Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0539260 | PNY17407.1 | 84.891 | 642 | 41 | 5 | 14 | 628 | 3 | 615 | 0.0 | 1092 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0539260 | sp|Q9XI23|BOR4_ARATH | 68.024 | 663 | 177 | 5 | 8 | 636 | 10 | 671 | 0.0 | 929 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0539260 | A0A2K3PQ58 | 84.891 | 642 | 41 | 5 | 14 | 628 | 3 | 615 | 0.0 | 1092 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002690 | Msa0539260 | -0.808206 | 3.470433e-50 | -8.615850e-47 |
| Msa0002700 | Msa0539260 | -0.804193 | 2.430053e-49 | -8.615850e-47 |
| Msa0004180 | Msa0539260 | -0.810739 | 9.921346e-51 | -8.615850e-47 |
| Msa0011010 | Msa0539260 | 0.821372 | 4.181371e-53 | -8.615850e-47 |
| Msa0011040 | Msa0539260 | 0.821142 | 4.725720e-53 | -8.615850e-47 |
| Msa0016830 | Msa0539260 | -0.802439 | 5.607891e-49 | -8.615850e-47 |
| Msa0021570 | Msa0539260 | -0.802109 | 6.555863e-49 | -8.615850e-47 |
| Msa0021870 | Msa0539260 | 0.802136 | 6.472435e-49 | -8.615850e-47 |
| Msa0028940 | Msa0539260 | -0.813537 | 2.433929e-51 | -8.615850e-47 |
| Msa0031650 | Msa0539260 | 0.805835 | 1.101670e-49 | -8.615850e-47 |
| Msa0033190 | Msa0539260 | -0.807805 | 4.223417e-50 | -8.615850e-47 |
| Msa0048380 | Msa0539260 | 0.826705 | 2.342561e-54 | -8.615850e-47 |
| Msa0069590 | Msa0539260 | -0.802005 | 6.887455e-49 | -8.615850e-47 |
| Msa0073110 | Msa0539260 | 0.805672 | 1.192434e-49 | -8.615850e-47 |
| Msa0077990 | Msa0539260 | -0.804251 | 2.362712e-49 | -8.615850e-47 |
| Msa0079840 | Msa0539260 | -0.808152 | 3.564251e-50 | -8.615850e-47 |
| Msa0080100 | Msa0539260 | -0.811589 | 6.490434e-51 | -8.615850e-47 |
| Msa0087900 | Msa0539260 | 0.825767 | 3.916442e-54 | -8.615850e-47 |
| Msa0093530 | Msa0539260 | 0.811468 | 6.897835e-51 | -8.615850e-47 |
| Msa0098380 | Msa0539260 | 0.819417 | 1.174551e-52 | -8.615850e-47 |
| Msa0105140 | Msa0539260 | -0.803724 | 3.040213e-49 | -8.615850e-47 |
| Msa0106540 | Msa0539260 | 0.802302 | 5.984285e-49 | -8.615850e-47 |
| Msa0107830 | Msa0539260 | 0.819245 | 1.285165e-52 | -8.615850e-47 |
| Msa0116780 | Msa0539260 | -0.806328 | 8.678999e-50 | -8.615850e-47 |
| Msa0120450 | Msa0539260 | 0.801811 | 7.549292e-49 | -8.615850e-47 |
| Msa0124460 | Msa0539260 | -0.816087 | 6.624097e-52 | -8.615850e-47 |
| Msa0126960 | Msa0539260 | 0.810032 | 1.410434e-50 | -8.615850e-47 |
| Msa0127110 | Msa0539260 | -0.815076 | 1.112414e-51 | -8.615850e-47 |
| Msa0132250 | Msa0539260 | 0.808328 | 3.269293e-50 | -8.615850e-47 |
| Msa0144000 | Msa0539260 | 0.805395 | 1.363001e-49 | -8.615850e-47 |
| Msa0163690 | Msa0539260 | 0.803535 | 3.327531e-49 | -8.615850e-47 |
| Msa0168470 | Msa0539260 | -0.801545 | 8.561296e-49 | -8.615850e-47 |
| Msa0168950 | Msa0539260 | -0.816538 | 5.252292e-52 | -8.615850e-47 |
| Msa0171740 | Msa0539260 | 0.812109 | 5.000599e-51 | -8.615850e-47 |
| Msa0185040 | Msa0539260 | 0.800316 | 1.526294e-48 | -8.615850e-47 |
| Msa0189150 | Msa0539260 | -0.802438 | 5.611320e-49 | -8.615850e-47 |
| Msa0211460 | Msa0539260 | 0.815975 | 7.017635e-52 | -8.615850e-47 |
| Msa0212950 | Msa0539260 | -0.810258 | 1.260716e-50 | -8.615850e-47 |
| Msa0219720 | Msa0539260 | -0.804155 | 2.474127e-49 | -8.615850e-47 |
| Msa0224870 | Msa0539260 | 0.814091 | 1.838064e-51 | -8.615850e-47 |
| Msa0225280 | Msa0539260 | -0.800831 | 1.198451e-48 | -8.615850e-47 |
| Msa0234150 | Msa0539260 | 0.801568 | 8.467626e-49 | -8.615850e-47 |
| Msa0238460 | Msa0539260 | -0.800786 | 1.224128e-48 | -8.615850e-47 |
| Msa0369080 | Msa0539260 | -0.813035 | 3.138224e-51 | -8.615850e-47 |
| Msa0380470 | Msa0539260 | -0.801125 | 1.043676e-48 | -8.615850e-47 |
| Msa0386230 | Msa0539260 | -0.805009 | 1.641219e-49 | -8.615850e-47 |
| Msa0390200 | Msa0539260 | 0.813471 | 2.517271e-51 | -8.615850e-47 |
| Msa0413050 | Msa0539260 | -0.812726 | 3.666331e-51 | -8.615850e-47 |
| Msa0414480 | Msa0539260 | 0.842983 | 1.853099e-58 | -8.615850e-47 |
| Msa0416430 | Msa0539260 | -0.810443 | 1.149914e-50 | -8.615850e-47 |
| Msa0427230 | Msa0539260 | -0.805353 | 1.390614e-49 | -8.615850e-47 |
| Msa0428720 | Msa0539260 | -0.809198 | 2.130505e-50 | -8.615850e-47 |
| Msa0433090 | Msa0539260 | 0.806436 | 8.233831e-50 | -8.615850e-47 |
| Msa0436660 | Msa0539260 | -0.813349 | 2.676931e-51 | -8.615850e-47 |
| Msa0454770 | Msa0539260 | 0.805282 | 1.439526e-49 | -8.615850e-47 |
| Msa0463030 | Msa0539260 | -0.801872 | 7.335987e-49 | -8.615850e-47 |
| Msa0464310 | Msa0539260 | 0.840327 | 9.296305e-58 | -8.615850e-47 |
| Msa0469770 | Msa0539260 | -0.807358 | 5.256373e-50 | -8.615850e-47 |
| Msa0473740 | Msa0539260 | -0.805920 | 1.057584e-49 | -8.615850e-47 |
| Msa0474660 | Msa0539260 | -0.812718 | 3.681558e-51 | -8.615850e-47 |
| Msa0475080 | Msa0539260 | -0.800471 | 1.419193e-48 | -8.615850e-47 |
| Msa0244310 | Msa0539260 | 0.807065 | 6.063501e-50 | -8.615850e-47 |
| Msa0253230 | Msa0539260 | -0.818583 | 1.816936e-52 | -8.615850e-47 |
| Msa0261020 | Msa0539260 | -0.827958 | 1.173330e-54 | -8.615850e-47 |
| Msa0261350 | Msa0539260 | -0.806667 | 7.360589e-50 | -8.615850e-47 |
| Msa0266330 | Msa0539260 | -0.800951 | 1.132819e-48 | -8.615850e-47 |
| Msa0267700 | Msa0539260 | 0.815440 | 9.233370e-52 | -8.615850e-47 |
| Msa0269610 | Msa0539260 | -0.804418 | 2.181195e-49 | -8.615850e-47 |
| Msa0269710 | Msa0539260 | 0.800802 | 1.214982e-48 | -8.615850e-47 |
| Msa0270730 | Msa0539260 | -0.812488 | 4.133268e-51 | -8.615850e-47 |
| Msa0271700 | Msa0539260 | 0.806644 | 7.441646e-50 | -8.615850e-47 |
| Msa0275730 | Msa0539260 | 0.809729 | 1.638715e-50 | -8.615850e-47 |
| Msa0278940 | Msa0539260 | 0.806144 | 9.487444e-50 | -8.615850e-47 |
| Msa0279810 | Msa0539260 | 0.827769 | 1.302731e-54 | -8.615850e-47 |
| Msa0299130 | Msa0539260 | -0.810701 | 1.011241e-50 | -8.615850e-47 |
| Msa0307630 | Msa0539260 | 0.810863 | 9.327305e-51 | -8.615850e-47 |
| Msa0316080 | Msa0539260 | -0.808390 | 3.171298e-50 | -8.615850e-47 |
| Msa0317820 | Msa0539260 | -0.812064 | 5.115037e-51 | -8.615850e-47 |
| Msa0319220 | Msa0539260 | 0.834648 | 2.653908e-56 | -8.615850e-47 |
| Msa0333770 | Msa0539260 | 0.813905 | 2.019725e-51 | -8.615850e-47 |
| Msa0336550 | Msa0539260 | -0.813265 | 2.793424e-51 | -8.615850e-47 |
| Msa0340700 | Msa0539260 | -0.808290 | 3.331086e-50 | -8.615850e-47 |
| Msa0341950 | Msa0539260 | -0.802145 | 6.446240e-49 | -8.615850e-47 |
| Msa0346170 | Msa0539260 | 0.810918 | 9.074375e-51 | -8.615850e-47 |
| Msa0356320 | Msa0539260 | 0.801185 | 1.014271e-48 | -8.615850e-47 |
| Msa0483410 | Msa0539260 | -0.800367 | 1.489804e-48 | -8.615850e-47 |
| Msa0497680 | Msa0539260 | 0.801840 | 7.446855e-49 | -8.615850e-47 |
| Msa0506700 | Msa0539260 | -0.804844 | 1.776940e-49 | -8.615850e-47 |
| Msa0507960 | Msa0539260 | -0.803392 | 3.562667e-49 | -8.615850e-47 |
| Msa0508620 | Msa0539260 | -0.811378 | 7.213342e-51 | -8.615850e-47 |
| Msa0508660 | Msa0539260 | -0.808355 | 3.225857e-50 | -8.615850e-47 |
| Msa0510870 | Msa0539260 | 0.804455 | 2.143025e-49 | -8.615850e-47 |
| Msa0517820 | Msa0539260 | -0.804183 | 2.440631e-49 | -8.615850e-47 |
| Msa0524710 | Msa0539260 | 0.820519 | 6.572789e-53 | -8.615850e-47 |
| Msa0530220 | Msa0539260 | -0.811377 | 7.216289e-51 | -8.615850e-47 |
| Msa0530250 | Msa0539260 | -0.805467 | 1.316339e-49 | -8.615850e-47 |
| Msa0531040 | Msa0539260 | 0.809820 | 1.566054e-50 | -8.615850e-47 |
| Msa0531050 | Msa0539260 | 0.816956 | 4.233436e-52 | -8.615850e-47 |
| Msa0535570 | Msa0539260 | 0.811035 | 8.562375e-51 | -8.615850e-47 |
| Msa0538440 | Msa0539260 | 0.825680 | 4.107284e-54 | -8.615850e-47 |
| Msa0538530 | Msa0539260 | 0.810563 | 1.083351e-50 | -8.615850e-47 |
| Msa0539260 | Msa0540640 | 0.823309 | 1.485054e-53 | -8.615850e-47 |
| Msa0539260 | Msa0545680 | 0.808087 | 3.680044e-50 | -8.615850e-47 |
| Msa0539260 | Msa0548790 | 0.811500 | 6.786809e-51 | -8.615850e-47 |
| Msa0539260 | Msa0549170 | 0.815033 | 1.137098e-51 | -8.615850e-47 |
| Msa0539260 | Msa0549700 | -0.804213 | 2.406742e-49 | -8.615850e-47 |
| Msa0539260 | Msa0561830 | 0.824100 | 9.692931e-54 | -8.615850e-47 |
| Msa0539260 | Msa0567330 | 0.815777 | 7.769275e-52 | -8.615850e-47 |
| Msa0539260 | Msa0567570 | 0.823490 | 1.346631e-53 | -8.615850e-47 |
| Msa0539260 | Msa0576320 | 0.808447 | 3.083444e-50 | -8.615850e-47 |
| Msa0539260 | Msa0580410 | -0.817627 | 2.989317e-52 | -8.615850e-47 |
| Msa0539260 | Msa0580890 | -0.805532 | 1.275810e-49 | -8.615850e-47 |
| Msa0539260 | Msa0583270 | -0.807262 | 5.507692e-50 | -8.615850e-47 |
| Msa0539260 | Msa0587730 | 0.838144 | 3.424328e-57 | -8.615850e-47 |
| Msa0539260 | Msa0587930 | 0.825162 | 5.449185e-54 | -8.615850e-47 |
| Msa0539260 | Msa0589740 | 0.813872 | 2.054541e-51 | -8.615850e-47 |
| Msa0539260 | Msa0591490 | 0.807900 | 4.031752e-50 | -8.615850e-47 |
| Msa0539260 | Msa0594330 | 0.803126 | 4.045668e-49 | -8.615850e-47 |
| Msa0539260 | Msa0596600 | 0.805898 | 1.068835e-49 | -8.615850e-47 |
| Msa0539260 | Msa0597800 | 0.805197 | 1.499267e-49 | -8.615850e-47 |
| Msa0539260 | Msa0601400 | 0.810220 | 1.284625e-50 | -8.615850e-47 |
| Msa0539260 | Msa0602100 | 0.800419 | 1.453878e-48 | -8.615850e-47 |
| Msa0539260 | Msa0605150 | -0.813408 | 2.598280e-51 | -8.615850e-47 |
| Msa0539260 | Msa0614060 | -0.800298 | 1.538715e-48 | -8.615850e-47 |
| Msa0539260 | Msa0614960 | 0.825853 | 3.736836e-54 | -8.615850e-47 |
| Msa0539260 | Msa0616570 | -0.802601 | 5.193386e-49 | -8.615850e-47 |
| Msa0539260 | Msa0622450 | -0.802390 | 5.740299e-49 | -8.615850e-47 |
| Msa0539260 | Msa0622800 | -0.811155 | 8.064557e-51 | -8.615850e-47 |
| Msa0539260 | Msa0624260 | -0.808595 | 2.866397e-50 | -8.615850e-47 |
| Msa0539260 | Msa0624360 | -0.813314 | 2.725185e-51 | -8.615850e-47 |
| Msa0539260 | Msa0628200 | 0.827615 | 1.418973e-54 | -8.615850e-47 |
| Msa0539260 | Msa0634290 | 0.805264 | 1.451772e-49 | -8.615850e-47 |
| Msa0539260 | Msa0637700 | 0.805144 | 1.538429e-49 | -8.615850e-47 |
| Msa0539260 | Msa0638550 | -0.803014 | 4.266039e-49 | -8.615850e-47 |
| Msa0539260 | Msa0643230 | 0.801987 | 6.946366e-49 | -8.615850e-47 |
| Msa0539260 | Msa0645370 | 0.812048 | 5.158035e-51 | -8.615850e-47 |
| Msa0539260 | Msa0646310 | -0.806655 | 7.402581e-50 | -8.615850e-47 |
| Msa0539260 | Msa0655370 | 0.827808 | 1.275087e-54 | -8.615850e-47 |
| Msa0539260 | Msa0655980 | -0.803076 | 4.141959e-49 | -8.615850e-47 |
| Msa0539260 | Msa0659230 | 0.803331 | 3.669394e-49 | -8.615850e-47 |
| Msa0539260 | Msa0670360 | 0.812612 | 3.884373e-51 | -8.615850e-47 |
| Msa0539260 | Msa0680460 | 0.807161 | 5.785117e-50 | -8.615850e-47 |
| Msa0539260 | Msa0685810 | -0.808257 | 3.384500e-50 | -8.615850e-47 |
| Msa0539260 | Msa0685860 | -0.804946 | 1.692217e-49 | -8.615850e-47 |
| Msa0539260 | Msa0689840 | 0.820969 | 5.179905e-53 | -8.615850e-47 |
| Msa0539260 | Msa0694320 | 0.815668 | 8.214831e-52 | -8.615850e-47 |
| Msa0539260 | Msa0699170 | 0.830934 | 2.220483e-55 | -8.615850e-47 |
| Msa0539260 | Msa0699800 | 0.802347 | 5.858628e-49 | -8.615850e-47 |
| Msa0539260 | Msa0699900 | -0.804316 | 2.290263e-49 | -8.615850e-47 |
| Msa0539260 | Msa0701460 | -0.803405 | 3.541822e-49 | -8.615850e-47 |
| Msa0539260 | Msa0701530 | -0.800571 | 1.354295e-48 | -8.615850e-47 |
| Msa0539260 | Msa0711250 | 0.825606 | 4.277874e-54 | -8.615850e-47 |
| Msa0539260 | Msa0713570 | -0.805900 | 1.067573e-49 | -8.615850e-47 |
| Msa0539260 | Msa0717540 | -0.806895 | 6.588158e-50 | -8.615850e-47 |
| Msa0539260 | Msa0719330 | -0.818995 | 1.465304e-52 | -8.615850e-47 |
| Msa0539260 | Msa0728520 | 0.808104 | 3.648646e-50 | -8.615850e-47 |
| Msa0539260 | Msa0729120 | -0.820143 | 8.015380e-53 | -8.615850e-47 |
| Msa0539260 | Msa0750200 | -0.803379 | 3.584739e-49 | -8.615850e-47 |
| Msa0539260 | Msa0750790 | 0.815377 | 9.536905e-52 | -8.615850e-47 |
| Msa0539260 | Msa0750830 | 0.820168 | 7.910458e-53 | -8.615850e-47 |
| Msa0539260 | Msa0754020 | -0.804670 | 1.932816e-49 | -8.615850e-47 |
| Msa0539260 | Msa0754530 | 0.803327 | 3.676389e-49 | -8.615850e-47 |
| Msa0539260 | Msa0755550 | -0.806946 | 6.424099e-50 | -8.615850e-47 |
| Msa0539260 | Msa0758880 | -0.817423 | 3.324002e-52 | -8.615850e-47 |
| Msa0539260 | Msa0766910 | -0.818843 | 1.586409e-52 | -8.615850e-47 |
| Msa0539260 | Msa0772160 | -0.818879 | 1.557133e-52 | -8.615850e-47 |
| Msa0539260 | Msa0776540 | 0.810322 | 1.220940e-50 | -8.615850e-47 |
| Msa0539260 | Msa0777600 | 0.811780 | 5.899257e-51 | -8.615850e-47 |
| Msa0539260 | Msa0786600 | -0.811683 | 6.192837e-51 | -8.615850e-47 |
| Msa0539260 | Msa0792410 | 0.813869 | 2.057541e-51 | -8.615850e-47 |
| Msa0539260 | Msa0795910 | -0.817769 | 2.776506e-52 | -8.615850e-47 |
| Msa0539260 | Msa0797180 | -0.806135 | 9.527192e-50 | -8.615850e-47 |
| Msa0539260 | Msa0798840 | 0.803832 | 2.888526e-49 | -8.615850e-47 |
| Msa0539260 | Msa0801920 | -0.815330 | 9.768520e-52 | -8.615850e-47 |
| Msa0539260 | Msa0802600 | 0.808381 | 3.185597e-50 | -8.615850e-47 |
| Msa0539260 | Msa0803880 | 0.808059 | 3.730689e-50 | -8.615850e-47 |
| Msa0539260 | Msa0807100 | -0.801708 | 7.925020e-49 | -8.615850e-47 |
| Msa0539260 | Msa0807840 | -0.817978 | 2.490978e-52 | -8.615850e-47 |
| Msa0539260 | Msa0816140 | 0.810765 | 9.793571e-51 | -8.615850e-47 |
| Msa0539260 | Msa0822680 | -0.817444 | 3.287819e-52 | -8.615850e-47 |
| Msa0539260 | Msa0824850 | 0.810697 | 1.013533e-50 | -8.615850e-47 |
| Msa0539260 | Msa0827800 | 0.806373 | 8.490744e-50 | -8.615850e-47 |
| Msa0539260 | Msa0829250 | -0.808358 | 3.221758e-50 | -8.615850e-47 |
| Msa0539260 | Msa0829990 | 0.803584 | 3.251268e-49 | -8.615850e-47 |
| Msa0539260 | Msa0833030 | -0.808271 | 3.361954e-50 | -8.615850e-47 |
| Msa0539260 | Msa0833230 | 0.807023 | 6.189069e-50 | -8.615850e-47 |
| Msa0539260 | Msa0833360 | -0.819200 | 1.315685e-52 | -8.615850e-47 |
| Msa0539260 | Msa0835050 | -0.803823 | 2.900497e-49 | -8.615850e-47 |
| Msa0539260 | Msa0838120 | -0.816298 | 5.945112e-52 | -8.615850e-47 |
| Msa0539260 | Msa0840450 | -0.806809 | 6.867951e-50 | -8.615850e-47 |
| Msa0539260 | Msa0855260 | 0.817493 | 3.204932e-52 | -8.615850e-47 |
| Msa0539260 | Msa0863840 | 0.808514 | 2.984165e-50 | -8.615850e-47 |
| Msa0539260 | Msa0863850 | 0.807460 | 5.000896e-50 | -8.615850e-47 |
| Msa0539260 | Msa0863860 | 0.806761 | 7.030884e-50 | -8.615850e-47 |
| Msa0539260 | Msa0864160 | 0.809601 | 1.745669e-50 | -8.615850e-47 |
| Msa0539260 | Msa0866310 | -0.818534 | 1.864218e-52 | -8.615850e-47 |
| Msa0539260 | Msa0866510 | -0.800695 | 1.277124e-48 | -8.615850e-47 |
| Msa0539260 | Msa0868500 | -0.808461 | 3.062917e-50 | -8.615850e-47 |
| Msa0539260 | Msa0868510 | -0.808566 | 2.908114e-50 | -8.615850e-47 |
| Msa0539260 | Msa0868520 | -0.812851 | 3.443306e-51 | -8.615850e-47 |
| Msa0539260 | Msa0874750 | 0.832133 | 1.124581e-55 | -8.615850e-47 |
| Msa0539260 | Msa0896910 | 0.812979 | 3.228502e-51 | -8.615850e-47 |
| Msa0539260 | Msa0896920 | 0.830377 | 3.039121e-55 | -8.615850e-47 |
| Msa0539260 | Msa0896950 | 0.816926 | 4.297552e-52 | -8.615850e-47 |
| Msa0539260 | Msa0906680 | 0.809153 | 2.178400e-50 | -8.615850e-47 |
| Msa0539260 | Msa0921790 | 0.803600 | 3.226141e-49 | -8.615850e-47 |
| Msa0539260 | Msa0932040 | -0.800038 | 1.738408e-48 | -8.615850e-47 |
| Msa0539260 | Msa0941410 | -0.816655 | 4.943197e-52 | -8.615850e-47 |
| Msa0539260 | Msa0941420 | -0.821612 | 3.680023e-53 | -8.615850e-47 |
| Msa0539260 | Msa0960580 | 0.808071 | 3.708119e-50 | -8.615850e-47 |
| Msa0539260 | Msa0968990 | 0.805988 | 1.022928e-49 | -8.615850e-47 |
| Msa0539260 | Msa0970160 | -0.808102 | 3.652895e-50 | -8.615850e-47 |
| Msa0539260 | Msa0973010 | -0.824663 | 7.145929e-54 | -8.615850e-47 |
| Msa0539260 | Msa0974410 | -0.801412 | 9.115213e-49 | -8.615850e-47 |
| Msa0539260 | Msa0978540 | -0.817146 | 3.835814e-52 | -8.615850e-47 |
| Msa0539260 | Msa0978550 | -0.813870 | 2.056400e-51 | -8.615850e-47 |
| Msa0539260 | Msa0978560 | -0.817895 | 2.601550e-52 | -8.615850e-47 |
| Msa0539260 | Msa0984230 | -0.805591 | 1.239903e-49 | -8.615850e-47 |
| Msa0539260 | Msa0987020 | 0.810299 | 1.234950e-50 | -8.615850e-47 |
| Msa0539260 | Msa0996980 | 0.800812 | 1.209125e-48 | -8.615850e-47 |
| Msa0539260 | Msa1006030 | 0.836542 | 8.806691e-57 | -8.615850e-47 |
| Msa0539260 | Msa1007900 | 0.807593 | 4.686116e-50 | -8.615850e-47 |
| Msa0539260 | Msa1007930 | 0.810524 | 1.104252e-50 | -8.615850e-47 |
| Msa0539260 | Msa1020160 | -0.804912 | 1.720146e-49 | -8.615850e-47 |
| Msa0539260 | Msa1024480 | 0.800199 | 1.612380e-48 | -8.615850e-47 |
| Msa0539260 | Msa1028890 | -0.803884 | 2.816416e-49 | -8.615850e-47 |
| Msa0539260 | Msa1031190 | -0.811582 | 6.513833e-51 | -8.615850e-47 |
| Msa0539260 | Msa1035050 | 0.856209 | 3.755527e-62 | -8.615850e-47 |
| Msa0539260 | Msa1037360 | 0.807105 | 5.945310e-50 | -8.615850e-47 |
| Msa0539260 | Msa1038040 | -0.808990 | 2.360434e-50 | -8.615850e-47 |
| Msa0539260 | Msa1040030 | -0.806517 | 7.915259e-50 | -8.615850e-47 |
| Msa0539260 | Msa1041910 | 0.802825 | 4.667355e-49 | -8.615850e-47 |
| Msa0539260 | Msa1044050 | -0.821714 | 3.485490e-53 | -8.615850e-47 |
| Msa0539260 | Msa1048350 | 0.818896 | 1.542573e-52 | -8.615850e-47 |
| Msa0539260 | Msa1048390 | 0.809660 | 1.695739e-50 | -8.615850e-47 |
| Msa0539260 | Msa1049400 | 0.837874 | 4.016564e-57 | -8.615850e-47 |
| Msa0539260 | Msa1062060 | 0.847518 | 1.099361e-59 | -8.615850e-47 |
| Msa0539260 | Msa1064940 | 0.813714 | 2.225336e-51 | -8.615850e-47 |
| Msa0539260 | Msa1068010 | -0.803128 | 4.041940e-49 | -8.615850e-47 |
| Msa0539260 | Msa1070370 | -0.813269 | 2.787802e-51 | -8.615850e-47 |
| Msa0539260 | Msa1075030 | 0.812979 | 3.227325e-51 | -8.615850e-47 |
| Msa0539260 | Msa1075090 | 0.842285 | 2.839487e-58 | -8.615850e-47 |
| Msa0539260 | Msa1078120 | -0.815822 | 7.591892e-52 | -8.615850e-47 |
| Msa0539260 | Msa1085820 | 0.823313 | 1.481723e-53 | -8.615850e-47 |
| Msa0539260 | Msa1099640 | 0.821997 | 2.997880e-53 | -8.615850e-47 |
| Msa0539260 | Msa1099650 | 0.825568 | 4.367508e-54 | -8.615850e-47 |
| Msa0539260 | Msa1100330 | 0.832706 | 8.112338e-56 | -8.615850e-47 |
| Msa0539260 | Msa1106960 | 0.803248 | 3.815977e-49 | -8.615850e-47 |
| Msa0539260 | Msa1107220 | 0.835768 | 1.384564e-56 | -8.615850e-47 |
| Msa0539260 | Msa1107250 | 0.809916 | 1.493443e-50 | -8.615850e-47 |
| Msa0539260 | Msa1108610 | 0.801513 | 8.688912e-49 | -8.615850e-47 |
| Msa0539260 | Msa1109540 | 0.893412 | 6.442249e-75 | -8.615850e-47 |
| Msa0539260 | Msa1115900 | 0.803530 | 3.336028e-49 | -8.615850e-47 |
| Msa0539260 | Msa1119420 | -0.810753 | 9.854948e-51 | -8.615850e-47 |
| Msa0539260 | Msa1121580 | -0.802607 | 5.178265e-49 | -8.615850e-47 |
| Msa0539260 | Msa1123000 | 0.800059 | 1.721196e-48 | -8.615850e-47 |
| Msa0539260 | Msa1123260 | -0.810713 | 1.005455e-50 | -8.615850e-47 |
| Msa0539260 | Msa1123440 | -0.801533 | 8.608514e-49 | -8.615850e-47 |
| Msa0539260 | Msa1130150 | -0.801386 | 9.226535e-49 | -8.615850e-47 |
| Msa0539260 | Msa1132880 | -0.817023 | 4.087959e-52 | -8.615850e-47 |
| Msa0539260 | Msa1136630 | 0.824178 | 9.292496e-54 | -8.615850e-47 |
| Msa0539260 | Msa1136690 | 0.815719 | 8.004789e-52 | -8.615850e-47 |
| Msa0539260 | Msa1136760 | 0.824314 | 8.631434e-54 | -8.615850e-47 |
| Msa0539260 | Msa1138110 | 0.824842 | 6.483805e-54 | -8.615850e-47 |
| Msa0539260 | Msa1148210 | 0.816548 | 5.224577e-52 | -8.615850e-47 |
| Msa0539260 | Msa1150740 | 0.805349 | 1.393662e-49 | -8.615850e-47 |
| Msa0539260 | Msa1150760 | 0.823927 | 1.063875e-53 | -8.615850e-47 |
| Msa0539260 | Msa1156430 | -0.804457 | 2.140854e-49 | -8.615850e-47 |
| Msa0539260 | Msa1158180 | -0.809459 | 1.872816e-50 | -8.615850e-47 |
| Msa0539260 | Msa1162430 | 0.801591 | 8.378505e-49 | -8.615850e-47 |
| Msa0539260 | Msa1167960 | 0.802032 | 6.800697e-49 | -8.615850e-47 |
| Msa0539260 | Msa1170340 | 0.803605 | 3.219188e-49 | -8.615850e-47 |
| Msa0539260 | Msa1171640 | -0.810243 | 1.269663e-50 | -8.615850e-47 |
| Msa0539260 | Msa1190300 | -0.816409 | 5.613698e-52 | -8.615850e-47 |
| Msa0539260 | Msa1191270 | 0.846188 | 2.541620e-59 | -8.615850e-47 |
| Msa0539260 | Msa1191530 | -0.806799 | 6.900673e-50 | -8.615850e-47 |
| Msa0539260 | Msa1199540 | -0.808215 | 3.455036e-50 | -8.615850e-47 |
| Msa0539260 | Msa1201760 | 0.800658 | 1.299962e-48 | -8.615850e-47 |
| Msa0539260 | Msa1202110 | 0.810131 | 1.342452e-50 | -8.615850e-47 |
| Msa0539260 | Msa1203320 | -0.805917 | 1.058910e-49 | -8.615850e-47 |
| Msa0539260 | Msa1222900 | -0.810175 | 1.313534e-50 | -8.615850e-47 |
| Msa0539260 | Msa1223710 | 0.801756 | 7.748065e-49 | -8.615850e-47 |
| Msa0539260 | Msa1223960 | 0.802889 | 4.528451e-49 | -8.615850e-47 |
| Msa0539260 | Msa1223990 | 0.818288 | 2.119506e-52 | -8.615850e-47 |
| Msa0539260 | Msa1225850 | 0.805468 | 1.315465e-49 | -8.615850e-47 |
| Msa0539260 | Msa1236990 | -0.804792 | 1.821970e-49 | -8.615850e-47 |
| Msa0539260 | Msa1239190 | 0.813441 | 2.556069e-51 | -8.615850e-47 |
| Msa0539260 | Msa1239210 | 0.821659 | 3.590595e-53 | -8.615850e-47 |
| Msa0539260 | Msa1254870 | 0.810528 | 1.102376e-50 | -8.615850e-47 |
| Msa0539260 | Msa1263110 | 0.819642 | 1.043491e-52 | -8.615850e-47 |
| Msa0539260 | Msa1263120 | 0.807798 | 4.239840e-50 | -8.615850e-47 |
| Msa0539260 | Msa1266750 | -0.810848 | 9.396880e-51 | -8.615850e-47 |
| Msa0539260 | Msa1273320 | 0.817528 | 3.147557e-52 | -8.615850e-47 |
| Msa0539260 | Msa1278080 | -0.807530 | 4.832660e-50 | -8.615850e-47 |
| Msa0539260 | Msa1279200 | -0.808351 | 3.231611e-50 | -8.615850e-47 |
| Msa0539260 | Msa1290090 | -0.803412 | 3.528720e-49 | -8.615850e-47 |
| Msa0539260 | Msa1291070 | -0.804727 | 1.879945e-49 | -8.615850e-47 |
| Msa0539260 | Msa1303690 | -0.811832 | 5.747278e-51 | -8.615850e-47 |
| Msa0539260 | Msa1309670 | 0.830391 | 3.015488e-55 | -8.615850e-47 |
| Msa0539260 | Msa1314020 | 0.802217 | 6.229416e-49 | -8.615850e-47 |
| Msa0539260 | Msa1319010 | 0.813192 | 2.898394e-51 | -8.615850e-47 |
| Msa0539260 | Msa1319760 | 0.806646 | 7.436689e-50 | -8.615850e-47 |
| Msa0539260 | Msa1328430 | 0.811323 | 7.415880e-51 | -8.615850e-47 |
| Msa0539260 | Msa1328680 | -0.805916 | 1.059444e-49 | -8.615850e-47 |
| Msa0539260 | Msa1334670 | 0.802847 | 4.620374e-49 | -8.615850e-47 |
| Msa0539260 | Msa1341710 | -0.810068 | 1.385192e-50 | -8.615850e-47 |
| Msa0539260 | Msa1349420 | 0.817279 | 3.581729e-52 | -8.615850e-47 |
| Msa0539260 | Msa1355340 | 0.831018 | 2.117044e-55 | -8.615850e-47 |
| Msa0539260 | Msa1356500 | -0.802642 | 5.091345e-49 | -8.615850e-47 |
| Msa0539260 | Msa1357840 | 0.815065 | 1.118949e-51 | -8.615850e-47 |
| Msa0539260 | Msa1362520 | 0.801684 | 8.016058e-49 | -8.615850e-47 |
| Msa0539260 | Msa1363170 | -0.815699 | 8.084699e-52 | -8.615850e-47 |
| Msa0539260 | Msa1364690 | 0.840120 | 1.053081e-57 | -8.615850e-47 |
| Msa0539260 | Msa1365230 | 0.802077 | 6.658424e-49 | -8.615850e-47 |
| Msa0539260 | Msa1375650 | -0.810135 | 1.339661e-50 | -8.615850e-47 |
| Msa0539260 | Msa1384130 | 0.800999 | 1.107333e-48 | -8.615850e-47 |
| Msa0539260 | Msa1387100 | -0.801841 | 7.444576e-49 | -8.615850e-47 |
| Msa0539260 | Msa1398140 | 0.821729 | 3.457650e-53 | -8.615850e-47 |
| Msa0539260 | Msa1405040 | -0.814031 | 1.894903e-51 | -8.615850e-47 |
| Msa0539260 | Msa1407810 | 0.820908 | 5.349019e-53 | -8.615850e-47 |
| Msa0539260 | Msa1408230 | -0.803282 | 3.754754e-49 | -8.615850e-47 |
| Msa0539260 | Msa1408860 | -0.801662 | 8.098764e-49 | -8.615850e-47 |
| Msa0539260 | Msa1412360 | 0.806487 | 8.032317e-50 | -8.615850e-47 |
| Msa0539260 | Msa1417220 | 0.803399 | 3.552056e-49 | -8.615850e-47 |
| Msa0539260 | Msa1429180 | -0.804079 | 2.565596e-49 | -8.615850e-47 |
| Msa0539260 | Msa1430630 | -0.807297 | 5.415069e-50 | -8.615850e-47 |
| Msa0539260 | Msa1437590 | 0.820484 | 6.695347e-53 | -8.615850e-47 |
| Msa0539260 | Msa1437780 | 0.822370 | 2.456884e-53 | -8.615850e-47 |
| Msa0539260 | Msa1439000 | -0.803739 | 3.019721e-49 | -8.615850e-47 |
| Msa0539260 | Msa1444690 | -0.801091 | 1.060348e-48 | -8.615850e-47 |
| Msa0539260 | Msa1455200 | 0.837302 | 5.630600e-57 | -8.615850e-47 |
| Msa0539260 | Msa1459680 | -0.814649 | 1.383810e-51 | -8.615850e-47 |
| Msa0539260 | Msa1462610 | 0.813887 | 2.038516e-51 | -8.615850e-47 |
| Msa0539260 | Msa1462700 | -0.811692 | 6.164620e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0539260 | MtrunA17_Chr2g0332331 | 74.849 | 664 | 134 | 5 | 3 | 634 | 4 | 666 | 0.0 | 999 |
| Msa0539260 | MtrunA17_Chr2g0332351 | 75.228 | 658 | 131 | 4 | 3 | 628 | 4 | 661 | 0.0 | 999 |
| Msa0539260 | MtrunA17_Chr2g0332471 | 74.884 | 649 | 131 | 4 | 3 | 619 | 4 | 652 | 0.0 | 979 |
| Msa0539260 | MtrunA17_Chr2g0332441 | 76.451 | 586 | 108 | 4 | 45 | 600 | 2 | 587 | 0.0 | 896 |
| Msa0539260 | MtrunA17_Chr3g0138161 | 64.583 | 672 | 202 | 5 | 7 | 645 | 1 | 669 | 0.0 | 876 |
| Msa0539260 | MtrunA17_Chr2g0332491 | 70.144 | 623 | 121 | 4 | 3 | 619 | 4 | 567 | 0.0 | 864 |
| Msa0539260 | MtrunA17_Chr1g0148971 | 63.957 | 652 | 196 | 5 | 10 | 625 | 20 | 668 | 0.0 | 841 |
| Msa0539260 | MtrunA17_Chr7g0270341 | 55.590 | 653 | 253 | 6 | 4 | 620 | 1 | 652 | 0.0 | 704 |
| Msa0539260 | MtrunA17_Chr2g0293661 | 55.382 | 641 | 249 | 7 | 10 | 615 | 7 | 645 | 0.0 | 679 |
| Msa0539260 | MtrunA17_Chr3g0117521 | 55.778 | 649 | 249 | 9 | 4 | 615 | 1 | 648 | 0.0 | 677 |
| Msa0539260 | MtrunA17_Chr2g0332391 | 72.989 | 348 | 66 | 3 | 178 | 497 | 1 | 348 | 1.18e-179 | 513 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0539260 | AT1G15460.2 | 68.024 | 663 | 177 | 5 | 8 | 636 | 10 | 671 | 0.0 | 929 |
| Msa0539260 | AT1G15460.1 | 68.024 | 663 | 177 | 5 | 8 | 636 | 10 | 671 | 0.0 | 929 |
| Msa0539260 | AT1G74810.7 | 64.749 | 678 | 203 | 7 | 3 | 645 | 5 | 681 | 0.0 | 899 |
| Msa0539260 | AT1G74810.4 | 64.749 | 678 | 203 | 7 | 3 | 645 | 5 | 681 | 0.0 | 899 |
| Msa0539260 | AT1G74810.1 | 64.749 | 678 | 203 | 7 | 3 | 645 | 5 | 681 | 0.0 | 899 |
| Msa0539260 | AT1G15460.3 | 69.417 | 618 | 155 | 4 | 8 | 591 | 10 | 627 | 0.0 | 883 |
| Msa0539260 | AT4G32510.2 | 63.988 | 672 | 200 | 7 | 4 | 634 | 1 | 671 | 0.0 | 862 |
| Msa0539260 | AT4G32510.1 | 64.253 | 663 | 196 | 6 | 4 | 625 | 1 | 663 | 0.0 | 857 |
| Msa0539260 | AT1G74810.6 | 65.265 | 642 | 187 | 7 | 39 | 645 | 9 | 649 | 0.0 | 852 |
| Msa0539260 | AT1G74810.3 | 65.265 | 642 | 187 | 7 | 39 | 645 | 9 | 649 | 0.0 | 852 |
| Msa0539260 | AT5G25430.1 | 63.426 | 648 | 203 | 3 | 10 | 623 | 9 | 656 | 0.0 | 840 |
| Msa0539260 | AT1G15460.4 | 66.431 | 566 | 155 | 5 | 105 | 636 | 1 | 565 | 0.0 | 765 |
| Msa0539260 | AT1G74810.5 | 63.542 | 576 | 174 | 7 | 105 | 645 | 1 | 575 | 0.0 | 742 |
| Msa0539260 | AT3G62270.1 | 56.899 | 645 | 244 | 6 | 4 | 615 | 1 | 644 | 0.0 | 723 |
| Msa0539260 | AT2G47160.1 | 56.656 | 646 | 243 | 6 | 4 | 615 | 1 | 643 | 0.0 | 719 |
| Msa0539260 | AT2G47160.2 | 54.545 | 671 | 243 | 7 | 4 | 615 | 1 | 668 | 0.0 | 706 |
| Msa0539260 | AT3G06450.3 | 53.071 | 635 | 269 | 4 | 10 | 615 | 9 | 643 | 0.0 | 697 |
| Msa0539260 | AT3G06450.1 | 53.071 | 635 | 269 | 4 | 10 | 615 | 9 | 643 | 0.0 | 697 |
| Msa0539260 | AT3G06450.2 | 53.071 | 635 | 269 | 4 | 10 | 615 | 9 | 643 | 0.0 | 697 |
| Msa0539260 | AT3G06450.4 | 53.071 | 635 | 269 | 4 | 10 | 615 | 9 | 643 | 0.0 | 697 |
| Msa0539260 | AT1G74810.2 | 64.326 | 527 | 153 | 6 | 142 | 634 | 1 | 526 | 0.0 | 685 |
Find 134 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTGCATCTAGCTCTTTA+AGG | 0.156274 | 4_1:-20020268 | None:intergenic |
| TCACATATTATTTCATTATT+AGG | 0.167842 | 4_1:-20020950 | None:intergenic |
| GGAATCATACATTCAATTAT+TGG | 0.192328 | 4_1:+20016515 | Msa0539260:CDS |
| CTTCCAATGTGTGTATTTCT+TGG | 0.220500 | 4_1:+20020133 | Msa0539260:CDS |
| GTCTTCCTGGTAATCAATTC+TGG | 0.223462 | 4_1:+20019790 | Msa0539260:CDS |
| GTTCATTCAAGAGGCTATTA+AGG | 0.247348 | 4_1:+20017173 | Msa0539260:CDS |
| CTTTGCTCATTTACTCTAAC+AGG | 0.255775 | 4_1:-20019651 | None:intergenic |
| TGTGCTTTCCGTTCTGGTAT+TGG | 0.264166 | 4_1:+20015300 | Msa0539260:CDS |
| TGGACTTGTGCTTTCCGTTC+TGG | 0.268770 | 4_1:+20015294 | Msa0539260:CDS |
| CTTTGTTAATGATAGGATAT+TGG | 0.271262 | 4_1:+20015423 | Msa0539260:intron |
| AGAGCAAGATCTTGGTTATA+TGG | 0.279601 | 4_1:+20017435 | Msa0539260:CDS |
| TCACTGATAATTCCCTTAAA+AGG | 0.289770 | 4_1:-20015237 | None:intergenic |
| GTGTATTTCTTGGTTTGTTT+TGG | 0.295155 | 4_1:+20020143 | Msa0539260:CDS |
| CATTATGACATATTCTTACT+AGG | 0.298991 | 4_1:+20018208 | Msa0539260:CDS |
| TCACATAAAGCCAGTGAAAT+TGG | 0.305810 | 4_1:-20017353 | None:intergenic |
| GTGCTTTCCGTTCTGGTATT+GGG | 0.307157 | 4_1:+20015301 | Msa0539260:CDS |
| CTAAAAGAGGTAATCCTAAA+AGG | 0.314929 | 4_1:+20019567 | Msa0539260:CDS |
| CTAAGGACTTGGAGAAAATA+TGG | 0.324070 | 4_1:+20020995 | Msa0539260:three_prime_UTR |
| CTTTATGTGAATGGTTTACT+AGG | 0.330252 | 4_1:+20017366 | Msa0539260:CDS |
| GCTTTGCCTGTTATTGCCTT+TGG | 0.333578 | 4_1:+20015475 | Msa0539260:CDS |
| AAGAAGACTATGTATCTAAT+TGG | 0.335535 | 4_1:-20020104 | None:intergenic |
| TTCACCTAGCTTTGGATCAA+TGG | 0.338378 | 4_1:+20020483 | Msa0539260:CDS |
| TGCTTTATTTATGCTTGAAA+TGG | 0.338977 | 4_1:+20015200 | Msa0539260:exon |
| GCTAGCAACTCTGAAATCTA+TGG | 0.346046 | 4_1:+20019044 | Msa0539260:CDS |
| CTTTGATCATAGCGTTGCTT+CGG | 0.348715 | 4_1:+20018138 | Msa0539260:CDS |
| TTTGATCATAGCGTTGCTTC+GGG | 0.355202 | 4_1:+20018139 | Msa0539260:CDS |
| GGAAACAAGATTCCAGCTAT+TGG | 0.355801 | 4_1:-20020179 | None:intergenic |
| ATGGCCATTGATAGTCTTCC+TGG | 0.358761 | 4_1:+20019777 | Msa0539260:CDS |
| CTAGGTATTATATTCACATT+TGG | 0.359706 | 4_1:+20017384 | Msa0539260:CDS |
| GCAAGCAGTGTTTGTGGAAA+TGG | 0.365305 | 4_1:+20019073 | Msa0539260:CDS |
| ATTCCTGCCTTGATGGTAGC+AGG | 0.375523 | 4_1:+20018106 | Msa0539260:CDS |
| TGCTCACCAAAGGCAATAAC+AGG | 0.379306 | 4_1:-20015481 | None:intergenic |
| TTTCACTGGCTTTATGTGAA+TGG | 0.387832 | 4_1:+20017357 | Msa0539260:CDS |
| CATATTCTTACTAGGATTTG+TGG | 0.394900 | 4_1:+20018216 | Msa0539260:CDS |
| AGAGGAGCAACTAGTCTTCT+TGG | 0.398425 | 4_1:-20017866 | None:intergenic |
| CTTTCAGACTTCTGTGGAAA+GGG | 0.407120 | 4_1:+20019533 | Msa0539260:intron |
| GTGGGGATACTTTGCATACA+TGG | 0.407230 | 4_1:+20019758 | Msa0539260:CDS |
| CACAATGTTATAAAGATGAT+TGG | 0.423839 | 4_1:+20015274 | Msa0539260:CDS |
| ATCCTAAAAGGTGAAGATAA+AGG | 0.426756 | 4_1:+20019579 | Msa0539260:CDS |
| ACTTTGATTTGTGGACTACT+TGG | 0.427318 | 4_1:+20018351 | Msa0539260:CDS |
| CAAATGGATTCACCTAGCTT+TGG | 0.430914 | 4_1:+20020475 | Msa0539260:CDS |
| ATATCGTCAACAGATTTACT+AGG | 0.432276 | 4_1:+20017112 | Msa0539260:CDS |
| CATGCATCAATATGCTTCTC+AGG | 0.433291 | 4_1:-20019624 | None:intergenic |
| CCTCTCAGTTCTCAAGGGTT+TGG | 0.433377 | 4_1:+20018425 | Msa0539260:CDS |
| GGGACATCACGCTTCCTTTG+TGG | 0.433708 | 4_1:+20020073 | Msa0539260:CDS |
| GACTAGTTGCTCCTCTAGCT+TGG | 0.433751 | 4_1:+20017873 | Msa0539260:CDS |
| AGAGCAGAAGAGCAAGATCT+TGG | 0.434649 | 4_1:+20017427 | Msa0539260:CDS |
| TGGTGAGGACTAAAGAGCTT+GGG | 0.435731 | 4_1:-20020245 | None:intergenic |
| ACTTACTTGAACCACCTACT+AGG | 0.441604 | 4_1:-20019840 | None:intergenic |
| GAGCAAGATCTTGGTTATAT+GGG | 0.443047 | 4_1:+20017436 | Msa0539260:CDS |
| CACCATGCAAAACTTGTACT+TGG | 0.445339 | 4_1:-20021065 | None:intergenic |
| CTGGCTTCTACAGCTATTTG+TGG | 0.448446 | 4_1:+20016494 | Msa0539260:CDS |
| GCAAAGAAAATATAGGTAGT+TGG | 0.454754 | 4_1:-20015448 | None:intergenic |
| AATCTACATCTTTACACCAT+TGG | 0.456846 | 4_1:+20017897 | Msa0539260:CDS |
| CTCCTAGCAATATTTAATGT+TGG | 0.457606 | 4_1:+20017087 | Msa0539260:CDS |
| CTTGGTTTACCTCCTTCAAA+TGG | 0.460195 | 4_1:+20018369 | Msa0539260:CDS |
| CAAATAGCTAGCTAAGGACT+TGG | 0.463032 | 4_1:+20020984 | Msa0539260:exon |
| AGATCTTGGTTATATGGGAC+AGG | 0.463073 | 4_1:+20017441 | Msa0539260:CDS |
| TCTTCCTGGTAATCAATTCT+GGG | 0.464011 | 4_1:+20019791 | Msa0539260:CDS |
| CTCCTACAATAAGGAGTGGT+TGG | 0.469504 | 4_1:-20016541 | None:intergenic |
| TATCCCCACAAAACAGAAGT+TGG | 0.470017 | 4_1:-20019744 | None:intergenic |
| ACATTCCAGACTTTGATTTG+TGG | 0.470870 | 4_1:+20018342 | Msa0539260:intron |
| TTTAGCAAAGTTGTACAAGT+AGG | 0.472082 | 4_1:-20016591 | None:intergenic |
| AGCAGAAGCAAAGAAAATAT+AGG | 0.482036 | 4_1:-20015455 | None:intergenic |
| TTCAGTCTTGTTCATTCAAG+AGG | 0.482368 | 4_1:+20017164 | Msa0539260:CDS |
| CTTTCCCAGAATTGATTACC+AGG | 0.490212 | 4_1:-20019795 | None:intergenic |
| GGAATTATCAGTGATATAAG+AGG | 0.491020 | 4_1:+20015246 | Msa0539260:CDS |
| AGAGGCTCTTAGTATGCATA+GGG | 0.494791 | 4_1:-20018407 | None:intergenic |
| TTCTCTTTGTATCACCTAGT+AGG | 0.494826 | 4_1:+20019826 | Msa0539260:CDS |
| GTTCTGCAACTCCTACAATA+AGG | 0.495209 | 4_1:-20016550 | None:intergenic |
| CATACACTTAAAGAGAGTCT+TGG | 0.497278 | 4_1:-20020314 | None:intergenic |
| TTCCTGCCTTGATGGTAGCA+GGG | 0.499828 | 4_1:+20018107 | Msa0539260:CDS |
| TAAGAGCCTCTCAGTTCTCA+AGG | 0.505455 | 4_1:+20018419 | Msa0539260:CDS |
| ACTAGTTGCTCCTCTAGCTT+GGG | 0.506471 | 4_1:+20017874 | Msa0539260:CDS |
| GCTGAATATGAAGAAATTGC+TGG | 0.508359 | 4_1:+20020287 | Msa0539260:CDS |
| TGAGGAAGAACACCATTTGA+AGG | 0.516885 | 4_1:-20018381 | None:intergenic |
| AAAGATGCAAGCAGTGTTTG+TGG | 0.516975 | 4_1:+20019067 | Msa0539260:CDS |
| GGCCAACCACTCCTTATTGT+AGG | 0.517222 | 4_1:+20016539 | Msa0539260:CDS |
| GTGGTGAGGACTAAAGAGCT+TGG | 0.518406 | 4_1:-20020246 | None:intergenic |
| GTGACATGGATTCCAATAGC+TGG | 0.521942 | 4_1:+20020167 | Msa0539260:CDS |
| CAGAACAGTACCAATTTCAC+TGG | 0.525064 | 4_1:+20017343 | Msa0539260:CDS |
| ATTTCCATTGATCCAAAGCT+AGG | 0.528239 | 4_1:-20020487 | None:intergenic |
| CTGGTAATCAATTCTGGGAA+AGG | 0.528888 | 4_1:+20019796 | Msa0539260:CDS |
| TCATAGCGTTGCTTCGGGGA+TGG | 0.529659 | 4_1:+20018144 | Msa0539260:CDS |
| AGTCTTCTTGGAATTTCAGA+AGG | 0.536248 | 4_1:-20017854 | None:intergenic |
| GTAGATGATCAGAAGAAAGA+TGG | 0.537686 | 4_1:+20018989 | Msa0539260:intron |
| ATTACCAGGAAGACTATCAA+TGG | 0.540612 | 4_1:-20019781 | None:intergenic |
| TTATGCTGCAGGACATGGGA+AGG | 0.542317 | 4_1:+20018053 | Msa0539260:intron |
| TTCGGGGATGGCACAGCAGA+AGG | 0.544389 | 4_1:+20018156 | Msa0539260:CDS |
| AATCATCAAATAGCTAGCTA+AGG | 0.548258 | 4_1:+20020978 | Msa0539260:exon |
| ACTTTCAGACTTCTGTGGAA+AGG | 0.550041 | 4_1:+20019532 | Msa0539260:intron |
| TATTTATGCTTGAAATGGAG+TGG | 0.551216 | 4_1:+20015205 | Msa0539260:exon |
| TCTTTGTATCACCTAGTAGG+TGG | 0.553864 | 4_1:+20019829 | Msa0539260:CDS |
| TGCCAACATTAAATATTGCT+AGG | 0.555211 | 4_1:-20017089 | None:intergenic |
| CTTGGAGAAAATATGGTAAG+TGG | 0.556482 | 4_1:+20021002 | Msa0539260:three_prime_UTR |
| AGCCCTGCTACCATCAAGGC+AGG | 0.556589 | 4_1:-20018109 | None:intergenic |
| ATCGACTAGAACAACAACTA+AGG | 0.559094 | 4_1:+20015070 | None:intergenic |
| AAACCAAGAAATACACACAT+TGG | 0.560504 | 4_1:-20020136 | None:intergenic |
| TAGGTATACATGATGATGGT+GGG | 0.568391 | 4_1:-20016572 | None:intergenic |
| TCGATTCAGCTGCTCACCAA+AGG | 0.568516 | 4_1:-20015491 | None:intergenic |
| GGTTAACTTTCAGACTTCTG+TGG | 0.572038 | 4_1:+20019527 | Msa0539260:intron |
| CAATTTATGCTGCAGGACAT+GGG | 0.573504 | 4_1:+20018049 | Msa0539260:intron |
| GAGAGGCTCTTAGTATGCAT+AGG | 0.573703 | 4_1:-20018408 | None:intergenic |
| GTAAAGCCCTGCTACCATCA+AGG | 0.579565 | 4_1:-20018113 | None:intergenic |
| ATCATACATTCAATTATTGG+AGG | 0.587308 | 4_1:+20016518 | Msa0539260:CDS |
| AAGAGCCTCTCAGTTCTCAA+GGG | 0.591940 | 4_1:+20018420 | Msa0539260:CDS |
| GGAGGATATACTGCCTCACA+AGG | 0.592109 | 4_1:-20020223 | None:intergenic |
| TATCGTCAACAGATTTACTA+GGG | 0.593342 | 4_1:+20017113 | Msa0539260:CDS |
| TATGCTGCAGGACATGGGAA+GGG | 0.598343 | 4_1:+20018054 | Msa0539260:intron |
| AAAGATGGTTGAAACTGCCA+AGG | 0.602722 | 4_1:+20019004 | Msa0539260:CDS |
| GGAACTAGAGAACCTAAAAG+AGG | 0.603100 | 4_1:+20019554 | Msa0539260:CDS |
| TTAGTATGCATAGGGGATTG+AGG | 0.605462 | 4_1:-20018399 | None:intergenic |
| TCTAGCTCTTTAAGGTGGTG+AGG | 0.612046 | 4_1:-20020260 | None:intergenic |
| GATGTAGATTCCCAAGCTAG+AGG | 0.615069 | 4_1:-20017884 | None:intergenic |
| CAAGTAGGTATACATGATGA+TGG | 0.617804 | 4_1:-20016576 | None:intergenic |
| AATTGGTACTGTTTCCACAA+AGG | 0.619899 | 4_1:-20020087 | None:intergenic |
| GATGAATTAACTACAAGCAG+AGG | 0.625445 | 4_1:+20020529 | Msa0539260:CDS |
| GTAGGTATACATGATGATGG+TGG | 0.632071 | 4_1:-20016573 | None:intergenic |
| TTACTTTGATAACTGTCCAA+TGG | 0.633020 | 4_1:-20017913 | None:intergenic |
| TCTTCAATGCTGTATAGAGA+AGG | 0.634140 | 4_1:-20017407 | None:intergenic |
| ATGTCATAATGATATGCAGA+AGG | 0.635380 | 4_1:-20018196 | None:intergenic |
| TTGATCATAGCGTTGCTTCG+GGG | 0.645474 | 4_1:+20018140 | Msa0539260:CDS |
| ATTGAGCACAGTAGAAACAC+TGG | 0.647913 | 4_1:+20016475 | Msa0539260:CDS |
| GGAAGAACACCATTTGAAGG+AGG | 0.648209 | 4_1:-20018378 | None:intergenic |
| GGTGAGGACTAAAGAGCTTG+GGG | 0.650670 | 4_1:-20020244 | None:intergenic |
| CTGCATCTAGCTCTTTAAGG+TGG | 0.662665 | 4_1:-20020265 | None:intergenic |
| AAACTTACCCAATACCAGAA+CGG | 0.665316 | 4_1:-20015308 | None:intergenic |
| AGCTTCAGAGAGGAAAGACA+TGG | 0.666851 | 4_1:+20020574 | Msa0539260:CDS |
| GAGCAGCTGAATCGAGACAC+AGG | 0.681742 | 4_1:+20015499 | Msa0539260:CDS |
| GCAACTCCTACAATAAGGAG+TGG | 0.692771 | 4_1:-20016545 | None:intergenic |
| CAGAACTTTAAGCTTCAGAG+AGG | 0.700821 | 4_1:+20020564 | Msa0539260:CDS |
| GAGGACTAAAGAGCTTGGGG+AGG | 0.702593 | 4_1:-20020241 | None:intergenic |
| CCAAACCCTTGAGAACTGAG+AGG | 0.733266 | 4_1:-20018425 | None:intergenic |
| GAGGCTCTTAGTATGCATAG+GGG | 0.790150 | 4_1:-20018406 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAAAATAAAAAATAAAT+TGG | - | chr4_1:20020872-20020891 | None:intergenic | 0.0% |
| !! | CAAATTCTTTATTATTATAA+TGG | + | chr4_1:20016676-20016695 | Msa0539260:intron | 10.0% |
| !! | AAAAATATATCAAGTTAATA+TGG | + | chr4_1:20017979-20017998 | Msa0539260:intron | 10.0% |
| !!! | TTTTTAATAGTATTTACAAA+GGG | - | chr4_1:20018260-20018279 | None:intergenic | 10.0% |
| !! | ATTTGTATTAATGATTAAAT+GGG | + | chr4_1:20018937-20018956 | Msa0539260:intron | 10.0% |
| !! | TGTTAAATTAATATTATTGC+TGG | + | chr4_1:20015096-20015115 | Msa0539260:intron | 15.0% |
| !! | TAGATGTATAATTCTAATTA+AGG | + | chr4_1:20015855-20015874 | Msa0539260:intron | 15.0% |
| !! | TTAAGCTTATAAAATAACTT+TGG | - | chr4_1:20015960-20015979 | None:intergenic | 15.0% |
| !!! | TTGTTTATTTTTTTCATAGA+TGG | + | chr4_1:20016449-20016468 | Msa0539260:intron | 15.0% |
| !!! | TTATTTCTATATATTTTCTC+AGG | + | chr4_1:20017034-20017053 | Msa0539260:intron | 15.0% |
| !!! | TATTTCTATATATTTTCTCA+GGG | + | chr4_1:20017035-20017054 | Msa0539260:intron | 15.0% |
| !!! | AAATATAATTTTGCTTGAAA+AGG | + | chr4_1:20017243-20017262 | Msa0539260:intron | 15.0% |
| !!! | CTTTTTAATAGTATTTACAA+AGG | - | chr4_1:20018261-20018280 | None:intergenic | 15.0% |
| !!! | ACAAAATTTTGTTTAAATAC+TGG | - | chr4_1:20018744-20018763 | None:intergenic | 15.0% |
| !! | CATTTGTATTAATGATTAAA+TGG | + | chr4_1:20018936-20018955 | Msa0539260:intron | 15.0% |
| !! | AAATCAAGAAAAAAGAAATT+TGG | - | chr4_1:20020625-20020644 | None:intergenic | 15.0% |
| !!! | TAGGTTTTAAAGATAATTTA+TGG | + | chr4_1:20020788-20020807 | Msa0539260:intron | 15.0% |
| !! | AAAAAATAAATTGGTCATTA+AGG | - | chr4_1:20020863-20020882 | None:intergenic | 15.0% |
| !! | TCACATATTATTTCATTATT+AGG | - | chr4_1:20020953-20020972 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTTCCGTAAATT+AGG | + | chr4_1:20015546-20015565 | Msa0539260:intron | 20.0% |
| !!! | TTTAGTCTTAGTCATATTAT+TGG | - | chr4_1:20015744-20015763 | None:intergenic | 20.0% |
| !! | AATATGACTAAGACTAAATT+CGG | + | chr4_1:20015746-20015765 | Msa0539260:intron | 20.0% |
| !! | AATTAGAATTATACATCTAG+AGG | - | chr4_1:20015854-20015873 | None:intergenic | 20.0% |
| !! | TATAATTCTAATTAAGGATG+AGG | + | chr4_1:20015861-20015880 | Msa0539260:intron | 20.0% |
| !! | AAAGTTTACTAAAATTATGC+AGG | + | chr4_1:20017275-20017294 | Msa0539260:intron | 20.0% |
| !! | AAGTTTACTAAAATTATGCA+GGG | + | chr4_1:20017276-20017295 | Msa0539260:intron | 20.0% |
| !!! | AGTTGTTAAAAGTATATATG+AGG | + | chr4_1:20017707-20017726 | Msa0539260:intron | 20.0% |
| !!! | ACTACAAAAAGTATAACTTA+GGG | - | chr4_1:20018011-20018030 | None:intergenic | 20.0% |
| !!! | AACTACAAAAAGTATAACTT+AGG | - | chr4_1:20018012-20018031 | None:intergenic | 20.0% |
| !!! | CAATTTTAGAACAACTAATT+CGG | - | chr4_1:20018905-20018924 | None:intergenic | 20.0% |
| !! | CAAATAGTAAAGTTATGTAT+CGG | + | chr4_1:20019173-20019192 | Msa0539260:intron | 20.0% |
| !!! | TTCAATCTAAAGTTACTTAT+TGG | + | chr4_1:20019320-20019339 | Msa0539260:intron | 20.0% |
| !!! | TTTACTTTTTTTTCAGCAAA+TGG | + | chr4_1:20020459-20020478 | Msa0539260:intron | 20.0% |
| !!! | AAAAGAAATTTGGTAATCTT+TGG | - | chr4_1:20020615-20020634 | None:intergenic | 20.0% |
| !! | TTATAGAAACAATTTATGAC+AGG | + | chr4_1:20020723-20020742 | Msa0539260:intron | 20.0% |
| !!! | ATTATCTTTAAAACCTATTC+CGG | - | chr4_1:20020785-20020804 | None:intergenic | 20.0% |
| !!! | TATGTGATAAGTGTTTTATT+AGG | + | chr4_1:20020819-20020838 | Msa0539260:intron | 20.0% |
| ! | TTATTGCTGGAAAATATGAT+TGG | + | chr4_1:20015109-20015128 | Msa0539260:intron | 25.0% |
| ! | TAAGATATAGTTTCATTCTC+AGG | + | chr4_1:20015172-20015191 | Msa0539260:intron | 25.0% |
| !!! | TGCTTTATTTATGCTTGAAA+TGG | + | chr4_1:20015200-20015219 | Msa0539260:exon | 25.0% |
| !! | TGGTTAAAATCACCTTTTAA+GGG | + | chr4_1:20015225-20015244 | Msa0539260:CDS | 25.0% |
| ! | CACAATGTTATAAAGATGAT+TGG | + | chr4_1:20015274-20015293 | Msa0539260:CDS | 25.0% |
| !!! | GAACTTGCACTTTTTTTTTT+TGG | + | chr4_1:20015384-20015403 | Msa0539260:intron | 25.0% |
| ! | CTTTGTTAATGATAGGATAT+TGG | + | chr4_1:20015423-20015442 | Msa0539260:intron | 25.0% |
| !! | TAATGAGAGATTCTGAAAAT+TGG | + | chr4_1:20015988-20016007 | Msa0539260:intron | 25.0% |
| ! | GGAATCATACATTCAATTAT+TGG | + | chr4_1:20016515-20016534 | Msa0539260:CDS | 25.0% |
| ! | ATCATACATTCAATTATTGG+AGG | + | chr4_1:20016518-20016537 | Msa0539260:CDS | 25.0% |
| ! | GTACAACTTTGCTAAAAATA+AGG | + | chr4_1:20016598-20016617 | Msa0539260:CDS | 25.0% |
| ! | AACTTTGCTAAAAATAAGGA+TGG | + | chr4_1:20016602-20016621 | Msa0539260:CDS | 25.0% |
| !!! | AAGACCATTTTTTTTAAGGA+AGG | + | chr4_1:20016872-20016891 | Msa0539260:intron | 25.0% |
| ! | AAATAAAACGGTCTACATAT+AGG | - | chr4_1:20016933-20016952 | None:intergenic | 25.0% |
| ! | TTAAGTGCTTATAACATAAG+AGG | + | chr4_1:20016986-20017005 | Msa0539260:intron | 25.0% |
| !!! | GAAGTTGAGTTTTCATTTTT+AGG | - | chr4_1:20017324-20017343 | None:intergenic | 25.0% |
| ! | CTAGGTATTATATTCACATT+TGG | + | chr4_1:20017384-20017403 | Msa0539260:CDS | 25.0% |
| ! | TGAGGAATATTTATATGACA+TGG | + | chr4_1:20017725-20017744 | Msa0539260:intron | 25.0% |
| ! | TATGACATGGTCATATTTAT+TGG | + | chr4_1:20017738-20017757 | Msa0539260:intron | 25.0% |
| ! | AAAGCAGCAAAAATATATGT+TGG | - | chr4_1:20018085-20018104 | None:intergenic | 25.0% |
| ! | CATTATGACATATTCTTACT+AGG | + | chr4_1:20018208-20018227 | Msa0539260:CDS | 25.0% |
| !!! | AATTACCTAATGCTTTGTTT+TGG | + | chr4_1:20018314-20018333 | Msa0539260:intron | 25.0% |
| ! | TTATAGAAAATATGCGAGTT+TGG | + | chr4_1:20018609-20018628 | Msa0539260:intron | 25.0% |
| !!! | CGAATTAGTTGTTCTAAAAT+TGG | + | chr4_1:20018903-20018922 | Msa0539260:intron | 25.0% |
| !!! | TTAGTTGTTCTAAAATTGGT+AGG | + | chr4_1:20018907-20018926 | Msa0539260:intron | 25.0% |
| !!! | TAGTTGTTCTAAAATTGGTA+GGG | + | chr4_1:20018908-20018927 | Msa0539260:intron | 25.0% |
| !! | TAAATGGGATACTTTTGATA+AGG | + | chr4_1:20018952-20018971 | Msa0539260:intron | 25.0% |
| !!! | TTTCTTTTTTATGCTTTCCT+TGG | - | chr4_1:20019024-20019043 | None:intergenic | 25.0% |
| ! | CTATTATAAGACTTACAACT+GGG | - | chr4_1:20019106-20019125 | None:intergenic | 25.0% |
| ! | ACTATTATAAGACTTACAAC+TGG | - | chr4_1:20019107-20019126 | None:intergenic | 25.0% |
| ! | ATTTCATTTCCTCATCAATT+TGG | + | chr4_1:20019879-20019898 | Msa0539260:intron | 25.0% |
| ! | TTTCATTTCCTCATCAATTT+GGG | + | chr4_1:20019880-20019899 | Msa0539260:intron | 25.0% |
| !! | ATGATTTTAAATTGCAGTTG+TGG | - | chr4_1:20020014-20020033 | None:intergenic | 25.0% |
| ! | AAGAAGACTATGTATCTAAT+TGG | - | chr4_1:20020107-20020126 | None:intergenic | 25.0% |
| ! | TTAGAATTGAGATCAAATAG+TGG | - | chr4_1:20020359-20020378 | None:intergenic | 25.0% |
| ! | ATTGTCACAAGTATTTATGT+CGG | - | chr4_1:20020691-20020710 | None:intergenic | 25.0% |
| !! | TATTAGGTTGTTTATCCAAA+TGG | + | chr4_1:20020835-20020854 | Msa0539260:intron | 25.0% |
| !!! | TTTTCTTCTAGAGATAGAAA+CGG | - | chr4_1:20021031-20021050 | None:intergenic | 25.0% |
| TATTTATGCTTGAAATGGAG+TGG | + | chr4_1:20015205-20015224 | Msa0539260:exon | 30.0% | |
| ! | GTGGTTAAAATCACCTTTTA+AGG | + | chr4_1:20015224-20015243 | Msa0539260:CDS | 30.0% |
| TCACTGATAATTCCCTTAAA+AGG | - | chr4_1:20015240-20015259 | None:intergenic | 30.0% | |
| GGAATTATCAGTGATATAAG+AGG | + | chr4_1:20015246-20015265 | Msa0539260:CDS | 30.0% | |
| ACTTGCACTTTGTTAATGAT+AGG | + | chr4_1:20015416-20015435 | Msa0539260:intron | 30.0% | |
| GCAAAGAAAATATAGGTAGT+TGG | - | chr4_1:20015451-20015470 | None:intergenic | 30.0% | |
| AGCAGAAGCAAAGAAAATAT+AGG | - | chr4_1:20015458-20015477 | None:intergenic | 30.0% | |
| ! | CTTATGAAGAGTTTGTTTGA+GGG | - | chr4_1:20015602-20015621 | None:intergenic | 30.0% |
| ! | TCTTATGAAGAGTTTGTTTG+AGG | - | chr4_1:20015603-20015622 | None:intergenic | 30.0% |
| AATTCTAATTAAGGATGAGG+TGG | + | chr4_1:20015864-20015883 | Msa0539260:intron | 30.0% | |
| !! | TGTTAGAATTTAGCTTGATG+TGG | - | chr4_1:20015906-20015925 | None:intergenic | 30.0% |
| TTTAGCAAAGTTGTACAAGT+AGG | - | chr4_1:20016594-20016613 | None:intergenic | 30.0% | |
| !!! | GAGCAAGACCATTTTTTTTA+AGG | + | chr4_1:20016868-20016887 | Msa0539260:intron | 30.0% |
| TGCTCCTTCCTTAAAAAAAA+TGG | - | chr4_1:20016879-20016898 | None:intergenic | 30.0% | |
| CTCCTAGCAATATTTAATGT+TGG | + | chr4_1:20017087-20017106 | Msa0539260:CDS | 30.0% | |
| TGCCAACATTAAATATTGCT+AGG | - | chr4_1:20017092-20017111 | None:intergenic | 30.0% | |
| ATATCGTCAACAGATTTACT+AGG | + | chr4_1:20017112-20017131 | Msa0539260:CDS | 30.0% | |
| TATCGTCAACAGATTTACTA+GGG | + | chr4_1:20017113-20017132 | Msa0539260:CDS | 30.0% | |
| CTTTATGTGAATGGTTTACT+AGG | + | chr4_1:20017366-20017385 | Msa0539260:CDS | 30.0% | |
| CATGGTCATATTTATTGGAT+AGG | + | chr4_1:20017743-20017762 | Msa0539260:intron | 30.0% | |
| GTCATATTTATTGGATAGGT+TGG | + | chr4_1:20017747-20017766 | Msa0539260:intron | 30.0% | |
| !!! | ATTTCAGAAGGTATTTTGCT+TGG | - | chr4_1:20017845-20017864 | None:intergenic | 30.0% |
| AATCTACATCTTTACACCAT+TGG | + | chr4_1:20017897-20017916 | Msa0539260:CDS | 30.0% | |
| ! | TTACTTTGATAACTGTCCAA+TGG | - | chr4_1:20017916-20017935 | None:intergenic | 30.0% |
| AAAGTTAGATCATCCAAACA+AGG | - | chr4_1:20017956-20017975 | None:intergenic | 30.0% | |
| ATGTCATAATGATATGCAGA+AGG | - | chr4_1:20018199-20018218 | None:intergenic | 30.0% | |
| CATATTCTTACTAGGATTTG+TGG | + | chr4_1:20018216-20018235 | Msa0539260:CDS | 30.0% | |
| !! | TTTTGCCAAAACAAAGCATT+AGG | - | chr4_1:20018322-20018341 | None:intergenic | 30.0% |
| ! | AACATTGCATTTTGCAAGAT+AGG | + | chr4_1:20018538-20018557 | Msa0539260:intron | 30.0% |
| !! | AATACATGAGGTTTGTTACA+TGG | - | chr4_1:20018705-20018724 | None:intergenic | 30.0% |
| CACTTATTAGAGAATACATG+AGG | - | chr4_1:20018717-20018736 | None:intergenic | 30.0% | |
| CTCATGTATTCTCTAATAAG+TGG | + | chr4_1:20018715-20018734 | Msa0539260:intron | 30.0% | |
| CAACAATTGATCACATAGTT+CGG | - | chr4_1:20018848-20018867 | None:intergenic | 30.0% | |
| !! | AGTTGTTCTAAAATTGGTAG+GGG | + | chr4_1:20018909-20018928 | Msa0539260:intron | 30.0% |
| AGTGTATCTAGTGTCTAATA+CGG | - | chr4_1:20019300-20019319 | None:intergenic | 30.0% | |
| CTAACACTTTAGATTGAAGA+CGG | - | chr4_1:20019479-20019498 | None:intergenic | 30.0% | |
| !! | TAGCTTATTTTTCCCAAACA+TGG | + | chr4_1:20019506-20019525 | Msa0539260:intron | 30.0% |
| TCTGAAAGTTAACCATGTTT+GGG | - | chr4_1:20019521-20019540 | None:intergenic | 30.0% | |
| !!! | CTTTTAGGATTACCTCTTTT+AGG | - | chr4_1:20019569-20019588 | None:intergenic | 30.0% |
| CTAAAAGAGGTAATCCTAAA+AGG | + | chr4_1:20019567-20019586 | Msa0539260:CDS | 30.0% | |
| ATCCTAAAAGGTGAAGATAA+AGG | + | chr4_1:20019579-20019598 | Msa0539260:CDS | 30.0% | |
| ! | CTTTTACAATCACTCTTTGT+TGG | + | chr4_1:20019684-20019703 | Msa0539260:CDS | 30.0% |
| ! | AATTTTCTTAATGACAGGCA+TGG | - | chr4_1:20019724-20019743 | None:intergenic | 30.0% |
| ! | GTTGGAATTTTCTTAATGAC+AGG | - | chr4_1:20019729-20019748 | None:intergenic | 30.0% |
| ! | AAATTCCAACTTCTGTTTTG+TGG | + | chr4_1:20019739-20019758 | Msa0539260:CDS | 30.0% |
| ! | AATTCCAACTTCTGTTTTGT+GGG | + | chr4_1:20019740-20019759 | Msa0539260:CDS | 30.0% |
| AATTACAACTGTTCATGGTT+CGG | - | chr4_1:20019987-20020006 | None:intergenic | 30.0% | |
| AAACCAAGAAATACACACAT+TGG | - | chr4_1:20020139-20020158 | None:intergenic | 30.0% | |
| !!! | GTGTATTTCTTGGTTTGTTT+TGG | + | chr4_1:20020143-20020162 | Msa0539260:CDS | 30.0% |
| ATCAGTAAAAAGAATGGCAA+AGG | - | chr4_1:20020203-20020222 | None:intergenic | 30.0% | |
| ACAAGGATCAGTAAAAAGAA+TGG | - | chr4_1:20020209-20020228 | None:intergenic | 30.0% | |
| TTGAGATCAAATAGTGGTAT+AGG | - | chr4_1:20020353-20020372 | None:intergenic | 30.0% | |
| AATCATCAAATAGCTAGCTA+AGG | + | chr4_1:20020978-20020997 | Msa0539260:exon | 30.0% | |
| AAACTTACCCAATACCAGAA+CGG | - | chr4_1:20015311-20015330 | None:intergenic | 35.0% | |
| ! | GATGTTTGACCACCAATTTT+TGG | + | chr4_1:20015793-20015812 | Msa0539260:intron | 35.0% |
| ! | GAGATTCTGAAAATTGGAGA+TGG | + | chr4_1:20015994-20016013 | Msa0539260:intron | 35.0% |
| !! | TAGGTATACATGATGATGGT+GGG | - | chr4_1:20016575-20016594 | None:intergenic | 35.0% |
| CAAGTAGGTATACATGATGA+TGG | - | chr4_1:20016579-20016598 | None:intergenic | 35.0% | |
| TGCTAAAAATAAGGATGGCT+TGG | + | chr4_1:20016607-20016626 | Msa0539260:CDS | 35.0% | |
| GCTAAAAATAAGGATGGCTT+GGG | + | chr4_1:20016608-20016627 | Msa0539260:CDS | 35.0% | |
| !!! | ACAAGAACTCTTTTTGGCTT+GGG | + | chr4_1:20016631-20016650 | Msa0539260:CDS | 35.0% |
| !!! | AAGACTTTTTCACTTGTGCA+CGG | - | chr4_1:20016767-20016786 | None:intergenic | 35.0% |
| ATGAAAAAGACACATGTGCA+TGG | + | chr4_1:20016846-20016865 | Msa0539260:intron | 35.0% | |
| ! | ATTTTCTCAGGGTTTGTGTA+TGG | + | chr4_1:20017046-20017065 | Msa0539260:intron | 35.0% |
| !! | TTCAGTCTTGTTCATTCAAG+AGG | + | chr4_1:20017164-20017183 | Msa0539260:CDS | 35.0% |
| GTTCATTCAAGAGGCTATTA+AGG | + | chr4_1:20017173-20017192 | Msa0539260:CDS | 35.0% | |
| TCACATAAAGCCAGTGAAAT+TGG | - | chr4_1:20017356-20017375 | None:intergenic | 35.0% | |
| !! | TTTCACTGGCTTTATGTGAA+TGG | + | chr4_1:20017357-20017376 | Msa0539260:CDS | 35.0% |
| TCTTCAATGCTGTATAGAGA+AGG | - | chr4_1:20017410-20017429 | None:intergenic | 35.0% | |
| AGAGCAAGATCTTGGTTATA+TGG | + | chr4_1:20017435-20017454 | Msa0539260:CDS | 35.0% | |
| GAGCAAGATCTTGGTTATAT+GGG | + | chr4_1:20017436-20017455 | Msa0539260:CDS | 35.0% | |
| TATTTAGCACATAGTGTCTC+TGG | + | chr4_1:20017543-20017562 | Msa0539260:intron | 35.0% | |
| ATACAAGCACAAACACGATA+TGG | - | chr4_1:20017676-20017695 | None:intergenic | 35.0% | |
| !! | AGAAGCTTTATTGCAGACTA+TGG | + | chr4_1:20017773-20017792 | Msa0539260:intron | 35.0% |
| AGTCTTCTTGGAATTTCAGA+AGG | - | chr4_1:20017857-20017876 | None:intergenic | 35.0% | |
| !! | TGTTGAACTAAAGCCTTGTT+TGG | + | chr4_1:20017940-20017959 | Msa0539260:intron | 35.0% |
| TTGAGTTCAATTTATGCTGC+AGG | + | chr4_1:20018042-20018061 | Msa0539260:intron | 35.0% | |
| !! | ACATTCCAGACTTTGATTTG+TGG | + | chr4_1:20018342-20018361 | Msa0539260:intron | 35.0% |
| !! | ACTTTGATTTGTGGACTACT+TGG | + | chr4_1:20018351-20018370 | Msa0539260:CDS | 35.0% |
| GCTGAGAAAAGATGTTAGTT+TGG | + | chr4_1:20018495-20018514 | Msa0539260:intron | 35.0% | |
| ACAACCAAATGCAACTATGA+AGG | - | chr4_1:20018641-20018660 | None:intergenic | 35.0% | |
| GTAGATGATCAGAAGAAAGA+TGG | + | chr4_1:20018989-20019008 | Msa0539260:intron | 35.0% | |
| GTCTGAAAGTTAACCATGTT+TGG | - | chr4_1:20019522-20019541 | None:intergenic | 35.0% | |
| ! | CTCCTTTATCTTCACCTTTT+AGG | - | chr4_1:20019584-20019603 | None:intergenic | 35.0% |
| CTTTGCTCATTTACTCTAAC+AGG | - | chr4_1:20019654-20019673 | None:intergenic | 35.0% | |
| ! | ATTCCAACTTCTGTTTTGTG+GGG | + | chr4_1:20019741-20019760 | Msa0539260:CDS | 35.0% |
| ATTACCAGGAAGACTATCAA+TGG | - | chr4_1:20019784-20019803 | None:intergenic | 35.0% | |
| TCTTCCTGGTAATCAATTCT+GGG | + | chr4_1:20019791-20019810 | Msa0539260:CDS | 35.0% | |
| TTCTCTTTGTATCACCTAGT+AGG | + | chr4_1:20019826-20019845 | Msa0539260:CDS | 35.0% | |
| TATAACAGTCTGGTACAGTT+CGG | - | chr4_1:20019936-20019955 | None:intergenic | 35.0% | |
| ACTGTACCAGACTGTTATAA+TGG | + | chr4_1:20019937-20019956 | Msa0539260:intron | 35.0% | |
| ACTGAACCATTATAACAGTC+TGG | - | chr4_1:20019946-20019965 | None:intergenic | 35.0% | |
| GTTGCAATTACAACTGTTCA+TGG | - | chr4_1:20019992-20020011 | None:intergenic | 35.0% | |
| ! | CGTATCAATTCGACCTATTT+TGG | + | chr4_1:20020038-20020057 | Msa0539260:intron | 35.0% |
| !!! | TATTTTGGCAGGTTATTGGA+GGG | + | chr4_1:20020053-20020072 | Msa0539260:intron | 35.0% |
| AATTGGTACTGTTTCCACAA+AGG | - | chr4_1:20020090-20020109 | None:intergenic | 35.0% | |
| CTTCCAATGTGTGTATTTCT+TGG | + | chr4_1:20020133-20020152 | Msa0539260:CDS | 35.0% | |
| ! | TCTTTTTACTGATCCTTGTG+AGG | + | chr4_1:20020210-20020229 | Msa0539260:CDS | 35.0% |
| GCTGAATATGAAGAAATTGC+TGG | + | chr4_1:20020287-20020306 | Msa0539260:CDS | 35.0% | |
| CATACACTTAAAGAGAGTCT+TGG | - | chr4_1:20020317-20020336 | None:intergenic | 35.0% | |
| TGTCTATGAAACATAGACAC+TGG | + | chr4_1:20020394-20020413 | Msa0539260:intron | 35.0% | |
| ATTTCCATTGATCCAAAGCT+AGG | - | chr4_1:20020490-20020509 | None:intergenic | 35.0% | |
| GATGAATTAACTACAAGCAG+AGG | + | chr4_1:20020529-20020548 | Msa0539260:CDS | 35.0% | |
| ! | CCTTATTTCCATAAACTCTC+CGG | + | chr4_1:20020763-20020782 | Msa0539260:intron | 35.0% |
| TTGGTCATTAAGGTTCCATT+TGG | - | chr4_1:20020853-20020872 | None:intergenic | 35.0% | |
| AATGATTTCCATTGCATGCA+GGG | + | chr4_1:20020920-20020939 | Msa0539260:intron | 35.0% | |
| CTAAGGACTTGGAGAAAATA+TGG | + | chr4_1:20020995-20021014 | Msa0539260:three_prime_UTR | 35.0% | |
| CTTGGAGAAAATATGGTAAG+TGG | + | chr4_1:20021002-20021021 | Msa0539260:three_prime_UTR | 35.0% | |
| CGCGGATGATACCTAATTTA+CGG | - | chr4_1:20015560-20015579 | None:intergenic | 40.0% | |
| TTAGTCTCTACAGTTATGCG+CGG | - | chr4_1:20015578-20015597 | None:intergenic | 40.0% | |
| ATATGCGGTGGTCCAAAAAT+TGG | - | chr4_1:20015808-20015827 | None:intergenic | 40.0% | |
| ! | TAGAGGTGAAGTGTATTGGT+GGG | - | chr4_1:20015837-20015856 | None:intergenic | 40.0% |
| CATCTAGAGGTGAAGTGTAT+TGG | - | chr4_1:20015841-20015860 | None:intergenic | 40.0% | |
| CTGAAAATTGGAGATGGAGA+AGG | + | chr4_1:20016000-20016019 | Msa0539260:intron | 40.0% | |
| ATTGAGCACAGTAGAAACAC+TGG | + | chr4_1:20016475-20016494 | Msa0539260:CDS | 40.0% | |
| GTTCTGCAACTCCTACAATA+AGG | - | chr4_1:20016553-20016572 | None:intergenic | 40.0% | |
| !! | GTAGGTATACATGATGATGG+TGG | - | chr4_1:20016576-20016595 | None:intergenic | 40.0% |
| ! | CTTGGGACAAGAACTCTTTT+TGG | + | chr4_1:20016625-20016644 | Msa0539260:CDS | 40.0% |
| !!! | GACAAGAACTCTTTTTGGCT+TGG | + | chr4_1:20016630-20016649 | Msa0539260:CDS | 40.0% |
| ACGTCACATAAGTCACGTAA+TGG | - | chr4_1:20016814-20016833 | None:intergenic | 40.0% | |
| ! | AGGGTTGCTGAAGAACTTTT+TGG | + | chr4_1:20017132-20017151 | Msa0539260:CDS | 40.0% |
| CAGAACAGTACCAATTTCAC+TGG | + | chr4_1:20017343-20017362 | Msa0539260:CDS | 40.0% | |
| AGATCTTGGTTATATGGGAC+AGG | + | chr4_1:20017441-20017460 | Msa0539260:CDS | 40.0% | |
| !!! | CTATGGTGTGCCTTTTTTAG+TGG | + | chr4_1:20017790-20017809 | Msa0539260:intron | 40.0% |
| !!! | TGCCTTTTTTAGTGGTGGTA+TGG | + | chr4_1:20017798-20017817 | Msa0539260:intron | 40.0% |
| GTCCATACCACCACTAAAAA+AGG | - | chr4_1:20017803-20017822 | None:intergenic | 40.0% | |
| TCAATTTATGCTGCAGGACA+TGG | + | chr4_1:20018048-20018067 | Msa0539260:intron | 40.0% | |
| CAATTTATGCTGCAGGACAT+GGG | + | chr4_1:20018049-20018068 | Msa0539260:intron | 40.0% | |
| ! | TGCTTTTATTCCTGCCTTGA+TGG | + | chr4_1:20018099-20018118 | Msa0539260:CDS | 40.0% |
| CTTTGATCATAGCGTTGCTT+CGG | + | chr4_1:20018138-20018157 | Msa0539260:CDS | 40.0% | |
| TTTGATCATAGCGTTGCTTC+GGG | + | chr4_1:20018139-20018158 | Msa0539260:CDS | 40.0% | |
| GTAGTCCACAAATCAAAGTC+TGG | - | chr4_1:20018350-20018369 | None:intergenic | 40.0% | |
| CTTGGTTTACCTCCTTCAAA+TGG | + | chr4_1:20018369-20018388 | Msa0539260:CDS | 40.0% | |
| TGAGGAAGAACACCATTTGA+AGG | - | chr4_1:20018384-20018403 | None:intergenic | 40.0% | |
| TTAGTATGCATAGGGGATTG+AGG | - | chr4_1:20018402-20018421 | None:intergenic | 40.0% | |
| AGAGGCTCTTAGTATGCATA+GGG | - | chr4_1:20018410-20018429 | None:intergenic | 40.0% | |
| GAGTCCTTCATAGTTGCATT+TGG | + | chr4_1:20018634-20018653 | Msa0539260:intron | 40.0% | |
| GAACAACTAATTCGGCTCTT+AGG | - | chr4_1:20018897-20018916 | None:intergenic | 40.0% | |
| AAAGATGGTTGAAACTGCCA+AGG | + | chr4_1:20019004-20019023 | Msa0539260:CDS | 40.0% | |
| !! | GCTAGCAACTCTGAAATCTA+TGG | + | chr4_1:20019044-20019063 | Msa0539260:CDS | 40.0% |
| AAAGATGCAAGCAGTGTTTG+TGG | + | chr4_1:20019067-20019086 | Msa0539260:CDS | 40.0% | |
| CAGACACAACACTACACTAT+CGG | + | chr4_1:20019219-20019238 | Msa0539260:intron | 40.0% | |
| TGTCTAATACGGACATGACA+CGG | - | chr4_1:20019289-20019308 | None:intergenic | 40.0% | |
| TATTATAGGTAACGTGACCG+TGG | - | chr4_1:20019391-20019410 | None:intergenic | 40.0% | |
| GGTTAACTTTCAGACTTCTG+TGG | + | chr4_1:20019527-20019546 | Msa0539260:intron | 40.0% | |
| ACTTTCAGACTTCTGTGGAA+AGG | + | chr4_1:20019532-20019551 | Msa0539260:intron | 40.0% | |
| CTTTCAGACTTCTGTGGAAA+GGG | + | chr4_1:20019533-20019552 | Msa0539260:intron | 40.0% | |
| GGAACTAGAGAACCTAAAAG+AGG | + | chr4_1:20019554-20019573 | Msa0539260:CDS | 40.0% | |
| CATGCATCAATATGCTTCTC+AGG | - | chr4_1:20019627-20019646 | None:intergenic | 40.0% | |
| TATCCCCACAAAACAGAAGT+TGG | - | chr4_1:20019747-20019766 | None:intergenic | 40.0% | |
| GTCTTCCTGGTAATCAATTC+TGG | + | chr4_1:20019790-20019809 | Msa0539260:CDS | 40.0% | |
| CTTTCCCAGAATTGATTACC+AGG | - | chr4_1:20019798-20019817 | None:intergenic | 40.0% | |
| ! | CTGGTAATCAATTCTGGGAA+AGG | + | chr4_1:20019796-20019815 | Msa0539260:CDS | 40.0% |
| TCTTTGTATCACCTAGTAGG+TGG | + | chr4_1:20019829-20019848 | Msa0539260:CDS | 40.0% | |
| ACTTACTTGAACCACCTACT+AGG | - | chr4_1:20019843-20019862 | None:intergenic | 40.0% | |
| TGGTTCATCCCAAATTGATG+AGG | - | chr4_1:20019891-20019910 | None:intergenic | 40.0% | |
| GAACTGAACCAGACTGTTAA+TGG | - | chr4_1:20019911-20019930 | None:intergenic | 40.0% | |
| !!! | TCAATTCGACCTATTTTGGC+AGG | + | chr4_1:20020042-20020061 | Msa0539260:intron | 40.0% |
| !!! | GACCTATTTTGGCAGGTTAT+TGG | + | chr4_1:20020049-20020068 | Msa0539260:intron | 40.0% |
| CTCCAATAACCTGCCAAAAT+AGG | - | chr4_1:20020054-20020073 | None:intergenic | 40.0% | |
| !!! | CTATTTTGGCAGGTTATTGG+AGG | + | chr4_1:20020052-20020071 | Msa0539260:intron | 40.0% |
| !!! | TGGTTTGTTTTGGAGTGACA+TGG | + | chr4_1:20020153-20020172 | Msa0539260:CDS | 40.0% |
| GGAAACAAGATTCCAGCTAT+TGG | - | chr4_1:20020182-20020201 | None:intergenic | 40.0% | |
| ATGAAACATAGACACTGGCA+CGG | + | chr4_1:20020399-20020418 | Msa0539260:intron | 40.0% | |
| GGAACACGACACTAATAATC+TGG | + | chr4_1:20020420-20020439 | Msa0539260:intron | 40.0% | |
| ! | CAAATGGATTCACCTAGCTT+TGG | + | chr4_1:20020475-20020494 | Msa0539260:CDS | 40.0% |
| !! | TTCACCTAGCTTTGGATCAA+TGG | + | chr4_1:20020483-20020502 | Msa0539260:CDS | 40.0% |
| CAGAACTTTAAGCTTCAGAG+AGG | + | chr4_1:20020564-20020583 | Msa0539260:CDS | 40.0% | |
| GAAAGACATGGTCAAGTAAG+TGG | + | chr4_1:20020586-20020605 | Msa0539260:intron | 40.0% | |
| CCGGAGAGTTTATGGAAATA+AGG | - | chr4_1:20020766-20020785 | None:intergenic | 40.0% | |
| TTCCATAAACTCTCCGGAAT+AGG | + | chr4_1:20020769-20020788 | Msa0539260:intron | 40.0% | |
| AACCTATTCCGGAGAGTTTA+TGG | - | chr4_1:20020774-20020793 | None:intergenic | 40.0% | |
| CAATGATTTCCATTGCATGC+AGG | + | chr4_1:20020919-20020938 | Msa0539260:intron | 40.0% | |
| CAAATAGCTAGCTAAGGACT+TGG | + | chr4_1:20020984-20021003 | Msa0539260:exon | 40.0% | |
| TGTGCTTTCCGTTCTGGTAT+TGG | + | chr4_1:20015300-20015319 | Msa0539260:CDS | 45.0% | |
| GTGCTTTCCGTTCTGGTATT+GGG | + | chr4_1:20015301-20015320 | Msa0539260:CDS | 45.0% | |
| GCTTTGCCTGTTATTGCCTT+TGG | + | chr4_1:20015475-20015494 | Msa0539260:CDS | 45.0% | |
| TGCTCACCAAAGGCAATAAC+AGG | - | chr4_1:20015484-20015503 | None:intergenic | 45.0% | |
| ATGCAGCAGCAGAAGCAAAA+AGG | - | chr4_1:20015679-20015698 | None:intergenic | 45.0% | |
| !! | ATTGGTGGGCTAGACATATG+CGG | - | chr4_1:20015823-20015842 | None:intergenic | 45.0% |
| CTAGAGGTGAAGTGTATTGG+TGG | - | chr4_1:20015838-20015857 | None:intergenic | 45.0% | |
| CTGGCTTCTACAGCTATTTG+TGG | + | chr4_1:20016494-20016513 | Msa0539260:CDS | 45.0% | |
| CTCCTACAATAAGGAGTGGT+TGG | - | chr4_1:20016544-20016563 | None:intergenic | 45.0% | |
| GCAACTCCTACAATAAGGAG+TGG | - | chr4_1:20016548-20016567 | None:intergenic | 45.0% | |
| AGAGCAGAAGAGCAAGATCT+TGG | + | chr4_1:20017427-20017446 | Msa0539260:CDS | 45.0% | |
| TGTCAGACACTTACACGTGT+CGG | - | chr4_1:20017572-20017591 | None:intergenic | 45.0% | |
| !!! | TGGTGTGCCTTTTTTAGTGG+TGG | + | chr4_1:20017793-20017812 | Msa0539260:intron | 45.0% |
| !! | AGAGGAGCAACTAGTCTTCT+TGG | - | chr4_1:20017869-20017888 | None:intergenic | 45.0% |
| ! | ACTAGTTGCTCCTCTAGCTT+GGG | + | chr4_1:20017874-20017893 | Msa0539260:CDS | 45.0% |
| GATGTAGATTCCCAAGCTAG+AGG | - | chr4_1:20017887-20017906 | None:intergenic | 45.0% | |
| TTGATCATAGCGTTGCTTCG+GGG | + | chr4_1:20018140-20018159 | Msa0539260:CDS | 45.0% | |
| GGAAGAACACCATTTGAAGG+AGG | - | chr4_1:20018381-20018400 | None:intergenic | 45.0% | |
| GAGGCTCTTAGTATGCATAG+GGG | - | chr4_1:20018409-20018428 | None:intergenic | 45.0% | |
| GAGAGGCTCTTAGTATGCAT+AGG | - | chr4_1:20018411-20018430 | None:intergenic | 45.0% | |
| TAAGAGCCTCTCAGTTCTCA+AGG | + | chr4_1:20018419-20018438 | Msa0539260:CDS | 45.0% | |
| AAGAGCCTCTCAGTTCTCAA+GGG | + | chr4_1:20018420-20018439 | Msa0539260:CDS | 45.0% | |
| ! | TCAGTTCTCAAGGGTTTGGT+AGG | + | chr4_1:20018429-20018448 | Msa0539260:intron | 45.0% |
| CTTTCATACTAGCAGCAGAG+TGG | - | chr4_1:20018807-20018826 | None:intergenic | 45.0% | |
| GCAAGCAGTGTTTGTGGAAA+TGG | + | chr4_1:20019073-20019092 | Msa0539260:CDS | 45.0% | |
| GTGGGGATACTTTGCATACA+TGG | + | chr4_1:20019758-20019777 | Msa0539260:CDS | 45.0% | |
| ! | ATGGCCATTGATAGTCTTCC+TGG | + | chr4_1:20019777-20019796 | Msa0539260:CDS | 45.0% |
| GGGATGAACCATTAACAGTC+TGG | + | chr4_1:20019900-20019919 | Msa0539260:intron | 45.0% | |
| GTGACATGGATTCCAATAGC+TGG | + | chr4_1:20020167-20020186 | Msa0539260:CDS | 45.0% | |
| TGGTGAGGACTAAAGAGCTT+GGG | - | chr4_1:20020248-20020267 | None:intergenic | 45.0% | |
| !! | TCTAGCTCTTTAAGGTGGTG+AGG | - | chr4_1:20020263-20020282 | None:intergenic | 45.0% |
| !! | CTGCATCTAGCTCTTTAAGG+TGG | - | chr4_1:20020268-20020287 | None:intergenic | 45.0% |
| !! | CAGCTGCATCTAGCTCTTTA+AGG | - | chr4_1:20020271-20020290 | None:intergenic | 45.0% |
| AGCTTCAGAGAGGAAAGACA+TGG | + | chr4_1:20020574-20020593 | Msa0539260:CDS | 45.0% | |
| GATAGATTCCCTGCATGCAA+TGG | - | chr4_1:20020931-20020950 | None:intergenic | 45.0% | |
| !! | AAAAAAAAATTCAAATAAAA+CGG | - | chr4_1:20016945-20016964 | None:intergenic | 5.0% |
| !!! | ATTTTTTTTCTAATTATTAT+AGG | - | chr4_1:20019405-20019424 | None:intergenic | 5.0% |
| !! | TATAATAATTAGAAAAAAAA+TGG | + | chr4_1:20019404-20019423 | Msa0539260:intron | 5.0% |
| !!! | TTTTTATTTTTAAAAAAAGT+TGG | + | chr4_1:20020878-20020897 | Msa0539260:intron | 5.0% |
| TGGACTTGTGCTTTCCGTTC+TGG | + | chr4_1:20015294-20015313 | Msa0539260:CDS | 50.0% | |
| TCGATTCAGCTGCTCACCAA+AGG | - | chr4_1:20015494-20015513 | None:intergenic | 50.0% | |
| TGCGGTGGTCCAAAAATTGG+TGG | - | chr4_1:20015805-20015824 | None:intergenic | 50.0% | |
| GGCCAACCACTCCTTATTGT+AGG | + | chr4_1:20016539-20016558 | Msa0539260:CDS | 50.0% | |
| !!! | GAACTCTTTTTGGCTTGGGC+TGG | + | chr4_1:20016635-20016654 | Msa0539260:CDS | 50.0% |
| !!! | TCTTTTTGGCTTGGGCTGGA+TGG | + | chr4_1:20016639-20016658 | Msa0539260:CDS | 50.0% |
| ! | GACTAGTTGCTCCTCTAGCT+TGG | + | chr4_1:20017873-20017892 | Msa0539260:CDS | 50.0% |
| TTATGCTGCAGGACATGGGA+AGG | + | chr4_1:20018053-20018072 | Msa0539260:intron | 50.0% | |
| TATGCTGCAGGACATGGGAA+GGG | + | chr4_1:20018054-20018073 | Msa0539260:intron | 50.0% | |
| ! | ATTCCTGCCTTGATGGTAGC+AGG | + | chr4_1:20018106-20018125 | Msa0539260:CDS | 50.0% |
| ! | TTCCTGCCTTGATGGTAGCA+GGG | + | chr4_1:20018107-20018126 | Msa0539260:CDS | 50.0% |
| GTAAAGCCCTGCTACCATCA+AGG | - | chr4_1:20018116-20018135 | None:intergenic | 50.0% | |
| CCAAACCCTTGAGAACTGAG+AGG | - | chr4_1:20018428-20018447 | None:intergenic | 50.0% | |
| CCTCTCAGTTCTCAAGGGTT+TGG | + | chr4_1:20018425-20018444 | Msa0539260:CDS | 50.0% | |
| ACACAGACACGACACAACCA+CGG | + | chr4_1:20019371-20019390 | Msa0539260:intron | 50.0% | |
| CAACACGACACTGACACATG+TGG | - | chr4_1:20019446-20019465 | None:intergenic | 50.0% | |
| CACATGTGTCAGTGTCGTGT+TGG | + | chr4_1:20019444-20019463 | Msa0539260:intron | 50.0% | |
| GGAGGATATACTGCCTCACA+AGG | - | chr4_1:20020226-20020245 | None:intergenic | 50.0% | |
| GGTGAGGACTAAAGAGCTTG+GGG | - | chr4_1:20020247-20020266 | None:intergenic | 50.0% | |
| GTGGTGAGGACTAAAGAGCT+TGG | - | chr4_1:20020249-20020268 | None:intergenic | 50.0% | |
| GAGCAGCTGAATCGAGACAC+AGG | + | chr4_1:20015499-20015518 | Msa0539260:CDS | 55.0% | |
| TCATAGCGTTGCTTCGGGGA+TGG | + | chr4_1:20018144-20018163 | Msa0539260:CDS | 55.0% | |
| GTGGTTGTGTCGTGTCTGTG+TGG | - | chr4_1:20019372-20019391 | None:intergenic | 55.0% | |
| GAGGACTAAAGAGCTTGGGG+AGG | - | chr4_1:20020244-20020263 | None:intergenic | 55.0% | |
| !! | GGTGGGCTAGACATATGCGG+TGG | - | chr4_1:20015820-20015839 | None:intergenic | 60.0% |
| AGCCCTGCTACCATCAAGGC+AGG | - | chr4_1:20018112-20018131 | None:intergenic | 60.0% | |
| TTCGGGGATGGCACAGCAGA+AGG | + | chr4_1:20018156-20018175 | Msa0539260:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 20015081 | 20021077 | 20015081 | ID=Msa0539260;Name=Msa0539260 |
| chr4_1 | mRNA | 20015081 | 20021077 | 20015081 | ID=Msa0539260-mRNA-1;Parent=Msa0539260;Name=Msa0539260-mRNA-1;_AED=0.09;_eAED=0.09;_QI=27|0.84|0.71|1|1|0.92|14|83|645 |
| chr4_1 | exon | 20015081 | 20015091 | 20015081 | ID=Msa0539260-mRNA-1:exon:5738;Parent=Msa0539260-mRNA-1 |
| chr4_1 | exon | 20015194 | 20015322 | 20015194 | ID=Msa0539260-mRNA-1:exon:5739;Parent=Msa0539260-mRNA-1 |
| chr4_1 | exon | 20015438 | 20015520 | 20015438 | ID=Msa0539260-mRNA-1:exon:5740;Parent=Msa0539260-mRNA-1 |
| chr4_1 | exon | 20016468 | 20016660 | 20016468 | ID=Msa0539260-mRNA-1:exon:5741;Parent=Msa0539260-mRNA-1 |
| chr4_1 | exon | 20017056 | 20017194 | 20017056 | ID=Msa0539260-mRNA-1:exon:5742;Parent=Msa0539260-mRNA-1 |
| chr4_1 | exon | 20017297 | 20017462 | 20017297 | ID=Msa0539260-mRNA-1:exon:5743;Parent=Msa0539260-mRNA-1 |
| chr4_1 | exon | 20017840 | 20017931 | 20017840 | ID=Msa0539260-mRNA-1:exon:5744;Parent=Msa0539260-mRNA-1 |
| chr4_1 | exon | 20018064 | 20018237 | 20018064 | ID=Msa0539260-mRNA-1:exon:5745;Parent=Msa0539260-mRNA-1 |
| chr4_1 | exon | 20018351 | 20018446 | 20018351 | ID=Msa0539260-mRNA-1:exon:5746;Parent=Msa0539260-mRNA-1 |
| chr4_1 | exon | 20018993 | 20019109 | 20018993 | ID=Msa0539260-mRNA-1:exon:5747;Parent=Msa0539260-mRNA-1 |
| chr4_1 | exon | 20019540 | 20019856 | 20019540 | ID=Msa0539260-mRNA-1:exon:5748;Parent=Msa0539260-mRNA-1 |
| chr4_1 | exon | 20020064 | 20020331 | 20020064 | ID=Msa0539260-mRNA-1:exon:5749;Parent=Msa0539260-mRNA-1 |
| chr4_1 | exon | 20020475 | 20020600 | 20020475 | ID=Msa0539260-mRNA-1:exon:5750;Parent=Msa0539260-mRNA-1 |
| chr4_1 | exon | 20020941 | 20021077 | 20020941 | ID=Msa0539260-mRNA-1:exon:5751;Parent=Msa0539260-mRNA-1 |
| chr4_1 | five_prime_UTR | 20015081 | 20015091 | 20015081 | ID=Msa0539260-mRNA-1:five_prime_utr;Parent=Msa0539260-mRNA-1 |
| chr4_1 | five_prime_UTR | 20015194 | 20015209 | 20015194 | ID=Msa0539260-mRNA-1:five_prime_utr;Parent=Msa0539260-mRNA-1 |
| chr4_1 | CDS | 20015210 | 20015322 | 20015210 | ID=Msa0539260-mRNA-1:cds;Parent=Msa0539260-mRNA-1 |
| chr4_1 | CDS | 20015438 | 20015520 | 20015438 | ID=Msa0539260-mRNA-1:cds;Parent=Msa0539260-mRNA-1 |
| chr4_1 | CDS | 20016468 | 20016660 | 20016468 | ID=Msa0539260-mRNA-1:cds;Parent=Msa0539260-mRNA-1 |
| chr4_1 | CDS | 20017056 | 20017194 | 20017056 | ID=Msa0539260-mRNA-1:cds;Parent=Msa0539260-mRNA-1 |
| chr4_1 | CDS | 20017297 | 20017462 | 20017297 | ID=Msa0539260-mRNA-1:cds;Parent=Msa0539260-mRNA-1 |
| chr4_1 | CDS | 20017840 | 20017931 | 20017840 | ID=Msa0539260-mRNA-1:cds;Parent=Msa0539260-mRNA-1 |
| chr4_1 | CDS | 20018064 | 20018237 | 20018064 | ID=Msa0539260-mRNA-1:cds;Parent=Msa0539260-mRNA-1 |
| chr4_1 | CDS | 20018351 | 20018446 | 20018351 | ID=Msa0539260-mRNA-1:cds;Parent=Msa0539260-mRNA-1 |
| chr4_1 | CDS | 20018993 | 20019109 | 20018993 | ID=Msa0539260-mRNA-1:cds;Parent=Msa0539260-mRNA-1 |
| chr4_1 | CDS | 20019540 | 20019856 | 20019540 | ID=Msa0539260-mRNA-1:cds;Parent=Msa0539260-mRNA-1 |
| chr4_1 | CDS | 20020064 | 20020331 | 20020064 | ID=Msa0539260-mRNA-1:cds;Parent=Msa0539260-mRNA-1 |
| chr4_1 | CDS | 20020475 | 20020600 | 20020475 | ID=Msa0539260-mRNA-1:cds;Parent=Msa0539260-mRNA-1 |
| chr4_1 | CDS | 20020941 | 20020994 | 20020941 | ID=Msa0539260-mRNA-1:cds;Parent=Msa0539260-mRNA-1 |
| chr4_1 | three_prime_UTR | 20020995 | 20021077 | 20020995 | ID=Msa0539260-mRNA-1:three_prime_utr;Parent=Msa0539260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
