Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92219.t1 | XP_013447450.1 | 91.8 | 182 | 6 | 2 | 1 | 174 | 1 | 181 | 5.30E-86 | 327 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92219.t1 | P07689 | 80.6 | 180 | 26 | 2 | 3 | 174 | 2 | 180 | 1.1e-76 | 287.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92219.t1 | B7FMC2 | 91.8 | 182 | 6 | 2 | 1 | 174 | 1 | 181 | 3.8e-86 | 327.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene92219 | 0.825445 | 4.67E-54 | -1.69E-46 |
| MS.gene049171 | MS.gene92219 | 0.904782 | 8.57E-80 | -1.69E-46 |
| MS.gene049173 | MS.gene92219 | 0.889338 | 2.65E-73 | -1.69E-46 |
| MS.gene049217 | MS.gene92219 | 0.860612 | 1.83E-63 | -1.69E-46 |
| MS.gene049222 | MS.gene92219 | 0.869583 | 2.78E-66 | -1.69E-46 |
| MS.gene049232 | MS.gene92219 | 0.838275 | 3.17E-57 | -1.69E-46 |
| MS.gene049285 | MS.gene92219 | 0.89751 | 1.31E-76 | -1.69E-46 |
| MS.gene049320 | MS.gene92219 | 0.885587 | 7.15E-72 | -1.69E-46 |
| MS.gene049369 | MS.gene92219 | 0.803121 | 4.05E-49 | -1.69E-46 |
| MS.gene049396 | MS.gene92219 | 0.817532 | 3.14E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene92219 | 0.876056 | 1.89E-68 | -1.69E-46 |
| MS.gene049633 | MS.gene92219 | 0.871438 | 6.84E-67 | -1.69E-46 |
| MS.gene049805 | MS.gene92219 | 0.858154 | 1.00E-62 | -1.69E-46 |
| MS.gene05010 | MS.gene92219 | 0.846878 | 1.65E-59 | -1.69E-46 |
| MS.gene050163 | MS.gene92219 | 0.847981 | 8.20E-60 | -1.69E-46 |
| MS.gene050165 | MS.gene92219 | 0.83899 | 2.07E-57 | -1.69E-46 |
| MS.gene050170 | MS.gene92219 | 0.813344 | 2.68E-51 | -1.69E-46 |
| MS.gene050216 | MS.gene92219 | 0.810574 | 1.08E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene92219 | 0.856201 | 3.78E-62 | -1.69E-46 |
| MS.gene050333 | MS.gene92219 | 0.856832 | 2.46E-62 | -1.69E-46 |
| MS.gene050444 | MS.gene92219 | 0.830567 | 2.73E-55 | -1.69E-46 |
| MS.gene050496 | MS.gene92219 | 0.805558 | 1.26E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene92219 | 0.862232 | 5.86E-64 | -1.69E-46 |
| MS.gene050518 | MS.gene92219 | 0.852071 | 5.87E-61 | -1.69E-46 |
| MS.gene050577 | MS.gene92219 | 0.829292 | 5.59E-55 | -1.69E-46 |
| MS.gene050593 | MS.gene92219 | 0.826638 | 2.43E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene92219 | 0.859402 | 4.24E-63 | -1.69E-46 |
| MS.gene050662 | MS.gene92219 | 0.838401 | 2.94E-57 | -1.69E-46 |
| MS.gene050675 | MS.gene92219 | 0.842072 | 3.23E-58 | -1.69E-46 |
| MS.gene050686 | MS.gene92219 | 0.830499 | 2.84E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene92219 | 0.864471 | 1.19E-64 | -1.69E-46 |
| MS.gene050747 | MS.gene92219 | 0.848041 | 7.89E-60 | -1.69E-46 |
| MS.gene050772 | MS.gene92219 | 0.906817 | 9.89E-81 | -1.69E-46 |
| MS.gene05080 | MS.gene92219 | 0.868369 | 6.87E-66 | -1.69E-46 |
| MS.gene05081 | MS.gene92219 | 0.81545 | 9.19E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene92219 | 0.843881 | 1.07E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene92219 | 0.840577 | 7.99E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene92219 | 0.835785 | 1.37E-56 | -1.69E-46 |
| MS.gene050986 | MS.gene92219 | 0.842748 | 2.14E-58 | -1.69E-46 |
| MS.gene05100 | MS.gene92219 | 0.845239 | 4.60E-59 | -1.69E-46 |
| MS.gene05105 | MS.gene92219 | 0.820213 | 7.73E-53 | -1.69E-46 |
| MS.gene051228 | MS.gene92219 | 0.848478 | 5.97E-60 | -1.69E-46 |
| MS.gene051317 | MS.gene92219 | 0.801272 | 9.74E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene92219 | 0.867028 | 1.85E-65 | -1.69E-46 |
| MS.gene051666 | MS.gene92219 | 0.865233 | 6.85E-65 | -1.69E-46 |
| MS.gene051692 | MS.gene92219 | 0.82911 | 6.18E-55 | -1.69E-46 |
| MS.gene051694 | MS.gene92219 | 0.80092 | 1.15E-48 | -1.69E-46 |
| MS.gene051810 | MS.gene92219 | 0.847342 | 1.23E-59 | -1.69E-46 |
| MS.gene051838 | MS.gene92219 | 0.832122 | 1.13E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene92219 | 0.870049 | 1.96E-66 | -1.69E-46 |
| MS.gene051874 | MS.gene92219 | 0.823158 | 1.61E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene92219 | 0.834316 | 3.22E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene92219 | 0.848693 | 5.21E-60 | -1.69E-46 |
| MS.gene052271 | MS.gene92219 | 0.861863 | 7.61E-64 | -1.69E-46 |
| MS.gene052379 | MS.gene92219 | 0.820554 | 6.45E-53 | -1.69E-46 |
| MS.gene052421 | MS.gene92219 | 0.82118 | 4.63E-53 | -1.69E-46 |
| MS.gene052481 | MS.gene92219 | 0.806477 | 8.07E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene92219 | 0.81462 | 1.40E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene92219 | 0.824825 | 6.54E-54 | -1.69E-46 |
| MS.gene052486 | MS.gene92219 | 0.820577 | 6.37E-53 | -1.69E-46 |
| MS.gene052501 | MS.gene92219 | 0.819022 | 1.44E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene92219 | 0.859322 | 4.48E-63 | -1.69E-46 |
| MS.gene052504 | MS.gene92219 | 0.804166 | 2.46E-49 | -1.69E-46 |
| MS.gene052506 | MS.gene92219 | 0.853504 | 2.29E-61 | -1.69E-46 |
| MS.gene052615 | MS.gene92219 | 0.847238 | 1.31E-59 | -1.69E-46 |
| MS.gene052820 | MS.gene92219 | 0.812972 | 3.24E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene92219 | 0.866924 | 2.00E-65 | -1.69E-46 |
| MS.gene052823 | MS.gene92219 | 0.850019 | 2.23E-60 | -1.69E-46 |
| MS.gene052825 | MS.gene92219 | 0.848197 | 7.15E-60 | -1.69E-46 |
| MS.gene052870 | MS.gene92219 | 0.834972 | 2.20E-56 | -1.69E-46 |
| MS.gene052872 | MS.gene92219 | 0.839007 | 2.05E-57 | -1.69E-46 |
| MS.gene052916 | MS.gene92219 | 0.83222 | 1.07E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene92219 | 0.838772 | 2.36E-57 | -1.69E-46 |
| MS.gene053009 | MS.gene92219 | 0.85136 | 9.34E-61 | -1.69E-46 |
| MS.gene053103 | MS.gene92219 | 0.829674 | 4.51E-55 | -1.69E-46 |
| MS.gene053104 | MS.gene92219 | 0.839521 | 1.51E-57 | -1.69E-46 |
| MS.gene053203 | MS.gene92219 | 0.832927 | 7.15E-56 | -1.69E-46 |
| MS.gene053207 | MS.gene92219 | 0.84958 | 2.95E-60 | -1.69E-46 |
| MS.gene053213 | MS.gene92219 | 0.874119 | 8.66E-68 | -1.69E-46 |
| MS.gene053286 | MS.gene92219 | 0.867818 | 1.03E-65 | -1.69E-46 |
| MS.gene053322 | MS.gene92219 | 0.81904 | 1.43E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene92219 | 0.813891 | 2.03E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene92219 | 0.834409 | 3.05E-56 | -1.69E-46 |
| MS.gene053479 | MS.gene92219 | 0.805827 | 1.11E-49 | -1.69E-46 |
| MS.gene053480 | MS.gene92219 | 0.820398 | 7.00E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene92219 | 0.862062 | 6.61E-64 | -1.69E-46 |
| MS.gene053626 | MS.gene92219 | 0.8205 | 6.64E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene92219 | 0.885729 | 6.33E-72 | -1.69E-46 |
| MS.gene053824 | MS.gene92219 | 0.881902 | 1.63E-70 | -1.69E-46 |
| MS.gene053912 | MS.gene92219 | 0.816789 | 4.61E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene92219 | 0.885727 | 6.33E-72 | -1.69E-46 |
| MS.gene054003 | MS.gene92219 | 0.81658 | 5.14E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene92219 | 0.825901 | 3.64E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene92219 | 0.840902 | 6.57E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene92219 | 0.867978 | 9.19E-66 | -1.69E-46 |
| MS.gene054642 | MS.gene92219 | 0.886407 | 3.51E-72 | -1.69E-46 |
| MS.gene05470 | MS.gene92219 | 0.823991 | 1.03E-53 | -1.69E-46 |
| MS.gene054927 | MS.gene92219 | 0.829221 | 5.81E-55 | -1.69E-46 |
| MS.gene05494 | MS.gene92219 | 0.81072 | 1.00E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene92219 | 0.876462 | 1.37E-68 | -1.69E-46 |
| MS.gene05505 | MS.gene92219 | 0.849285 | 3.57E-60 | -1.69E-46 |
| MS.gene055206 | MS.gene92219 | 0.86454 | 1.13E-64 | -1.69E-46 |
| MS.gene055212 | MS.gene92219 | 0.838411 | 2.92E-57 | -1.69E-46 |
| MS.gene055224 | MS.gene92219 | 0.831392 | 1.71E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene92219 | 0.820124 | 8.10E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene92219 | 0.893672 | 5.05E-75 | -1.69E-46 |
| MS.gene055502 | MS.gene92219 | 0.878517 | 2.63E-69 | -1.69E-46 |
| MS.gene055577 | MS.gene92219 | 0.851255 | 1.00E-60 | -1.69E-46 |
| MS.gene055636 | MS.gene92219 | 0.810112 | 1.36E-50 | -1.69E-46 |
| MS.gene055638 | MS.gene92219 | 0.816037 | 6.80E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene92219 | 0.81769 | 2.89E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene92219 | 0.902493 | 9.17E-79 | -1.69E-46 |
| MS.gene055748 | MS.gene92219 | 0.828826 | 7.25E-55 | -1.69E-46 |
| MS.gene055750 | MS.gene92219 | 0.831308 | 1.80E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene92219 | 0.829176 | 5.96E-55 | -1.69E-46 |
| MS.gene055776 | MS.gene92219 | 0.824354 | 8.44E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene92219 | 0.840267 | 9.64E-58 | -1.69E-46 |
| MS.gene05592 | MS.gene92219 | 0.842236 | 2.93E-58 | -1.69E-46 |
| MS.gene055941 | MS.gene92219 | 0.843901 | 1.05E-58 | -1.69E-46 |
| MS.gene055956 | MS.gene92219 | -0.813177 | 2.92E-51 | -1.69E-46 |
| MS.gene056046 | MS.gene92219 | 0.80216 | 6.40E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene92219 | 0.833791 | 4.35E-56 | -1.69E-46 |
| MS.gene056166 | MS.gene92219 | 0.808089 | 3.68E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene92219 | 0.862394 | 5.23E-64 | -1.69E-46 |
| MS.gene056487 | MS.gene92219 | 0.819056 | 1.42E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene92219 | 0.865031 | 7.93E-65 | -1.69E-46 |
| MS.gene056510 | MS.gene92219 | 0.869689 | 2.57E-66 | -1.69E-46 |
| MS.gene056511 | MS.gene92219 | 0.820482 | 6.70E-53 | -1.69E-46 |
| MS.gene056549 | MS.gene92219 | 0.819193 | 1.32E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene92219 | 0.889291 | 2.76E-73 | -1.69E-46 |
| MS.gene056692 | MS.gene92219 | 0.809796 | 1.59E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene92219 | 0.812658 | 3.80E-51 | -1.69E-46 |
| MS.gene056946 | MS.gene92219 | 0.819274 | 1.27E-52 | -1.69E-46 |
| MS.gene057048 | MS.gene92219 | 0.80464 | 1.96E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene92219 | 0.857254 | 1.85E-62 | -1.69E-46 |
| MS.gene057086 | MS.gene92219 | 0.813244 | 2.82E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene92219 | 0.857015 | 2.18E-62 | -1.69E-46 |
| MS.gene057331 | MS.gene92219 | 0.843873 | 1.07E-58 | -1.69E-46 |
| MS.gene057416 | MS.gene92219 | 0.879465 | 1.22E-69 | -1.69E-46 |
| MS.gene057658 | MS.gene92219 | 0.821971 | 3.04E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene92219 | 0.848776 | 4.94E-60 | -1.69E-46 |
| MS.gene057805 | MS.gene92219 | 0.827815 | 1.27E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene92219 | 0.80796 | 3.92E-50 | -1.69E-46 |
| MS.gene057856 | MS.gene92219 | 0.825724 | 4.01E-54 | -1.69E-46 |
| MS.gene057857 | MS.gene92219 | 0.816978 | 4.18E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene92219 | 0.830632 | 2.63E-55 | -1.69E-46 |
| MS.gene058019 | MS.gene92219 | 0.835503 | 1.62E-56 | -1.69E-46 |
| MS.gene058130 | MS.gene92219 | 0.803901 | 2.79E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene92219 | 0.847479 | 1.13E-59 | -1.69E-46 |
| MS.gene05837 | MS.gene92219 | 0.813424 | 2.58E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene92219 | 0.911404 | 6.32E-83 | -1.69E-46 |
| MS.gene058459 | MS.gene92219 | 0.800219 | 1.60E-48 | -1.69E-46 |
| MS.gene058544 | MS.gene92219 | 0.854615 | 1.09E-61 | -1.69E-46 |
| MS.gene058723 | MS.gene92219 | 0.880183 | 6.77E-70 | -1.69E-46 |
| MS.gene058773 | MS.gene92219 | 0.867529 | 1.28E-65 | -1.69E-46 |
| MS.gene058838 | MS.gene92219 | 0.867241 | 1.58E-65 | -1.69E-46 |
| MS.gene059022 | MS.gene92219 | 0.882039 | 1.46E-70 | -1.69E-46 |
| MS.gene059023 | MS.gene92219 | 0.865266 | 6.69E-65 | -1.69E-46 |
| MS.gene059029 | MS.gene92219 | 0.83617 | 1.10E-56 | -1.69E-46 |
| MS.gene05913 | MS.gene92219 | 0.876736 | 1.10E-68 | -1.69E-46 |
| MS.gene05934 | MS.gene92219 | 0.837717 | 4.41E-57 | -1.69E-46 |
| MS.gene059367 | MS.gene92219 | 0.812626 | 3.86E-51 | -1.69E-46 |
| MS.gene059455 | MS.gene92219 | 0.811531 | 6.68E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene92219 | 0.826487 | 2.64E-54 | -1.69E-46 |
| MS.gene059667 | MS.gene92219 | 0.831455 | 1.65E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene92219 | 0.888824 | 4.19E-73 | -1.69E-46 |
| MS.gene059711 | MS.gene92219 | 0.809212 | 2.12E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene92219 | 0.88295 | 6.77E-71 | -1.69E-46 |
| MS.gene059756 | MS.gene92219 | 0.84653 | 2.05E-59 | -1.69E-46 |
| MS.gene059801 | MS.gene92219 | 0.828987 | 6.62E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene92219 | 0.857545 | 1.52E-62 | -1.69E-46 |
| MS.gene059902 | MS.gene92219 | 0.864102 | 1.55E-64 | -1.69E-46 |
| MS.gene059960 | MS.gene92219 | 0.809749 | 1.62E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene92219 | 0.800441 | 1.44E-48 | -1.69E-46 |
| MS.gene060341 | MS.gene92219 | 0.848824 | 4.79E-60 | -1.69E-46 |
| MS.gene060482 | MS.gene92219 | 0.839211 | 1.82E-57 | -1.69E-46 |
| MS.gene060703 | MS.gene92219 | 0.84184 | 3.72E-58 | -1.69E-46 |
| MS.gene060727 | MS.gene92219 | 0.838476 | 2.81E-57 | -1.69E-46 |
| MS.gene060728 | MS.gene92219 | 0.818045 | 2.41E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene92219 | 0.863177 | 3.00E-64 | -1.69E-46 |
| MS.gene060778 | MS.gene92219 | 0.806507 | 7.95E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene92219 | 0.840698 | 7.43E-58 | -1.69E-46 |
| MS.gene060804 | MS.gene92219 | 0.818596 | 1.80E-52 | -1.69E-46 |
| MS.gene060818 | MS.gene92219 | 0.831806 | 1.35E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene92219 | 0.831526 | 1.59E-55 | -1.69E-46 |
| MS.gene060837 | MS.gene92219 | 0.834105 | 3.63E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene92219 | 0.845056 | 5.15E-59 | -1.69E-46 |
| MS.gene06097 | MS.gene92219 | 0.857502 | 1.56E-62 | -1.69E-46 |
| MS.gene060982 | MS.gene92219 | 0.84549 | 3.93E-59 | -1.69E-46 |
| MS.gene061041 | MS.gene92219 | 0.8281 | 1.08E-54 | -1.69E-46 |
| MS.gene061134 | MS.gene92219 | 0.810226 | 1.28E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene92219 | 0.86372 | 2.04E-64 | -1.69E-46 |
| MS.gene061200 | MS.gene92219 | 0.840391 | 8.94E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92219.t1 | MTR_7g007120 | 91.765 | 170 | 6 | 1 | 13 | 174 | 12 | 181 | 1.11e-115 | 325 |
| MS.gene92219.t1 | MTR_7g007120 | 91.765 | 170 | 6 | 1 | 13 | 174 | 12 | 181 | 1.42e-115 | 325 |
| MS.gene92219.t1 | MTR_7g007220 | 91.765 | 170 | 6 | 1 | 13 | 174 | 12 | 181 | 2.40e-115 | 325 |
| MS.gene92219.t1 | MTR_7g007200 | 91.176 | 170 | 7 | 1 | 13 | 174 | 12 | 181 | 2.65e-115 | 325 |
| MS.gene92219.t1 | MTR_7g007120 | 91.176 | 170 | 7 | 1 | 13 | 174 | 12 | 181 | 9.14e-115 | 323 |
| MS.gene92219.t1 | MTR_7g007230 | 90.000 | 170 | 9 | 1 | 13 | 174 | 12 | 181 | 6.04e-113 | 318 |
| MS.gene92219.t1 | MTR_6g018310 | 81.818 | 176 | 23 | 2 | 8 | 174 | 5 | 180 | 1.66e-104 | 297 |
| MS.gene92219.t1 | MTR_6g018300 | 81.250 | 176 | 21 | 3 | 8 | 174 | 5 | 177 | 5.65e-102 | 291 |
| MS.gene92219.t1 | MTR_7g007210 | 91.503 | 153 | 5 | 1 | 13 | 157 | 12 | 164 | 1.45e-101 | 290 |
| MS.gene92219.t1 | MTR_4g127870 | 45.238 | 168 | 79 | 5 | 18 | 173 | 3 | 169 | 8.72e-51 | 161 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92219.t1 | AT1G67090 | 66.667 | 183 | 47 | 3 | 1 | 174 | 1 | 178 | 1.03e-84 | 247 |
| MS.gene92219.t1 | AT5G38430 | 65.027 | 183 | 50 | 3 | 1 | 174 | 1 | 178 | 1.43e-82 | 242 |
| MS.gene92219.t1 | AT5G38430 | 65.027 | 183 | 50 | 3 | 1 | 174 | 1 | 178 | 1.43e-82 | 242 |
| MS.gene92219.t1 | AT5G38410 | 64.481 | 183 | 51 | 3 | 1 | 174 | 1 | 178 | 3.32e-82 | 241 |
| MS.gene92219.t1 | AT5G38420 | 64.481 | 183 | 51 | 3 | 1 | 174 | 1 | 178 | 8.24e-82 | 240 |
| MS.gene92219.t1 | AT5G38410 | 62.766 | 188 | 51 | 4 | 1 | 174 | 1 | 183 | 5.19e-80 | 235 |
| MS.gene92219.t1 | AT5G38410 | 61.749 | 183 | 49 | 4 | 1 | 174 | 1 | 171 | 2.28e-75 | 223 |
| MS.gene92219.t1 | AT1G67090 | 58.621 | 116 | 34 | 3 | 1 | 107 | 1 | 111 | 1.41e-36 | 124 |
Find 52 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCCATCCCTTCCTTATA+AGG | 0.282748 | 7.1:+87115427 | None:intergenic |
| AAGAAGTTGAATACCTTATA+AGG | 0.317300 | 7.1:-87115440 | MS.gene92219:CDS |
| TCTTTGTTGACCTTTGTAAC+TGG | 0.323260 | 7.1:+87116040 | None:intergenic |
| GAAGGGATGGGTTGCTTGCT+TGG | 0.368783 | 7.1:-87115418 | MS.gene92219:CDS |
| TTCTTTCGCCAATTGTTCTC+TGG | 0.378466 | 7.1:+87115458 | None:intergenic |
| GATATTATGACGGACGATAC+TGG | 0.383913 | 7.1:-87115076 | MS.gene92219:CDS |
| TCTTCCACCATTGCTTGTAA+TGG | 0.401668 | 7.1:+87116009 | None:intergenic |
| GCCAATTGTTCTCTGGTCAA+TGG | 0.405140 | 7.1:+87115465 | None:intergenic |
| ACCATTGACCAGAGAACAAT+TGG | 0.409622 | 7.1:-87115466 | MS.gene92219:CDS |
| TGATGCTTCTCAAGTGTTGA+AGG | 0.410018 | 7.1:-87115021 | MS.gene92219:CDS |
| ATGTGGAAGTTGCCTTTGTT+TGG | 0.411503 | 7.1:-87115050 | MS.gene92219:CDS |
| TACAGTTAACCGTGCCTCTT+CGG | 0.432912 | 7.1:-87116116 | MS.gene92219:CDS |
| ATGATACGGACAAAGGCATC+AGG | 0.443523 | 7.1:+87114972 | None:intergenic |
| TATGATTTCCTCTTCAGCTA+TGG | 0.470818 | 7.1:-87116143 | MS.gene92219:CDS |
| GTTGGACTCAAGTCCATGGC+TGG | 0.479040 | 7.1:-87116067 | MS.gene92219:CDS |
| GATGCCTTTGTCCGTATCAT+CGG | 0.484184 | 7.1:-87114969 | MS.gene92219:CDS |
| GGTGTGGTGGCTCCATTCGT+TGG | 0.494094 | 7.1:-87116085 | MS.gene92219:CDS |
| CTTTGTTGACCTTTGTAACT+GGG | 0.514716 | 7.1:+87116041 | None:intergenic |
| TCTCAAATTTAGTAGACTGC+AGG | 0.515110 | 7.1:+87114897 | None:intergenic |
| CGTGAGAACCACAGTTCACC+AGG | 0.516570 | 7.1:-87115098 | MS.gene92219:CDS |
| AATACCTTATAAGGAAGGGA+TGG | 0.520774 | 7.1:-87115431 | MS.gene92219:CDS |
| TGTAGTAGCCATAGCTGAAG+AGG | 0.528664 | 7.1:+87116135 | None:intergenic |
| TCCACCATTGCTTGTAATGG+AGG | 0.530318 | 7.1:+87116012 | None:intergenic |
| AGTTGAATACCTTATAAGGA+AGG | 0.536755 | 7.1:-87115436 | MS.gene92219:CDS |
| CGTGCCTCTTCGGTACAATC+CGG | 0.544084 | 7.1:-87116106 | MS.gene92219:CDS |
| TATCGTCCGTCATAATATCC+TGG | 0.568438 | 7.1:+87115080 | None:intergenic |
| TTCGGTACAATCCGGTGTGG+TGG | 0.568868 | 7.1:-87116098 | MS.gene92219:CDS |
| ATTCGTTGGACTCAAGTCCA+TGG | 0.570332 | 7.1:-87116071 | MS.gene92219:CDS |
| CGTTGTCGAATCCGATGATA+CGG | 0.579522 | 7.1:+87114958 | None:intergenic |
| CTGGTGAACTGTGGTTCTCA+CGG | 0.583102 | 7.1:+87115099 | None:intergenic |
| ATACCTTATAAGGAAGGGAT+GGG | 0.588445 | 7.1:-87115430 | MS.gene92219:CDS |
| GTTGAATACCTTATAAGGAA+GGG | 0.588887 | 7.1:-87115435 | MS.gene92219:CDS |
| GGCTGGCTTCCCAGTTACAA+AGG | 0.593536 | 7.1:-87116050 | MS.gene92219:CDS |
| GCATCAGTTGCTCCAAACAA+AGG | 0.598394 | 7.1:+87115038 | None:intergenic |
| AATTGTTCTCTGGTCAATGG+TGG | 0.600961 | 7.1:+87115468 | None:intergenic |
| ATTACCTCCATTACAAGCAA+TGG | 0.604904 | 7.1:-87116016 | MS.gene92219:CDS |
| AGCTGAAGAGGAAATCATAG+AGG | 0.609922 | 7.1:+87116147 | None:intergenic |
| TTGCTTGGAATTTGAGACCG+AGG | 0.613015 | 7.1:-87115403 | MS.gene92219:intron |
| ACCTCCATTACAAGCAATGG+TGG | 0.613355 | 7.1:-87116013 | MS.gene92219:CDS |
| TGTAACTGGGAAGCCAGCCA+TGG | 0.615947 | 7.1:+87116054 | None:intergenic |
| GTTCTCTGGTCAATGGTGGA+AGG | 0.618328 | 7.1:+87115472 | None:intergenic |
| CATAATATCCTGGTGAACTG+TGG | 0.619939 | 7.1:+87115090 | None:intergenic |
| ATGGACTTGAGTCCAACGAA+TGG | 0.633343 | 7.1:+87116073 | None:intergenic |
| TGGAAGAGTAAACTGCATGC+AGG | 0.652563 | 7.1:-87115993 | MS.gene92219:intron |
| TGATACGGACAAAGGCATCA+GGG | 0.656050 | 7.1:+87114973 | None:intergenic |
| CTCTTCGGTACAATCCGGTG+TGG | 0.656316 | 7.1:-87116101 | MS.gene92219:CDS |
| AACGAATGGAGCCACCACAC+CGG | 0.660462 | 7.1:+87116087 | None:intergenic |
| CGGATTGTACCGAAGAGGCA+CGG | 0.664722 | 7.1:+87116107 | None:intergenic |
| AGTTCACCAGGATATTATGA+CGG | 0.673439 | 7.1:-87115086 | MS.gene92219:CDS |
| CACACCGGATTGTACCGAAG+AGG | 0.687657 | 7.1:+87116102 | None:intergenic |
| GAATCCGATGATACGGACAA+AGG | 0.687909 | 7.1:+87114965 | None:intergenic |
| ACGGACGATACTGGACAATG+TGG | 0.708236 | 7.1:-87115067 | MS.gene92219:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAGTTGAAAACAATTTA+TGG | + | chr7.1:87115219-87115238 | None:intergenic | 15.0% |
| !! | ATTAACAATCAAAACTCAAA+AGG | + | chr7.1:87115774-87115793 | None:intergenic | 20.0% |
| !! | TTAACAATCAAAACTCAAAA+GGG | + | chr7.1:87115773-87115792 | None:intergenic | 20.0% |
| !!! | CTCAAATGGATTTTAAATAA+AGG | + | chr7.1:87115890-87115909 | None:intergenic | 20.0% |
| !!! | TAACCTTTTTGATCAATTTT+AGG | - | chr7.1:87115521-87115540 | MS.gene92219:intron | 20.0% |
| !!! | TTTGATTGTTAATTTGTTTG+AGG | - | chr7.1:87115781-87115800 | MS.gene92219:intron | 20.0% |
| ! | AAGAAGTTGAATACCTTATA+AGG | - | chr7.1:87115619-87115638 | MS.gene92219:intron | 25.0% |
| ! | AAGTTATCTTAAGAGCTTAT+GGG | + | chr7.1:87115242-87115261 | None:intergenic | 25.0% |
| ! | ACACCTAAAATTGATCAAAA+AGG | + | chr7.1:87115527-87115546 | None:intergenic | 25.0% |
| ! | AGTAAATGAATATTAGACCT+CGG | + | chr7.1:87115676-87115695 | None:intergenic | 25.0% |
| ! | TAAGCTCTTAAGATAACTTA+TGG | - | chr7.1:87115243-87115262 | MS.gene92219:intron | 25.0% |
| ! | TAAGTTATCTTAAGAGCTTA+TGG | + | chr7.1:87115243-87115262 | None:intergenic | 25.0% |
| ! | TACTTCAGTTTACAAGAAAA+AGG | + | chr7.1:87115107-87115126 | None:intergenic | 25.0% |
| !!! | AAAATCCATTTGAGTTTTGA+TGG | - | chr7.1:87115896-87115915 | MS.gene92219:intron | 25.0% |
| !!! | TTTTTGATCAATTTTAGGTG+TGG | - | chr7.1:87115526-87115545 | MS.gene92219:intron | 25.0% |
| AGTTGAATACCTTATAAGGA+AGG | - | chr7.1:87115623-87115642 | MS.gene92219:intron | 30.0% | |
| CTTGCATGAACTTTATTCAT+AGG | + | chr7.1:87115403-87115422 | None:intergenic | 30.0% | |
| GTTAACCATCAAAACTCAAA+TGG | + | chr7.1:87115904-87115923 | None:intergenic | 30.0% | |
| GTTGAATACCTTATAAGGAA+GGG | - | chr7.1:87115624-87115643 | MS.gene92219:intron | 30.0% | |
| TCAAACTTCTACTTTCCAAT+AGG | + | chr7.1:87115555-87115574 | None:intergenic | 30.0% | |
| ! | ATGATAAGGGAGATTTTGAA+GGG | - | chr7.1:87115428-87115447 | MS.gene92219:CDS | 30.0% |
| !! | ATATAATCGTTGTTTTGTCG+CGG | - | chr7.1:87115715-87115734 | MS.gene92219:intron | 30.0% |
| !! | TAATTTGTTTGAGGTTGATG+TGG | - | chr7.1:87115790-87115809 | MS.gene92219:intron | 30.0% |
| !!! | GTACATATTTTGGTACTAGA+AGG | - | chr7.1:87115465-87115484 | MS.gene92219:CDS | 30.0% |
| AACTTCTACTTTCCAATAGG+AGG | + | chr7.1:87115552-87115571 | None:intergenic | 35.0% | |
| AATACCTTATAAGGAAGGGA+TGG | - | chr7.1:87115628-87115647 | MS.gene92219:intron | 35.0% | |
| AGTTCACCAGGATATTATGA+CGG | - | chr7.1:87115973-87115992 | MS.gene92219:intron | 35.0% | |
| ATACCTTATAAGGAAGGGAT+GGG | - | chr7.1:87115629-87115648 | MS.gene92219:intron | 35.0% | |
| ATTACCTCCATTACAAGCAA+TGG | - | chr7.1:87115043-87115062 | MS.gene92219:CDS | 35.0% | |
| CATGCAAGCTTACATGATAA+GGG | - | chr7.1:87115415-87115434 | MS.gene92219:CDS | 35.0% | |
| CTTTGTTGACCTTTGTAACT+GGG | + | chr7.1:87115021-87115040 | None:intergenic | 35.0% | |
| GGTTACTTGAATAGCACTAA+TGG | - | chr7.1:87115486-87115505 | MS.gene92219:CDS | 35.0% | |
| TATGATTTCCTCTTCAGCTA+TGG | - | chr7.1:87114916-87114935 | MS.gene92219:CDS | 35.0% | |
| TCATGCAAGCTTACATGATA+AGG | - | chr7.1:87115414-87115433 | MS.gene92219:CDS | 35.0% | |
| TCTTTGTTGACCTTTGTAAC+TGG | + | chr7.1:87115022-87115041 | None:intergenic | 35.0% | |
| ! | CATGATAAGGGAGATTTTGA+AGG | - | chr7.1:87115427-87115446 | MS.gene92219:CDS | 35.0% |
| !! | TGATAAGGGAGATTTTGAAG+GGG | - | chr7.1:87115429-87115448 | MS.gene92219:CDS | 35.0% |
| AATTGTTCTCTGGTCAATGG+TGG | + | chr7.1:87115594-87115613 | None:intergenic | 40.0% | |
| ACCATTGACCAGAGAACAAT+TGG | - | chr7.1:87115593-87115612 | MS.gene92219:intron | 40.0% | |
| AGCTGAAGAGGAAATCATAG+AGG | + | chr7.1:87114915-87114934 | None:intergenic | 40.0% | |
| ATGTGGAAGTTGCCTTTGTT+TGG | - | chr7.1:87116009-87116028 | MS.gene92219:CDS | 40.0% | |
| CAAATTTGTGACTGTGACCT+TGG | + | chr7.1:87115741-87115760 | None:intergenic | 40.0% | |
| CATAATATCCTGGTGAACTG+TGG | + | chr7.1:87115972-87115991 | None:intergenic | 40.0% | |
| CCACATTTCGACAGCAATTA+TGG | + | chr7.1:87115816-87115835 | None:intergenic | 40.0% | |
| CCATAATTGCTGTCGAAATG+TGG | - | chr7.1:87115813-87115832 | MS.gene92219:intron | 40.0% | |
| CTACTTGCTTACTTGCAGAA+AGG | - | chr7.1:87115928-87115947 | MS.gene92219:intron | 40.0% | |
| TATCGTCCGTCATAATATCC+TGG | + | chr7.1:87115982-87116001 | None:intergenic | 40.0% | |
| TCTTCCACCATTGCTTGTAA+TGG | + | chr7.1:87115053-87115072 | None:intergenic | 40.0% | |
| TTCTTTCGCCAATTGTTCTC+TGG | + | chr7.1:87115604-87115623 | None:intergenic | 40.0% | |
| !! | GATATTATGACGGACGATAC+TGG | - | chr7.1:87115983-87116002 | MS.gene92219:intron | 40.0% |
| !! | TGATGCTTCTCAAGTGTTGA+AGG | - | chr7.1:87116038-87116057 | MS.gene92219:CDS | 40.0% |
| AAAGGTCCGTGACTATGATC+AGG | + | chr7.1:87115872-87115891 | None:intergenic | 45.0% | |
| AAGGTCCGTGACTATGATCA+GGG | + | chr7.1:87115871-87115890 | None:intergenic | 45.0% | |
| ACCTCCATTACAAGCAATGG+TGG | - | chr7.1:87115046-87115065 | MS.gene92219:CDS | 45.0% | |
| ATGGACTTGAGTCCAACGAA+TGG | + | chr7.1:87114989-87115008 | None:intergenic | 45.0% | |
| ATTCGTTGGACTCAAGTCCA+TGG | - | chr7.1:87114988-87115007 | MS.gene92219:CDS | 45.0% | |
| CAACCCATCCCTTCCTTATA+AGG | + | chr7.1:87115635-87115654 | None:intergenic | 45.0% | |
| CGTTGTCGAATCCGATGATA+CGG | + | chr7.1:87116104-87116123 | None:intergenic | 45.0% | |
| GAATCCGATGATACGGACAA+AGG | + | chr7.1:87116097-87116116 | None:intergenic | 45.0% | |
| GATGCCTTTGTCCGTATCAT+CGG | - | chr7.1:87116090-87116109 | MS.gene92219:CDS | 45.0% | |
| GCATCAGTTGCTCCAAACAA+AGG | + | chr7.1:87116024-87116043 | None:intergenic | 45.0% | |
| GCCAATTGTTCTCTGGTCAA+TGG | + | chr7.1:87115597-87115616 | None:intergenic | 45.0% | |
| TACAGTTAACCGTGCCTCTT+CGG | - | chr7.1:87114943-87114962 | MS.gene92219:CDS | 45.0% | |
| TCCACCATTGCTTGTAATGG+AGG | + | chr7.1:87115050-87115069 | None:intergenic | 45.0% | |
| TGGAAGAGTAAACTGCATGC+AGG | - | chr7.1:87115066-87115085 | MS.gene92219:CDS | 45.0% | |
| TGTAGTAGCCATAGCTGAAG+AGG | + | chr7.1:87114927-87114946 | None:intergenic | 45.0% | |
| ! | TTGCTTGGAATTTGAGACCG+AGG | - | chr7.1:87115656-87115675 | MS.gene92219:intron | 45.0% |
| !! | AAGGGAGATTTTGAAGGGGT+GGG | - | chr7.1:87115433-87115452 | MS.gene92219:CDS | 45.0% |
| !! | ATGATACGGACAAAGGCATC+AGG | + | chr7.1:87116090-87116109 | None:intergenic | 45.0% |
| !! | TAAGGGAGATTTTGAAGGGG+TGG | - | chr7.1:87115432-87115451 | MS.gene92219:CDS | 45.0% |
| !! | TGATACGGACAAAGGCATCA+GGG | + | chr7.1:87116089-87116108 | None:intergenic | 45.0% |
| !! | TTTTAGGTGTGGCCTCCTAT+TGG | - | chr7.1:87115537-87115556 | MS.gene92219:intron | 45.0% |
| ACGGACGATACTGGACAATG+TGG | - | chr7.1:87115992-87116011 | MS.gene92219:intron | 50.0% | |
| CTGGTGAACTGTGGTTCTCA+CGG | + | chr7.1:87115963-87115982 | None:intergenic | 50.0% | |
| TGATCAGGGACGCGACATAA+CGG | + | chr7.1:87115857-87115876 | None:intergenic | 50.0% | |
| ! | GTTCTCTGGTCAATGGTGGA+AGG | + | chr7.1:87115590-87115609 | None:intergenic | 50.0% |
| !! | AGGGAGATTTTGAAGGGGTG+GGG | - | chr7.1:87115434-87115453 | MS.gene92219:CDS | 50.0% |
| AACGAATGGAGCCACCACAC+CGG | + | chr7.1:87114975-87114994 | None:intergenic | 55.0% | |
| CACACCGGATTGTACCGAAG+AGG | + | chr7.1:87114960-87114979 | None:intergenic | 55.0% | |
| CGCGTCCCTGATCATAGTCA+CGG | - | chr7.1:87115863-87115882 | MS.gene92219:intron | 55.0% | |
| CGGATTGTACCGAAGAGGCA+CGG | + | chr7.1:87114955-87114974 | None:intergenic | 55.0% | |
| CGTGAGAACCACAGTTCACC+AGG | - | chr7.1:87115961-87115980 | MS.gene92219:intron | 55.0% | |
| CGTGCCTCTTCGGTACAATC+CGG | - | chr7.1:87114953-87114972 | MS.gene92219:CDS | 55.0% | |
| CTCTTCGGTACAATCCGGTG+TGG | - | chr7.1:87114958-87114977 | MS.gene92219:CDS | 55.0% | |
| GTTGGACTCAAGTCCATGGC+TGG | - | chr7.1:87114992-87115011 | MS.gene92219:CDS | 55.0% | |
| TGTAACTGGGAAGCCAGCCA+TGG | + | chr7.1:87115008-87115027 | None:intergenic | 55.0% | |
| TTCGGTACAATCCGGTGTGG+TGG | - | chr7.1:87114961-87114980 | MS.gene92219:CDS | 55.0% | |
| !! | AGATTTTGAAGGGGTGGGGG+CGG | - | chr7.1:87115438-87115457 | MS.gene92219:CDS | 55.0% |
| !! | GAAGGGATGGGTTGCTTGCT+TGG | - | chr7.1:87115641-87115660 | MS.gene92219:intron | 55.0% |
| !! | GGCTGGCTTCCCAGTTACAA+AGG | - | chr7.1:87115009-87115028 | MS.gene92219:CDS | 55.0% |
| !! | GGGAGATTTTGAAGGGGTGG+GGG | - | chr7.1:87115435-87115454 | MS.gene92219:CDS | 55.0% |
| !! | TCGTTGTTTTGTCGCGGCCA+AGG | - | chr7.1:87115721-87115740 | MS.gene92219:intron | 55.0% |
| GGTGTGGTGGCTCCATTCGT+TGG | - | chr7.1:87114974-87114993 | MS.gene92219:CDS | 60.0% | |
| !! | ATTTTGAAGGGGTGGGGGCG+GGG | - | chr7.1:87115440-87115459 | MS.gene92219:CDS | 60.0% |
| !! | GATTTTGAAGGGGTGGGGGC+GGG | - | chr7.1:87115439-87115458 | MS.gene92219:CDS | 60.0% |
| !! | GGGCGGGGGGGTACATATTT+TGG | - | chr7.1:87115455-87115474 | MS.gene92219:CDS | 60.0% |
| !! | TTTTGAAGGGGTGGGGGCGG+GGG | - | chr7.1:87115441-87115460 | MS.gene92219:CDS | 65.0% |
| TTTGAAGGGGTGGGGGCGGG+GGG | - | chr7.1:87115442-87115461 | MS.gene92219:CDS | 70.0% | |
| TTGAAGGGGTGGGGGCGGGG+GGG | - | chr7.1:87115443-87115462 | MS.gene92219:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 87114905 | 87116176 | 87114905 | ID=MS.gene92219 |
| chr7.1 | mRNA | 87114905 | 87116176 | 87114905 | ID=MS.gene92219.t1;Parent=MS.gene92219 |
| chr7.1 | exon | 87115994 | 87116176 | 87115994 | ID=MS.gene92219.t1.exon1;Parent=MS.gene92219.t1 |
| chr7.1 | CDS | 87115994 | 87116176 | 87115994 | ID=cds.MS.gene92219.t1;Parent=MS.gene92219.t1 |
| chr7.1 | exon | 87115404 | 87115514 | 87115404 | ID=MS.gene92219.t1.exon2;Parent=MS.gene92219.t1 |
| chr7.1 | CDS | 87115404 | 87115514 | 87115404 | ID=cds.MS.gene92219.t1;Parent=MS.gene92219.t1 |
| chr7.1 | exon | 87114905 | 87115135 | 87114905 | ID=MS.gene92219.t1.exon3;Parent=MS.gene92219.t1 |
| chr7.1 | CDS | 87114905 | 87115135 | 87114905 | ID=cds.MS.gene92219.t1;Parent=MS.gene92219.t1 |
| Gene Sequence |
| Protein sequence |
