0231860 | Msa1381130 | -0.845777 | 3.286562e-59 | -8.615850e-47 |
| Msa0231860 | Msa1387090 | -0.815884 | 7.352235e-52 | -8.615850e-47 |
| Msa0231860 | Msa1395580 | -0.802220 | 6.221253e-49 | -8.615850e-47 |
| Msa0231860 | Msa1395690 | 0.823823 | 1.125316e-53 | -8.615850e-47 |
| Msa0231860 | Msa1397110 | -0.801235 | 9.908183e-49 | -8.615850e-47 |
| Msa0231860 | Msa1397540 | -0.812579 | 3.948187e-51 | -8.615850e-47 |
| Msa0231860 | Msa1403700 | -0.805082 | 1.585157e-49 | -8.615850e-47 |
| Msa0231860 | Msa1405770 | -0.840559 | 8.084999e-58 | -8.615850e-47 |
| Msa0231860 | Msa1406230 | -0.834099 | 3.646128e-56 | -8.615850e-47 |
| Msa0231860 | Msa1407210 | 0.827223 | 1.761847e-54 | -8.615850e-47 |
| Msa0231860 | Msa1408190 | -0.826655 | 2.407598e-54 | -8.615850e-47 |
| Msa0231860 | Msa1410170 | -0.825235 | 5.235004e-54 | -8.615850e-47 |
| Msa0231860 | Msa1412520 | -0.800741 | 1.250389e-48 | -8.615850e-47 |
| Msa0231860 | Msa1414330 | 0.993791 | 3.002804e-202 | -8.615850e-47 |
| Msa0231860 | Msa1418200 | -0.810138 | 1.337777e-50 | -8.615850e-47 |
| Msa0231860 | Msa1428440 | -0.811026 | 8.599448e-51 | -8.615850e-47 |
| Msa0231860 | Msa1440180 | -0.820467 | 6.754986e-53 | -8.615850e-47 |
| Msa0231860 | Msa1447560 | -0.821209 | 4.560419e-53 | -8.615850e-47 |
| Msa0231860 | Msa1448990 | -0.825812 | 3.822934e-54 | -8.615850e-47 |
| Msa0231860 | Msa1449600 | -0.830471 | 2.882976e-55 | -8.615850e-47 |
| Msa0231860 | Msa1449740 | -0.819614 | 1.058682e-52 | -8.615850e-47 |
| Msa0231860 | Msa1450420 | -0.824600 | 7.394698e-54 | -8.615850e-47 |
| Msa0231860 | Msa1456830 | -0.803003 | 4.288439e-49 | -8.615850e-47 |
| Msa0231860 | Msa1458920 | -0.835325 | 1.792289e-56 | -8.615850e-47 |
| Msa0231860 | Msa1460310 | 0.806273 | 8.912280e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231860 | MtrunA17_Chr2g0278591 | 100.000 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 0.0 | 780 |
| Msa0231860 | MtrunA17_Chr3g0129641 | 94.695 | 377 | 20 | 0 | 1 | 377 | 1 | 377 | 0.0 | 754 |
| Msa0231860 | MtrunA17_Chr6g0448881 | 93.899 | 377 | 23 | 0 | 1 | 377 | 1 | 377 | 0.0 | 754 |
| Msa0231860 | MtrunA17_Chr2g0328091 | 93.634 | 377 | 24 | 0 | 1 | 377 | 1 | 377 | 0.0 | 752 |
| Msa0231860 | MtrunA17_Chr7g0223901 | 93.899 | 377 | 23 | 0 | 1 | 377 | 1 | 377 | 0.0 | 751 |
| Msa0231860 | MtrunA17_Chr1g0175391 | 93.899 | 377 | 23 | 0 | 1 | 377 | 1 | 377 | 0.0 | 750 |
| Msa0231860 | MtrunA17_Chr7g0258721 | 92.838 | 377 | 27 | 0 | 1 | 377 | 1 | 377 | 0.0 | 744 |
| Msa0231860 | MtrunA17_Chr7g0224401 | 43.536 | 379 | 200 | 3 | 10 | 374 | 7 | 385 | 1.38e-121 | 357 |
| Msa0231860 | MtrunA17_Chr5g0427591 | 36.323 | 446 | 211 | 11 | 1 | 376 | 1 | 443 | 9.52e-91 | 280 |
| Msa0231860 | MtrunA17_Chr8g0361001 | 36.323 | 446 | 211 | 11 | 1 | 376 | 1 | 443 | 1.76e-90 | 279 |
| Msa0231860 | MtrunA17_Chr8g0381261 | 34.550 | 411 | 219 | 8 | 10 | 372 | 10 | 418 | 1.18e-74 | 238 |
| Msa0231860 | MtrunA17_Chr3g0089031 | 37.467 | 379 | 213 | 9 | 7 | 377 | 1 | 363 | 1.01e-70 | 225 |
| Msa0231860 | MtrunA17_Chr2g0305361 | 28.111 | 434 | 246 | 7 | 8 | 377 | 6 | 437 | 5.61e-59 | 197 |
| Msa0231860 | MtrunA17_Chr3g0080021 | 31.338 | 284 | 171 | 9 | 91 | 358 | 179 | 454 | 5.06e-40 | 147 |
| Msa0231860 | MtrunA17_Chr8g0369101 | 32.082 | 293 | 172 | 10 | 91 | 366 | 187 | 469 | 1.92e-37 | 140 |
| Msa0231860 | MtrunA17_Chr3g0111971 | 28.968 | 252 | 160 | 7 | 9 | 245 | 21 | 268 | 5.39e-23 | 100 |
| Msa0231860 | MtrunA17_Chr3g0111971 | 34.426 | 122 | 77 | 2 | 250 | 368 | 586 | 707 | 6.37e-16 | 79.3 |
| Msa0231860 | MtrunA17_Chr8g0336061 | 40.217 | 92 | 42 | 1 | 241 | 319 | 12 | 103 | 1.84e-18 | 80.1 |
| Msa0231860 | MtrunA17_Chr8g0336071 | 37.895 | 95 | 59 | 0 | 105 | 199 | 1 | 95 | 1.39e-17 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231860 | AT3G12110.1 | 94.164 | 377 | 22 | 0 | 1 | 377 | 1 | 377 | 0.0 | 751 |
| Msa0231860 | AT5G09810.1 | 94.430 | 377 | 21 | 0 | 1 | 377 | 1 | 377 | 0.0 | 749 |
| Msa0231860 | AT3G53750.1 | 92.042 | 377 | 30 | 0 | 1 | 377 | 1 | 377 | 0.0 | 741 |
| Msa0231860 | AT3G53750.2 | 92.042 | 377 | 30 | 0 | 1 | 377 | 1 | 377 | 0.0 | 741 |
| Msa0231860 | AT2G37620.1 | 92.042 | 377 | 30 | 0 | 1 | 377 | 1 | 377 | 0.0 | 741 |
| Msa0231860 | AT2G37620.3 | 92.042 | 377 | 30 | 0 | 1 | 377 | 1 | 377 | 0.0 | 741 |
| Msa0231860 | AT2G37620.2 | 92.042 | 377 | 30 | 0 | 1 | 377 | 1 | 377 | 0.0 | 741 |
| Msa0231860 | AT2G37620.4 | 92.042 | 377 | 30 | 0 | 1 | 377 | 1 | 377 | 0.0 | 741 |
| Msa0231860 | AT5G59370.2 | 92.042 | 377 | 30 | 0 | 1 | 377 | 1 | 377 | 0.0 | 738 |
| Msa0231860 | AT5G59370.1 | 92.042 | 377 | 30 | 0 | 1 | 377 | 1 | 377 | 0.0 | 738 |
| Msa0231860 | AT3G46520.2 | 91.777 | 377 | 31 | 0 | 1 | 377 | 1 | 377 | 0.0 | 736 |
| Msa0231860 | AT3G46520.1 | 91.777 | 377 | 31 | 0 | 1 | 377 | 1 | 377 | 0.0 | 736 |
| Msa0231860 | AT1G49240.1 | 89.920 | 377 | 38 | 0 | 1 | 377 | 1 | 377 | 0.0 | 731 |
| Msa0231860 | AT3G18780.2 | 89.655 | 377 | 39 | 0 | 1 | 377 | 1 | 377 | 0.0 | 729 |
| Msa0231860 | AT3G18780.3 | 89.655 | 377 | 39 | 0 | 1 | 377 | 1 | 377 | 0.0 | 729 |
| Msa0231860 | AT3G18780.1 | 88.920 | 361 | 40 | 0 | 1 | 361 | 1 | 361 | 0.0 | 689 |
| Msa0231860 | AT2G42100.1 | 83.696 | 368 | 60 | 0 | 10 | 377 | 11 | 378 | 0.0 | 673 |
| Msa0231860 | AT2G42090.1 | 70.270 | 370 | 105 | 1 | 7 | 376 | 1 | 365 | 0.0 | 568 |
| Msa0231860 | AT2G42170.1 | 77.711 | 332 | 71 | 1 | 46 | 377 | 1 | 329 | 0.0 | 560 |
| Msa0231860 | AT2G42170.3 | 77.711 | 332 | 71 | 1 | 46 | 377 | 1 | 329 | 0.0 | 560 |
| Msa0231860 | AT2G42170.4 | 77.564 | 312 | 67 | 1 | 46 | 357 | 1 | 309 | 0.0 | 522 |
| Msa0231860 | AT2G42170.2 | 77.564 | 312 | 67 | 1 | 46 | 357 | 1 | 309 | 0.0 | 522 |
| Msa0231860 | AT2G42170.5 | 77.434 | 226 | 48 | 1 | 152 | 377 | 9 | 231 | 2.33e-131 | 376 |
| Msa0231860 | AT3G27000.1 | 43.536 | 379 | 200 | 3 | 10 | 374 | 7 | 385 | 2.77e-122 | 358 |
| Msa0231860 | AT1G18450.1 | 36.795 | 443 | 210 | 8 | 1 | 376 | 1 | 440 | 3.30e-94 | 289 |
| Msa0231860 | AT1G13180.1 | 34.383 | 413 | 219 | 9 | 10 | 373 | 9 | 418 | 4.91e-75 | 239 |
| Msa0231860 | AT3G60830.1 | 37.731 | 379 | 212 | 9 | 7 | 377 | 1 | 363 | 6.86e-69 | 221 |
| Msa0231860 | AT3G33520.1 | 30.641 | 421 | 234 | 7 | 10 | 377 | 5 | 420 | 6.32e-61 | 202 |
| Msa0231860 | AT5G56180.3 | 31.271 | 291 | 174 | 9 | 91 | 364 | 50 | 331 | 9.44e-37 | 136 |
| Msa0231860 | AT5G56180.1 | 31.271 | 291 | 174 | 9 | 91 | 364 | 182 | 463 | 1.06e-35 | 136 |
| Msa0231860 | AT3G12380.2 | 29.183 | 257 | 159 | 6 | 9 | 245 | 21 | 274 | 2.52e-26 | 111 |
| Msa0231860 | AT3G12380.2 | 35.246 | 122 | 76 | 1 | 250 | 368 | 595 | 716 | 2.83e-16 | 80.9 |
| Msa0231860 | AT3G12380.1 | 29.020 | 255 | 156 | 6 | 9 | 245 | 21 | 268 | 1.27e-25 | 109 |
| Msa0231860 | AT3G12380.1 | 35.246 | 122 | 76 | 1 | 250 | 368 | 589 | 710 | 3.06e-16 | 80.9 |
| Msa0231860 | AT1G73910.1 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 5.36e-24 | 97.1 |
| Msa0231860 | AT1G73910.2 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 5.36e-24 | 97.1 |
| Msa0231860 | AT5G56180.2 | 32.178 | 202 | 114 | 7 | 91 | 281 | 182 | 371 | 5.68e-20 | 90.9 |
| Msa0231860 | AT1G73910.3 | 29.268 | 123 | 71 | 2 | 1 | 107 | 1 | 123 | 1.14e-12 | 66.2 |
Find 150 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTATATGTTTCTTCTTT+AGG | 0.181484 | 2_2:-4189510 | Msa0231860:three_prime_UTR |
| CTCTTCCAGCCTTCTCTAAT+TGG | 0.203357 | 2_2:-4190118 | Msa0231860:CDS |
| TTCATGCTGGTCATGAATTT+AGG | 0.257723 | 2_2:-4189398 | Msa0231860:three_prime_UTR |
| TGAAAGTCTCAAACATAATC+TGG | 0.264920 | 2_2:+4191028 | None:intergenic |
| ATTCTTCGTTTGGATCTTGC+TGG | 0.283771 | 2_2:-4190376 | Msa0231860:CDS |
| AGAAGCACAGGGTGTTCTTC+TGG | 0.289026 | 2_2:+4191096 | None:intergenic |
| ACGAGGTCGCCCAATGATAC+TGG | 0.294802 | 2_2:+4191293 | None:intergenic |
| TCCCCATGCAATTCTTCGTT+TGG | 0.297491 | 2_2:-4190386 | Msa0231860:CDS |
| GTAGGTATTGTGCTTGATTC+TGG | 0.298638 | 2_2:-4190454 | Msa0231860:intron |
| CGAGGAGTGGGAAGTGTTAC+AGG | 0.312663 | 2_2:+4192079 | None:intergenic |
| AGCATGGTATAGTTAGTAAC+TGG | 0.325644 | 2_2:-4191173 | Msa0231860:CDS |
| GGAGGTTCTACTATGTTTCC+TGG | 0.336897 | 2_2:-4189998 | Msa0231860:CDS |
| AACCAAACTTGACTGAAATA+TGG | 0.338167 | 2_2:+4189605 | None:intergenic |
| AAGAGCATACCCTTCATATA+TGG | 0.341233 | 2_2:+4190408 | None:intergenic |
| CCTCATACAAATATAGATTA+AGG | 0.345616 | 2_2:+4189233 | None:intergenic |
| TTGAAACGCACCTTGTTAGA+AGG | 0.349336 | 2_2:+4192012 | None:intergenic |
| CCATTTCTTGTTCAAAATCA+AGG | 0.349898 | 2_2:+4190239 | None:intergenic |
| AAGGGTGAATATGATGAATC+TGG | 0.351116 | 2_2:-4189705 | Msa0231860:CDS |
| GAATTTAGGTGCCTCTAGTT+AGG | 0.351952 | 2_2:-4189384 | Msa0231860:three_prime_UTR |
| TGCCATATTTCAGTCAAGTT+TGG | 0.354500 | 2_2:-4189607 | Msa0231860:three_prime_UTR |
| GTGATGAAGCTCAGTCAAAA+AGG | 0.356008 | 2_2:-4191224 | Msa0231860:CDS |
| ACCCAACTCAGAAGCACTTT+CGG | 0.364555 | 2_2:+4189667 | None:intergenic |
| TATGAGGTGATGGGCCTATA+GGG | 0.370363 | 2_2:-4189217 | Msa0231860:three_prime_UTR |
| ATGACTCAAAATTCCCTGTC+TGG | 0.371267 | 2_2:+4189330 | None:intergenic |
| GCCGTGTTCCCCAGTATCAT+TGG | 0.371777 | 2_2:-4191303 | Msa0231860:CDS |
| CTGGATTGGTGGGTCTATCT+TGG | 0.374688 | 2_2:-4189882 | Msa0231860:CDS |
| GAAGGCTGGAAGAGTACTTC+GGG | 0.376616 | 2_2:+4190127 | None:intergenic |
| ATGTTTCTTCTTTAGGTCCT+TGG | 0.378100 | 2_2:-4189503 | Msa0231860:three_prime_UTR |
| TGAACTTTGTAGGTTCTGTT+TGG | 0.381657 | 2_2:-4189443 | Msa0231860:three_prime_UTR |
| GTATGAGGTGATGGGCCTAT+AGG | 0.384937 | 2_2:-4189218 | Msa0231860:three_prime_UTR |
| CTAACTATACCATGCTCTAT+AGG | 0.385023 | 2_2:+4191180 | None:intergenic |
| AGTTAGTAACTGGGACGATA+TGG | 0.387331 | 2_2:-4191163 | Msa0231860:CDS |
| CTCATACGGTCAGCAATTCC+AGG | 0.397451 | 2_2:+4189980 | None:intergenic |
| TGAAGTGTGATGTTGATATT+AGG | 0.398134 | 2_2:-4190051 | Msa0231860:CDS |
| ACCGAAAGTGCTTCTGAGTT+GGG | 0.400428 | 2_2:-4189668 | Msa0231860:exon |
| TTCTTCGTTTGGATCTTGCT+GGG | 0.403209 | 2_2:-4190375 | Msa0231860:CDS |
| CCTTAATCTATATTTGTATG+AGG | 0.421114 | 2_2:-4189233 | Msa0231860:three_prime_UTR |
| AGAATTTGATCACAACTCAT+TGG | 0.428205 | 2_2:+4189638 | None:intergenic |
| GATATTAGGAAGGATCTATA+TGG | 0.429892 | 2_2:-4190037 | Msa0231860:CDS |
| GCAAATCAAACAAACCCTAT+AGG | 0.429939 | 2_2:+4189203 | None:intergenic |
| GGGACGATATGGAAAAGATT+TGG | 0.432591 | 2_2:-4191152 | Msa0231860:CDS |
| TCTATATTTGTATGAGGTGA+TGG | 0.435127 | 2_2:-4189227 | Msa0231860:three_prime_UTR |
| TATGGAAATATTGTGCTTAG+TGG | 0.440342 | 2_2:-4190019 | Msa0231860:CDS |
| TTGCAGGTGATGATGCTCCT+AGG | 0.440390 | 2_2:-4191326 | Msa0231860:CDS |
| GTCATACCGGTGTAATGGTT+GGG | 0.440783 | 2_2:-4191272 | Msa0231860:CDS |
| CACCGAAAGTGCTTCTGAGT+TGG | 0.441198 | 2_2:-4189669 | Msa0231860:exon |
| CTTGTCGTTGACAATGGAAC+TGG | 0.444949 | 2_2:-4191478 | Msa0231860:CDS |
| ATTGTTATGACCTGTCCATC+AGG | 0.450057 | 2_2:+4190172 | None:intergenic |
| TGGATTGCAACATACATTGC+AGG | 0.450250 | 2_2:+4191000 | None:intergenic |
| CTGAGAGGAAGTACAGTGTC+TGG | 0.452337 | 2_2:-4189901 | Msa0231860:CDS |
| GGAGCCTCGGTAAGAAGCAC+AGG | 0.455052 | 2_2:+4191084 | None:intergenic |
| CATATCTATTTCTCCCAGAC+AGG | 0.455196 | 2_2:-4189344 | Msa0231860:three_prime_UTR |
| TGCAATGTATGTTGCAATCC+AGG | 0.457549 | 2_2:-4190998 | Msa0231860:CDS |
| ATCACTCAGTACCTTTCAAC+AGG | 0.460639 | 2_2:-4189858 | Msa0231860:intron |
| TGACTTATTATTTGATGCTG+TGG | 0.465608 | 2_2:-4189583 | Msa0231860:three_prime_UTR |
| GATGGACAGGTCATAACAAT+AGG | 0.466277 | 2_2:-4190169 | Msa0231860:CDS |
| CTACGAGTTGCCTGATGGAC+AGG | 0.466607 | 2_2:-4190182 | Msa0231860:CDS |
| CCGTGTTCCCCAGTATCATT+GGG | 0.466998 | 2_2:-4191302 | Msa0231860:CDS |
| GGGATGGTATTGAACTTTGT+AGG | 0.467493 | 2_2:-4189453 | Msa0231860:three_prime_UTR |
| CCAGCCTTCTCTAATTGGTA+TGG | 0.471456 | 2_2:-4190113 | Msa0231860:CDS |
| TACCGGTGTAATGGTTGGGA+TGG | 0.474226 | 2_2:-4191268 | Msa0231860:CDS |
| GACTTATTATTTGATGCTGT+GGG | 0.478235 | 2_2:-4189582 | Msa0231860:three_prime_UTR |
| CACTGATTTCCTTGCTCATA+CGG | 0.481431 | 2_2:+4189966 | None:intergenic |
| CACTTTCGGTGAACAATAGC+TGG | 0.483033 | 2_2:+4189681 | None:intergenic |
| CTATTGGCTTTAGGATTGAG+TGG | 0.488468 | 2_2:+4191063 | None:intergenic |
| CGAGGTCGCCCAATGATACT+GGG | 0.492401 | 2_2:+4191294 | None:intergenic |
| CTCCACGGCAGAGCTGCTCT+TGG | 0.494017 | 2_2:+4190210 | None:intergenic |
| AAGTACAGTGTCTGGATTGG+TGG | 0.495328 | 2_2:-4189893 | Msa0231860:CDS |
| TGGAGAAGCGAGCGAGGAGT+GGG | 0.495732 | 2_2:+4192067 | None:intergenic |
| CATTTCTTGTTCAAAATCAA+GGG | 0.500283 | 2_2:+4190240 | None:intergenic |
| TGACTCAAAATTCCCTGTCT+GGG | 0.503869 | 2_2:+4189331 | None:intergenic |
| GCGTGATTTAACAGAGTACT+TGG | 0.505684 | 2_2:-4190353 | Msa0231860:CDS |
| AGAGCATACCCTTCATATAT+GGG | 0.507300 | 2_2:+4190409 | None:intergenic |
| CAAACCTGTGGTACGTCCAC+TGG | 0.513599 | 2_2:+4190957 | None:intergenic |
| CAGACACTGTACTTCCTCTC+AGG | 0.514199 | 2_2:+4189902 | None:intergenic |
| ACCTCGTCATACCGGTGTAA+TGG | 0.515976 | 2_2:-4191277 | Msa0231860:CDS |
| CACACAGTGCCCATATATGA+AGG | 0.517963 | 2_2:-4190418 | Msa0231860:CDS |
| CGTCATACCGGTGTAATGGT+TGG | 0.521275 | 2_2:-4191273 | Msa0231860:CDS |
| CTTCAGTACCTCAGCTGAGA+AGG | 0.523675 | 2_2:-4190302 | Msa0231860:CDS |
| AGATTCATCATATTCACCCT+TGG | 0.524089 | 2_2:+4189707 | None:intergenic |
| CTAATTGGTATGGAAGCTAC+TGG | 0.524153 | 2_2:-4190103 | Msa0231860:CDS |
| AGGTGCCTCTAGTTAGGAGG+AGG | 0.526210 | 2_2:-4189378 | Msa0231860:three_prime_UTR |
| CAAAGAGAAACTAGCATATG+TGG | 0.529444 | 2_2:-4190263 | Msa0231860:CDS |
| CCCAATGATACTGGGGAACA+CGG | 0.529959 | 2_2:+4191302 | None:intergenic |
| CAACCTCTTGTCGTTGACAA+TGG | 0.532453 | 2_2:-4191484 | Msa0231860:CDS |
| GAAAGTCTCAAACATAATCT+GGG | 0.537293 | 2_2:+4191029 | None:intergenic |
| ATCCAAACGAAGAATTGCAT+GGG | 0.537295 | 2_2:+4190384 | None:intergenic |
| TGCAGGTGATGATGCTCCTA+GGG | 0.537820 | 2_2:-4191325 | Msa0231860:CDS |
| ATTGTGCTTGATTCTGGTGA+TGG | 0.539615 | 2_2:-4190448 | Msa0231860:CDS |
| CTTCTCAGCTGAGGTACTGA+AGG | 0.541718 | 2_2:+4190303 | None:intergenic |
| AATATATCTAGTTTAACGAA+TGG | 0.544008 | 2_2:-4189548 | Msa0231860:three_prime_UTR |
| CCATACCAATTAGAGAAGGC+TGG | 0.544939 | 2_2:+4190113 | None:intergenic |
| TTTAGGATTGAGTGGAGCCT+CGG | 0.559877 | 2_2:+4191071 | None:intergenic |
| AGAAGGCTGGAAGAGTACTT+CGG | 0.560097 | 2_2:+4190126 | None:intergenic |
| TATGCCAGTGGACGTACCAC+AGG | 0.563139 | 2_2:-4190961 | Msa0231860:intron |
| GGTCAGAAGGATGCTTATGT+AGG | 0.563553 | 2_2:-4191246 | Msa0231860:CDS |
| AAGAGCTACGAGTTGCCTGA+TGG | 0.564122 | 2_2:-4190187 | Msa0231860:CDS |
| AATGGTTGGGATGGGTCAGA+AGG | 0.565362 | 2_2:-4191259 | Msa0231860:CDS |
| ATACTGGGGAACACGGCCCT+AGG | 0.566767 | 2_2:+4191309 | None:intergenic |
| AGGGTGAATATGATGAATCT+GGG | 0.568343 | 2_2:-4189704 | Msa0231860:CDS |
| CTATATTTGTATGAGGTGAT+GGG | 0.569837 | 2_2:-4189226 | Msa0231860:three_prime_UTR |
| GGAAATATTGTGCTTAGTGG+AGG | 0.572013 | 2_2:-4190016 | Msa0231860:CDS |
| ATCAACATCACACTTCATGA+TGG | 0.572991 | 2_2:+4190057 | None:intergenic |
| CATACAGAGATAAGACGGCC+TGG | 0.574959 | 2_2:+4190980 | None:intergenic |
| GATCCAAACGAAGAATTGCA+TGG | 0.574973 | 2_2:+4190383 | None:intergenic |
| CTAGTTTCTCTTTGACATCA+CGG | 0.575209 | 2_2:+4190272 | None:intergenic |
| ATTGGGCGACCTCGTCATAC+CGG | 0.575640 | 2_2:-4191285 | Msa0231860:CDS |
| TACCAAGAGCAGCTCTGCCG+TGG | 0.577097 | 2_2:-4190212 | Msa0231860:CDS |
| GTGGAGAAGCGAGCGAGGAG+TGG | 0.580963 | 2_2:+4192066 | None:intergenic |
| GGAAGAGTACTTCGGGGCAA+CGG | 0.581700 | 2_2:+4190134 | None:intergenic |
| AGTACAGTGTCTGGATTGGT+GGG | 0.583080 | 2_2:-4189892 | Msa0231860:CDS |
| ACCGGTGTAATGGTTGGGAT+GGG | 0.584646 | 2_2:-4191267 | Msa0231860:CDS |
| TCCAAGTAGCATGAAAATCA+AGG | 0.588368 | 2_2:-4189936 | Msa0231860:CDS |
| GTTCCATTGTCAACGACAAG+AGG | 0.589221 | 2_2:+4191481 | None:intergenic |
| GTCTTATCTCTGTATGCCAG+TGG | 0.591211 | 2_2:-4190973 | Msa0231860:CDS |
| GAACGGTGGAGAAGCGAGCG+AGG | 0.591368 | 2_2:+4192061 | None:intergenic |
| TATGCAGATGTGGATCTCCA+AGG | 0.595738 | 2_2:-4189724 | Msa0231860:intron |
| TTTAGGTGCCTCTAGTTAGG+AGG | 0.597583 | 2_2:-4189381 | Msa0231860:three_prime_UTR |
| GTGAAAATTCTCACTGAGAG+AGG | 0.601733 | 2_2:-4190331 | Msa0231860:CDS |
| CAATGGAACTGGAATGGTCA+AGG | 0.605491 | 2_2:-4191467 | Msa0231860:intron |
| TTGAAGTATCCTATAGAGCA+TGG | 0.607917 | 2_2:-4191189 | Msa0231860:CDS |
| TTCGGGGCAACGGAATCTCT+CGG | 0.608877 | 2_2:+4190144 | None:intergenic |
| AAAGTGTGTCAGAGAGAACA+AGG | 0.609943 | 2_2:+4192102 | None:intergenic |
| GACAATTTCCTTCTCAGCTG+AGG | 0.611009 | 2_2:+4190294 | None:intergenic |
| AGGAAGTACAGTGTCTGGAT+TGG | 0.611355 | 2_2:-4189896 | Msa0231860:CDS |
| ATGCAGATGTGGATCTCCAA+GGG | 0.617585 | 2_2:-4189723 | Msa0231860:intron |
| GTGAGTTCATACCTGTTGAA+AGG | 0.619084 | 2_2:+4189847 | None:intergenic |
| AATTGCTGACCGTATGAGCA+AGG | 0.626661 | 2_2:-4189975 | Msa0231860:CDS |
| ATATCTATTTCTCCCAGACA+GGG | 0.631530 | 2_2:-4189343 | Msa0231860:three_prime_UTR |
| GCATGGTATAGTTAGTAACT+GGG | 0.634959 | 2_2:-4191172 | Msa0231860:CDS |
| GCTTCCATACCAATTAGAGA+AGG | 0.635424 | 2_2:+4190109 | None:intergenic |
| GGTGCCTCTAGTTAGGAGGA+GGG | 0.639087 | 2_2:-4189377 | Msa0231860:three_prime_UTR |
| CGTTGACAATGGAACTGGAA+TGG | 0.640256 | 2_2:-4191473 | Msa0231860:CDS |
| GTGTGATGTTGATATTAGGA+AGG | 0.640348 | 2_2:-4190047 | Msa0231860:CDS |
| ACCCATCCCAACCATTACAC+CGG | 0.641755 | 2_2:+4191266 | None:intergenic |
| CTCACCCTCCTCCTAACTAG+AGG | 0.644958 | 2_2:+4189373 | None:intergenic |
| ACCATTACACCGGTATGACG+AGG | 0.651416 | 2_2:+4191276 | None:intergenic |
| ACTGGCATACAGAGATAAGA+CGG | 0.654330 | 2_2:+4190975 | None:intergenic |
| AGGTGGTTGCACCTCCTGAG+AGG | 0.655646 | 2_2:-4189916 | Msa0231860:CDS |
| CTATAGGATACTTCAATGTG+AGG | 0.657321 | 2_2:+4191196 | None:intergenic |
| ACACAGTGCCCATATATGAA+GGG | 0.658479 | 2_2:-4190417 | Msa0231860:CDS |
| AGGTTTATATATGAAGAGTG+AGG | 0.668561 | 2_2:+4192122 | None:intergenic |
| ACACTGTACTTCCTCTCAGG+AGG | 0.673323 | 2_2:+4189905 | None:intergenic |
| ACACCCTGTGCTTCTTACCG+AGG | 0.679352 | 2_2:-4191088 | Msa0231860:CDS |
| AAGGCTGGAAGAGTACTTCG+GGG | 0.692122 | 2_2:+4190128 | None:intergenic |
| TCCAAACGAAGAATTGCATG+GGG | 0.695056 | 2_2:+4190385 | None:intergenic |
| GAGCCTCGGTAAGAAGCACA+GGG | 0.711665 | 2_2:+4191085 | None:intergenic |
| CAACTCGTAGCTCTTCTCCA+CGG | 0.712406 | 2_2:+4190195 | None:intergenic |
| GAGGTCGCCCAATGATACTG+GGG | 0.722255 | 2_2:+4191295 | None:intergenic |
| AAGTAGCATGAAAATCAAGG+TGG | 0.729568 | 2_2:-4189933 | Msa0231860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATTTTATAATGATTTCTT+AGG | - | chr2_2:4190716-4190735 | Msa0231860:intron | 15.0% |
| !! | TTGGAAAAGAAAAAAAAAAT+TGG | + | chr2_2:4191438-4191457 | None:intergenic | 15.0% |
| !!! | ATATTTATTTTATGCTTAGT+TGG | - | chr2_2:4191941-4191960 | Msa0231860:intron | 15.0% |
| !! | TTTCAACAAAATTAACAGAT+CGG | + | chr2_2:4189574-4189593 | None:intergenic | 20.0% |
| !! | ATATATAATTTCGTGTTTGA+AGG | - | chr2_2:4189636-4189655 | Msa0231860:three_prime_UTR | 20.0% |
| !! | ACAAACAATTCTATATGTAT+TGG | - | chr2_2:4190620-4190639 | Msa0231860:intron | 20.0% |
| !!! | AATATATCTAGTTTAACGAA+TGG | - | chr2_2:4191693-4191712 | Msa0231860:intron | 20.0% |
| ! | AGAATCAAAAAATCAAATCC+AGG | + | chr2_2:4189446-4189465 | None:intergenic | 25.0% |
| ! | TTGAAGGAATTATGAAATCA+CGG | - | chr2_2:4189652-4189671 | Msa0231860:three_prime_UTR | 25.0% |
| ! | ATGTACATGTCTTTAAACTT+CGG | - | chr2_2:4190445-4190464 | Msa0231860:CDS | 25.0% |
| ! | CAAACTGCATATAAAATTTC+AGG | + | chr2_2:4190485-4190504 | None:intergenic | 25.0% |
| !!! | TGTACATTTGTTATTATGCA+AGG | + | chr2_2:4190680-4190699 | None:intergenic | 25.0% |
| ! | TGCATAATAACAAATGTACA+AGG | - | chr2_2:4190680-4190699 | Msa0231860:intron | 25.0% |
| ! | CATTTCTTGTTCAAAATCAA+GGG | + | chr2_2:4191004-4191023 | None:intergenic | 25.0% |
| !! | TTCTTTTCCAATTGTCATAA+TGG | - | chr2_2:4191447-4191466 | Msa0231860:intron | 25.0% |
| ! | ATGCTATATGTTTCTTCTTT+AGG | - | chr2_2:4191731-4191750 | Msa0231860:intron | 25.0% |
| !!! | CTTTTATTTGTTTTTCATGC+TGG | - | chr2_2:4191830-4191849 | Msa0231860:intron | 25.0% |
| ! | CCTCATACAAATATAGATTA+AGG | + | chr2_2:4192011-4192030 | None:intergenic | 25.0% |
| ! | CCTTAATCTATATTTGTATG+AGG | - | chr2_2:4192008-4192027 | Msa0231860:intron | 25.0% |
| AGGTTTATATATGAAGAGTG+AGG | + | chr2_2:4189122-4189141 | None:intergenic | 30.0% | |
| !!! | CGCTTTTTTAATCGTTTACT+TGG | - | chr2_2:4189269-4189288 | Msa0231860:three_prime_UTR | 30.0% |
| !!! | TACTTGGTCTTTTTTGTTTC+TGG | - | chr2_2:4189285-4189304 | Msa0231860:three_prime_UTR | 30.0% |
| !!! | TATGCATAGGTTTTGAAAGA+TGG | - | chr2_2:4189717-4189736 | Msa0231860:CDS | 30.0% |
| !!! | ATCTTTTCTCTATTGGCTTT+AGG | + | chr2_2:4190190-4190209 | None:intergenic | 30.0% |
| GAAAGTCTCAAACATAATCT+GGG | + | chr2_2:4190215-4190234 | None:intergenic | 30.0% | |
| TGAAAGTCTCAAACATAATC+TGG | + | chr2_2:4190216-4190235 | None:intergenic | 30.0% | |
| TGTGATCATGTATCTTCAAT+TGG | - | chr2_2:4190337-4190356 | Msa0231860:CDS | 30.0% | |
| TTGTACATGTCTTGAAACTT+TGG | - | chr2_2:4190528-4190547 | Msa0231860:intron | 30.0% | |
| GCAACTTGAAATTCTATATG+CGG | - | chr2_2:4190561-4190580 | Msa0231860:intron | 30.0% | |
| TGTACAAGGATGATAATACA+TGG | - | chr2_2:4190694-4190713 | Msa0231860:intron | 30.0% | |
| ACAAACAATTCAAACCATGA+AGG | + | chr2_2:4190762-4190781 | None:intergenic | 30.0% | |
| TTGAATTGTTTGTTCTACGT+AGG | - | chr2_2:4190769-4190788 | Msa0231860:intron | 30.0% | |
| CCATTTCTTGTTCAAAATCA+AGG | + | chr2_2:4191005-4191024 | None:intergenic | 30.0% | |
| ! | CCTTGATTTTGAACAAGAAA+TGG | - | chr2_2:4191002-4191021 | Msa0231860:CDS | 30.0% |
| TGAAGTGTGATGTTGATATT+AGG | - | chr2_2:4191190-4191209 | Msa0231860:CDS | 30.0% | |
| GATATTAGGAAGGATCTATA+TGG | - | chr2_2:4191204-4191223 | Msa0231860:CDS | 30.0% | |
| TATGGAAATATTGTGCTTAG+TGG | - | chr2_2:4191222-4191241 | Msa0231860:CDS | 30.0% | |
| ! | TTCCAATTGTCATAATGGAA+TGG | - | chr2_2:4191452-4191471 | Msa0231860:intron | 30.0% |
| ! | TAATGGAATGGACCATTTTA+TGG | - | chr2_2:4191464-4191483 | Msa0231860:intron | 30.0% |
| ! | AATGGAATGGACCATTTTAT+GGG | - | chr2_2:4191465-4191484 | Msa0231860:intron | 30.0% |
| TGTTTAATTCTATGCAGATG+TGG | - | chr2_2:4191507-4191526 | Msa0231860:CDS | 30.0% | |
| AGAATTTGATCACAACTCAT+TGG | + | chr2_2:4191606-4191625 | None:intergenic | 30.0% | |
| AACCAAACTTGACTGAAATA+TGG | + | chr2_2:4191639-4191658 | None:intergenic | 30.0% | |
| TGACTTATTATTTGATGCTG+TGG | - | chr2_2:4191658-4191677 | Msa0231860:intron | 30.0% | |
| GACTTATTATTTGATGCTGT+GGG | - | chr2_2:4191659-4191678 | Msa0231860:intron | 30.0% | |
| CCAATTGCATAAAAATAGTC+TGG | + | chr2_2:4191767-4191786 | None:intergenic | 30.0% | |
| !!! | CCAGACTATTTTTATGCAAT+TGG | - | chr2_2:4191764-4191783 | Msa0231860:intron | 30.0% |
| !!! | GACTATTTTTATGCAATTGG+CGG | - | chr2_2:4191767-4191786 | Msa0231860:intron | 30.0% |
| !!! | ACTATTTTTATGCAATTGGC+GGG | - | chr2_2:4191768-4191787 | Msa0231860:intron | 30.0% |
| !!! | TTTATGCTTAGTTGGTTTTC+AGG | - | chr2_2:4191949-4191968 | Msa0231860:intron | 30.0% |
| TCTATATTTGTATGAGGTGA+TGG | - | chr2_2:4192014-4192033 | Msa0231860:intron | 30.0% | |
| CTATATTTGTATGAGGTGAT+GGG | - | chr2_2:4192015-4192034 | Msa0231860:intron | 30.0% | |
| !! | TGTTAGAAGGAAAAAGCGTT+AGG | + | chr2_2:4189219-4189238 | None:intergenic | 35.0% |
| !!! | AACGCTTTTTCCTTCTAACA+AGG | - | chr2_2:4189219-4189238 | Msa0231860:three_prime_UTR | 35.0% |
| !!! | GGTCTTTTTTGTTTCTGGAT+CGG | - | chr2_2:4189290-4189309 | Msa0231860:three_prime_UTR | 35.0% |
| GTTCTTTCTGTTGTATGCAT+AGG | - | chr2_2:4189704-4189723 | Msa0231860:CDS | 35.0% | |
| TGATGAAGCTCAGTCAAAAA+GGG | - | chr2_2:4190018-4190037 | Msa0231860:CDS | 35.0% | |
| CTATAGGATACTTCAATGTG+AGG | + | chr2_2:4190048-4190067 | None:intergenic | 35.0% | |
| ! | TTGAAGTATCCTATAGAGCA+TGG | - | chr2_2:4190052-4190071 | Msa0231860:CDS | 35.0% |
| CTAACTATACCATGCTCTAT+AGG | + | chr2_2:4190064-4190083 | None:intergenic | 35.0% | |
| AGCATGGTATAGTTAGTAAC+TGG | - | chr2_2:4190068-4190087 | Msa0231860:CDS | 35.0% | |
| GCATGGTATAGTTAGTAACT+GGG | - | chr2_2:4190069-4190088 | Msa0231860:CDS | 35.0% | |
| CATCAACAAAAACAAACCTG+TGG | + | chr2_2:4190299-4190318 | None:intergenic | 35.0% | |
| TGTGTAATAATGCTGTGAGT+TGG | - | chr2_2:4190379-4190398 | Msa0231860:CDS | 35.0% | |
| GTCTTTAAACTTCGGTTAAC+TGG | - | chr2_2:4190453-4190472 | Msa0231860:CDS | 35.0% | |
| ! | TTGTAACGCTATTTCCTTCA+TGG | - | chr2_2:4190745-4190764 | Msa0231860:intron | 35.0% |
| AGAGCATACCCTTCATATAT+GGG | + | chr2_2:4190835-4190854 | None:intergenic | 35.0% | |
| ! | AAGAGCATACCCTTCATATA+TGG | + | chr2_2:4190836-4190855 | None:intergenic | 35.0% |
| ATCCAAACGAAGAATTGCAT+GGG | + | chr2_2:4190860-4190879 | None:intergenic | 35.0% | |
| CTAGTTTCTCTTTGACATCA+CGG | + | chr2_2:4190972-4190991 | None:intergenic | 35.0% | |
| CAAAGAGAAACTAGCATATG+TGG | - | chr2_2:4190978-4190997 | Msa0231860:CDS | 35.0% | |
| ATCAACATCACACTTCATGA+TGG | + | chr2_2:4191187-4191206 | None:intergenic | 35.0% | |
| GTGTGATGTTGATATTAGGA+AGG | - | chr2_2:4191194-4191213 | Msa0231860:CDS | 35.0% | |
| TCCAAGTAGCATGAAAATCA+AGG | - | chr2_2:4191305-4191324 | Msa0231860:CDS | 35.0% | |
| ! | ACCTTGATTTTCATGCTACT+TGG | + | chr2_2:4191309-4191328 | None:intergenic | 35.0% |
| AAGTAGCATGAAAATCAAGG+TGG | - | chr2_2:4191308-4191327 | Msa0231860:CDS | 35.0% | |
| GTCCATTCCATTATGACAAT+TGG | + | chr2_2:4191457-4191476 | None:intergenic | 35.0% | |
| ! | GACCATTTTATGGGATTCAT+GGG | - | chr2_2:4191474-4191493 | Msa0231860:CDS | 35.0% |
| ! | ACCATTTTATGGGATTCATG+GGG | - | chr2_2:4191475-4191494 | Msa0231860:CDS | 35.0% |
| AGATTCATCATATTCACCCT+TGG | + | chr2_2:4191537-4191556 | None:intergenic | 35.0% | |
| AAGGGTGAATATGATGAATC+TGG | - | chr2_2:4191536-4191555 | Msa0231860:intron | 35.0% | |
| AGGGTGAATATGATGAATCT+GGG | - | chr2_2:4191537-4191556 | Msa0231860:intron | 35.0% | |
| TGCCATATTTCAGTCAAGTT+TGG | - | chr2_2:4191634-4191653 | Msa0231860:intron | 35.0% | |
| ATGTTTCTTCTTTAGGTCCT+TGG | - | chr2_2:4191738-4191757 | Msa0231860:intron | 35.0% | |
| ! | TAAAAATAGTCTGGCTTCCA+AGG | + | chr2_2:4191758-4191777 | None:intergenic | 35.0% |
| TGAACTTTGTAGGTTCTGTT+TGG | - | chr2_2:4191798-4191817 | Msa0231860:intron | 35.0% | |
| TTCATGCTGGTCATGAATTT+AGG | - | chr2_2:4191843-4191862 | Msa0231860:intron | 35.0% | |
| ! | ATATCTATTTCTCCCAGACA+GGG | - | chr2_2:4191898-4191917 | Msa0231860:intron | 35.0% |
| GCAAATCAAACAAACCCTAT+AGG | + | chr2_2:4192041-4192060 | None:intergenic | 35.0% | |
| AAAGTGTGTCAGAGAGAACA+AGG | + | chr2_2:4189142-4189161 | None:intergenic | 40.0% | |
| !! | AAAGCGTTAGGATTTTGCAG+CGG | + | chr2_2:4189207-4189226 | None:intergenic | 40.0% |
| TTGAAACGCACCTTGTTAGA+AGG | + | chr2_2:4189232-4189251 | None:intergenic | 40.0% | |
| GATCGGAAACATGCATATGA+AGG | + | chr2_2:4189557-4189576 | None:intergenic | 40.0% | |
| CTTGTACTATGTTTGCTTGC+AGG | - | chr2_2:4189886-4189905 | Msa0231860:CDS | 40.0% | |
| GTGATGAAGCTCAGTCAAAA+AGG | - | chr2_2:4190017-4190036 | Msa0231860:CDS | 40.0% | |
| GATGAAGCTCAGTCAAAAAG+GGG | - | chr2_2:4190019-4190038 | Msa0231860:CDS | 40.0% | |
| AGTTAGTAACTGGGACGATA+TGG | - | chr2_2:4190078-4190097 | Msa0231860:CDS | 40.0% | |
| GGGACGATATGGAAAAGATT+TGG | - | chr2_2:4190089-4190108 | Msa0231860:CDS | 40.0% | |
| !! | CTATTGGCTTTAGGATTGAG+TGG | + | chr2_2:4190181-4190200 | None:intergenic | 40.0% |
| ! | CTGGGTCATCTTTTCTCTAT+TGG | + | chr2_2:4190197-4190216 | None:intergenic | 40.0% |
| TGGATTGCAACATACATTGC+AGG | + | chr2_2:4190244-4190263 | None:intergenic | 40.0% | |
| TGCAATGTATGTTGCAATCC+AGG | - | chr2_2:4190243-4190262 | Msa0231860:CDS | 40.0% | |
| ACTGGCATACAGAGATAAGA+CGG | + | chr2_2:4190269-4190288 | None:intergenic | 40.0% | |
| GTCTTGAAACTTTGGTTAGC+TGG | - | chr2_2:4190536-4190555 | Msa0231860:intron | 40.0% | |
| ! | GTAGGTATTGTGCTTGATTC+TGG | - | chr2_2:4190787-4190806 | Msa0231860:intron | 40.0% |
| ATTGTGCTTGATTCTGGTGA+TGG | - | chr2_2:4190793-4190812 | Msa0231860:intron | 40.0% | |
| ACACAGTGCCCATATATGAA+GGG | - | chr2_2:4190824-4190843 | Msa0231860:intron | 40.0% | |
| TCCAAACGAAGAATTGCATG+GGG | + | chr2_2:4190859-4190878 | None:intergenic | 40.0% | |
| GATCCAAACGAAGAATTGCA+TGG | + | chr2_2:4190861-4190880 | None:intergenic | 40.0% | |
| ATTCTTCGTTTGGATCTTGC+TGG | - | chr2_2:4190865-4190884 | Msa0231860:intron | 40.0% | |
| TTCTTCGTTTGGATCTTGCT+GGG | - | chr2_2:4190866-4190885 | Msa0231860:intron | 40.0% | |
| ! | GCGTGATTTAACAGAGTACT+TGG | - | chr2_2:4190888-4190907 | Msa0231860:intron | 40.0% |
| GTGAAAATTCTCACTGAGAG+AGG | - | chr2_2:4190910-4190929 | Msa0231860:intron | 40.0% | |
| ATTGTTATGACCTGTCCATC+AGG | + | chr2_2:4191072-4191091 | None:intergenic | 40.0% | |
| GATGGACAGGTCATAACAAT+AGG | - | chr2_2:4191072-4191091 | Msa0231860:CDS | 40.0% | |
| GCTTCCATACCAATTAGAGA+AGG | + | chr2_2:4191135-4191154 | None:intergenic | 40.0% | |
| CTAATTGGTATGGAAGCTAC+TGG | - | chr2_2:4191138-4191157 | Msa0231860:CDS | 40.0% | |
| GGAAATATTGTGCTTAGTGG+AGG | - | chr2_2:4191225-4191244 | Msa0231860:CDS | 40.0% | |
| !! | CACTGATTTCCTTGCTCATA+CGG | + | chr2_2:4191278-4191297 | None:intergenic | 40.0% |
| ATCACTCAGTACCTTTCAAC+AGG | - | chr2_2:4191383-4191402 | Msa0231860:intron | 40.0% | |
| GTGAGTTCATACCTGTTGAA+AGG | + | chr2_2:4191397-4191416 | None:intergenic | 40.0% | |
| ! | GGACCATTTTATGGGATTCA+TGG | - | chr2_2:4191473-4191492 | Msa0231860:CDS | 40.0% |
| ACCCCATGAATCCCATAAAA+TGG | + | chr2_2:4191479-4191498 | None:intergenic | 40.0% | |
| ! | TTTTTATGCAATTGGCGGGA+TGG | - | chr2_2:4191772-4191791 | Msa0231860:intron | 40.0% |
| ! | GGGATGGTATTGAACTTTGT+AGG | - | chr2_2:4191788-4191807 | Msa0231860:intron | 40.0% |
| GAATTTAGGTGCCTCTAGTT+AGG | - | chr2_2:4191857-4191876 | Msa0231860:intron | 40.0% | |
| ! | CATATCTATTTCTCCCAGAC+AGG | - | chr2_2:4191897-4191916 | Msa0231860:intron | 40.0% |
| TGACTCAAAATTCCCTGTCT+GGG | + | chr2_2:4191913-4191932 | None:intergenic | 40.0% | |
| ATGACTCAAAATTCCCTGTC+TGG | + | chr2_2:4191914-4191933 | None:intergenic | 40.0% | |
| ! | TAGGATTTTGCAGCGGAGAA+CGG | + | chr2_2:4189200-4189219 | None:intergenic | 45.0% |
| !!! | AAGCTGCTTTTTGATGCACC+TGG | - | chr2_2:4189425-4189444 | Msa0231860:three_prime_UTR | 45.0% |
| CAACCTCTTGTCGTTGACAA+TGG | - | chr2_2:4189757-4189776 | Msa0231860:intron | 45.0% | |
| GTTCCATTGTCAACGACAAG+AGG | + | chr2_2:4189763-4189782 | None:intergenic | 45.0% | |
| CTTGTCGTTGACAATGGAAC+TGG | - | chr2_2:4189763-4189782 | Msa0231860:intron | 45.0% | |
| CGTTGACAATGGAACTGGAA+TGG | - | chr2_2:4189768-4189787 | Msa0231860:intron | 45.0% | |
| CAATGGAACTGGAATGGTCA+AGG | - | chr2_2:4189774-4189793 | Msa0231860:intron | 45.0% | |
| TACTATGTTTGCTTGCAGGC+TGG | - | chr2_2:4189890-4189909 | Msa0231860:CDS | 45.0% | |
| GTCATACCGGTGTAATGGTT+GGG | - | chr2_2:4189969-4189988 | Msa0231860:CDS | 45.0% | |
| GGTCAGAAGGATGCTTATGT+AGG | - | chr2_2:4189995-4190014 | Msa0231860:CDS | 45.0% | |
| ! | TTTAGGATTGAGTGGAGCCT+CGG | + | chr2_2:4190173-4190192 | None:intergenic | 45.0% |
| GTCTTATCTCTGTATGCCAG+TGG | - | chr2_2:4190268-4190287 | Msa0231860:CDS | 45.0% | |
| CACACAGTGCCCATATATGA+AGG | - | chr2_2:4190823-4190842 | Msa0231860:intron | 45.0% | |
| TCCCCATGCAATTCTTCGTT+TGG | - | chr2_2:4190855-4190874 | Msa0231860:intron | 45.0% | |
| GACAATTTCCTTCTCAGCTG+AGG | + | chr2_2:4190950-4190969 | None:intergenic | 45.0% | |
| !! | AGAAGGCTGGAAGAGTACTT+CGG | + | chr2_2:4191118-4191137 | None:intergenic | 45.0% |
| CTCTTCCAGCCTTCTCTAAT+TGG | - | chr2_2:4191123-4191142 | Msa0231860:CDS | 45.0% | |
| CCATACCAATTAGAGAAGGC+TGG | + | chr2_2:4191131-4191150 | None:intergenic | 45.0% | |
| CCAGCCTTCTCTAATTGGTA+TGG | - | chr2_2:4191128-4191147 | Msa0231860:CDS | 45.0% | |
| GGAGGTTCTACTATGTTTCC+TGG | - | chr2_2:4191243-4191262 | Msa0231860:CDS | 45.0% | |
| AATTGCTGACCGTATGAGCA+AGG | - | chr2_2:4191266-4191285 | Msa0231860:CDS | 45.0% | |
| ! | AGGAAGTACAGTGTCTGGAT+TGG | - | chr2_2:4191345-4191364 | Msa0231860:intron | 45.0% |
| ! | AAGTACAGTGTCTGGATTGG+TGG | - | chr2_2:4191348-4191367 | Msa0231860:intron | 45.0% |
| !! | AGTACAGTGTCTGGATTGGT+GGG | - | chr2_2:4191349-4191368 | Msa0231860:intron | 45.0% |
| TATGCAGATGTGGATCTCCA+AGG | - | chr2_2:4191517-4191536 | Msa0231860:exon | 45.0% | |
| ATGCAGATGTGGATCTCCAA+GGG | - | chr2_2:4191518-4191537 | Msa0231860:exon | 45.0% | |
| CACTTTCGGTGAACAATAGC+TGG | + | chr2_2:4191563-4191582 | None:intergenic | 45.0% | |
| !! | ACCGAAAGTGCTTCTGAGTT+GGG | - | chr2_2:4191573-4191592 | Msa0231860:intron | 45.0% |
| !! | ACCCAACTCAGAAGCACTTT+CGG | + | chr2_2:4191577-4191596 | None:intergenic | 45.0% |
| TTTAGGTGCCTCTAGTTAGG+AGG | - | chr2_2:4191860-4191879 | Msa0231860:intron | 45.0% | |
| !! | TATGAGGTGATGGGCCTATA+GGG | - | chr2_2:4192024-4192043 | Msa0231860:five_prime_UTR | 45.0% |
| ! | TTGCAGGTGATGATGCTCCT+AGG | - | chr2_2:4189915-4189934 | Msa0231860:CDS | 50.0% |
| ! | TGCAGGTGATGATGCTCCTA+GGG | - | chr2_2:4189916-4189935 | Msa0231860:CDS | 50.0% |
| CCCAATGATACTGGGGAACA+CGG | + | chr2_2:4189942-4189961 | None:intergenic | 50.0% | |
| CCGTGTTCCCCAGTATCATT+GGG | - | chr2_2:4189939-4189958 | Msa0231860:CDS | 50.0% | |
| ACCTCGTCATACCGGTGTAA+TGG | - | chr2_2:4189964-4189983 | Msa0231860:CDS | 50.0% | |
| ACCATTACACCGGTATGACG+AGG | + | chr2_2:4189968-4189987 | None:intergenic | 50.0% | |
| CGTCATACCGGTGTAATGGT+TGG | - | chr2_2:4189968-4189987 | Msa0231860:CDS | 50.0% | |
| TACCGGTGTAATGGTTGGGA+TGG | - | chr2_2:4189973-4189992 | Msa0231860:CDS | 50.0% | |
| ACCGGTGTAATGGTTGGGAT+GGG | - | chr2_2:4189974-4189993 | Msa0231860:CDS | 50.0% | |
| ACCCATCCCAACCATTACAC+CGG | + | chr2_2:4189978-4189997 | None:intergenic | 50.0% | |
| AATGGTTGGGATGGGTCAGA+AGG | - | chr2_2:4189982-4190001 | Msa0231860:CDS | 50.0% | |
| ! | AGAAGCACAGGGTGTTCTTC+TGG | + | chr2_2:4190148-4190167 | None:intergenic | 50.0% |
| CATACAGAGATAAGACGGCC+TGG | + | chr2_2:4190264-4190283 | None:intergenic | 50.0% | |
| !! | CTTCTCAGCTGAGGTACTGA+AGG | + | chr2_2:4190941-4190960 | None:intergenic | 50.0% |
| CTTCAGTACCTCAGCTGAGA+AGG | - | chr2_2:4190939-4190958 | Msa0231860:intron | 50.0% | |
| CAACTCGTAGCTCTTCTCCA+CGG | + | chr2_2:4191049-4191068 | None:intergenic | 50.0% | |
| AAGAGCTACGAGTTGCCTGA+TGG | - | chr2_2:4191054-4191073 | Msa0231860:CDS | 50.0% | |
| !! | AAGGCTGGAAGAGTACTTCG+GGG | + | chr2_2:4191116-4191135 | None:intergenic | 50.0% |
| !! | GAAGGCTGGAAGAGTACTTC+GGG | + | chr2_2:4191117-4191136 | None:intergenic | 50.0% |
| CTCATACGGTCAGCAATTCC+AGG | + | chr2_2:4191264-4191283 | None:intergenic | 50.0% | |
| ACACTGTACTTCCTCTCAGG+AGG | + | chr2_2:4191339-4191358 | None:intergenic | 50.0% | |
| CAGACACTGTACTTCCTCTC+AGG | + | chr2_2:4191342-4191361 | None:intergenic | 50.0% | |
| ! | CTGAGAGGAAGTACAGTGTC+TGG | - | chr2_2:4191340-4191359 | Msa0231860:intron | 50.0% |
| !! | CTGGATTGGTGGGTCTATCT+TGG | - | chr2_2:4191359-4191378 | Msa0231860:intron | 50.0% |
| !! | CACCGAAAGTGCTTCTGAGT+TGG | - | chr2_2:4191572-4191591 | Msa0231860:intron | 50.0% |
| !! | GTATGAGGTGATGGGCCTAT+AGG | - | chr2_2:4192023-4192042 | Msa0231860:five_prime_UTR | 50.0% |
| !! | CGAGGAGTGGGAAGTGTTAC+AGG | + | chr2_2:4189165-4189184 | None:intergenic | 55.0% |
| ! | GATTTTGCAGCGGAGAACGG+TGG | + | chr2_2:4189197-4189216 | None:intergenic | 55.0% |
| !!! | TGCTTGCAGGCTGGTTTTGC+AGG | - | chr2_2:4189899-4189918 | Msa0231860:CDS | 55.0% |
| GCCGTGTTCCCCAGTATCAT+TGG | - | chr2_2:4189938-4189957 | Msa0231860:CDS | 55.0% | |
| GAGGTCGCCCAATGATACTG+GGG | + | chr2_2:4189949-4189968 | None:intergenic | 55.0% | |
| CGAGGTCGCCCAATGATACT+GGG | + | chr2_2:4189950-4189969 | None:intergenic | 55.0% | |
| ACGAGGTCGCCCAATGATAC+TGG | + | chr2_2:4189951-4189970 | None:intergenic | 55.0% | |
| ATTGGGCGACCTCGTCATAC+CGG | - | chr2_2:4189956-4189975 | Msa0231860:CDS | 55.0% | |
| ACACCCTGTGCTTCTTACCG+AGG | - | chr2_2:4190153-4190172 | Msa0231860:CDS | 55.0% | |
| ! | GAGCCTCGGTAAGAAGCACA+GGG | + | chr2_2:4190159-4190178 | None:intergenic | 55.0% |
| TATGCCAGTGGACGTACCAC+AGG | - | chr2_2:4190280-4190299 | Msa0231860:CDS | 55.0% | |
| CAAACCTGTGGTACGTCCAC+TGG | + | chr2_2:4190287-4190306 | None:intergenic | 55.0% | |
| ! | CTACGAGTTGCCTGATGGAC+AGG | - | chr2_2:4191059-4191078 | Msa0231860:CDS | 55.0% |
| TTCGGGGCAACGGAATCTCT+CGG | + | chr2_2:4191100-4191119 | None:intergenic | 55.0% | |
| !! | GGAAGAGTACTTCGGGGCAA+CGG | + | chr2_2:4191110-4191129 | None:intergenic | 55.0% |
| AGGTGCCTCTAGTTAGGAGG+AGG | - | chr2_2:4191863-4191882 | Msa0231860:intron | 55.0% | |
| GGTGCCTCTAGTTAGGAGGA+GGG | - | chr2_2:4191864-4191883 | Msa0231860:intron | 55.0% | |
| CTCACCCTCCTCCTAACTAG+AGG | + | chr2_2:4191871-4191890 | None:intergenic | 55.0% | |
| TGGAGAAGCGAGCGAGGAGT+GGG | + | chr2_2:4189177-4189196 | None:intergenic | 60.0% | |
| ATACTGGGGAACACGGCCCT+AGG | + | chr2_2:4189935-4189954 | None:intergenic | 60.0% | |
| ! | GGAGCCTCGGTAAGAAGCAC+AGG | + | chr2_2:4190160-4190179 | None:intergenic | 60.0% |
| TACCAAGAGCAGCTCTGCCG+TGG | - | chr2_2:4191029-4191048 | Msa0231860:CDS | 60.0% | |
| AGGTGGTTGCACCTCCTGAG+AGG | - | chr2_2:4191325-4191344 | Msa0231860:CDS | 60.0% | |
| GTGGAGAAGCGAGCGAGGAG+TGG | + | chr2_2:4189178-4189197 | None:intergenic | 65.0% | |
| GAACGGTGGAGAAGCGAGCG+AGG | + | chr2_2:4189183-4189202 | None:intergenic | 65.0% | |
| CTCCACGGCAGAGCTGCTCT+TGG | + | chr2_2:4191034-4191053 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 4189116 | 4192147 | 4189116 | ID=Msa0231860;Name=Msa0231860 |
| chr2_2 | mRNA | 4189116 | 4192147 | 4189116 | ID=Msa0231860-mRNA-1;Parent=Msa0231860;Name=Msa0231860-mRNA-1;_AED=0.01;_eAED=0.01;_QI=135|1|1|1|0.75|0.6|5|558|377 |
| chr2_2 | exon | 4189116 | 4189739 | 4189116 | ID=Msa0231860-mRNA-1:exon:1742;Parent=Msa0231860-mRNA-1 |
| chr2_2 | exon | 4189859 | 4190472 | 4189859 | ID=Msa0231860-mRNA-1:exon:1741;Parent=Msa0231860-mRNA-1 |
| chr2_2 | exon | 4190962 | 4191355 | 4190962 | ID=Msa0231860-mRNA-1:exon:1740;Parent=Msa0231860-mRNA-1 |
| chr2_2 | exon | 4191468 | 4191537 | 4191468 | ID=Msa0231860-mRNA-1:exon:1739;Parent=Msa0231860-mRNA-1 |
| chr2_2 | exon | 4192023 | 4192147 | 4192023 | ID=Msa0231860-mRNA-1:exon:1738;Parent=Msa0231860-mRNA-1 |
| chr2_2 | five_prime_UTR | 4192023 | 4192147 | 4192023 | ID=Msa0231860-mRNA-1:five_prime_utr;Parent=Msa0231860-mRNA-1 |
| chr2_2 | five_prime_UTR | 4191528 | 4191537 | 4191528 | ID=Msa0231860-mRNA-1:five_prime_utr;Parent=Msa0231860-mRNA-1 |
| chr2_2 | CDS | 4191468 | 4191527 | 4191468 | ID=Msa0231860-mRNA-1:cds;Parent=Msa0231860-mRNA-1 |
| chr2_2 | CDS | 4190962 | 4191355 | 4190962 | ID=Msa0231860-mRNA-1:cds;Parent=Msa0231860-mRNA-1 |
| chr2_2 | CDS | 4189859 | 4190472 | 4189859 | ID=Msa0231860-mRNA-1:cds;Parent=Msa0231860-mRNA-1 |
| chr2_2 | CDS | 4189674 | 4189739 | 4189674 | ID=Msa0231860-mRNA-1:cds;Parent=Msa0231860-mRNA-1 |
| chr2_2 | three_prime_UTR | 4189116 | 4189673 | 4189116 | ID=Msa0231860-mRNA-1:three_prime_utr;Parent=Msa0231860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
