Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1309670 | XP_013443933.2 | 91.489 | 282 | 22 | 2 | 1 | 281 | 1 | 281 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1309670 | sp|D7SSD8|MJE1_VITVI | 53.488 | 258 | 115 | 4 | 26 | 281 | 6 | 260 | 8.03e-91 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1309670 | A0A396GJ92 | 91.489 | 282 | 22 | 2 | 1 | 281 | 1 | 281 | 0.0 | 526 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa1309670 | -0.802322 | 5.926163e-49 | -8.615850e-47 |
| Msa0011010 | Msa1309670 | 0.800627 | 1.318963e-48 | -8.615850e-47 |
| Msa0033190 | Msa1309670 | -0.809324 | 2.001611e-50 | -8.615850e-47 |
| Msa0074860 | Msa1309670 | -0.800629 | 1.317539e-48 | -8.615850e-47 |
| Msa0079840 | Msa1309670 | -0.807784 | 4.268127e-50 | -8.615850e-47 |
| Msa0605150 | Msa1309670 | -0.802152 | 6.423532e-49 | -8.615850e-47 |
| Msa0615070 | Msa1309670 | 0.818205 | 2.213446e-52 | -8.615850e-47 |
| Msa0628200 | Msa1309670 | 0.831196 | 1.914980e-55 | -8.615850e-47 |
| Msa0633070 | Msa1309670 | 0.822127 | 2.797555e-53 | -8.615850e-47 |
| Msa0637590 | Msa1309670 | 0.804277 | 2.333442e-49 | -8.615850e-47 |
| Msa0637700 | Msa1309670 | 0.820601 | 6.292293e-53 | -8.615850e-47 |
| Msa0644340 | Msa1309670 | 0.801561 | 8.495297e-49 | -8.615850e-47 |
| Msa0680460 | Msa1309670 | 0.802183 | 6.331985e-49 | -8.615850e-47 |
| Msa0694320 | Msa1309670 | 0.819341 | 1.221968e-52 | -8.615850e-47 |
| Msa0699800 | Msa1309670 | 0.826383 | 2.795900e-54 | -8.615850e-47 |
| Msa0719330 | Msa1309670 | -0.808539 | 2.946783e-50 | -8.615850e-47 |
| Msa0758880 | Msa1309670 | -0.811695 | 6.157259e-51 | -8.615850e-47 |
| Msa0772160 | Msa1309670 | -0.808404 | 3.149983e-50 | -8.615850e-47 |
| Msa0795910 | Msa1309670 | -0.809057 | 2.283724e-50 | -8.615850e-47 |
| Msa0801920 | Msa1309670 | -0.811481 | 6.850798e-51 | -8.615850e-47 |
| Msa0802600 | Msa1309670 | 0.804738 | 1.870466e-49 | -8.615850e-47 |
| Msa0829250 | Msa1309670 | -0.806045 | 9.955427e-50 | -8.615850e-47 |
| Msa0829990 | Msa1309670 | 0.800786 | 1.223912e-48 | -8.615850e-47 |
| Msa0833360 | Msa1309670 | -0.809527 | 1.810645e-50 | -8.615850e-47 |
| Msa0838120 | Msa1309670 | -0.811922 | 5.494239e-51 | -8.615850e-47 |
| Msa0124460 | Msa1309670 | -0.809072 | 2.267277e-50 | -8.615850e-47 |
| Msa0141410 | Msa1309670 | 0.820375 | 7.091974e-53 | -8.615850e-47 |
| Msa0161230 | Msa1309670 | 0.815141 | 1.076081e-51 | -8.615850e-47 |
| Msa0185040 | Msa1309670 | 0.804020 | 2.638884e-49 | -8.615850e-47 |
| Msa0207640 | Msa1309670 | 0.802469 | 5.528103e-49 | -8.615850e-47 |
| Msa0211460 | Msa1309670 | 0.806259 | 8.971944e-50 | -8.615850e-47 |
| Msa0212950 | Msa1309670 | -0.809922 | 1.489395e-50 | -8.615850e-47 |
| Msa0224870 | Msa1309670 | 0.801343 | 9.416625e-49 | -8.615850e-47 |
| Msa1229400 | Msa1309670 | 0.933076 | 3.251653e-95 | -8.615850e-47 |
| Msa1236680 | Msa1309670 | 0.807226 | 5.605511e-50 | -8.615850e-47 |
| Msa1239190 | Msa1309670 | 0.810400 | 1.174782e-50 | -8.615850e-47 |
| Msa1239210 | Msa1309670 | 0.829794 | 4.217931e-55 | -8.615850e-47 |
| Msa1254870 | Msa1309670 | 0.821751 | 3.417555e-53 | -8.615850e-47 |
| Msa1266750 | Msa1309670 | -0.803005 | 4.284446e-49 | -8.615850e-47 |
| Msa1269200 | Msa1309670 | 0.808951 | 2.405850e-50 | -8.615850e-47 |
| Msa1273320 | Msa1309670 | 0.812743 | 3.635775e-51 | -8.615850e-47 |
| Msa1291070 | Msa1309670 | -0.810227 | 1.280209e-50 | -8.615850e-47 |
| Msa1303690 | Msa1309670 | -0.800386 | 1.476474e-48 | -8.615850e-47 |
| Msa1309670 | Msa1319010 | 0.811028 | 8.589956e-51 | -8.615850e-47 |
| Msa1309670 | Msa1328430 | 0.821768 | 3.387143e-53 | -8.615850e-47 |
| Msa1309670 | Msa1341710 | -0.805802 | 1.119396e-49 | -8.615850e-47 |
| Msa1309670 | Msa1348180 | -0.803462 | 3.445900e-49 | -8.615850e-47 |
| Msa1309670 | Msa1355340 | 0.823689 | 1.209778e-53 | -8.615850e-47 |
| Msa1309670 | Msa1357840 | 0.806549 | 7.793625e-50 | -8.615850e-47 |
| Msa1309670 | Msa1363170 | -0.802195 | 6.295274e-49 | -8.615850e-47 |
| Msa1309670 | Msa1364690 | 0.809045 | 2.297173e-50 | -8.615850e-47 |
| Msa1309670 | Msa1398140 | 0.809822 | 1.564512e-50 | -8.615850e-47 |
| Msa1309670 | Msa1407810 | 0.806684 | 7.298267e-50 | -8.615850e-47 |
| Msa1309670 | Msa1408230 | -0.805250 | 1.461310e-49 | -8.615850e-47 |
| Msa1309670 | Msa1433360 | 0.801998 | 6.909069e-49 | -8.615850e-47 |
| Msa1309670 | Msa1437780 | 0.807882 | 4.068397e-50 | -8.615850e-47 |
| Msa1309670 | Msa1455200 | 0.811525 | 6.703767e-51 | -8.615850e-47 |
| Msa1309670 | Msa1459680 | -0.811563 | 6.576043e-51 | -8.615850e-47 |
| Msa0366510 | Msa1309670 | 0.807518 | 4.861561e-50 | -8.615850e-47 |
| Msa0369990 | Msa1309670 | 0.803379 | 3.585526e-49 | -8.615850e-47 |
| Msa0391270 | Msa1309670 | 0.804115 | 2.521590e-49 | -8.615850e-47 |
| Msa0405200 | Msa1309670 | 0.801329 | 9.480936e-49 | -8.615850e-47 |
| Msa0414480 | Msa1309670 | 0.806789 | 6.937252e-50 | -8.615850e-47 |
| Msa0416430 | Msa1309670 | -0.802780 | 4.768397e-49 | -8.615850e-47 |
| Msa0418160 | Msa1309670 | 0.804017 | 2.643824e-49 | -8.615850e-47 |
| Msa0436660 | Msa1309670 | -0.803106 | 4.083752e-49 | -8.615850e-47 |
| Msa0441240 | Msa1309670 | 0.804888 | 1.740117e-49 | -8.615850e-47 |
| Msa0449500 | Msa1309670 | 0.802976 | 4.344354e-49 | -8.615850e-47 |
| Msa0454770 | Msa1309670 | 0.811350 | 7.315006e-51 | -8.615850e-47 |
| Msa0464310 | Msa1309670 | 0.832260 | 1.046199e-55 | -8.615850e-47 |
| Msa0469770 | Msa1309670 | -0.810085 | 1.373554e-50 | -8.615850e-47 |
| Msa0474660 | Msa1309670 | -0.804793 | 1.821785e-49 | -8.615850e-47 |
| Msa0993710 | Msa1309670 | 0.800850 | 1.187547e-48 | -8.615850e-47 |
| Msa1006030 | Msa1309670 | 0.815242 | 1.022118e-51 | -8.615850e-47 |
| Msa1007900 | Msa1309670 | 0.806802 | 6.893410e-50 | -8.615850e-47 |
| Msa1020160 | Msa1309670 | -0.806476 | 8.077309e-50 | -8.615850e-47 |
| Msa1024480 | Msa1309670 | 0.809184 | 2.144915e-50 | -8.615850e-47 |
| Msa1029860 | Msa1309670 | 0.806556 | 7.769085e-50 | -8.615850e-47 |
| Msa1035050 | Msa1309670 | 0.836219 | 1.063923e-56 | -8.615850e-47 |
| Msa1044050 | Msa1309670 | -0.811040 | 8.538712e-51 | -8.615850e-47 |
| Msa1048350 | Msa1309670 | 0.802439 | 5.608426e-49 | -8.615850e-47 |
| Msa1062060 | Msa1309670 | 0.839521 | 1.508067e-57 | -8.615850e-47 |
| Msa1064940 | Msa1309670 | 0.805990 | 1.022283e-49 | -8.615850e-47 |
| Msa1075090 | Msa1309670 | 0.832677 | 8.246150e-56 | -8.615850e-47 |
| Msa1078120 | Msa1309670 | -0.800879 | 1.171604e-48 | -8.615850e-47 |
| Msa1100330 | Msa1309670 | 0.826575 | 2.516920e-54 | -8.615850e-47 |
| Msa0253230 | Msa1309670 | -0.814096 | 1.833530e-51 | -8.615850e-47 |
| Msa0266150 | Msa1309670 | -0.800377 | 1.483009e-48 | -8.615850e-47 |
| Msa0267700 | Msa1309670 | 0.809157 | 2.173788e-50 | -8.615850e-47 |
| Msa0269710 | Msa1309670 | 0.814287 | 1.663512e-51 | -8.615850e-47 |
| Msa0270730 | Msa1309670 | -0.801652 | 8.137236e-49 | -8.615850e-47 |
| Msa0271700 | Msa1309670 | 0.801345 | 9.405444e-49 | -8.615850e-47 |
| Msa0271720 | Msa1309670 | 0.802687 | 4.984093e-49 | -8.615850e-47 |
| Msa0275730 | Msa1309670 | 0.802897 | 4.510112e-49 | -8.615850e-47 |
| Msa0279810 | Msa1309670 | 0.808154 | 3.560704e-50 | -8.615850e-47 |
| Msa0287630 | Msa1309670 | 0.812402 | 4.316898e-51 | -8.615850e-47 |
| Msa0299130 | Msa1309670 | -0.801302 | 9.598543e-49 | -8.615850e-47 |
| Msa0316080 | Msa1309670 | -0.800758 | 1.240146e-48 | -8.615850e-47 |
| Msa0319220 | Msa1309670 | 0.809263 | 2.062566e-50 | -8.615850e-47 |
| Msa0345050 | Msa1309670 | 0.808437 | 3.098529e-50 | -8.615850e-47 |
| Msa0346170 | Msa1309670 | 0.835283 | 1.836297e-56 | -8.615850e-47 |
| Msa0356270 | Msa1309670 | 0.800486 | 1.408942e-48 | -8.615850e-47 |
| Msa1107220 | Msa1309670 | 0.840286 | 9.528943e-58 | -8.615850e-47 |
| Msa1107250 | Msa1309670 | 0.820610 | 6.263233e-53 | -8.615850e-47 |
| Msa1115980 | Msa1309670 | 0.801713 | 7.907557e-49 | -8.615850e-47 |
| Msa1132880 | Msa1309670 | -0.809553 | 1.787974e-50 | -8.615850e-47 |
| Msa1136760 | Msa1309670 | 0.812807 | 3.520913e-51 | -8.615850e-47 |
| Msa1148210 | Msa1309670 | 0.810957 | 8.901704e-51 | -8.615850e-47 |
| Msa1150740 | Msa1309670 | 0.813651 | 2.297799e-51 | -8.615850e-47 |
| Msa1150760 | Msa1309670 | 0.833193 | 6.137036e-56 | -8.615850e-47 |
| Msa1162430 | Msa1309670 | 0.806367 | 8.515798e-50 | -8.615850e-47 |
| Msa1167960 | Msa1309670 | 0.813561 | 2.405228e-51 | -8.615850e-47 |
| Msa1185270 | Msa1309670 | 0.822493 | 2.299979e-53 | -8.615850e-47 |
| Msa1191270 | Msa1309670 | 0.819298 | 1.249775e-52 | -8.615850e-47 |
| Msa1202110 | Msa1309670 | 0.821882 | 3.188459e-53 | -8.615850e-47 |
| Msa1206330 | Msa1309670 | 0.802998 | 4.298720e-49 | -8.615850e-47 |
| Msa1206380 | Msa1309670 | 0.800936 | 1.140869e-48 | -8.615850e-47 |
| Msa1223710 | Msa1309670 | 0.803961 | 2.714861e-49 | -8.615850e-47 |
| Msa0492330 | Msa1309670 | -0.801738 | 7.813874e-49 | -8.615850e-47 |
| Msa0497680 | Msa1309670 | 0.811299 | 7.504864e-51 | -8.615850e-47 |
| Msa0531050 | Msa1309670 | 0.825738 | 3.979798e-54 | -8.615850e-47 |
| Msa0538440 | Msa1309670 | 0.801660 | 8.106709e-49 | -8.615850e-47 |
| Msa0539260 | Msa1309670 | 0.830391 | 3.015488e-55 | -8.615850e-47 |
| Msa0556270 | Msa1309670 | 0.803246 | 3.820011e-49 | -8.615850e-47 |
| Msa0560950 | Msa1309670 | 0.806452 | 8.170176e-50 | -8.615850e-47 |
| Msa0567330 | Msa1309670 | 0.809646 | 1.707185e-50 | -8.615850e-47 |
| Msa0567570 | Msa1309670 | 0.800731 | 1.255949e-48 | -8.615850e-47 |
| Msa0576320 | Msa1309670 | 0.803312 | 3.701874e-49 | -8.615850e-47 |
| Msa0580410 | Msa1309670 | -0.809205 | 2.123382e-50 | -8.615850e-47 |
| Msa0580890 | Msa1309670 | -0.805873 | 1.081742e-49 | -8.615850e-47 |
| Msa0583270 | Msa1309670 | -0.813403 | 2.604810e-51 | -8.615850e-47 |
| Msa0588040 | Msa1309670 | 0.807812 | 4.209364e-50 | -8.615850e-47 |
| Msa0597800 | Msa1309670 | 0.804437 | 2.160689e-49 | -8.615850e-47 |
| Msa0597820 | Msa1309670 | 0.804774 | 1.838149e-49 | -8.615850e-47 |
| Msa0893220 | Msa1309670 | 0.816006 | 6.907887e-52 | -8.615850e-47 |
| Msa0896920 | Msa1309670 | 0.817171 | 3.787465e-52 | -8.615850e-47 |
| Msa0906660 | Msa1309670 | 0.800085 | 1.700429e-48 | -8.615850e-47 |
| Msa0941420 | Msa1309670 | -0.805353 | 1.390656e-49 | -8.615850e-47 |
| Msa0978550 | Msa1309670 | -0.802210 | 6.251612e-49 | -8.615850e-47 |
| Msa0978560 | Msa1309670 | -0.800398 | 1.468624e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1309670 | MtrunA17_Chr8g0336411 | 91.489 | 282 | 22 | 2 | 1 | 281 | 1 | 281 | 0.0 | 526 |
| Msa1309670 | MtrunA17_Chr8g0336401 | 87.676 | 284 | 32 | 1 | 1 | 281 | 1 | 284 | 0.0 | 513 |
| Msa1309670 | MtrunA17_Chr8g0336441 | 79.715 | 281 | 54 | 2 | 1 | 281 | 1 | 278 | 3.77e-163 | 454 |
| Msa1309670 | MtrunA17_Chr3g0104871 | 77.656 | 273 | 58 | 2 | 9 | 281 | 1 | 270 | 1.68e-151 | 424 |
| Msa1309670 | MtrunA17_Chr8g0336391 | 65.957 | 282 | 94 | 2 | 1 | 281 | 1 | 281 | 1.40e-128 | 366 |
| Msa1309670 | MtrunA17_Chr8g0336381 | 56.489 | 262 | 103 | 4 | 26 | 281 | 6 | 262 | 1.04e-103 | 303 |
| Msa1309670 | MtrunA17_Chr5g0402871 | 52.308 | 260 | 120 | 4 | 24 | 281 | 2 | 259 | 1.65e-92 | 274 |
| Msa1309670 | MtrunA17_Chr5g0402851 | 50.775 | 258 | 123 | 4 | 26 | 281 | 7 | 262 | 2.66e-90 | 268 |
| Msa1309670 | MtrunA17_Chr5g0402841 | 50.000 | 260 | 121 | 6 | 26 | 281 | 7 | 261 | 2.10e-87 | 261 |
| Msa1309670 | MtrunA17_Chr8g0374141 | 41.538 | 260 | 139 | 6 | 26 | 281 | 52 | 302 | 3.00e-61 | 196 |
| Msa1309670 | MtrunA17_Chr5g0402901 | 41.473 | 258 | 142 | 6 | 26 | 281 | 11 | 261 | 7.68e-58 | 186 |
| Msa1309670 | MtrunA17_Chr5g0402881 | 39.147 | 258 | 146 | 5 | 27 | 281 | 29 | 278 | 1.86e-54 | 177 |
| Msa1309670 | MtrunA17_Chr5g0428471 | 37.405 | 262 | 148 | 6 | 26 | 281 | 29 | 280 | 3.94e-49 | 164 |
| Msa1309670 | MtrunA17_Chr7g0219561 | 37.795 | 254 | 150 | 4 | 27 | 278 | 124 | 371 | 6.98e-48 | 163 |
| Msa1309670 | MtrunA17_Chr3g0128581 | 36.047 | 258 | 150 | 5 | 26 | 278 | 35 | 282 | 3.22e-45 | 154 |
| Msa1309670 | MtrunA17_Chr3g0077351 | 32.685 | 257 | 164 | 4 | 26 | 279 | 93 | 343 | 2.41e-41 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1309670 | AT3G50440.1 | 42.023 | 257 | 142 | 4 | 28 | 281 | 22 | 274 | 1.24e-65 | 206 |
| Msa1309670 | AT2G23600.1 | 43.243 | 259 | 140 | 4 | 26 | 281 | 8 | 262 | 2.22e-65 | 205 |
| Msa1309670 | AT2G23600.2 | 43.243 | 259 | 140 | 4 | 26 | 281 | 23 | 277 | 4.24e-65 | 205 |
| Msa1309670 | AT2G23620.1 | 42.966 | 263 | 135 | 5 | 26 | 281 | 8 | 262 | 1.77e-64 | 203 |
| Msa1309670 | AT2G23610.1 | 42.857 | 259 | 141 | 4 | 26 | 281 | 8 | 262 | 6.73e-64 | 201 |
| Msa1309670 | AT2G23580.1 | 43.071 | 267 | 134 | 9 | 24 | 281 | 5 | 262 | 1.18e-60 | 193 |
| Msa1309670 | AT2G23590.1 | 40.727 | 275 | 144 | 9 | 15 | 281 | 8 | 271 | 5.40e-60 | 192 |
| Msa1309670 | AT4G37150.1 | 40.809 | 272 | 127 | 8 | 26 | 281 | 2 | 255 | 1.44e-56 | 182 |
| Msa1309670 | AT2G23560.1 | 39.382 | 259 | 152 | 4 | 24 | 281 | 5 | 259 | 1.65e-54 | 177 |
| Msa1309670 | AT2G23550.1 | 40.075 | 267 | 142 | 8 | 24 | 281 | 5 | 262 | 2.17e-54 | 177 |
| Msa1309670 | AT2G23550.4 | 40.075 | 267 | 142 | 8 | 24 | 281 | 12 | 269 | 2.65e-54 | 177 |
| Msa1309670 | AT2G23610.2 | 38.281 | 256 | 112 | 4 | 26 | 281 | 8 | 217 | 5.32e-51 | 167 |
| Msa1309670 | AT1G33990.1 | 36.187 | 257 | 155 | 4 | 26 | 279 | 96 | 346 | 4.73e-50 | 169 |
| Msa1309670 | AT1G26360.1 | 38.168 | 262 | 150 | 6 | 22 | 279 | 184 | 437 | 2.08e-49 | 169 |
| Msa1309670 | AT1G69240.1 | 35.878 | 262 | 158 | 5 | 22 | 279 | 182 | 437 | 2.40e-48 | 166 |
| Msa1309670 | AT5G10300.1 | 38.281 | 256 | 153 | 4 | 27 | 281 | 6 | 257 | 2.52e-48 | 161 |
| Msa1309670 | AT4G09900.1 | 35.798 | 257 | 156 | 5 | 26 | 279 | 97 | 347 | 4.31e-48 | 163 |
| Msa1309670 | AT5G58310.1 | 34.328 | 268 | 146 | 7 | 27 | 278 | 5 | 258 | 1.42e-46 | 157 |
| Msa1309670 | AT3G29770.1 | 39.768 | 259 | 140 | 7 | 27 | 279 | 138 | 386 | 2.42e-46 | 160 |
| Msa1309670 | AT4G16690.1 | 35.317 | 252 | 153 | 5 | 27 | 276 | 12 | 255 | 3.93e-45 | 153 |
| Msa1309670 | AT3G10870.1 | 34.646 | 254 | 161 | 4 | 27 | 278 | 20 | 270 | 1.10e-44 | 152 |
| Msa1309670 | AT2G23600.3 | 45.732 | 164 | 85 | 2 | 26 | 186 | 23 | 185 | 9.08e-43 | 145 |
| Msa1309670 | AT2G23550.2 | 35.714 | 266 | 126 | 7 | 24 | 281 | 5 | 233 | 1.04e-41 | 144 |
| Msa1309670 | AT2G23580.2 | 44.970 | 169 | 80 | 6 | 24 | 184 | 5 | 168 | 2.31e-37 | 131 |
| Msa1309670 | AT4G37140.1 | 50.459 | 109 | 53 | 1 | 26 | 134 | 2 | 109 | 5.23e-34 | 120 |
| Msa1309670 | AT2G23550.3 | 42.012 | 169 | 85 | 5 | 24 | 184 | 12 | 175 | 7.61e-33 | 120 |
| Msa1309670 | AT5G10300.2 | 41.718 | 163 | 93 | 2 | 27 | 188 | 6 | 167 | 1.39e-31 | 116 |
| Msa1309670 | AT2G23570.1 | 39.011 | 182 | 101 | 5 | 105 | 281 | 2 | 178 | 6.75e-29 | 108 |
| Msa1309670 | AT4G37140.2 | 50.000 | 92 | 45 | 1 | 26 | 117 | 2 | 92 | 1.27e-28 | 105 |
| Msa1309670 | AT3G29770.2 | 48.649 | 74 | 37 | 1 | 27 | 100 | 138 | 210 | 1.10e-16 | 78.6 |
Find 56 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAACCTTTGATATCATTTA+TGG | 0.078023 | 8_4:-6196060 | Msa1309670:CDS |
| CCACAGTTATTGTTCTTAAA+TGG | 0.151463 | 8_4:-6195330 | Msa1309670:CDS |
| GAATTACAGTTGTGAAATTA+AGG | 0.203942 | 8_4:+6195901 | None:intergenic |
| CCTCCAACTGCCTTGTTGTT+TGG | 0.223716 | 8_4:-6195297 | Msa1309670:CDS |
| ATTCTTGTGGGTCATAGTTT+TGG | 0.257233 | 8_4:-6196011 | Msa1309670:CDS |
| TAATGTTAGCACAATTGATT+TGG | 0.307926 | 8_4:-6196144 | Msa1309670:CDS |
| TGCTGAGGTGAAAGTGATAA+AGG | 0.318232 | 8_4:-6194128 | Msa1309670:CDS |
| TTGCTGATAATGAAGACTTT+TGG | 0.340901 | 8_4:+6194211 | None:intergenic |
| TGAATCTCTTGGACCTGTAT+TGG | 0.346355 | 8_4:+6196104 | None:intergenic |
| TACTCTTCCATTCCTTTGCT+TGG | 0.354752 | 8_4:+6194234 | None:intergenic |
| CAGATGAGATGCCAAGAGTT+TGG | 0.357433 | 8_4:+6195272 | None:intergenic |
| TTTGTGCTTGTTCATGGAGC+TGG | 0.361826 | 8_4:-6196221 | Msa1309670:CDS |
| ATATCATCAAGATGTTTAAC+CGG | 0.368404 | 8_4:-6196313 | None:intergenic |
| ACAATTGATTTGGCTGCTTC+AGG | 0.377565 | 8_4:-6196134 | Msa1309670:CDS |
| AATTACAGTTGTGAAATTAA+GGG | 0.385824 | 8_4:+6195902 | None:intergenic |
| AAGGCAGTTGGAGGACTGTT+TGG | 0.392141 | 8_4:+6195306 | None:intergenic |
| ATCACTTTCACCTCAGCATA+AGG | 0.395471 | 8_4:+6194133 | None:intergenic |
| AAGCACTTTGTGCTTGTTCA+TGG | 0.396917 | 8_4:-6196227 | Msa1309670:CDS |
| TGGTGCATGGTGTTGGTATA+AGG | 0.400591 | 8_4:-6196195 | Msa1309670:CDS |
| AAATATTTGAATGAATCTCT+TGG | 0.405238 | 8_4:+6196093 | None:intergenic |
| TTTGACACTTGGATCATCAT+TGG | 0.411517 | 8_4:-6194314 | Msa1309670:CDS |
| TCAACACAACGTGTCTTTCC+CGG | 0.414773 | 8_4:+6196294 | None:intergenic |
| GTTGTTTGGATCCAAACTCT+TGG | 0.434228 | 8_4:-6195283 | Msa1309670:CDS |
| GATAAAGGGTTCAGATCATA+TGG | 0.444154 | 8_4:-6194113 | Msa1309670:CDS |
| CATGCGTAGGATTTGACACT+TGG | 0.451930 | 8_4:-6194325 | Msa1309670:intron |
| TTCTCTTCCTCCAAAGGAAA+AGG | 0.464266 | 8_4:-6196036 | Msa1309670:CDS |
| GATACCCTTATCTGTTGCTA+TGG | 0.489986 | 8_4:-6195985 | Msa1309670:CDS |
| AAGGAAAAGGTGATTCTTGT+GGG | 0.492621 | 8_4:-6196023 | Msa1309670:CDS |
| GCTGAGGTGAAAGTGATAAA+GGG | 0.493443 | 8_4:-6194127 | Msa1309670:CDS |
| TTAGAGAGGATATGCAGTTA+TGG | 0.507529 | 8_4:-6194174 | Msa1309670:CDS |
| ATGGAGCTGGCCATGGTGCA+TGG | 0.509766 | 8_4:-6196208 | Msa1309670:CDS |
| TTATGGATAATTGAGAGAAC+TGG | 0.510143 | 8_4:-6194157 | Msa1309670:CDS |
| GCAACTATGCTTAAATCAGC+TGG | 0.513884 | 8_4:-6196170 | Msa1309670:CDS |
| TTCAGGTATCAATCCAATAC+AGG | 0.517321 | 8_4:-6196117 | Msa1309670:CDS |
| TATGGATTCTCTTCCTCCAA+AGG | 0.520175 | 8_4:-6196042 | Msa1309670:CDS |
| GATCCAAACAACAAGGCAGT+TGG | 0.527636 | 8_4:+6195294 | None:intergenic |
| CTGGCCATGGTGCATGGTGT+TGG | 0.530072 | 8_4:-6196202 | Msa1309670:CDS |
| TTGTCATTAAAGATAGGATG+TGG | 0.530621 | 8_4:+6194286 | None:intergenic |
| CTTGTTCATGGAGCTGGCCA+TGG | 0.536035 | 8_4:-6196215 | Msa1309670:CDS |
| AAAGGAAAAGGTGATTCTTG+TGG | 0.537925 | 8_4:-6196024 | Msa1309670:CDS |
| AGAGTTACCAAGCAAAGGAA+TGG | 0.542269 | 8_4:-6194241 | Msa1309670:CDS |
| TTTCACAACTGTAATTCAAG+AGG | 0.547572 | 8_4:-6195895 | Msa1309670:intron |
| GTATCAATTATCGCCTAATG+AGG | 0.552044 | 8_4:-6195250 | Msa1309670:intron |
| TTTAAGAACAATAACTGTGG+TGG | 0.553701 | 8_4:+6195333 | None:intergenic |
| AAAGTCTTCATTATCAGCAA+AGG | 0.566673 | 8_4:-6194208 | Msa1309670:CDS |
| CCAAACAACAAGGCAGTTGG+AGG | 0.578597 | 8_4:+6195297 | None:intergenic |
| TATCATCAAGATGTTTAACC+GGG | 0.579472 | 8_4:-6196312 | None:intergenic |
| AAACAAGAGTTACCAAGCAA+AGG | 0.598148 | 8_4:-6194246 | Msa1309670:CDS |
| CACTTGGATCATCATTGGTG+AGG | 0.609021 | 8_4:-6194309 | Msa1309670:CDS |
| GAATCCATAAATGATATCAA+AGG | 0.609540 | 8_4:+6196056 | None:intergenic |
| AGGAGACAATATCATTAGAG+AGG | 0.640958 | 8_4:-6194188 | Msa1309670:CDS |
| TATACCAACACCATGCACCA+TGG | 0.666354 | 8_4:+6196198 | None:intergenic |
| GAGTTTGGATCCAAACAACA+AGG | 0.680669 | 8_4:+6195287 | None:intergenic |
| AGCAATCTTTAGTATGTGAG+AGG | 0.702231 | 8_4:+6194063 | None:intergenic |
| CCATTTAAGAACAATAACTG+TGG | 0.713087 | 8_4:+6195330 | None:intergenic |
| GAGAACTGGTCCTTATGCTG+AGG | 0.742670 | 8_4:-6194143 | Msa1309670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTATATTAATAAAAATT+AGG | - | chr8_4:6194678-6194697 | Msa1309670:intron | 0.0% |
| !! | ATTATATATATATATATATA+TGG | - | chr8_4:6195597-6195616 | Msa1309670:intron | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr8_4:6195946-6195965 | None:intergenic | 0.0% |
| !! | TATTTATATTAATAAAAATT+AGG | - | chr8_4:6194678-6194697 | Msa1309670:intron | 0.0% |
| !! | ATTATATATATATATATATA+TGG | - | chr8_4:6195597-6195616 | Msa1309670:intron | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr8_4:6195946-6195965 | None:intergenic | 0.0% |
| !! | AATATAAATATATATAACCA+TGG | + | chr8_4:6194668-6194687 | None:intergenic | 10.0% |
| !! | AAAATAATAATCAAATTCAA+AGG | + | chr8_4:6194720-6194739 | None:intergenic | 10.0% |
| !! | AATGCAAAATTAAAATTATT+AGG | - | chr8_4:6194874-6194893 | Msa1309670:intron | 10.0% |
| !! | ATGCAAAATTAAAATTATTA+GGG | - | chr8_4:6194875-6194894 | Msa1309670:intron | 10.0% |
| !!! | TTATAATTTGAAGTTTAATT+TGG | + | chr8_4:6195423-6195442 | None:intergenic | 10.0% |
| !! | AAAATTCATACATATATATA+TGG | - | chr8_4:6195799-6195818 | Msa1309670:intron | 10.0% |
| !! | AAATTCATACATATATATAT+GGG | - | chr8_4:6195800-6195819 | Msa1309670:intron | 10.0% |
| !! | AATATAAATATATATAACCA+TGG | + | chr8_4:6194668-6194687 | None:intergenic | 10.0% |
| !! | AAAATAATAATCAAATTCAA+AGG | + | chr8_4:6194720-6194739 | None:intergenic | 10.0% |
| !! | AATGCAAAATTAAAATTATT+AGG | - | chr8_4:6194874-6194893 | Msa1309670:intron | 10.0% |
| !! | ATGCAAAATTAAAATTATTA+GGG | - | chr8_4:6194875-6194894 | Msa1309670:intron | 10.0% |
| !!! | TTATAATTTGAAGTTTAATT+TGG | + | chr8_4:6195423-6195442 | None:intergenic | 10.0% |
| !! | AAAATTCATACATATATATA+TGG | - | chr8_4:6195799-6195818 | Msa1309670:intron | 10.0% |
| !! | AAATTCATACATATATATAT+GGG | - | chr8_4:6195800-6195819 | Msa1309670:intron | 10.0% |
| !!! | TTTATTCTTTCATTTTTCAT+TGG | - | chr8_4:6194093-6194112 | Msa1309670:CDS | 15.0% |
| !! | GTAAGAAAACAAAATTATAA+AGG | + | chr8_4:6194752-6194771 | None:intergenic | 15.0% |
| !!! | GCATTTTAATTTCTAATAAA+AGG | + | chr8_4:6194859-6194878 | None:intergenic | 15.0% |
| !!! | AAAGGAATTAATTTTAATTG+TGG | - | chr8_4:6194937-6194956 | Msa1309670:intron | 15.0% |
| !!! | TGATTGAAAATTTGAAATAA+AGG | - | chr8_4:6195142-6195161 | Msa1309670:intron | 15.0% |
| !!! | TTGTTGTTGTTAATTTTTAA+AGG | - | chr8_4:6195265-6195284 | Msa1309670:CDS | 15.0% |
| !!! | TGTTGTTGTTAATTTTTAAA+GGG | - | chr8_4:6195266-6195285 | Msa1309670:CDS | 15.0% |
| !! | ATTAAACTTCAAATTATAAG+AGG | - | chr8_4:6195424-6195443 | Msa1309670:intron | 15.0% |
| !! | CAAATAAGTTTATAGATTAT+TGG | + | chr8_4:6195478-6195497 | None:intergenic | 15.0% |
| !!! | TTTATTCTTTCATTTTTCAT+TGG | - | chr8_4:6194093-6194112 | Msa1309670:CDS | 15.0% |
| !! | GTAAGAAAACAAAATTATAA+AGG | + | chr8_4:6194752-6194771 | None:intergenic | 15.0% |
| !!! | GCATTTTAATTTCTAATAAA+AGG | + | chr8_4:6194859-6194878 | None:intergenic | 15.0% |
| !!! | AAAGGAATTAATTTTAATTG+TGG | - | chr8_4:6194937-6194956 | Msa1309670:intron | 15.0% |
| !!! | TGATTGAAAATTTGAAATAA+AGG | - | chr8_4:6195142-6195161 | Msa1309670:intron | 15.0% |
| !!! | TTGTTGTTGTTAATTTTTAA+AGG | - | chr8_4:6195265-6195284 | Msa1309670:CDS | 15.0% |
| !!! | TGTTGTTGTTAATTTTTAAA+GGG | - | chr8_4:6195266-6195285 | Msa1309670:CDS | 15.0% |
| !! | ATTAAACTTCAAATTATAAG+AGG | - | chr8_4:6195424-6195443 | Msa1309670:intron | 15.0% |
| !! | CAAATAAGTTTATAGATTAT+TGG | + | chr8_4:6195478-6195497 | None:intergenic | 15.0% |
| !! | AAATATTTGAATGAATCTCT+TGG | + | chr8_4:6194263-6194282 | None:intergenic | 20.0% |
| !! | AATTACAGTTGTGAAATTAA+GGG | + | chr8_4:6194454-6194473 | None:intergenic | 20.0% |
| !!! | AAATATGTGATGGATTAATA+AGG | - | chr8_4:6194546-6194565 | Msa1309670:intron | 20.0% |
| !! | TCTATTATTCAAGAAAAAGA+GGG | + | chr8_4:6194575-6194594 | None:intergenic | 20.0% |
| !! | TTCTATTATTCAAGAAAAAG+AGG | + | chr8_4:6194576-6194595 | None:intergenic | 20.0% |
| !! | TCAAGAGAAAATATCATAAT+GGG | + | chr8_4:6195532-6195551 | None:intergenic | 20.0% |
| !! | ATCAAGAGAAAATATCATAA+TGG | + | chr8_4:6195533-6195552 | None:intergenic | 20.0% |
| !!! | TTAGAAGACATATTTTATGA+AGG | - | chr8_4:6195625-6195644 | Msa1309670:intron | 20.0% |
| !!! | AGTTTTTTGTCATTAAAGAT+AGG | + | chr8_4:6196076-6196095 | None:intergenic | 20.0% |
| !! | AAATATTTGAATGAATCTCT+TGG | + | chr8_4:6194263-6194282 | None:intergenic | 20.0% |
| !! | AATTACAGTTGTGAAATTAA+GGG | + | chr8_4:6194454-6194473 | None:intergenic | 20.0% |
| !!! | AAATATGTGATGGATTAATA+AGG | - | chr8_4:6194546-6194565 | Msa1309670:intron | 20.0% |
| !! | TCTATTATTCAAGAAAAAGA+GGG | + | chr8_4:6194575-6194594 | None:intergenic | 20.0% |
| !! | TTCTATTATTCAAGAAAAAG+AGG | + | chr8_4:6194576-6194595 | None:intergenic | 20.0% |
| !! | TCAAGAGAAAATATCATAAT+GGG | + | chr8_4:6195532-6195551 | None:intergenic | 20.0% |
| !! | ATCAAGAGAAAATATCATAA+TGG | + | chr8_4:6195533-6195552 | None:intergenic | 20.0% |
| !!! | TTAGAAGACATATTTTATGA+AGG | - | chr8_4:6195625-6195644 | Msa1309670:intron | 20.0% |
| !!! | AGTTTTTTGTCATTAAAGAT+AGG | + | chr8_4:6196076-6196095 | None:intergenic | 20.0% |
| ! | TAATGTTAGCACAATTGATT+TGG | - | chr8_4:6194209-6194228 | Msa1309670:CDS | 25.0% |
| ! | TGAACCTTTGATATCATTTA+TGG | - | chr8_4:6194293-6194312 | Msa1309670:CDS | 25.0% |
| ! | GAATCCATAAATGATATCAA+AGG | + | chr8_4:6194300-6194319 | None:intergenic | 25.0% |
| ! | GAATTACAGTTGTGAAATTA+AGG | + | chr8_4:6194455-6194474 | None:intergenic | 25.0% |
| ! | TCCCACATTTATATATTAGA+AGG | - | chr8_4:6194499-6194518 | Msa1309670:intron | 25.0% |
| ! | CCCTTCTAATATATAAATGT+GGG | + | chr8_4:6194503-6194522 | None:intergenic | 25.0% |
| ! | CCCACATTTATATATTAGAA+GGG | - | chr8_4:6194500-6194519 | Msa1309670:intron | 25.0% |
| ! | CCACATTTATATATTAGAAG+GGG | - | chr8_4:6194501-6194520 | Msa1309670:intron | 25.0% |
| !!! | TATATATTAGAAGGGGTATT+CGG | - | chr8_4:6194508-6194527 | Msa1309670:intron | 25.0% |
| ! | TTAAGACTCAAAATATGTGA+TGG | - | chr8_4:6194536-6194555 | Msa1309670:intron | 25.0% |
| ! | AATAGAATAAAGTCTTGATC+TGG | - | chr8_4:6194589-6194608 | Msa1309670:intron | 25.0% |
| ! | TTCATCAACTCAGAATTTAA+AGG | - | chr8_4:6194919-6194938 | Msa1309670:intron | 25.0% |
| !! | TTAAAGGGTTATTTCAAAGT+TGG | - | chr8_4:6195281-6195300 | Msa1309670:CDS | 25.0% |
| ! | GATTACTTCAACAAATCTAA+AGG | + | chr8_4:6195314-6195333 | None:intergenic | 25.0% |
| !! | ATATTTTCTCTTGATATCAC+TGG | - | chr8_4:6195538-6195557 | Msa1309670:intron | 25.0% |
| ! | ATATGTTAAAGTACGTAACT+TGG | + | chr8_4:6195579-6195598 | None:intergenic | 25.0% |
| !! | ACACCAACTAATTTTTATGA+AGG | - | chr8_4:6195688-6195707 | Msa1309670:intron | 25.0% |
| ! | ACACCTTCATAAAAATTAGT+TGG | + | chr8_4:6195694-6195713 | None:intergenic | 25.0% |
| ! | GCAAAGTTATAACTAAAAAG+TGG | + | chr8_4:6195886-6195905 | None:intergenic | 25.0% |
| !! | CTAGAAAACAGTTTTTATGA+AGG | + | chr8_4:6195918-6195937 | None:intergenic | 25.0% |
| ! | TAATGTTAGCACAATTGATT+TGG | - | chr8_4:6194209-6194228 | Msa1309670:CDS | 25.0% |
| ! | TGAACCTTTGATATCATTTA+TGG | - | chr8_4:6194293-6194312 | Msa1309670:CDS | 25.0% |
| ! | GAATCCATAAATGATATCAA+AGG | + | chr8_4:6194300-6194319 | None:intergenic | 25.0% |
| ! | GAATTACAGTTGTGAAATTA+AGG | + | chr8_4:6194455-6194474 | None:intergenic | 25.0% |
| ! | TCCCACATTTATATATTAGA+AGG | - | chr8_4:6194499-6194518 | Msa1309670:intron | 25.0% |
| ! | CCCTTCTAATATATAAATGT+GGG | + | chr8_4:6194503-6194522 | None:intergenic | 25.0% |
| ! | CCCACATTTATATATTAGAA+GGG | - | chr8_4:6194500-6194519 | Msa1309670:intron | 25.0% |
| ! | CCACATTTATATATTAGAAG+GGG | - | chr8_4:6194501-6194520 | Msa1309670:intron | 25.0% |
| !!! | TATATATTAGAAGGGGTATT+CGG | - | chr8_4:6194508-6194527 | Msa1309670:intron | 25.0% |
| ! | TTAAGACTCAAAATATGTGA+TGG | - | chr8_4:6194536-6194555 | Msa1309670:intron | 25.0% |
| ! | AATAGAATAAAGTCTTGATC+TGG | - | chr8_4:6194589-6194608 | Msa1309670:intron | 25.0% |
| ! | TTCATCAACTCAGAATTTAA+AGG | - | chr8_4:6194919-6194938 | Msa1309670:intron | 25.0% |
| !! | TTAAAGGGTTATTTCAAAGT+TGG | - | chr8_4:6195281-6195300 | Msa1309670:CDS | 25.0% |
| ! | GATTACTTCAACAAATCTAA+AGG | + | chr8_4:6195314-6195333 | None:intergenic | 25.0% |
| !! | ATATTTTCTCTTGATATCAC+TGG | - | chr8_4:6195538-6195557 | Msa1309670:intron | 25.0% |
| ! | ATATGTTAAAGTACGTAACT+TGG | + | chr8_4:6195579-6195598 | None:intergenic | 25.0% |
| !! | ACACCAACTAATTTTTATGA+AGG | - | chr8_4:6195688-6195707 | Msa1309670:intron | 25.0% |
| ! | ACACCTTCATAAAAATTAGT+TGG | + | chr8_4:6195694-6195713 | None:intergenic | 25.0% |
| ! | GCAAAGTTATAACTAAAAAG+TGG | + | chr8_4:6195886-6195905 | None:intergenic | 25.0% |
| !! | CTAGAAAACAGTTTTTATGA+AGG | + | chr8_4:6195918-6195937 | None:intergenic | 25.0% |
| !!! | TCATTTTTCATTGGTGCTAA+TGG | - | chr8_4:6194102-6194121 | Msa1309670:CDS | 30.0% |
| ! | TTTTCCATAGCAACAGATAA+GGG | + | chr8_4:6194375-6194394 | None:intergenic | 30.0% |
| ! | CTGCAACAGAAATTTTCTTA+GGG | + | chr8_4:6194401-6194420 | None:intergenic | 30.0% |
| ! | ACTGCAACAGAAATTTTCTT+AGG | + | chr8_4:6194402-6194421 | None:intergenic | 30.0% |
| TTTCACAACTGTAATTCAAG+AGG | - | chr8_4:6194458-6194477 | Msa1309670:intron | 30.0% | |
| CCCCTTCTAATATATAAATG+TGG | + | chr8_4:6194504-6194523 | None:intergenic | 30.0% | |
| ATGGTTACTAACATCTGAAA+TGG | + | chr8_4:6194649-6194668 | None:intergenic | 30.0% | |
| ATTTCAGATGTTAGTAACCA+TGG | - | chr8_4:6194648-6194667 | Msa1309670:intron | 30.0% | |
| TTTAAGAACAATAACTGTGG+TGG | + | chr8_4:6195023-6195042 | None:intergenic | 30.0% | |
| CCATTTAAGAACAATAACTG+TGG | + | chr8_4:6195026-6195045 | None:intergenic | 30.0% | |
| CCACAGTTATTGTTCTTAAA+TGG | - | chr8_4:6195023-6195042 | Msa1309670:intron | 30.0% | |
| GCAAAAAAGTTTACCTCATT+AGG | + | chr8_4:6195119-6195138 | None:intergenic | 30.0% | |
| TCTTAACCTCCTCATTTATA+GGG | + | chr8_4:6195455-6195474 | None:intergenic | 30.0% | |
| TTGCTAAAAGACACTTTCAT+CGG | - | chr8_4:6195765-6195784 | Msa1309670:intron | 30.0% | |
| ! | ATATTGATTGTAACATGCGT+AGG | - | chr8_4:6196015-6196034 | Msa1309670:CDS | 30.0% |
| TTGTCATTAAAGATAGGATG+TGG | + | chr8_4:6196070-6196089 | None:intergenic | 30.0% | |
| !! | TTGCTGATAATGAAGACTTT+TGG | + | chr8_4:6196145-6196164 | None:intergenic | 30.0% |
| AAAGTCTTCATTATCAGCAA+AGG | - | chr8_4:6196145-6196164 | Msa1309670:CDS | 30.0% | |
| TTATGGATAATTGAGAGAAC+TGG | - | chr8_4:6196196-6196215 | Msa1309670:CDS | 30.0% | |
| !!! | TCATTTTTCATTGGTGCTAA+TGG | - | chr8_4:6194102-6194121 | Msa1309670:CDS | 30.0% |
| ! | TTTTCCATAGCAACAGATAA+GGG | + | chr8_4:6194375-6194394 | None:intergenic | 30.0% |
| ! | CTGCAACAGAAATTTTCTTA+GGG | + | chr8_4:6194401-6194420 | None:intergenic | 30.0% |
| ! | ACTGCAACAGAAATTTTCTT+AGG | + | chr8_4:6194402-6194421 | None:intergenic | 30.0% |
| TTTCACAACTGTAATTCAAG+AGG | - | chr8_4:6194458-6194477 | Msa1309670:intron | 30.0% | |
| CCCCTTCTAATATATAAATG+TGG | + | chr8_4:6194504-6194523 | None:intergenic | 30.0% | |
| ATGGTTACTAACATCTGAAA+TGG | + | chr8_4:6194649-6194668 | None:intergenic | 30.0% | |
| ATTTCAGATGTTAGTAACCA+TGG | - | chr8_4:6194648-6194667 | Msa1309670:intron | 30.0% | |
| TTTAAGAACAATAACTGTGG+TGG | + | chr8_4:6195023-6195042 | None:intergenic | 30.0% | |
| CCATTTAAGAACAATAACTG+TGG | + | chr8_4:6195026-6195045 | None:intergenic | 30.0% | |
| CCACAGTTATTGTTCTTAAA+TGG | - | chr8_4:6195023-6195042 | Msa1309670:intron | 30.0% | |
| GCAAAAAAGTTTACCTCATT+AGG | + | chr8_4:6195119-6195138 | None:intergenic | 30.0% | |
| TCTTAACCTCCTCATTTATA+GGG | + | chr8_4:6195455-6195474 | None:intergenic | 30.0% | |
| TTGCTAAAAGACACTTTCAT+CGG | - | chr8_4:6195765-6195784 | Msa1309670:intron | 30.0% | |
| ! | ATATTGATTGTAACATGCGT+AGG | - | chr8_4:6196015-6196034 | Msa1309670:CDS | 30.0% |
| TTGTCATTAAAGATAGGATG+TGG | + | chr8_4:6196070-6196089 | None:intergenic | 30.0% | |
| !! | TTGCTGATAATGAAGACTTT+TGG | + | chr8_4:6196145-6196164 | None:intergenic | 30.0% |
| AAAGTCTTCATTATCAGCAA+AGG | - | chr8_4:6196145-6196164 | Msa1309670:CDS | 30.0% | |
| TTATGGATAATTGAGAGAAC+TGG | - | chr8_4:6196196-6196215 | Msa1309670:CDS | 30.0% | |
| TTCAGGTATCAATCCAATAC+AGG | - | chr8_4:6194236-6194255 | Msa1309670:CDS | 35.0% | |
| ! | ACAAGAATCACCTTTTCCTT+TGG | + | chr8_4:6194330-6194349 | None:intergenic | 35.0% |
| AAAGGAAAAGGTGATTCTTG+TGG | - | chr8_4:6194329-6194348 | Msa1309670:intron | 35.0% | |
| AAGGAAAAGGTGATTCTTGT+GGG | - | chr8_4:6194330-6194349 | Msa1309670:intron | 35.0% | |
| ! | ATTCTTGTGGGTCATAGTTT+TGG | - | chr8_4:6194342-6194361 | Msa1309670:intron | 35.0% |
| ! | CTTTTCCATAGCAACAGATA+AGG | + | chr8_4:6194376-6194395 | None:intergenic | 35.0% |
| AGAATAAAGTCTTGATCTGG+TGG | - | chr8_4:6194592-6194611 | Msa1309670:intron | 35.0% | |
| AGTTCTTCTCTCATTCTATG+AGG | + | chr8_4:6194991-6195010 | None:intergenic | 35.0% | |
| GTATCAATTATCGCCTAATG+AGG | - | chr8_4:6195103-6195122 | Msa1309670:intron | 35.0% | |
| GTCTTAACCTCCTCATTTAT+AGG | + | chr8_4:6195456-6195475 | None:intergenic | 35.0% | |
| !! | CGTAACTTGGTGTATACATT+TGG | + | chr8_4:6195566-6195585 | None:intergenic | 35.0% |
| AAAGTGAAAATCACACCTTG+AGG | - | chr8_4:6195736-6195755 | Msa1309670:intron | 35.0% | |
| AAAGTGGAAATCACACCTTA+AGG | + | chr8_4:6195870-6195889 | None:intergenic | 35.0% | |
| TTTGACACTTGGATCATCAT+TGG | - | chr8_4:6196039-6196058 | Msa1309670:CDS | 35.0% | |
| AAACAAGAGTTACCAAGCAA+AGG | - | chr8_4:6196107-6196126 | Msa1309670:CDS | 35.0% | |
| AGGAGACAATATCATTAGAG+AGG | - | chr8_4:6196165-6196184 | Msa1309670:CDS | 35.0% | |
| TTAGAGAGGATATGCAGTTA+TGG | - | chr8_4:6196179-6196198 | Msa1309670:CDS | 35.0% | |
| GATAAAGGGTTCAGATCATA+TGG | - | chr8_4:6196240-6196259 | Msa1309670:CDS | 35.0% | |
| !!! | AGAGGTGAGTTTTTTAGGTT+TGG | + | chr8_4:6196275-6196294 | None:intergenic | 35.0% |
| !!! | ATGTGAGAGGTGAGTTTTTT+AGG | + | chr8_4:6196280-6196299 | None:intergenic | 35.0% |
| AGCAATCTTTAGTATGTGAG+AGG | + | chr8_4:6196293-6196312 | None:intergenic | 35.0% | |
| TTCAGGTATCAATCCAATAC+AGG | - | chr8_4:6194236-6194255 | Msa1309670:CDS | 35.0% | |
| ! | ACAAGAATCACCTTTTCCTT+TGG | + | chr8_4:6194330-6194349 | None:intergenic | 35.0% |
| AAAGGAAAAGGTGATTCTTG+TGG | - | chr8_4:6194329-6194348 | Msa1309670:intron | 35.0% | |
| AAGGAAAAGGTGATTCTTGT+GGG | - | chr8_4:6194330-6194349 | Msa1309670:intron | 35.0% | |
| ! | ATTCTTGTGGGTCATAGTTT+TGG | - | chr8_4:6194342-6194361 | Msa1309670:intron | 35.0% |
| ! | CTTTTCCATAGCAACAGATA+AGG | + | chr8_4:6194376-6194395 | None:intergenic | 35.0% |
| AGAATAAAGTCTTGATCTGG+TGG | - | chr8_4:6194592-6194611 | Msa1309670:intron | 35.0% | |
| AGTTCTTCTCTCATTCTATG+AGG | + | chr8_4:6194991-6195010 | None:intergenic | 35.0% | |
| GTATCAATTATCGCCTAATG+AGG | - | chr8_4:6195103-6195122 | Msa1309670:intron | 35.0% | |
| GTCTTAACCTCCTCATTTAT+AGG | + | chr8_4:6195456-6195475 | None:intergenic | 35.0% | |
| !! | CGTAACTTGGTGTATACATT+TGG | + | chr8_4:6195566-6195585 | None:intergenic | 35.0% |
| AAAGTGAAAATCACACCTTG+AGG | - | chr8_4:6195736-6195755 | Msa1309670:intron | 35.0% | |
| AAAGTGGAAATCACACCTTA+AGG | + | chr8_4:6195870-6195889 | None:intergenic | 35.0% | |
| TTTGACACTTGGATCATCAT+TGG | - | chr8_4:6196039-6196058 | Msa1309670:CDS | 35.0% | |
| AAACAAGAGTTACCAAGCAA+AGG | - | chr8_4:6196107-6196126 | Msa1309670:CDS | 35.0% | |
| AGGAGACAATATCATTAGAG+AGG | - | chr8_4:6196165-6196184 | Msa1309670:CDS | 35.0% | |
| TTAGAGAGGATATGCAGTTA+TGG | - | chr8_4:6196179-6196198 | Msa1309670:CDS | 35.0% | |
| GATAAAGGGTTCAGATCATA+TGG | - | chr8_4:6196240-6196259 | Msa1309670:CDS | 35.0% | |
| !!! | AGAGGTGAGTTTTTTAGGTT+TGG | + | chr8_4:6196275-6196294 | None:intergenic | 35.0% |
| !!! | ATGTGAGAGGTGAGTTTTTT+AGG | + | chr8_4:6196280-6196299 | None:intergenic | 35.0% |
| AGCAATCTTTAGTATGTGAG+AGG | + | chr8_4:6196293-6196312 | None:intergenic | 35.0% | |
| AAGCACTTTGTGCTTGTTCA+TGG | - | chr8_4:6194126-6194145 | Msa1309670:CDS | 40.0% | |
| GCAACTATGCTTAAATCAGC+TGG | - | chr8_4:6194183-6194202 | Msa1309670:CDS | 40.0% | |
| !! | ACAATTGATTTGGCTGCTTC+AGG | - | chr8_4:6194219-6194238 | Msa1309670:CDS | 40.0% |
| TGAATCTCTTGGACCTGTAT+TGG | + | chr8_4:6194252-6194271 | None:intergenic | 40.0% | |
| TATGGATTCTCTTCCTCCAA+AGG | - | chr8_4:6194311-6194330 | Msa1309670:CDS | 40.0% | |
| TTCTCTTCCTCCAAAGGAAA+AGG | - | chr8_4:6194317-6194336 | Msa1309670:CDS | 40.0% | |
| ! | AGAATCACCTTTTCCTTTGG+AGG | + | chr8_4:6194327-6194346 | None:intergenic | 40.0% |
| !!! | TTGTGGGTCATAGTTTTGGA+GGG | - | chr8_4:6194346-6194365 | Msa1309670:intron | 40.0% |
| GATACCCTTATCTGTTGCTA+TGG | - | chr8_4:6194368-6194387 | Msa1309670:intron | 40.0% | |
| GAGTTTGGATCCAAACAACA+AGG | + | chr8_4:6195069-6195088 | None:intergenic | 40.0% | |
| GTTGTTTGGATCCAAACTCT+TGG | - | chr8_4:6195070-6195089 | Msa1309670:intron | 40.0% | |
| GAGGACTTTCCCTATAAATG+AGG | - | chr8_4:6195443-6195462 | Msa1309670:intron | 40.0% | |
| GACTTTCCCTATAAATGAGG+AGG | - | chr8_4:6195446-6195465 | Msa1309670:intron | 40.0% | |
| ! | TTTTAGCAATCCACACCTCA+AGG | + | chr8_4:6195754-6195773 | None:intergenic | 40.0% |
| CTAAAAGACACTTTCATCGG+TGG | - | chr8_4:6195768-6195787 | Msa1309670:intron | 40.0% | |
| CTAAAAGACACCTTCATGGA+TGG | + | chr8_4:6195838-6195857 | None:intergenic | 40.0% | |
| GTTGCTAAAAGACACCTTCA+TGG | + | chr8_4:6195842-6195861 | None:intergenic | 40.0% | |
| ! | TTTTAGCAACCCACACCTTA+AGG | - | chr8_4:6195852-6195871 | Msa1309670:intron | 40.0% |
| GAAATCACACCTTAAGGTGT+GGG | + | chr8_4:6195864-6195883 | None:intergenic | 40.0% | |
| AGAGTTACCAAGCAAAGGAA+TGG | - | chr8_4:6196112-6196131 | Msa1309670:CDS | 40.0% | |
| TACTCTTCCATTCCTTTGCT+TGG | + | chr8_4:6196122-6196141 | None:intergenic | 40.0% | |
| ATCACTTTCACCTCAGCATA+AGG | + | chr8_4:6196223-6196242 | None:intergenic | 40.0% | |
| TGCTGAGGTGAAAGTGATAA+AGG | - | chr8_4:6196225-6196244 | Msa1309670:CDS | 40.0% | |
| GCTGAGGTGAAAGTGATAAA+GGG | - | chr8_4:6196226-6196245 | Msa1309670:CDS | 40.0% | |
| AAGCACTTTGTGCTTGTTCA+TGG | - | chr8_4:6194126-6194145 | Msa1309670:CDS | 40.0% | |
| GCAACTATGCTTAAATCAGC+TGG | - | chr8_4:6194183-6194202 | Msa1309670:CDS | 40.0% | |
| !! | ACAATTGATTTGGCTGCTTC+AGG | - | chr8_4:6194219-6194238 | Msa1309670:CDS | 40.0% |
| TGAATCTCTTGGACCTGTAT+TGG | + | chr8_4:6194252-6194271 | None:intergenic | 40.0% | |
| TATGGATTCTCTTCCTCCAA+AGG | - | chr8_4:6194311-6194330 | Msa1309670:CDS | 40.0% | |
| TTCTCTTCCTCCAAAGGAAA+AGG | - | chr8_4:6194317-6194336 | Msa1309670:CDS | 40.0% | |
| ! | AGAATCACCTTTTCCTTTGG+AGG | + | chr8_4:6194327-6194346 | None:intergenic | 40.0% |
| !!! | TTGTGGGTCATAGTTTTGGA+GGG | - | chr8_4:6194346-6194365 | Msa1309670:intron | 40.0% |
| GATACCCTTATCTGTTGCTA+TGG | - | chr8_4:6194368-6194387 | Msa1309670:intron | 40.0% | |
| GAGTTTGGATCCAAACAACA+AGG | + | chr8_4:6195069-6195088 | None:intergenic | 40.0% | |
| GTTGTTTGGATCCAAACTCT+TGG | - | chr8_4:6195070-6195089 | Msa1309670:intron | 40.0% | |
| GAGGACTTTCCCTATAAATG+AGG | - | chr8_4:6195443-6195462 | Msa1309670:intron | 40.0% | |
| GACTTTCCCTATAAATGAGG+AGG | - | chr8_4:6195446-6195465 | Msa1309670:intron | 40.0% | |
| ! | TTTTAGCAATCCACACCTCA+AGG | + | chr8_4:6195754-6195773 | None:intergenic | 40.0% |
| CTAAAAGACACTTTCATCGG+TGG | - | chr8_4:6195768-6195787 | Msa1309670:intron | 40.0% | |
| CTAAAAGACACCTTCATGGA+TGG | + | chr8_4:6195838-6195857 | None:intergenic | 40.0% | |
| GTTGCTAAAAGACACCTTCA+TGG | + | chr8_4:6195842-6195861 | None:intergenic | 40.0% | |
| ! | TTTTAGCAACCCACACCTTA+AGG | - | chr8_4:6195852-6195871 | Msa1309670:intron | 40.0% |
| GAAATCACACCTTAAGGTGT+GGG | + | chr8_4:6195864-6195883 | None:intergenic | 40.0% | |
| AGAGTTACCAAGCAAAGGAA+TGG | - | chr8_4:6196112-6196131 | Msa1309670:CDS | 40.0% | |
| TACTCTTCCATTCCTTTGCT+TGG | + | chr8_4:6196122-6196141 | None:intergenic | 40.0% | |
| ATCACTTTCACCTCAGCATA+AGG | + | chr8_4:6196223-6196242 | None:intergenic | 40.0% | |
| TGCTGAGGTGAAAGTGATAA+AGG | - | chr8_4:6196225-6196244 | Msa1309670:CDS | 40.0% | |
| GCTGAGGTGAAAGTGATAAA+GGG | - | chr8_4:6196226-6196245 | Msa1309670:CDS | 40.0% | |
| TCAACACAACGTGTCTTTCC+CGG | + | chr8_4:6194062-6194081 | None:intergenic | 45.0% | |
| TTTGTGCTTGTTCATGGAGC+TGG | - | chr8_4:6194132-6194151 | Msa1309670:CDS | 45.0% | |
| TATACCAACACCATGCACCA+TGG | + | chr8_4:6194158-6194177 | None:intergenic | 45.0% | |
| !! | TGGTGCATGGTGTTGGTATA+AGG | - | chr8_4:6194158-6194177 | Msa1309670:CDS | 45.0% |
| !!! | CTTGTGGGTCATAGTTTTGG+AGG | - | chr8_4:6194345-6194364 | Msa1309670:intron | 45.0% |
| GATCCAAACAACAAGGCAGT+TGG | + | chr8_4:6195062-6195081 | None:intergenic | 45.0% | |
| CAGATGAGATGCCAAGAGTT+TGG | + | chr8_4:6195084-6195103 | None:intergenic | 45.0% | |
| GAAAATCACACCTTGAGGTG+TGG | - | chr8_4:6195741-6195760 | Msa1309670:intron | 45.0% | |
| TTGCTAGAAGCCATCCATGA+AGG | - | chr8_4:6195825-6195844 | Msa1309670:intron | 45.0% | |
| GGAAATCACACCTTAAGGTG+TGG | + | chr8_4:6195865-6195884 | None:intergenic | 45.0% | |
| CATGCGTAGGATTTGACACT+TGG | - | chr8_4:6196028-6196047 | Msa1309670:CDS | 45.0% | |
| CACTTGGATCATCATTGGTG+AGG | - | chr8_4:6196044-6196063 | Msa1309670:CDS | 45.0% | |
| TCAACACAACGTGTCTTTCC+CGG | + | chr8_4:6194062-6194081 | None:intergenic | 45.0% | |
| TTTGTGCTTGTTCATGGAGC+TGG | - | chr8_4:6194132-6194151 | Msa1309670:CDS | 45.0% | |
| TATACCAACACCATGCACCA+TGG | + | chr8_4:6194158-6194177 | None:intergenic | 45.0% | |
| !! | TGGTGCATGGTGTTGGTATA+AGG | - | chr8_4:6194158-6194177 | Msa1309670:CDS | 45.0% |
| !!! | CTTGTGGGTCATAGTTTTGG+AGG | - | chr8_4:6194345-6194364 | Msa1309670:intron | 45.0% |
| GATCCAAACAACAAGGCAGT+TGG | + | chr8_4:6195062-6195081 | None:intergenic | 45.0% | |
| CAGATGAGATGCCAAGAGTT+TGG | + | chr8_4:6195084-6195103 | None:intergenic | 45.0% | |
| GAAAATCACACCTTGAGGTG+TGG | - | chr8_4:6195741-6195760 | Msa1309670:intron | 45.0% | |
| TTGCTAGAAGCCATCCATGA+AGG | - | chr8_4:6195825-6195844 | Msa1309670:intron | 45.0% | |
| GGAAATCACACCTTAAGGTG+TGG | + | chr8_4:6195865-6195884 | None:intergenic | 45.0% | |
| CATGCGTAGGATTTGACACT+TGG | - | chr8_4:6196028-6196047 | Msa1309670:CDS | 45.0% | |
| CACTTGGATCATCATTGGTG+AGG | - | chr8_4:6196044-6196063 | Msa1309670:CDS | 45.0% | |
| AAGGCAGTTGGAGGACTGTT+TGG | + | chr8_4:6195050-6195069 | None:intergenic | 50.0% | |
| CCAAACAACAAGGCAGTTGG+AGG | + | chr8_4:6195059-6195078 | None:intergenic | 50.0% | |
| !! | CCTCCAACTGCCTTGTTGTT+TGG | - | chr8_4:6195056-6195075 | Msa1309670:intron | 50.0% |
| GAGAACTGGTCCTTATGCTG+AGG | - | chr8_4:6196210-6196229 | Msa1309670:CDS | 50.0% | |
| AAGGCAGTTGGAGGACTGTT+TGG | + | chr8_4:6195050-6195069 | None:intergenic | 50.0% | |
| CCAAACAACAAGGCAGTTGG+AGG | + | chr8_4:6195059-6195078 | None:intergenic | 50.0% | |
| !! | CCTCCAACTGCCTTGTTGTT+TGG | - | chr8_4:6195056-6195075 | Msa1309670:intron | 50.0% |
| GAGAACTGGTCCTTATGCTG+AGG | - | chr8_4:6196210-6196229 | Msa1309670:CDS | 50.0% | |
| CTTGTTCATGGAGCTGGCCA+TGG | - | chr8_4:6194138-6194157 | Msa1309670:CDS | 55.0% | |
| CTTGTTCATGGAGCTGGCCA+TGG | - | chr8_4:6194138-6194157 | Msa1309670:CDS | 55.0% | |
| ATGGAGCTGGCCATGGTGCA+TGG | - | chr8_4:6194145-6194164 | Msa1309670:CDS | 60.0% | |
| CTGGCCATGGTGCATGGTGT+TGG | - | chr8_4:6194151-6194170 | Msa1309670:CDS | 60.0% | |
| ATGGAGCTGGCCATGGTGCA+TGG | - | chr8_4:6194145-6194164 | Msa1309670:CDS | 60.0% | |
| CTGGCCATGGTGCATGGTGT+TGG | - | chr8_4:6194151-6194170 | Msa1309670:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 6194051 | 6196324 | 6194051 | ID=Msa1309670;Name=Msa1309670 |
| chr8_4 | mRNA | 6194051 | 6196324 | 6194051 | ID=Msa1309670-mRNA-1;Parent=Msa1309670;Name=Msa1309670-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|3|0|281 |
| chr8_4 | exon | 6195896 | 6196324 | 6195896 | ID=Msa1309670-mRNA-1:exon:2134;Parent=Msa1309670-mRNA-1 |
| chr8_4 | exon | 6195251 | 6195379 | 6195251 | ID=Msa1309670-mRNA-1:exon:2133;Parent=Msa1309670-mRNA-1 |
| chr8_4 | exon | 6194051 | 6194338 | 6194051 | ID=Msa1309670-mRNA-1:exon:2132;Parent=Msa1309670-mRNA-1 |
| chr8_4 | CDS | 6195896 | 6196324 | 6195896 | ID=Msa1309670-mRNA-1:cds;Parent=Msa1309670-mRNA-1 |
| chr8_4 | CDS | 6195251 | 6195379 | 6195251 | ID=Msa1309670-mRNA-1:cds;Parent=Msa1309670-mRNA-1 |
| chr8_4 | CDS | 6194051 | 6194338 | 6194051 | ID=Msa1309670-mRNA-1:cds;Parent=Msa1309670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
