AlfalfaGEDB | MS.gene68129

M. sativa cultivar XinJiangDaYe / MS.gene68129

KEGG: K02906
GO: GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0019538 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0071704 GO:0110165 GO:1901564 GO:1901566 GO:1901576
PFAM: PF00297.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68129.t1	XP_003604074.1	99.6	226	1	0	1	226	47	272	2.00E-122	448.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68129.t1	O80360	87.5	224	28	0	3	226	36	259	3.2e-108	392.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68129.t1	G7J8L6	99.6	226	1	0	1	226	47	272	1.5e-122	448.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene68129	0.833893	4.11E-56	-1.69E-46
MS.gene049171	MS.gene68129	0.80912	2.21E-50	-1.69E-46
MS.gene049173	MS.gene68129	0.805729	1.16E-49	-1.69E-46
MS.gene049217	MS.gene68129	0.815635	8.36E-52	-1.69E-46
MS.gene049222	MS.gene68129	0.819156	1.35E-52	-1.69E-46
MS.gene049285	MS.gene68129	0.827849	1.25E-54	-1.69E-46
MS.gene049320	MS.gene68129	0.80427	2.34E-49	-1.69E-46
MS.gene049351	MS.gene68129	0.837083	6.41E-57	-1.69E-46
MS.gene049356	MS.gene68129	0.805265	1.45E-49	-1.69E-46
MS.gene049369	MS.gene68129	0.81818	2.24E-52	-1.69E-46
MS.gene049389	MS.gene68129	0.823375	1.43E-53	-1.69E-46
MS.gene049427	MS.gene68129	0.895577	8.40E-76	-1.69E-46
MS.gene049491	MS.gene68129	0.836367	9.76E-57	-1.69E-46
MS.gene049609	MS.gene68129	0.868178	7.92E-66	-1.69E-46
MS.gene049614	MS.gene68129	0.838653	2.53E-57	-1.69E-46
MS.gene049661	MS.gene68129	0.850646	1.48E-60	-1.69E-46
MS.gene049662	MS.gene68129	0.845169	4.80E-59	-1.69E-46
MS.gene049758	MS.gene68129	0.807541	4.81E-50	-1.69E-46
MS.gene049760	MS.gene68129	0.842703	2.20E-58	-1.69E-46
MS.gene049805	MS.gene68129	0.885223	9.78E-72	-1.69E-46
MS.gene050076	MS.gene68129	0.850523	1.61E-60	-1.69E-46
MS.gene050099	MS.gene68129	0.804568	2.03E-49	-1.69E-46
MS.gene050163	MS.gene68129	0.828828	7.23E-55	-1.69E-46
MS.gene050165	MS.gene68129	0.800657	1.30E-48	-1.69E-46
MS.gene050301	MS.gene68129	0.867903	9.71E-66	-1.69E-46
MS.gene050333	MS.gene68129	0.820951	5.23E-53	-1.69E-46
MS.gene050397	MS.gene68129	0.827706	1.35E-54	-1.69E-46
MS.gene050406	MS.gene68129	0.808482	3.03E-50	-1.69E-46
MS.gene050432	MS.gene68129	0.869668	2.61E-66	-1.69E-46
MS.gene050464	MS.gene68129	0.844501	7.27E-59	-1.69E-46
MS.gene050518	MS.gene68129	0.803001	4.29E-49	-1.69E-46
MS.gene050529	MS.gene68129	0.856848	2.44E-62	-1.69E-46
MS.gene05053	MS.gene68129	0.800917	1.15E-48	-1.69E-46
MS.gene050593	MS.gene68129	0.88093	3.66E-70	-1.69E-46
MS.gene050670	MS.gene68129	0.885615	6.98E-72	-1.69E-46
MS.gene050675	MS.gene68129	0.802539	5.35E-49	-1.69E-46
MS.gene050686	MS.gene68129	0.806029	1.00E-49	-1.69E-46
MS.gene050747	MS.gene68129	0.829102	6.21E-55	-1.69E-46
MS.gene050767	MS.gene68129	0.904178	1.61E-79	-1.69E-46
MS.gene050770	MS.gene68129	0.906452	1.46E-80	-1.69E-46
MS.gene050772	MS.gene68129	0.874099	8.80E-68	-1.69E-46
MS.gene050783	MS.gene68129	0.821228	4.51E-53	-1.69E-46
MS.gene05080	MS.gene68129	0.812189	4.81E-51	-1.69E-46
MS.gene050812	MS.gene68129	0.831778	1.38E-55	-1.69E-46
MS.gene050950	MS.gene68129	0.829137	6.09E-55	-1.69E-46
MS.gene05100	MS.gene68129	0.80702	6.20E-50	-1.69E-46
MS.gene05101	MS.gene68129	0.889219	2.95E-73	-1.69E-46
MS.gene05105	MS.gene68129	0.898182	6.82E-77	-1.69E-46
MS.gene051228	MS.gene68129	0.8554	6.47E-62	-1.69E-46
MS.gene051387	MS.gene68129	0.875929	2.09E-68	-1.69E-46
MS.gene051434	MS.gene68129	0.800959	1.13E-48	-1.69E-46
MS.gene051471	MS.gene68129	0.849987	2.27E-60	-1.69E-46
MS.gene051582	MS.gene68129	0.829666	4.53E-55	-1.69E-46
MS.gene051666	MS.gene68129	0.87986	8.82E-70	-1.69E-46
MS.gene051692	MS.gene68129	0.822482	2.31E-53	-1.69E-46
MS.gene051694	MS.gene68129	0.816498	5.36E-52	-1.69E-46
MS.gene051810	MS.gene68129	0.824235	9.01E-54	-1.69E-46
MS.gene051858	MS.gene68129	0.840242	9.79E-58	-1.69E-46
MS.gene051877	MS.gene68129	0.80524	1.47E-49	-1.69E-46
MS.gene052078	MS.gene68129	0.873806	1.10E-67	-1.69E-46
MS.gene052178	MS.gene68129	0.801477	8.84E-49	-1.69E-46
MS.gene052188	MS.gene68129	0.864123	1.52E-64	-1.69E-46
MS.gene052253	MS.gene68129	0.809428	1.90E-50	-1.69E-46
MS.gene052271	MS.gene68129	0.858694	6.91E-63	-1.69E-46
MS.gene052290	MS.gene68129	0.845082	5.07E-59	-1.69E-46
MS.gene052293	MS.gene68129	0.810345	1.21E-50	-1.69E-46
MS.gene052310	MS.gene68129	0.9117	4.52E-83	-1.69E-46
MS.gene052322	MS.gene68129	0.843245	1.58E-58	-1.69E-46
MS.gene052326	MS.gene68129	0.842732	2.16E-58	-1.69E-46
MS.gene052340	MS.gene68129	0.839478	1.55E-57	-1.69E-46
MS.gene052379	MS.gene68129	0.860369	2.17E-63	-1.69E-46
MS.gene052421	MS.gene68129	0.871356	7.28E-67	-1.69E-46
MS.gene052481	MS.gene68129	0.850827	1.32E-60	-1.69E-46
MS.gene052484	MS.gene68129	0.864142	1.50E-64	-1.69E-46
MS.gene052485	MS.gene68129	0.840828	6.87E-58	-1.69E-46
MS.gene052508	MS.gene68129	0.80384	2.88E-49	-1.69E-46
MS.gene052510	MS.gene68129	0.802157	6.41E-49	-1.69E-46
MS.gene052615	MS.gene68129	0.847989	8.16E-60	-1.69E-46
MS.gene052870	MS.gene68129	0.815594	8.53E-52	-1.69E-46
MS.gene052872	MS.gene68129	0.806116	9.62E-50	-1.69E-46
MS.gene052916	MS.gene68129	0.815841	7.52E-52	-1.69E-46
MS.gene052982	MS.gene68129	0.806178	9.33E-50	-1.69E-46
MS.gene053009	MS.gene68129	0.883999	2.79E-71	-1.69E-46
MS.gene053103	MS.gene68129	0.882136	1.34E-70	-1.69E-46
MS.gene053104	MS.gene68129	0.879028	1.74E-69	-1.69E-46
MS.gene053107	MS.gene68129	0.834716	2.55E-56	-1.69E-46
MS.gene053207	MS.gene68129	0.855821	4.88E-62	-1.69E-46
MS.gene053209	MS.gene68129	0.876098	1.83E-68	-1.69E-46
MS.gene053213	MS.gene68129	0.850201	1.98E-60	-1.69E-46
MS.gene053286	MS.gene68129	0.836528	8.88E-57	-1.69E-46
MS.gene053322	MS.gene68129	0.919519	4.07E-87	-1.69E-46
MS.gene053384	MS.gene68129	0.830306	3.16E-55	-1.69E-46
MS.gene053449	MS.gene68129	0.82132	4.30E-53	-1.69E-46
MS.gene053557	MS.gene68129	0.821682	3.55E-53	-1.69E-46
MS.gene053574	MS.gene68129	0.835362	1.75E-56	-1.69E-46
MS.gene053579	MS.gene68129	0.800448	1.43E-48	-1.69E-46
MS.gene053632	MS.gene68129	0.824773	6.73E-54	-1.69E-46
MS.gene053758	MS.gene68129	0.804609	1.99E-49	-1.69E-46
MS.gene053813	MS.gene68129	0.826834	2.18E-54	-1.69E-46
MS.gene053912	MS.gene68129	0.81646	5.47E-52	-1.69E-46
MS.gene053916	MS.gene68129	0.825568	4.37E-54	-1.69E-46
MS.gene054123	MS.gene68129	0.841875	3.64E-58	-1.69E-46
MS.gene054376	MS.gene68129	0.909691	4.31E-82	-1.69E-46
MS.gene05455	MS.gene68129	0.819229	1.30E-52	-1.69E-46
MS.gene054600	MS.gene68129	0.818741	1.67E-52	-1.69E-46
MS.gene054642	MS.gene68129	0.853156	2.88E-61	-1.69E-46
MS.gene054802	MS.gene68129	0.875247	3.58E-68	-1.69E-46
MS.gene054803	MS.gene68129	0.873283	1.66E-67	-1.69E-46
MS.gene054804	MS.gene68129	0.878351	3.01E-69	-1.69E-46
MS.gene054927	MS.gene68129	0.802702	4.95E-49	-1.69E-46
MS.gene054955	MS.gene68129	0.835381	1.73E-56	-1.69E-46
MS.gene05505	MS.gene68129	0.873901	1.03E-67	-1.69E-46
MS.gene055116	MS.gene68129	0.876968	9.15E-69	-1.69E-46
MS.gene055206	MS.gene68129	0.841928	3.53E-58	-1.69E-46
MS.gene055224	MS.gene68129	0.801399	9.17E-49	-1.69E-46
MS.gene055254	MS.gene68129	0.840156	1.03E-57	-1.69E-46
MS.gene055277	MS.gene68129	0.867778	1.06E-65	-1.69E-46
MS.gene055289	MS.gene68129	0.803603	3.22E-49	-1.69E-46
MS.gene055390	MS.gene68129	0.82356	1.30E-53	-1.69E-46
MS.gene055397	MS.gene68129	0.885698	6.50E-72	-1.69E-46
MS.gene055412	MS.gene68129	0.86136	1.08E-63	-1.69E-46
MS.gene055422	MS.gene68129	0.851907	6.54E-61	-1.69E-46
MS.gene055428	MS.gene68129	0.817109	3.91E-52	-1.69E-46
MS.gene055499	MS.gene68129	0.882279	1.19E-70	-1.69E-46
MS.gene055502	MS.gene68129	0.812854	3.44E-51	-1.69E-46
MS.gene055536	MS.gene68129	-0.802322	5.93E-49	-1.69E-46
MS.gene055577	MS.gene68129	0.806751	7.06E-50	-1.69E-46
MS.gene055636	MS.gene68129	0.828636	8.05E-55	-1.69E-46
MS.gene055638	MS.gene68129	0.800298	1.54E-48	-1.69E-46
MS.gene055647	MS.gene68129	0.886339	3.73E-72	-1.69E-46
MS.gene055722	MS.gene68129	0.870758	1.15E-66	-1.69E-46
MS.gene055896	MS.gene68129	0.829643	4.59E-55	-1.69E-46
MS.gene05592	MS.gene68129	0.904203	1.57E-79	-1.69E-46
MS.gene055941	MS.gene68129	0.832236	1.06E-55	-1.69E-46
MS.gene05602	MS.gene68129	0.80285	4.61E-49	-1.69E-46
MS.gene056083	MS.gene68129	0.85433	1.32E-61	-1.69E-46
MS.gene056191	MS.gene68129	0.829835	4.12E-55	-1.69E-46
MS.gene056374	MS.gene68129	0.841316	5.12E-58	-1.69E-46
MS.gene056407	MS.gene68129	0.86729	1.53E-65	-1.69E-46
MS.gene056410	MS.gene68129	0.84526	4.54E-59	-1.69E-46
MS.gene056422	MS.gene68129	0.806098	9.70E-50	-1.69E-46
MS.gene056511	MS.gene68129	0.84717	1.37E-59	-1.69E-46
MS.gene056609	MS.gene68129	0.876844	1.01E-68	-1.69E-46
MS.gene056612	MS.gene68129	0.821208	4.56E-53	-1.69E-46
MS.gene056657	MS.gene68129	0.807714	4.42E-50	-1.69E-46
MS.gene056796	MS.gene68129	0.847771	9.36E-60	-1.69E-46
MS.gene056897	MS.gene68129	0.883047	6.24E-71	-1.69E-46
MS.gene057011	MS.gene68129	0.899043	2.93E-77	-1.69E-46
MS.gene05702	MS.gene68129	0.825421	4.73E-54	-1.69E-46
MS.gene057076	MS.gene68129	0.827208	1.78E-54	-1.69E-46
MS.gene057123	MS.gene68129	0.853752	1.94E-61	-1.69E-46
MS.gene057124	MS.gene68129	0.853725	1.98E-61	-1.69E-46
MS.gene057129	MS.gene68129	0.905374	4.59E-80	-1.69E-46
MS.gene057146	MS.gene68129	0.871391	7.08E-67	-1.69E-46
MS.gene057295	MS.gene68129	0.842102	3.17E-58	-1.69E-46
MS.gene057331	MS.gene68129	0.882675	8.54E-71	-1.69E-46
MS.gene05735	MS.gene68129	0.835276	1.84E-56	-1.69E-46
MS.gene057416	MS.gene68129	0.895481	9.20E-76	-1.69E-46
MS.gene057448	MS.gene68129	0.821171	4.65E-53	-1.69E-46
MS.gene057449	MS.gene68129	0.817535	3.14E-52	-1.69E-46
MS.gene057450	MS.gene68129	0.830331	3.12E-55	-1.69E-46
MS.gene057749	MS.gene68129	0.804067	2.58E-49	-1.69E-46
MS.gene057823	MS.gene68129	0.802998	4.30E-49	-1.69E-46
MS.gene058002	MS.gene68129	0.820026	8.52E-53	-1.69E-46
MS.gene058006	MS.gene68129	0.829965	3.83E-55	-1.69E-46
MS.gene058019	MS.gene68129	0.876984	9.04E-69	-1.69E-46
MS.gene058082	MS.gene68129	0.850528	1.60E-60	-1.69E-46
MS.gene05811	MS.gene68129	0.814438	1.54E-51	-1.69E-46
MS.gene058130	MS.gene68129	0.820765	5.77E-53	-1.69E-46
MS.gene058233	MS.gene68129	0.840399	8.90E-58	-1.69E-46
MS.gene058276	MS.gene68129	0.805832	1.10E-49	-1.69E-46
MS.gene058293	MS.gene68129	0.911173	8.20E-83	-1.69E-46
MS.gene058323	MS.gene68129	0.860911	1.48E-63	-1.69E-46
MS.gene058365	MS.gene68129	0.824674	7.10E-54	-1.69E-46
MS.gene058419	MS.gene68129	0.834472	2.94E-56	-1.69E-46
MS.gene058544	MS.gene68129	0.809754	1.62E-50	-1.69E-46
MS.gene058660	MS.gene68129	0.909202	7.39E-82	-1.69E-46
MS.gene058700	MS.gene68129	0.823085	1.67E-53	-1.69E-46
MS.gene058723	MS.gene68129	0.827821	1.27E-54	-1.69E-46
MS.gene058748	MS.gene68129	0.800612	1.33E-48	-1.69E-46
MS.gene058773	MS.gene68129	0.80741	5.12E-50	-1.69E-46
MS.gene058787	MS.gene68129	0.832243	1.06E-55	-1.69E-46
MS.gene05883	MS.gene68129	0.823121	1.64E-53	-1.69E-46
MS.gene05886	MS.gene68129	0.8014	9.17E-49	-1.69E-46
MS.gene058928	MS.gene68129	0.843045	1.78E-58	-1.69E-46
MS.gene058993	MS.gene68129	0.828943	6.79E-55	-1.69E-46
MS.gene059029	MS.gene68129	0.849985	2.28E-60	-1.69E-46
MS.gene05907	MS.gene68129	0.844657	6.60E-59	-1.69E-46
MS.gene059326	MS.gene68129	0.868999	4.30E-66	-1.69E-46
MS.gene059342	MS.gene68129	0.814658	1.38E-51	-1.69E-46
MS.gene05934	MS.gene68129	0.83386	4.18E-56	-1.69E-46
MS.gene059366	MS.gene68129	0.843264	1.56E-58	-1.69E-46
MS.gene059518	MS.gene68129	0.804038	2.62E-49	-1.69E-46
MS.gene059536	MS.gene68129	0.915708	4.27E-85	-1.69E-46
MS.gene059597	MS.gene68129	0.84966	2.80E-60	-1.69E-46
MS.gene05959	MS.gene68129	0.833866	4.17E-56	-1.69E-46
MS.gene059676	MS.gene68129	0.903295	4.02E-79	-1.69E-46
MS.gene059677	MS.gene68129	0.808178	3.52E-50	-1.69E-46
MS.gene059688	MS.gene68129	0.911518	5.56E-83	-1.69E-46
MS.gene059692	MS.gene68129	0.911082	9.09E-83	-1.69E-46
MS.gene059695	MS.gene68129	0.914465	1.86E-84	-1.69E-46
MS.gene059711	MS.gene68129	0.835225	1.90E-56	-1.69E-46
MS.gene059718	MS.gene68129	0.842012	3.35E-58	-1.69E-46
MS.gene05984	MS.gene68129	0.80836	3.22E-50	-1.69E-46
MS.gene059894	MS.gene68129	0.836801	7.56E-57	-1.69E-46
MS.gene059902	MS.gene68129	0.840934	6.45E-58	-1.69E-46
MS.gene059960	MS.gene68129	0.931632	2.84E-94	-1.69E-46
MS.gene059974	MS.gene68129	0.815011	1.15E-51	-1.69E-46
MS.gene060193	MS.gene68129	0.844334	8.06E-59	-1.69E-46
MS.gene06037	MS.gene68129	0.807222	5.62E-50	-1.69E-46
MS.gene060403	MS.gene68129	0.847877	8.76E-60	-1.69E-46
MS.gene060407	MS.gene68129	0.801857	7.39E-49	-1.69E-46
MS.gene060804	MS.gene68129	0.88567	6.65E-72	-1.69E-46
MS.gene060818	MS.gene68129	0.880083	7.35E-70	-1.69E-46
MS.gene060835	MS.gene68129	0.833078	6.56E-56	-1.69E-46
MS.gene060837	MS.gene68129	0.84966	2.80E-60	-1.69E-46
MS.gene06090	MS.gene68129	0.800707	1.27E-48	-1.69E-46
MS.gene06092	MS.gene68129	0.852731	3.81E-61	-1.69E-46
MS.gene061041	MS.gene68129	0.863703	2.06E-64	-1.69E-46
MS.gene061049	MS.gene68129	0.838489	2.79E-57	-1.69E-46
MS.gene061051	MS.gene68129	-0.875586	2.74E-68	-1.69E-46
MS.gene061150	MS.gene68129	0.857014	2.18E-62	-1.69E-46
MS.gene061154	MS.gene68129	0.82684	2.17E-54	-1.69E-46
MS.gene061200	MS.gene68129	0.913289	7.31E-84	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68129.t1	MTR_3g118210	99.558	226	1	0	1	226	47	272	9.90e-165	455
MS.gene68129.t1	MTR_6g006970	42.718	206	114	4	12	216	49	251	9.85e-47	156
MS.gene68129.t1	MTR_1g093060	40.777	206	118	4	12	216	102	304	1.06e-42	147

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68129.t1	AT2G43030	82.743	226	39	0	1	226	46	271	4.47e-130	368
MS.gene68129.t1	AT3G17465	37.037	216	133	3	11	225	77	290	2.47e-38	135

Find 78 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTAACAATCTTAAGCTTTC+TGG	0.097361	3.1:-92911851	None:intergenic
AAAGAGACTAATTAATTCTT+TGG	0.209215	3.1:-92911976	None:intergenic
AAAGCTCATCATTCCCAATT+TGG	0.228676	3.1:-92911261	None:intergenic
CAAATTGACCAAACCTGAAA+TGG	0.282604	3.1:+92911418	MS.gene68129:CDS
CATTCCTATGCGACATCTTC+AGG	0.315485	3.1:+92911463	MS.gene68129:CDS
ATGATCAAAGGTGCTCTTCC+TGG	0.365904	3.1:+92911898	MS.gene68129:CDS
TTTCGTCTTCAATCCGTTGA+TGG	0.384156	3.1:+92911488	MS.gene68129:CDS
TCAAATACAAGGCGCTGATT+AGG	0.398930	3.1:-92911518	None:intergenic
AAGATGACCCATTTCAGGTT+TGG	0.399688	3.1:-92911426	None:intergenic
CTCTTGGAACCATGGCTCAT+TGG	0.403785	3.1:-92911730	None:intergenic
TGGTGTGATGGGTACCAAAT+TGG	0.414953	3.1:+92911247	MS.gene68129:CDS
GTTGTTCCCGTCACTGTTGT+CGG	0.415769	3.1:+92911302	MS.gene68129:CDS
GGTGATCTTGTTGATGTCTC+TGG	0.428399	3.1:+92911557	MS.gene68129:CDS
AAGCTTTCTGGTCTTCCTGT+TGG	0.434373	3.1:-92911839	None:intergenic
ACGCCGTCCAAGTTGGTTAC+CGG	0.438083	3.1:+92911381	MS.gene68129:CDS
TCCAAGTTGTCTGTGACTCT+TGG	0.442433	3.1:-92911746	None:intergenic
TCCAAGAGTCACAGACAACT+TGG	0.460086	3.1:+92911745	MS.gene68129:CDS
TTCTTGCCAACAATCTTAGC+GGG	0.460342	3.1:-92911949	None:intergenic
ACTGTTGTCGGTTTCAAAGA+AGG	0.461503	3.1:+92911314	MS.gene68129:CDS
AGAGGCTGGTGTTGGTGTGA+TGG	0.463975	3.1:+92911235	MS.gene68129:CDS
TACACCTGGTCGCGTATACA+AGG	0.469173	3.1:+92911786	MS.gene68129:CDS
TTTCAGGTTTGGTCAATTTG+CGG	0.469193	3.1:-92911415	None:intergenic
GTTGTAACCGTCGGTGGCGT+CGG	0.473671	3.1:-92911360	None:intergenic
AAAGAAGATGCCTGGTAGGA+TGG	0.474224	3.1:+92911810	MS.gene68129:CDS
GAGGCTGGTGTTGGTGTGAT+GGG	0.474712	3.1:+92911236	MS.gene68129:CDS
TAACCCTCCGGTAACCAACT+TGG	0.478957	3.1:-92911388	None:intergenic
CACAGACAACTTGGATCCAT+TGG	0.481197	3.1:+92911754	MS.gene68129:CDS
GTAGGATGGGTGGAACCAAC+AGG	0.493432	3.1:+92911824	MS.gene68129:CDS
TACGCGACCAGGTGTAGTTC+CGG	0.494636	3.1:-92911779	None:intergenic
TTTCCCTTGTATACGCGACC+AGG	0.499382	3.1:-92911790	None:intergenic
AGAAGATTACCAGGCTTACC+AGG	0.500896	3.1:-92911916	None:intergenic
TGAAATGGGTCATCTTGAAA+AGG	0.503372	3.1:+92911433	MS.gene68129:CDS
ACGGGAACAACTTCACCGTT+AGG	0.508452	3.1:-92911290	None:intergenic
AAGAAGATGCCTGGTAGGAT+GGG	0.509948	3.1:+92911811	MS.gene68129:CDS
GGTGTGATGGGTACCAAATT+GGG	0.512034	3.1:+92911248	MS.gene68129:CDS
AAATTGACCAAACCTGAAAT+GGG	0.513032	3.1:+92911419	MS.gene68129:CDS
TTGAAACCGACAACAGTGAC+GGG	0.513527	3.1:-92911308	None:intergenic
GGTGCTCTTCCTGGTAAGCC+TGG	0.514459	3.1:+92911907	MS.gene68129:CDS
AAGCGTCATAACTTCAAAAG+AGG	0.517261	3.1:+92911706	MS.gene68129:CDS
AGGTGTAGTTCCGGCACCAA+TGG	0.518535	3.1:-92911770	None:intergenic
TTGGTTCCACCCATCCTACC+AGG	0.519178	3.1:-92911820	None:intergenic
ATGGGTCATCTTGAAAAGGT+TGG	0.519826	3.1:+92911437	MS.gene68129:CDS
GATGTCTCTGGCACCACCAT+CGG	0.522268	3.1:+92911569	MS.gene68129:CDS
GGTGGTGAAAATGAGCTTAG+AGG	0.522460	3.1:+92911217	MS.gene68129:CDS
GTAAGCCTGGTAATCTTCTA+CGG	0.530779	3.1:+92911920	MS.gene68129:CDS
GAACAACTTCACCGTTAGGT+TGG	0.533148	3.1:-92911286	None:intergenic
CTCTGGCACCACCATCGGCA+AGG	0.534330	3.1:+92911574	MS.gene68129:CDS
TACAAGGGAAAGAAGATGCC+TGG	0.536322	3.1:+92911802	MS.gene68129:CDS
GTCTGTGACTCTTGGAACCA+TGG	0.543733	3.1:-92911738	None:intergenic
CTGAAGATGTCGCATAGGAA+TGG	0.560330	3.1:-92911462	None:intergenic
CAACTTGGATCCATTGGTGC+CGG	0.569215	3.1:+92911760	MS.gene68129:CDS
ATTTGCGGTCTCTAACCCTC+CGG	0.569415	3.1:-92911400	None:intergenic
ATTAGGTTCAAAACCATCAA+CGG	0.570807	3.1:-92911501	None:intergenic
TCTGGCACCACCATCGGCAA+GGG	0.572275	3.1:+92911575	MS.gene68129:CDS
CTTAATGTTATCATGATCAA+AGG	0.572918	3.1:+92911886	MS.gene68129:CDS
ATTGGTGCCGGAACTACACC+TGG	0.580799	3.1:+92911772	MS.gene68129:CDS
TTTGAAACCGACAACAGTGA+CGG	0.586413	3.1:-92911309	None:intergenic
CCGTCCAAGTTGGTTACCGG+AGG	0.591201	3.1:+92911384	MS.gene68129:CDS
GTTCTTGCCAACAATCTTAG+CGG	0.594511	3.1:-92911950	None:intergenic
AAGATGCCTGGTAGGATGGG+TGG	0.594546	3.1:+92911814	MS.gene68129:CDS
ACCTTGAAAACCCTTGCCGA+TGG	0.600155	3.1:-92911585	None:intergenic
TGAAAAGCTCATCAAATACA+AGG	0.600821	3.1:-92911529	None:intergenic
GCTATCCGTAGAAGATTACC+AGG	0.602366	3.1:-92911925	None:intergenic
AGGGAAAGAAGATGCCTGGT+AGG	0.605040	3.1:+92911806	MS.gene68129:CDS
TTGAAAACCCTTGCCGATGG+TGG	0.607518	3.1:-92911582	None:intergenic
ATCAAAACCGACGCCACCGA+CGG	0.609949	3.1:+92911353	MS.gene68129:CDS
GGTTACAACGCCGTCCAAGT+TGG	0.618166	3.1:+92911374	MS.gene68129:CDS
GTGAAAATGAGCTTAGAGGC+TGG	0.634928	3.1:+92911221	MS.gene68129:CDS
TCTTGCCAACAATCTTAGCG+GGG	0.638407	3.1:-92911948	None:intergenic
CCTCCGGTAACCAACTTGGA+CGG	0.639997	3.1:-92911384	None:intergenic
ATGAGCTTAGAGGCTGGTGT+TGG	0.640133	3.1:+92911227	MS.gene68129:CDS
AAAAGAGGACCAATGAGCCA+TGG	0.640937	3.1:+92911721	MS.gene68129:CDS
CGTCCAAGTTGGTTACCGGA+GGG	0.643249	3.1:+92911385	MS.gene68129:CDS
CTTGCCAACAATCTTAGCGG+GGG	0.643846	3.1:-92911947	None:intergenic
GACGGCGTTGTAACCGTCGG+TGG	0.648118	3.1:-92911366	None:intergenic
AACTCCTGAAGATGTCGCAT+AGG	0.655881	3.1:-92911467	None:intergenic
TTGGACGGCGTTGTAACCGT+CGG	0.663802	3.1:-92911369	None:intergenic
ACACCTGGTCGCGTATACAA+GGG	0.687415	3.1:+92911787	MS.gene68129:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAATAATATCTTTCACTAA+TGG	+	chr3.1:92911653-92911672	MS.gene68129:intron	15.0%
!	CTTAATGTTATCATGATCAA+AGG	+	chr3.1:92911886-92911905	MS.gene68129:CDS	25.0%
!	TTTAACAATCTTAAGCTTTC+TGG	-	chr3.1:92911854-92911873	None:intergenic	25.0%
	AAATTGACCAAACCTGAAAT+GGG	+	chr3.1:92911419-92911438	MS.gene68129:CDS	30.0%
	ATGAACTTACTTACTTTGAC+AGG	+	chr3.1:92911676-92911695	MS.gene68129:intron	30.0%
	ATTAGGTTCAAAACCATCAA+CGG	-	chr3.1:92911504-92911523	None:intergenic	30.0%
	TATCAACTCAACAACTAGAA+GGG	-	chr3.1:92911636-92911655	None:intergenic	30.0%
	TGAAAAGCTCATCAAATACA+AGG	-	chr3.1:92911532-92911551	None:intergenic	30.0%
	TTATCAACTCAACAACTAGA+AGG	-	chr3.1:92911637-92911656	None:intergenic	30.0%
!	TTTGATGAGCTTTTCAATGA+AGG	+	chr3.1:92911536-92911555	MS.gene68129:CDS	30.0%
	AAAGCTCATCATTCCCAATT+TGG	-	chr3.1:92911264-92911283	None:intergenic	35.0%
	AACTTACTTACTTTGACAGG+TGG	+	chr3.1:92911679-92911698	MS.gene68129:intron	35.0%
	AAGCGTCATAACTTCAAAAG+AGG	+	chr3.1:92911706-92911725	MS.gene68129:CDS	35.0%
	CAAATTGACCAAACCTGAAA+TGG	+	chr3.1:92911418-92911437	MS.gene68129:CDS	35.0%
	TGAAATGGGTCATCTTGAAA+AGG	+	chr3.1:92911433-92911452	MS.gene68129:CDS	35.0%
!!	ATGAGCTTTTTCCAACCTAA+CGG	+	chr3.1:92911275-92911294	MS.gene68129:CDS	35.0%
!!	TTTCAGGTTTGGTCAATTTG+CGG	-	chr3.1:92911418-92911437	None:intergenic	35.0%
!!	TTTTCAAGATGACCCATTTC+AGG	-	chr3.1:92911434-92911453	None:intergenic	35.0%
	AACTAGAAGGGAATGCAAAG+AGG	-	chr3.1:92911624-92911643	None:intergenic	40.0%
	ACTAGAAGGGAATGCAAAGA+GGG	-	chr3.1:92911623-92911642	None:intergenic	40.0%
	ATGGGTCATCTTGAAAAGGT+TGG	+	chr3.1:92911437-92911456	MS.gene68129:CDS	40.0%
	GTAAGCCTGGTAATCTTCTA+CGG	+	chr3.1:92911920-92911939	MS.gene68129:CDS	40.0%
	GTTCTTGCCAACAATCTTAG+CGG	-	chr3.1:92911953-92911972	None:intergenic	40.0%
	TTCTTGCCAACAATCTTAGC+GGG	-	chr3.1:92911952-92911971	None:intergenic	40.0%
	TTTCGTCTTCAATCCGTTGA+TGG	+	chr3.1:92911488-92911507	MS.gene68129:CDS	40.0%
!	TTTGAAACCGACAACAGTGA+CGG	-	chr3.1:92911312-92911331	None:intergenic	40.0%
!!	AAGATGACCCATTTCAGGTT+TGG	-	chr3.1:92911429-92911448	None:intergenic	40.0%
!!	ACTGTTGTCGGTTTCAAAGA+AGG	+	chr3.1:92911314-92911333	MS.gene68129:CDS	40.0%
!!	TCAAATACAAGGCGCTGATT+AGG	-	chr3.1:92911521-92911540	None:intergenic	40.0%
	AAAAGAGGACCAATGAGCCA+TGG	+	chr3.1:92911721-92911740	MS.gene68129:CDS	45.0%
	AAAGAAGATGCCTGGTAGGA+TGG	+	chr3.1:92911810-92911829	MS.gene68129:CDS	45.0%
	AACTCCTGAAGATGTCGCAT+AGG	-	chr3.1:92911470-92911489	None:intergenic	45.0%
	AAGAAGATGCCTGGTAGGAT+GGG	+	chr3.1:92911811-92911830	MS.gene68129:CDS	45.0%
	AGAAGATTACCAGGCTTACC+AGG	-	chr3.1:92911919-92911938	None:intergenic	45.0%
	CACAGACAACTTGGATCCAT+TGG	+	chr3.1:92911754-92911773	MS.gene68129:CDS	45.0%
	CATTCCTATGCGACATCTTC+AGG	+	chr3.1:92911463-92911482	MS.gene68129:CDS	45.0%
	CTGAAGATGTCGCATAGGAA+TGG	-	chr3.1:92911465-92911484	None:intergenic	45.0%
	GAACAACTTCACCGTTAGGT+TGG	-	chr3.1:92911289-92911308	None:intergenic	45.0%
	GCTATCCGTAGAAGATTACC+AGG	-	chr3.1:92911928-92911947	None:intergenic	45.0%
	GGTGATCTTGTTGATGTCTC+TGG	+	chr3.1:92911557-92911576	MS.gene68129:CDS	45.0%
	GGTGGTGAAAATGAGCTTAG+AGG	+	chr3.1:92911217-92911236	MS.gene68129:CDS	45.0%
	GTGAAAATGAGCTTAGAGGC+TGG	+	chr3.1:92911221-92911240	MS.gene68129:CDS	45.0%
	TACAAGGGAAAGAAGATGCC+TGG	+	chr3.1:92911802-92911821	MS.gene68129:CDS	45.0%
	TCCAAGAGTCACAGACAACT+TGG	+	chr3.1:92911745-92911764	MS.gene68129:CDS	45.0%
	TCCAAGTTGTCTGTGACTCT+TGG	-	chr3.1:92911749-92911768	None:intergenic	45.0%
	TCTTGCCAACAATCTTAGCG+GGG	-	chr3.1:92911951-92911970	None:intergenic	45.0%
	TTGAAACCGACAACAGTGAC+GGG	-	chr3.1:92911311-92911330	None:intergenic	45.0%
!	AAGCTTTCTGGTCTTCCTGT+TGG	-	chr3.1:92911842-92911861	None:intergenic	45.0%
!!	ATGATCAAAGGTGCTCTTCC+TGG	+	chr3.1:92911898-92911917	MS.gene68129:CDS	45.0%
!!	GGTGTGATGGGTACCAAATT+GGG	+	chr3.1:92911248-92911267	MS.gene68129:CDS	45.0%
!!	TGGTGTGATGGGTACCAAAT+TGG	+	chr3.1:92911247-92911266	MS.gene68129:CDS	45.0%
	ACACCTGGTCGCGTATACAA+GGG	+	chr3.1:92911787-92911806	MS.gene68129:CDS	50.0%
	ACCTTGAAAACCCTTGCCGA+TGG	-	chr3.1:92911588-92911607	None:intergenic	50.0%
	ACGGGAACAACTTCACCGTT+AGG	-	chr3.1:92911293-92911312	None:intergenic	50.0%
	AGGGAAAGAAGATGCCTGGT+AGG	+	chr3.1:92911806-92911825	MS.gene68129:CDS	50.0%
	ATAGCCCCCGCTAAGATTGT+TGG	+	chr3.1:92911943-92911962	MS.gene68129:CDS	50.0%
	ATGAGCTTAGAGGCTGGTGT+TGG	+	chr3.1:92911227-92911246	MS.gene68129:CDS	50.0%
	ATTTGCGGTCTCTAACCCTC+CGG	-	chr3.1:92911403-92911422	None:intergenic	50.0%
	CAACTTGGATCCATTGGTGC+CGG	+	chr3.1:92911760-92911779	MS.gene68129:CDS	50.0%
	CTCTTGGAACCATGGCTCAT+TGG	-	chr3.1:92911733-92911752	None:intergenic	50.0%
	CTTGCCAACAATCTTAGCGG+GGG	-	chr3.1:92911950-92911969	None:intergenic	50.0%
	GTCTGTGACTCTTGGAACCA+TGG	-	chr3.1:92911741-92911760	None:intergenic	50.0%
	GTTGTTCCCGTCACTGTTGT+CGG	+	chr3.1:92911302-92911321	MS.gene68129:CDS	50.0%
	TAACCCTCCGGTAACCAACT+TGG	-	chr3.1:92911391-92911410	None:intergenic	50.0%
	TACACCTGGTCGCGTATACA+AGG	+	chr3.1:92911786-92911805	MS.gene68129:CDS	50.0%
	TTGAAAACCCTTGCCGATGG+TGG	-	chr3.1:92911585-92911604	None:intergenic	50.0%
	TTTCCCTTGTATACGCGACC+AGG	-	chr3.1:92911793-92911812	None:intergenic	50.0%
!	ACCATCGGCAAGGGTTTTCA+AGG	+	chr3.1:92911584-92911603	MS.gene68129:CDS	50.0%
	AAGATGCCTGGTAGGATGGG+TGG	+	chr3.1:92911814-92911833	MS.gene68129:CDS	55.0%
	AGGTGTAGTTCCGGCACCAA+TGG	-	chr3.1:92911773-92911792	None:intergenic	55.0%
	ATCAAAACCGACGCCACCGA+CGG	+	chr3.1:92911353-92911372	MS.gene68129:CDS	55.0%
	CCTCCGGTAACCAACTTGGA+CGG	-	chr3.1:92911387-92911406	None:intergenic	55.0%
	GATGTCTCTGGCACCACCAT+CGG	+	chr3.1:92911569-92911588	MS.gene68129:CDS	55.0%
	GGTTACAACGCCGTCCAAGT+TGG	+	chr3.1:92911374-92911393	MS.gene68129:CDS	55.0%
	GTAGGATGGGTGGAACCAAC+AGG	+	chr3.1:92911824-92911843	MS.gene68129:CDS	55.0%
	TACGCGACCAGGTGTAGTTC+CGG	-	chr3.1:92911782-92911801	None:intergenic	55.0%
	TTGGACGGCGTTGTAACCGT+CGG	-	chr3.1:92911372-92911391	None:intergenic	55.0%
	TTGGTTCCACCCATCCTACC+AGG	-	chr3.1:92911823-92911842	None:intergenic	55.0%
!!	ACGCCGTCCAAGTTGGTTAC+CGG	+	chr3.1:92911381-92911400	MS.gene68129:CDS	55.0%
!!	AGAGGCTGGTGTTGGTGTGA+TGG	+	chr3.1:92911235-92911254	MS.gene68129:CDS	55.0%
!!	ATTGGTGCCGGAACTACACC+TGG	+	chr3.1:92911772-92911791	MS.gene68129:CDS	55.0%
!!	CGTCCAAGTTGGTTACCGGA+GGG	+	chr3.1:92911385-92911404	MS.gene68129:CDS	55.0%
!!	GAGGCTGGTGTTGGTGTGAT+GGG	+	chr3.1:92911236-92911255	MS.gene68129:CDS	55.0%
	GGTGCTCTTCCTGGTAAGCC+TGG	+	chr3.1:92911907-92911926	MS.gene68129:CDS	60.0%
	GTTGTAACCGTCGGTGGCGT+CGG	-	chr3.1:92911363-92911382	None:intergenic	60.0%
	TCTGGCACCACCATCGGCAA+GGG	+	chr3.1:92911575-92911594	MS.gene68129:CDS	60.0%
!!	CCGTCCAAGTTGGTTACCGG+AGG	+	chr3.1:92911384-92911403	MS.gene68129:CDS	60.0%
	CTCTGGCACCACCATCGGCA+AGG	+	chr3.1:92911574-92911593	MS.gene68129:CDS	65.0%
	GACGGCGTTGTAACCGTCGG+TGG	-	chr3.1:92911369-92911388	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	92911215	92911987	92911215	ID=MS.gene68129
chr3.1	mRNA	92911215	92911987	92911215	ID=MS.gene68129.t1;Parent=MS.gene68129
chr3.1	exon	92911215	92911605	92911215	ID=MS.gene68129.t1.exon1;Parent=MS.gene68129.t1
chr3.1	CDS	92911215	92911605	92911215	ID=cds.MS.gene68129.t1;Parent=MS.gene68129.t1
chr3.1	exon	92911698	92911987	92911698	ID=MS.gene68129.t1.exon2;Parent=MS.gene68129.t1
chr3.1	CDS	92911698	92911987	92911698	ID=cds.MS.gene68129.t1;Parent=MS.gene68129.t1

Gene Sequence

>MS.gene68129

ATGGTGGTGAAAATGAGCTTAGAGGCTGGTGTTGGTGTGATGGGTACCAAATTGGGAATGATGAGCTTTTTCCAACCTAACGGTGAAGTTGTTCCCGTCACTGTTGTCGGTTTCAAAGAAGGCAACATCGTCACTCAAATCAAAACCGACGCCACCGACGGTTACAACGCCGTCCAAGTTGGTTACCGGAGGGTTAGAGACCGCAAATTGACCAAACCTGAAATGGGTCATCTTGAAAAGGTTGGAGCCATTCCTATGCGACATCTTCAGGAGTTTCGTCTTCAATCCGTTGATGGTTTTGAACCTAATCAGCGCCTTGTATTTGATGAGCTTTTCAATGAAGGTGATCTTGTTGATGTCTCTGGCACCACCATCGGCAAGGGTTTTCAAGGTCTGTAACTCTCTCCCTCTTTGCATTCCCTTCTAGTTGTTGAGTTGATAATAATATCTTTCACTAATGGATGAACTTACTTACTTTGACAGGTGGTATCAAGCGTCATAACTTCAAAAGAGGACCAATGAGCCATGGTTCCAAGAGTCACAGACAACTTGGATCCATTGGTGCCGGAACTACACCTGGTCGCGTATACAAGGGAAAGAAGATGCCTGGTAGGATGGGTGGAACCAACAGGAAGACCAGAAAGCTTAAGATTGTTAAAATTGATAAAGATCTTAATGTTATCATGATCAAAGGTGCTCTTCCTGGTAAGCCTGGTAATCTTCTACGGATAGCCCCCGCTAAGATTGTTGGCAAGAACATTCCAAAGAATTAA

Protein sequence

>MS.gene68129.t1

MVVKMSLEAGVGVMGTKLGMMSFFQPNGEVVPVTVVGFKEGNIVTQIKTDATDGYNAVQVGYRRVRDRKLTKPEMGHLEKVGAIPMRHLQEFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTNRKTRKLKIVKIDKDLNVIMIKGALPGKPGNLLRIAPAKIVGKNIPKN