AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0716970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0716970 MtrunA17_Chr5g0404741 98.462 650 10 0 170 819 250 899 0.0 1308
Msa0716970 MtrunA17_Chr5g0404741 93.529 170 11 0 1 170 1 170 5.71e-101 335
Msa0716970 MtrunA17_Chr2g0299001 39.470 679 350 21 170 811 251 905 6.52e-116 375
Msa0716970 MtrunA17_Chr7g0219851 36.614 691 372 18 170 811 245 918 8.04e-109 357
Msa0716970 MtrunA17_Chr7g0219851 30.899 178 103 6 1 173 3 165 3.49e-15 80.5
Msa0716970 MtrunA17_Chr3g0101321 35.780 654 375 18 171 807 257 882 1.80e-95 320
Msa0716970 MtrunA17_Chr5g0410001 34.691 663 380 13 168 804 246 881 2.28e-95 321
Msa0716970 MtrunA17_Chr1g0151481 34.118 680 390 17 162 811 253 904 4.65e-95 320
Msa0716970 MtrunA17_Chr3g0112511 34.724 671 397 15 161 815 242 887 4.17e-93 314
Msa0716970 MtrunA17_Chr5g0410021 34.789 664 397 16 168 812 242 888 1.66e-89 305
Msa0716970 MtrunA17_Chr4g0037421 33.384 662 389 16 170 800 312 952 3.86e-89 304
Msa0716970 MtrunA17_Chr5g0410031 33.830 671 379 16 168 804 247 886 1.71e-88 302
Msa0716970 MtrunA17_Chr3g0081391 33.434 664 393 18 166 804 257 896 8.38e-88 300
Msa0716970 MtrunA17_Chr5g0409991 34.251 654 395 16 175 812 252 886 8.90e-87 297
Msa0716970 MtrunA17_Chr3g0101011 32.296 675 411 15 161 811 262 914 2.59e-86 296
Msa0716970 MtrunA17_Chr3g0081341 32.375 661 398 15 172 807 327 963 2.18e-85 294
Msa0716970 MtrunA17_Chr3g0081361 33.080 659 389 14 174 807 274 905 2.36e-85 294
Msa0716970 MtrunA17_Chr3g0080731 32.084 667 406 14 165 807 257 900 7.95e-85 291
Msa0716970 MtrunA17_Chr3g0080741 31.065 676 408 15 165 807 252 902 3.28e-83 287
Msa0716970 MtrunA17_Chr3g0094301 32.375 661 398 15 172 807 264 900 4.98e-83 286
Msa0716970 MtrunA17_Chr7g0229761 32.375 661 398 15 172 807 264 900 4.98e-83 286
Msa0716970 MtrunA17_Chr3g0080601 32.473 659 400 14 172 807 263 899 1.05e-82 286
Msa0716970 MtrunA17_Chr3g0100731 31.571 662 413 11 170 815 15 652 5.05e-82 278
Msa0716970 MtrunA17_Chr3g0080771 32.722 654 394 15 177 807 269 899 9.47e-82 283
Msa0716970 MtrunA17_Chr5g0409971 33.735 664 399 17 170 812 248 891 1.51e-81 283
Msa0716970 MtrunA17_Chr3g0080791 32.331 665 392 16 172 807 264 899 1.81e-81 282
Msa0716970 MtrunA17_Chr3g0080791 27.103 214 128 8 1 197 1 203 5.68e-11 66.6
Msa0716970 MtrunA17_Chr3g0100851 31.905 677 400 15 158 815 138 772 2.17e-81 279
Msa0716970 MtrunA17_Chr3g0081371 32.628 662 404 13 165 806 265 904 3.20e-81 281
Msa0716970 MtrunA17_Chr3g0080751 31.111 675 411 13 161 807 253 901 7.60e-81 281
Msa0716970 MtrunA17_Chr3g0080721 30.149 670 399 13 172 807 2 636 1.50e-80 274
Msa0716970 MtrunA17_Chr3g0100961 32.725 657 406 12 170 815 260 891 9.48e-79 274
Msa0716970 MtrunA17_Chr3g0081191 32.159 653 398 14 174 805 265 893 1.69e-77 271
Msa0716970 MtrunA17_Chr3g0101271 31.889 646 404 14 170 803 238 859 1.94e-77 270
Msa0716970 MtrunA17_Chr3g0100831 32.012 656 412 14 169 815 262 892 3.38e-77 270
Msa0716970 MtrunA17_Chr3g0101241 31.889 646 404 14 170 803 238 859 4.03e-77 269
Msa0716970 MtrunA17_Chr3g0101391 32.328 597 363 11 229 804 1 577 1.42e-76 261
Msa0716970 MtrunA17_Chr1g0189351 33.117 616 351 16 169 750 259 847 6.86e-76 266
Msa0716970 MtrunA17_Chr3g0080651 29.142 851 520 26 1 807 4 815 6.45e-75 262
Msa0716970 MtrunA17_Chr3g0101181 31.579 665 411 16 161 800 259 904 1.47e-74 263
Msa0716970 MtrunA17_Chr3g0081211 30.986 710 418 16 172 856 262 924 4.87e-74 261
Msa0716970 MtrunA17_Chr3g0101331 30.271 664 416 13 170 805 262 906 7.66e-73 258
Msa0716970 MtrunA17_Chr3g0101221 32.006 653 391 19 175 799 269 896 1.13e-72 257
Msa0716970 MtrunA17_Chr3g0100801 32.040 593 333 13 174 747 229 770 2.37e-72 253
Msa0716970 MtrunA17_Chr1g0197241 32.593 675 387 20 177 805 882 1534 2.75e-72 260
Msa0716970 MtrunA17_Chr3g0101231 30.816 662 419 15 161 803 260 901 8.74e-71 252
Msa0716970 MtrunA17_Chr3g0081181 31.858 678 413 14 161 815 241 892 1.05e-70 251
Msa0716970 MtrunA17_Chr3g0101201 31.184 667 399 22 170 807 262 897 1.76e-70 251
Msa0716970 MtrunA17_Chr3g0080631 28.959 663 387 14 165 807 257 855 1.31e-68 245
Msa0716970 MtrunA17_Chr3g0080631 28.774 212 127 7 1 197 1 203 5.53e-11 66.6
Msa0716970 MtrunA17_Chr3g0100681 32.246 552 292 15 174 689 77 582 4.49e-68 237
Msa0716970 MtrunA17_Chr1g0197201 31.548 672 385 23 187 804 695 1345 2.67e-63 233
Msa0716970 MtrunA17_Chr3g0100971 34.834 422 245 10 170 580 257 659 3.06e-62 224
Msa0716970 MtrunA17_Chr3g0100761 34.360 422 247 10 170 580 217 619 5.74e-61 220
Msa0716970 MtrunA17_Chr3g0101251 26.322 870 518 24 34 815 33 867 8.70e-59 217
Msa0716970 MtrunA17_Chr3g0084351 33.590 390 234 8 165 546 182 554 1.82e-56 204
Msa0716970 MtrunA17_Chr3g0087701 31.343 670 386 27 170 801 243 876 1.94e-54 205
Msa0716970 MtrunA17_Chr3g0101211 33.065 372 230 6 166 533 47 403 2.53e-53 191
Msa0716970 MtrunA17_Chr3g0086161 30.120 664 384 26 178 796 244 872 3.37e-53 201
Msa0716970 MtrunA17_Chr8g0344071 31.596 633 396 15 188 807 540 1148 9.78e-53 200
Msa0716970 MtrunA17_Chr8g0352831 30.643 669 391 25 168 789 256 898 4.21e-52 198
Msa0716970 MtrunA17_Chr3g0085501 30.091 658 391 22 178 795 262 890 1.28e-51 196
Msa0716970 MtrunA17_Chr5g0446611 31.929 617 355 25 188 767 272 860 1.38e-51 195
Msa0716970 MtrunA17_Chr3g0086221 30.370 675 387 28 170 801 240 874 1.44e-51 196
Msa0716970 MtrunA17_Chr3g0090651 29.525 674 379 31 183 802 266 897 2.52e-50 192
Msa0716970 MtrunA17_Chr1g0164391 26.322 908 491 37 35 803 40 908 2.75e-50 192
Msa0716970 MtrunA17_Chr3g0087541 31.108 659 391 22 180 801 264 896 3.26e-50 192
Msa0716970 MtrunA17_Chr1g0189271 41.667 228 124 4 169 390 99 323 3.95e-50 179
Msa0716970 MtrunA17_Chr1g0164581 27.156 858 502 32 46 805 50 882 4.82e-50 192
Msa0716970 MtrunA17_Chr1g0164611 34.056 461 267 16 183 625 270 711 6.65e-50 191
Msa0716970 MtrunA17_Chr3g0082131 30.211 662 403 24 183 805 265 906 7.16e-50 191
Msa0716970 MtrunA17_Chr3g0086181 30.461 673 385 29 170 801 241 871 7.97e-50 190
Msa0716970 MtrunA17_Chr3g0082311 32.850 414 236 12 183 579 266 654 1.07e-49 191
Msa0716970 MtrunA17_Chr3g0086151 30.473 676 382 30 170 801 241 872 1.26e-49 189
Msa0716970 MtrunA17_Chr1g0197181 31.969 513 297 15 339 806 3 508 1.53e-49 183
Msa0716970 MtrunA17_Chr3g0085471 30.938 640 378 24 191 800 275 880 1.70e-49 190
Msa0716970 MtrunA17_Chr4g0009781 28.872 665 385 23 168 805 238 841 1.72e-49 189
Msa0716970 MtrunA17_Chr3g0085561 30.815 675 382 26 179 802 232 872 1.88e-49 189
Msa0716970 MtrunA17_Chr3g0090691 31.446 671 369 31 183 802 266 896 2.34e-49 189
Msa0716970 MtrunA17_Chr3g0087581 30.714 700 395 30 152 800 214 874 3.57e-49 189
Msa0716970 MtrunA17_Chr3g0084971 31.083 637 365 24 190 783 263 868 4.00e-49 189
Msa0716970 MtrunA17_Chr3g0084051 31.783 645 368 28 191 801 275 881 4.62e-49 188
Msa0716970 MtrunA17_Chr8g0355411 26.549 791 441 26 1 694 7 754 5.52e-49 187
Msa0716970 MtrunA17_Chr3g0085451 29.774 665 389 25 178 800 234 862 6.54e-49 188
Msa0716970 MtrunA17_Chr3g0086091 30.827 665 376 29 183 801 60 686 8.19e-49 187
Msa0716970 MtrunA17_Chr3g0087731 29.892 649 376 24 180 800 57 654 9.31e-49 186
Msa0716970 MtrunA17_Chr3g0085331 30.285 667 390 24 179 802 263 897 1.06e-48 187
Msa0716970 MtrunA17_Chr3g0091061 30.240 668 382 31 183 802 266 897 1.07e-48 187
Msa0716970 MtrunA17_Chr3g0090431 35.452 409 230 16 183 579 138 524 1.34e-48 187
Msa0716970 MtrunA17_Chr3g0091081 30.015 663 387 28 183 802 266 894 3.13e-48 186
Msa0716970 MtrunA17_Chr3g0089871 29.565 690 378 28 188 803 270 925 3.99e-48 186
Msa0716970 MtrunA17_Chr3g0089541 29.360 688 386 27 184 803 271 926 7.74e-48 185
Msa0716970 MtrunA17_Chr8g0352861 30.401 648 399 20 183 796 273 902 2.60e-47 183
Msa0716970 MtrunA17_Chr3g0090141 34.069 408 241 15 183 581 266 654 3.16e-47 183
Msa0716970 MtrunA17_Chr3g0085801 29.618 655 366 22 180 801 266 858 4.37e-47 182
Msa0716970 MtrunA17_Chr3g0085651 29.790 668 385 28 178 801 253 880 4.42e-47 182
Msa0716970 MtrunA17_Chr3g0082891 27.184 721 398 24 3 636 2 682 1.28e-46 180
Msa0716970 MtrunA17_Chr3g0082871 31.656 477 293 12 168 633 235 689 1.47e-46 178
Msa0716970 MtrunA17_Chr3g0082351 29.613 672 382 27 183 803 265 896 1.60e-46 181
Msa0716970 MtrunA17_Chr3g0082101 32.599 454 231 13 183 625 270 659 1.82e-46 180
Msa0716970 MtrunA17_Chr3g0089421 28.530 687 399 26 183 803 265 925 2.02e-46 180
Msa0716970 MtrunA17_Chr7g0221481 30.174 633 372 25 170 761 245 848 2.53e-46 179
Msa0716970 MtrunA17_Chr3g0087841 34.474 409 234 16 183 579 266 652 6.40e-46 179
Msa0716970 MtrunA17_Chr3g0089591 30.975 636 368 26 190 803 278 864 7.74e-46 179
Msa0716970 MtrunA17_Chr3g0082811 30.228 569 340 17 168 707 235 775 9.87e-46 176
Msa0716970 MtrunA17_Chr3g0090401 32.599 454 272 18 183 626 477 906 1.60e-45 178
Msa0716970 MtrunA17_Chr3g0090371 33.990 406 239 16 183 579 266 651 1.74e-45 177
Msa0716970 MtrunA17_Chr3g0091011 27.232 896 519 38 1 800 1 859 1.85e-45 177
Msa0716970 MtrunA17_Chr3g0086621 29.395 694 392 31 152 800 231 871 2.34e-45 177
Msa0716970 MtrunA17_Chr3g0082391 31.685 445 274 15 183 618 267 690 3.99e-45 175
Msa0716970 MtrunA17_Chr2g0316291 31.317 463 291 9 188 645 271 711 5.01e-45 176
Msa0716970 MtrunA17_Chr8g0337891 30.556 468 276 15 178 631 256 688 5.58e-45 174
Msa0716970 MtrunA17_Chr4g0010221 29.498 617 368 21 178 775 248 816 6.69e-45 175
Msa0716970 MtrunA17_Chr3g0082881 30.693 505 305 14 149 632 208 688 7.44e-45 174
Msa0716970 MtrunA17_Chr4g0010261 31.084 489 287 13 178 653 248 699 8.49e-45 175
Msa0716970 MtrunA17_Chr4g0025391 34.398 407 226 15 188 579 270 650 8.53e-45 175
Msa0716970 MtrunA17_Chr3g0089911 35.750 400 227 16 190 579 272 651 2.39e-44 171
Msa0716970 MtrunA17_Chr2g0299121 29.222 681 398 27 180 804 257 909 2.43e-44 173
Msa0716970 MtrunA17_Chr5g0414311 29.032 651 405 19 178 802 261 880 2.79e-44 173
Msa0716970 MtrunA17_Chr2g0282991 29.310 638 376 23 188 783 269 873 3.22e-44 173
Msa0716970 MtrunA17_Chr3g0089211 29.394 677 388 26 190 803 320 969 3.29e-44 174
Msa0716970 MtrunA17_Chr2g0309721 35.750 400 224 15 190 579 273 649 3.67e-44 173
Msa0716970 MtrunA17_Chr8g0338671 31.818 418 251 13 173 579 135 529 3.93e-44 169
Msa0716970 MtrunA17_Chr3g0092241 29.619 682 385 29 188 803 271 923 4.70e-44 172
Msa0716970 MtrunA17_Chr3g0085521 29.822 674 384 27 178 801 239 873 5.50e-44 172
Msa0716970 MtrunA17_Chr3g0084031 31.250 656 376 30 183 800 269 887 6.95e-44 172
Msa0716970 MtrunA17_Chr3g0085091 30.475 653 379 31 191 800 263 883 8.67e-44 172
Msa0716970 MtrunA17_Chr1g0189551 26.994 652 372 18 170 804 279 843 1.08e-43 171
Msa0716970 MtrunA17_Chr5g0413811 28.592 682 403 25 163 812 21 650 1.14e-43 169
Msa0716970 MtrunA17_Chr3g0113781 29.664 654 395 24 183 801 45 668 1.29e-43 169
Msa0716970 MtrunA17_Chr5g0431051 29.925 665 395 25 172 800 235 864 2.51e-43 170
Msa0716970 MtrunA17_Chr3g0089251 28.676 680 390 25 190 803 302 952 3.22e-43 171
Msa0716970 MtrunA17_Chr7g0248221 29.985 647 358 20 170 804 258 821 3.83e-43 169
Msa0716970 MtrunA17_Chr6g0468451 30.273 512 309 18 165 662 233 710 5.21e-43 169
Msa0716970 MtrunA17_Chr8g0348931 29.575 683 384 28 188 803 278 930 5.34e-43 169
Msa0716970 MtrunA17_Chr1g0164631 34.963 409 232 14 183 579 274 660 6.96e-43 169
Msa0716970 MtrunA17_Chr3g0113791 29.664 654 395 24 183 801 250 873 7.34e-43 169
Msa0716970 MtrunA17_Chr3g0089961 32.308 455 253 18 183 624 266 678 8.20e-43 168
Msa0716970 MtrunA17_Chr3g0092261 29.394 677 389 27 190 803 317 967 1.21e-42 169
Msa0716970 MtrunA17_Chr5g0417251 31.111 450 276 11 167 610 14 435 1.26e-42 166
Msa0716970 MtrunA17_Chr6g0484551 32.921 404 219 15 183 579 268 626 1.32e-42 167
Msa0716970 MtrunA17_Chr2g0299091 28.447 689 393 27 180 804 231 883 1.53e-42 168
Msa0716970 MtrunA17_Chr3g0089651 32.599 454 250 18 183 624 270 679 1.70e-42 168
Msa0716970 MtrunA17_Chr4g0010251 28.852 610 352 18 191 775 261 813 1.73e-42 167
Msa0716970 MtrunA17_Chr3g0089471 30.612 637 370 27 190 803 274 861 2.46e-42 167
Msa0716970 MtrunA17_Chr6g0456131 32.151 423 250 12 173 579 242 643 2.73e-42 167
Msa0716970 MtrunA17_Chr3g0089761 28.905 685 395 26 183 803 266 922 3.28e-42 167
Msa0716970 MtrunA17_Chr3g0089811 33.259 448 241 17 190 624 273 675 3.34e-42 167
Msa0716970 MtrunA17_Chr3g0089501 34.243 403 229 16 190 579 271 650 4.62e-42 166
Msa0716970 MtrunA17_Chr3g0086741 30.421 641 374 27 161 761 260 868 6.01e-42 165
Msa0716970 MtrunA17_Chr3g0078361 32.514 366 230 11 183 543 82 435 6.89e-42 159
Msa0716970 MtrunA17_Chr1g0169901 29.664 654 386 26 188 795 260 885 1.11e-41 165
Msa0716970 MtrunA17_Chr3g0089601 34.243 403 229 16 190 579 271 650 2.53e-41 164
Msa0716970 MtrunA17_Chr3g0089781 28.801 684 384 28 190 803 273 923 2.65e-41 164
Msa0716970 MtrunA17_Chr3g0082321 27.333 600 342 19 35 579 40 600 2.83e-41 163
Msa0716970 MtrunA17_Chr7g0248531 35.644 404 225 17 188 579 259 639 3.72e-41 163
Msa0716970 MtrunA17_Chr8g0338621 26.935 646 362 21 1 560 1 622 3.84e-41 161
Msa0716970 MtrunA17_Chr4g0010201 29.470 509 279 17 170 653 245 698 5.55e-41 163
Msa0716970 MtrunA17_Chr2g0299101 29.068 633 373 24 180 764 257 861 7.21e-41 162
Msa0716970 MtrunA17_Chr3g0089991 33.824 408 238 15 183 579 270 656 7.31e-41 163
Msa0716970 MtrunA17_Chr1g0147141 27.714 700 399 26 167 800 260 918 7.41e-41 162
Msa0716970 MtrunA17_Chr7g0257201 28.135 654 367 24 169 804 268 836 8.35e-41 162
Msa0716970 MtrunA17_Chr5g0429961 29.658 644 390 24 183 798 249 857 1.06e-40 162
Msa0716970 MtrunA17_Chr2g0299151 28.783 674 382 27 183 796 247 882 1.65e-40 162
Msa0716970 MtrunA17_Chr7g0218941 31.719 413 250 11 173 579 253 639 1.66e-40 161
Msa0716970 MtrunA17_Chr3g0082791 29.758 662 373 29 180 795 264 879 2.00e-40 161
Msa0716970 MtrunA17_Chr5g0430641 28.767 657 396 22 180 802 246 864 3.09e-40 160
Msa0716970 MtrunA17_Chr5g0430511 28.423 672 412 24 166 802 232 869 4.32e-40 160
Msa0716970 MtrunA17_Chr6g0475491 31.206 423 251 13 170 579 251 646 4.75e-40 159
Msa0716970 MtrunA17_Chr6g0467961 30.753 478 275 17 165 628 233 668 4.90e-40 159
Msa0716970 MtrunA17_Chr3g0085131 28.636 667 392 26 177 800 244 869 5.37e-40 160
Msa0716970 MtrunA17_Chr3g0084081 30.841 642 381 27 191 801 275 884 5.65e-40 160
Msa0716970 MtrunA17_Chr5g0430581 29.894 659 378 27 183 802 244 857 6.64e-40 159
Msa0716970 MtrunA17_Chr5g0415471 29.185 675 387 24 169 802 253 877 7.11e-40 159
Msa0716970 MtrunA17_Chr8g0338391 29.526 464 290 15 178 634 255 688 1.70e-39 158
Msa0716970 MtrunA17_Chr8g0346831 26.381 724 406 27 173 805 253 940 3.33e-39 157
Msa0716970 MtrunA17_Chr6g0471941 30.684 453 280 13 170 614 248 674 3.53e-39 157
Msa0716970 MtrunA17_Chr5g0430951 28.636 667 401 26 172 800 235 864 3.99e-39 156
Msa0716970 MtrunA17_Chr3g0085751 29.709 653 385 28 191 800 254 875 8.38e-39 156
Msa0716970 MtrunA17_Chr5g0433771 27.436 667 371 23 158 804 255 828 1.03e-38 155
Msa0716970 MtrunA17_Chr5g0430621 29.085 667 412 21 165 802 231 865 1.27e-38 155
Msa0716970 MtrunA17_Chr3g0123111 31.818 462 279 15 178 632 245 677 2.04e-38 155
Msa0716970 MtrunA17_Chr3g0113481 31.309 527 305 18 183 682 250 746 4.17e-38 153
Msa0716970 MtrunA17_Chr2g0309151 30.913 427 255 14 170 583 37 436 4.29e-38 149
Msa0716970 MtrunA17_Chr3g0083621 27.829 654 382 27 180 783 275 888 4.84e-38 154
Msa0716970 MtrunA17_Chr6g0470021 29.475 648 397 25 165 782 124 741 5.14e-38 153
Msa0716970 MtrunA17_Chr5g0430291 29.483 658 389 26 183 802 249 869 8.22e-38 153
Msa0716970 MtrunA17_Chr5g0430141 29.283 502 300 16 183 661 249 718 9.21e-38 152
Msa0716970 MtrunA17_Chr5g0414201 32.854 417 251 13 167 581 249 638 1.24e-37 152
Msa0716970 MtrunA17_Chr6g0467911 29.839 496 303 19 165 652 229 687 1.55e-37 151
Msa0716970 MtrunA17_Chr8g0338361 31.061 396 239 11 173 557 117 489 1.64e-37 148
Msa0716970 MtrunA17_Chr7g0257221 30.531 452 280 11 169 611 268 694 1.73e-37 151
Msa0716970 MtrunA17_Chr3g0085111 29.129 666 398 32 177 800 243 876 2.76e-37 151
Msa0716970 MtrunA17_Chr3g0083751 26.492 687 414 28 180 812 269 918 2.82e-37 151
Msa0716970 MtrunA17_Chr3g0085161 28.824 680 395 30 171 800 101 741 3.45e-37 151
Msa0716970 MtrunA17_Chr4g0027251 28.350 709 421 32 140 800 200 869 4.46e-37 150
Msa0716970 MtrunA17_Chr8g0352211 26.829 697 404 21 173 800 1249 1908 4.47e-37 151
Msa0716970 MtrunA17_Chr3g0085551 27.812 658 376 22 180 783 140 752 6.61e-37 149
Msa0716970 MtrunA17_Chr6g0470081 31.072 457 281 15 178 628 246 674 8.51e-37 150
Msa0716970 MtrunA17_Chr8g0338261 26.409 674 403 23 178 804 257 884 1.02e-36 149
Msa0716970 MtrunA17_Chr6g0470011 31.020 461 276 16 178 628 246 674 2.31e-36 148
Msa0716970 MtrunA17_Chr6g0468121 31.209 455 269 16 183 628 252 671 2.51e-36 148
Msa0716970 MtrunA17_Chr3g0085931 31.360 456 279 14 178 628 246 672 3.16e-36 148
Msa0716970 MtrunA17_Chr7g0257541 29.621 422 267 12 170 583 268 667 3.96e-36 147
Msa0716970 MtrunA17_Chr5g0414181 28.743 668 400 24 167 802 248 871 1.59e-35 145
Msa0716970 MtrunA17_Chr1g0155321 23.624 872 535 29 13 782 5 847 1.73e-35 145
Msa0716970 MtrunA17_Chr4g0008461 26.597 673 390 22 169 783 234 860 1.89e-35 145
Msa0716970 MtrunA17_Chr5g0429951 28.333 660 400 23 180 802 246 869 1.96e-35 145
Msa0716970 MtrunA17_Chr6g0468021 31.013 474 279 18 165 628 233 668 2.27e-35 145
Msa0716970 MtrunA17_Chr3g0100701 28.726 463 301 11 358 815 284 722 2.43e-35 144
Msa0716970 MtrunA17_Chr5g0430721 26.068 702 389 20 165 802 272 907 3.95e-35 144
Msa0716970 MtrunA17_Chr5g0430441 28.418 651 400 23 183 802 249 864 4.36e-35 144
Msa0716970 MtrunA17_Chr6g0468151 26.057 733 391 26 183 801 248 943 4.39e-35 144
Msa0716970 MtrunA17_Chr6g0468271 29.697 495 295 18 178 656 244 701 4.44e-35 144
Msa0716970 MtrunA17_Chr8g0356251 27.786 691 390 33 180 810 288 929 4.64e-35 144
Msa0716970 MtrunA17_Chr1g0189321 34.426 244 131 5 324 558 14 237 1.19e-34 132
Msa0716970 MtrunA17_Chr1g0155991 24.179 914 527 31 1 800 1 862 1.54e-34 142
Msa0716970 MtrunA17_Chr1g0149071 26.667 510 274 16 166 653 24 455 1.57e-34 138
Msa0716970 MtrunA17_Chr8g0338681 38.785 214 125 4 173 382 29 240 1.94e-34 132
Msa0716970 MtrunA17_Chr7g0244231 29.421 673 391 29 172 802 230 860 2.09e-34 142
Msa0716970 MtrunA17_Chr4g0020501 24.778 900 457 35 49 833 10 804 3.33e-34 141
Msa0716970 MtrunA17_Chr6g0456121 30.296 406 242 13 182 579 249 621 8.08e-34 140
Msa0716970 MtrunA17_Chr3g0083721 26.101 636 389 23 219 804 241 845 8.68e-34 140
Msa0716970 MtrunA17_Chr7g0257191 30.660 424 262 10 169 583 269 669 1.08e-33 139
Msa0716970 MtrunA17_Chr5g0415511 30.394 431 269 11 167 579 249 666 1.37e-33 138
Msa0716970 MtrunA17_Chr1g0169951 31.415 417 248 13 179 583 276 666 2.04e-33 138
Msa0716970 MtrunA17_Chr3g0085171 28.549 648 396 25 178 783 231 853 2.30e-33 139
Msa0716970 MtrunA17_Chr8g0338861 26.765 680 388 22 220 826 7 649 2.36e-33 137
Msa0716970 MtrunA17_Chr3g0100791 29.130 460 283 11 370 815 1 431 3.20e-33 134
Msa0716970 MtrunA17_Chr2g0299141 31.135 379 228 13 218 579 12 374 5.98e-33 132
Msa0716970 MtrunA17_Chr3g0083591 24.883 852 504 31 52 810 60 868 3.05e-32 135
Msa0716970 MtrunA17_Chr4g0051651 27.491 582 329 20 20 556 137 670 4.71e-32 133
Msa0716970 MtrunA17_Chr3g0086071 29.094 519 294 23 322 801 9 492 9.82e-32 132
Msa0716970 MtrunA17_Chr3g0084061 28.380 673 373 29 192 804 267 890 1.04e-31 134
Msa0716970 MtrunA17_Chr8g0338251 30.435 391 241 10 178 558 243 612 1.05e-31 132
Msa0716970 MtrunA17_Chr5g0414231 33.977 259 161 7 163 418 245 496 2.03e-31 129
Msa0716970 MtrunA17_Chr4g0048421 25.991 454 310 13 174 609 236 681 7.80e-31 130
Msa0716970 MtrunA17_Chr3g0096971 37.931 174 102 3 175 342 1 174 1.86e-30 118
Msa0716970 MtrunA17_Chr6g0468101 28.936 470 244 16 178 632 245 639 3.78e-30 128
Msa0716970 MtrunA17_Chr3g0089931 26.681 461 259 15 38 427 44 496 4.66e-30 125
Msa0716970 MtrunA17_Chr3g0091961 30.244 410 234 14 242 633 8 383 5.71e-30 123
Msa0716970 MtrunA17_Chr6g0468111 29.032 403 252 12 183 581 96 468 6.05e-30 125
Msa0716970 MtrunA17_Chr3g0091041 34.643 280 156 13 183 459 266 521 1.14e-29 124
Msa0716970 MtrunA17_Chr3g0080871 30.789 393 250 13 193 579 262 638 1.44e-29 127
Msa0716970 MtrunA17_Chr5g0410481 28.713 505 286 17 190 664 221 681 1.91e-29 126
Msa0716970 MtrunA17_Chr6g0478721 26.957 460 294 16 174 609 154 595 3.01e-29 125
Msa0716970 MtrunA17_Chr1g0168901 26.537 667 399 27 193 810 249 873 3.45e-29 125
Msa0716970 MtrunA17_Chr3g0083681 26.858 592 338 25 242 783 308 854 8.99e-29 124
Msa0716970 MtrunA17_Chr5g0414171 24.330 448 278 12 1 415 1 420 1.35e-28 119
Msa0716970 MtrunA17_Chr5g0415551 30.964 394 243 13 192 579 140 510 1.68e-28 122
Msa0716970 MtrunA17_Chr5g0410161 27.646 463 273 15 191 627 388 814 3.32e-28 122
Msa0716970 MtrunA17_Chr1g0159111 27.660 470 278 19 177 608 240 685 3.50e-28 122
Msa0716970 MtrunA17_Chr3g0091121 27.660 564 342 24 321 841 17 557 3.64e-28 121
Msa0716970 MtrunA17_Chr5g0417301 24.961 637 336 22 5 567 4 572 3.67e-28 120
Msa0716970 MtrunA17_Chr7g0248431 33.206 262 167 6 170 427 258 515 8.20e-28 119
Msa0716970 MtrunA17_Chr4g0048471 25.954 524 326 18 177 655 114 620 8.72e-28 120
Msa0716970 MtrunA17_Chr1g0169941 30.682 264 171 7 170 427 29 286 1.13e-27 115
Msa0716970 MtrunA17_Chr2g0282891 30.411 365 196 10 219 579 10 320 3.02e-27 114
Msa0716970 MtrunA17_Chr3g0091971 25.414 665 377 24 193 810 240 832 5.43e-27 118
Msa0716970 MtrunA17_Chr6g0468331 29.117 419 258 13 178 565 245 655 1.62e-26 116
Msa0716970 MtrunA17_Chr6g0468341 32.773 238 150 6 166 396 230 464 3.97e-26 115
Msa0716970 MtrunA17_Chr5g0410351 29.091 495 285 19 192 664 242 692 7.04e-26 115
Msa0716970 MtrunA17_Chr5g0410261 30.374 428 253 16 222 627 295 699 1.53e-25 114
Msa0716970 MtrunA17_Chr5g0410401 28.063 506 307 16 191 662 100 582 6.46e-25 111
Msa0716970 MtrunA17_Chr3g0082371 30.034 293 167 11 290 579 1 258 9.03e-25 108
Msa0716970 MtrunA17_Chr5g0444301 27.542 472 306 10 348 807 1 448 1.09e-24 108
Msa0716970 MtrunA17_Chr8g0355071 33.068 251 143 9 168 404 62 301 1.37e-24 105
Msa0716970 MtrunA17_Chr5g0410301 28.000 500 302 16 190 664 227 693 5.97e-24 108
Msa0716970 MtrunA17_Chr3g0085431 27.828 557 297 26 282 801 2 490 6.50e-24 106
Msa0716970 MtrunA17_Chr3g0089431 36.318 201 118 6 183 377 270 466 1.15e-23 105
Msa0716970 MtrunA17_Chr4g0071021 33.333 219 133 4 165 373 214 429 2.88e-23 103
Msa0716970 MtrunA17_Chr3g0101171 50.000 84 42 0 339 422 7 90 9.58e-22 91.3
Msa0716970 MtrunA17_Chr8g0351821 34.259 216 133 6 175 385 243 454 1.36e-21 99.4
Msa0716970 MtrunA17_Chr3g0084811 24.211 665 396 27 192 793 420 1039 2.38e-21 100
Msa0716970 MtrunA17_Chr3g0087301 25.496 655 379 23 178 786 257 848 2.54e-21 100
Msa0716970 MtrunA17_Chr3g0083641 27.606 355 208 12 242 579 304 626 4.51e-21 99.8
Msa0716970 MtrunA17_Chr3g0085701 38.384 198 113 5 178 370 245 438 8.51e-21 98.6
Msa0716970 MtrunA17_Chr2g0308491 36.875 160 95 4 196 351 99 256 2.95e-20 91.7
Msa0716970 MtrunA17_Chr7g0255111 27.251 422 250 15 192 579 260 658 5.23e-20 96.3
Msa0716970 MtrunA17_Chr8g0360991 25.783 415 250 13 190 565 249 644 8.18e-19 92.4
Msa0716970 MtrunA17_Chr5g0439121 27.792 403 239 18 190 579 247 610 9.74e-19 92.4
Msa0716970 MtrunA17_Chr5g0430331 34.555 191 110 4 183 363 245 430 1.39e-18 89.4
Msa0716970 MtrunA17_Chr3g0096721 26.258 457 294 19 169 611 227 654 1.82e-18 91.3
Msa0716970 MtrunA17_Chr7g0257251 32.317 164 106 3 237 396 3 165 1.85e-18 84.0
Msa0716970 MtrunA17_Chr2g0313461 27.739 429 251 17 190 585 250 652 3.55e-18 90.1
Msa0716970 MtrunA17_Chr3g0101361 25.720 486 285 16 354 798 286 736 9.90e-18 88.2
Msa0716970 MtrunA17_Chr6g0468201 30.820 305 174 12 328 628 4 275 1.44e-17 87.8
Msa0716970 MtrunA17_Chr4g0010491 35.000 180 104 7 181 351 247 422 2.15e-17 85.9
Msa0716970 MtrunA17_Chr6g0470001 30.820 305 182 11 327 628 3 281 2.50e-17 87.0
Msa0716970 MtrunA17_Chr2g0314301 27.489 462 275 21 184 608 242 680 6.48e-17 86.3
Msa0716970 MtrunA17_Chr5g0414291 35.802 162 99 4 178 337 261 419 8.64e-17 84.0
Msa0716970 MtrunA17_Chr8g0392511 32.314 229 130 10 360 579 1 213 1.02e-16 82.8
Msa0716970 MtrunA17_Chr1g0189511 27.986 293 163 10 272 558 8 258 1.19e-16 81.3
Msa0716970 MtrunA17_Chr3g0105571 26.829 410 253 18 192 584 197 576 1.71e-16 84.0
Msa0716970 MtrunA17_Chr6g0468361 28.438 320 178 12 328 632 4 287 2.57e-16 82.8
Msa0716970 MtrunA17_Chr5g0402671 25.134 561 334 21 174 688 241 761 3.70e-16 83.2
Msa0716970 MtrunA17_Chr3g0100261 25.962 416 252 16 191 568 250 647 4.32e-16 83.6
Msa0716970 MtrunA17_Chr7g0255761 29.811 265 136 8 188 447 106 325 1.21e-15 79.3
Msa0716970 MtrunA17_Chr5g0430901 25.679 405 213 14 172 555 235 572 1.59e-15 81.3
Msa0716970 MtrunA17_Chr1g0172141 24.224 483 283 16 174 609 230 676 1.60e-15 81.6
Msa0716970 MtrunA17_Chr7g0257551 29.412 221 150 5 170 386 192 410 1.92e-15 79.7
Msa0716970 MtrunA17_Chr6g0474801 32.850 207 111 9 219 425 328 506 4.60e-15 79.7
Msa0716970 MtrunA17_Chr6g0480421 23.140 726 446 28 188 886 154 794 7.31e-15 79.3
Msa0716970 MtrunA17_Chr6g0475721 26.841 421 264 17 174 581 230 619 1.19e-14 78.2
Msa0716970 MtrunA17_Chr2g0313481 27.451 459 270 20 190 608 250 685 1.32e-14 78.6
Msa0716970 MtrunA17_Chr6g0479001 34.118 170 95 7 188 352 286 443 1.92e-14 78.2
Msa0716970 MtrunA17_Chr2g0313591 26.611 481 249 20 187 608 247 682 2.30e-14 77.8
Msa0716970 MtrunA17_Chr1g0153981 28.175 252 153 8 189 430 282 515 3.23e-14 77.0
Msa0716970 MtrunA17_Chr3g0081531 22.617 703 423 29 188 842 285 914 3.54e-14 77.4
Msa0716970 MtrunA17_Chr6g0469991 38.400 125 70 4 178 297 246 368 5.18e-14 74.7
Msa0716970 MtrunA17_Chr1g0153991 26.337 243 150 7 189 421 280 503 6.23e-14 76.3
Msa0716970 MtrunA17_Chr3g0092291 32.184 261 124 14 365 612 1 221 7.72e-14 74.7
Msa0716970 MtrunA17_Chr8g0343661 25.176 568 320 20 192 722 2 501 8.53e-14 75.5
Msa0716970 MtrunA17_Chr3g0100781 37.607 117 67 3 170 281 257 372 9.01e-14 73.9
Msa0716970 MtrunA17_Chr2g0313541 26.974 456 275 20 187 608 247 678 1.47e-13 75.5
Msa0716970 MtrunA17_Chr7g0255401 26.698 427 249 17 192 581 199 598 1.93e-13 74.7
Msa0716970 MtrunA17_Chr3g0108151 27.848 237 154 9 190 419 253 479 2.08e-13 74.7
Msa0716970 MtrunA17_Chr8g0338431 27.193 228 138 4 363 583 1 207 2.32e-13 73.9
Msa0716970 MtrunA17_Chr1g0172271 24.242 462 274 15 190 609 251 678 2.97e-13 73.9
Msa0716970 MtrunA17_Chr7g0255411 23.622 381 258 10 190 549 4 372 3.61e-13 72.4
Msa0716970 MtrunA17_Chr5g0402771 25.177 564 337 29 173 688 242 768 4.03e-13 73.6
Msa0716970 MtrunA17_Chr6g0474761 32.367 207 112 9 219 425 328 506 5.86e-13 72.8
Msa0716970 MtrunA17_Chr2g0313431 27.660 423 247 16 187 576 247 643 1.20e-12 71.6
Msa0716970 MtrunA17_Chr3g0102271 28.205 234 143 9 188 418 295 506 1.27e-12 72.0
Msa0716970 MtrunA17_Chr2g0299131 35.156 128 72 3 180 297 94 220 1.97e-12 67.8
Msa0716970 MtrunA17_Chr1g0170881 25.282 443 268 16 174 581 230 644 2.01e-12 71.6
Msa0716970 MtrunA17_Chr3g0081201 28.877 187 126 3 624 807 2 184 2.80e-12 67.4
Msa0716970 MtrunA17_Chr3g0085711 26.923 494 256 26 365 800 1 447 3.11e-12 70.5
Msa0716970 MtrunA17_Chr8g0374351 31.716 268 148 12 177 426 176 426 3.31e-12 70.5
Msa0716970 MtrunA17_Chr1g0189281 25.538 325 215 7 488 796 60 373 4.13e-12 68.9
Msa0716970 MtrunA17_Chr8g0374301 23.993 571 328 26 162 688 248 756 4.63e-12 70.1
Msa0716970 MtrunA17_Chr2g0313521 27.166 427 268 15 173 585 236 633 4.73e-12 70.1
Msa0716970 MtrunA17_Chr8g0374291 24.783 577 316 29 162 688 241 749 6.49e-12 69.7
Msa0716970 MtrunA17_Chr3g0091851 23.097 381 261 14 191 560 186 545 8.58e-12 69.3
Msa0716970 MtrunA17_Chr4g0020411 40.909 110 58 3 242 348 44 149 8.72e-12 63.9
Msa0716970 MtrunA17_Chr1g0163791 24.941 425 253 15 190 581 250 641 1.44e-11 68.9
Msa0716970 MtrunA17_Chr4g0025831 26.190 462 276 17 188 629 296 712 1.76e-11 68.2
Msa0716970 MtrunA17_Chr3g0102261 25.791 632 363 28 188 787 294 851 3.29e-11 67.4
Msa0716970 MtrunA17_Chr6g0479631 23.077 650 364 28 188 802 296 844 3.54e-11 67.4
Msa0716970 MtrunA17_Chr3g0081841 31.667 120 76 3 166 282 93 209 3.55e-11 66.6
Msa0716970 MtrunA17_Chr3g0085721 35.714 140 81 5 178 312 234 369 5.49e-11 65.5
Msa0716970 MtrunA17_Chr2g0330121 29.218 243 148 7 188 430 110 328 5.76e-11 66.6
Msa0716970 MtrunA17_Chr2g0282981 36.207 116 69 3 188 299 269 383 6.58e-11 65.5
Msa0716970 MtrunA17_Chr5g0430341 28.673 422 228 20 408 798 25 404 7.13e-11 65.9
Msa0716970 MtrunA17_Chr4g0020591 25.404 433 227 17 188 579 292 669 7.13e-11 66.6
Msa0716970 MtrunA17_Chr1g0174511 25.061 411 271 16 190 581 250 642 8.17e-11 66.2
Msa0716970 MtrunA17_Chr6g0454951 24.342 456 273 19 184 598 369 793 8.70e-11 66.2
Msa0716970 MtrunA17_Chr2g0299561 25.000 580 310 23 188 691 297 827 9.58e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0716970 AT5G35450.2 35.053 659 386 17 174 815 247 880 2.42e-90 306
Msa0716970 AT5G35450.2 32.593 135 81 2 1 129 1 131 1.80e-11 68.6
Msa0716970 AT5G35450.1 35.053 659 386 17 174 815 247 880 2.42e-90 306
Msa0716970 AT5G35450.1 32.593 135 81 2 1 129 1 131 1.80e-11 68.6
Msa0716970 AT5G43470.3 35.886 666 376 19 171 811 246 885 5.85e-89 303
Msa0716970 AT5G43470.3 31.111 135 83 2 1 129 1 131 1.83e-11 68.6
Msa0716970 AT5G43470.2 35.886 666 376 19 171 811 246 885 5.85e-89 303
Msa0716970 AT5G43470.2 31.111 135 83 2 1 129 1 131 1.83e-11 68.6
Msa0716970 AT5G43470.4 35.886 666 376 19 171 811 246 885 5.85e-89 303
Msa0716970 AT5G43470.4 31.111 135 83 2 1 129 1 131 1.83e-11 68.6
Msa0716970 AT5G43470.1 35.886 666 376 19 171 811 246 885 5.85e-89 303
Msa0716970 AT5G43470.1 31.111 135 83 2 1 129 1 131 1.83e-11 68.6
Msa0716970 AT1G53350.1 34.380 669 384 17 170 811 243 883 2.55e-84 290
Msa0716970 AT1G53350.1 31.053 190 112 4 1 184 1 177 2.14e-11 68.6
Msa0716970 AT5G48620.6 35.250 661 381 18 174 811 249 885 2.09e-83 287
Msa0716970 AT5G48620.6 32.847 137 78 4 1 129 1 131 6.50e-12 70.1
Msa0716970 AT5G48620.1 35.250 661 381 18 174 811 249 885 2.09e-83 287
Msa0716970 AT5G48620.1 32.847 137 78 4 1 129 1 131 6.50e-12 70.1
Msa0716970 AT5G48620.4 35.250 661 381 18 174 811 249 885 2.09e-83 287
Msa0716970 AT5G48620.4 32.847 137 78 4 1 129 1 131 6.50e-12 70.1
Msa0716970 AT5G48620.2 35.250 661 381 18 174 811 249 885 2.09e-83 287
Msa0716970 AT5G48620.2 32.847 137 78 4 1 129 1 131 6.50e-12 70.1
Msa0716970 AT5G48620.3 35.250 661 381 18 174 811 249 885 2.09e-83 287
Msa0716970 AT5G48620.3 32.847 137 78 4 1 129 1 131 6.50e-12 70.1
Msa0716970 AT5G48620.5 35.250 661 381 18 174 811 249 885 2.09e-83 287
Msa0716970 AT5G48620.5 32.847 137 78 4 1 129 1 131 6.50e-12 70.1
Msa0716970 AT3G07040.1 29.784 695 431 16 153 812 221 893 4.23e-78 273
Msa0716970 AT1G58400.3 33.231 653 387 18 174 800 250 879 3.05e-77 270
Msa0716970 AT1G58400.2 33.231 653 387 18 174 800 250 879 3.05e-77 270
Msa0716970 AT3G46710.1 33.229 641 377 19 165 790 240 844 3.49e-77 269
Msa0716970 AT1G58390.1 33.849 647 380 15 174 796 249 871 1.23e-75 266
Msa0716970 AT1G58390.2 33.849 647 380 15 174 796 249 871 1.23e-75 266
Msa0716970 AT1G58400.1 32.466 653 382 18 174 800 250 869 3.76e-72 256
Msa0716970 AT1G59780.2 32.792 677 365 24 159 800 231 852 8.09e-70 249
Msa0716970 AT1G59780.1 32.792 677 365 24 159 800 236 857 1.20e-69 249
Msa0716970 AT1G59620.2 32.526 661 371 18 175 811 112 721 1.56e-68 243
Msa0716970 AT1G59218.1 32.663 646 393 17 164 787 243 868 3.60e-68 246
Msa0716970 AT1G59218.2 32.663 646 393 17 164 787 243 868 3.60e-68 246
Msa0716970 AT1G59218.3 32.663 646 393 17 164 787 243 868 3.60e-68 246
Msa0716970 AT1G58848.1 32.663 646 393 17 164 787 243 868 3.60e-68 246
Msa0716970 AT1G58848.2 32.663 646 393 17 164 787 243 868 3.60e-68 246
Msa0716970 AT1G50180.1 32.885 669 327 23 177 811 254 834 1.84e-67 242
Msa0716970 AT1G50180.1 32.353 170 108 3 1 168 1 165 6.10e-14 76.6
Msa0716970 AT3G46530.1 33.224 608 349 19 169 769 248 805 9.17e-67 239
Msa0716970 AT3G46730.1 31.707 656 355 18 169 790 245 841 1.49e-66 239
Msa0716970 AT1G10920.1 34.472 615 357 14 171 760 121 714 9.18e-65 232
Msa0716970 AT1G10920.2 34.472 615 357 14 171 760 121 714 9.18e-65 232
Msa0716970 AT1G10920.4 34.472 615 357 14 171 760 121 714 9.18e-65 232
Msa0716970 AT1G58410.1 33.436 649 389 18 170 798 244 869 1.84e-62 228
Msa0716970 AT1G58410.4 33.436 649 389 18 170 798 244 869 1.84e-62 228
Msa0716970 AT1G58410.2 33.436 649 389 18 170 798 244 869 1.84e-62 228
Msa0716970 AT1G59124.2 32.031 640 397 13 164 787 243 860 4.46e-62 228
Msa0716970 AT1G59124.2 34.807 181 100 4 628 801 801 970 1.51e-17 88.6
Msa0716970 AT1G58807.1 32.031 640 397 13 164 787 243 860 4.46e-62 228
Msa0716970 AT1G58807.1 34.807 181 100 4 628 801 801 970 1.51e-17 88.6
Msa0716970 AT1G58602.2 32.394 639 380 18 175 787 254 866 1.03e-60 224
Msa0716970 AT1G58602.1 32.394 639 380 18 175 787 254 866 1.03e-60 224
Msa0716970 AT1G59124.1 32.273 629 388 14 164 776 243 849 7.63e-59 217
Msa0716970 AT1G58807.2 32.273 629 388 14 164 776 243 849 7.63e-59 217
Msa0716970 AT1G10920.5 33.156 564 332 13 222 760 1 544 2.58e-50 187
Msa0716970 AT1G10920.3 33.156 564 332 13 222 760 1 544 2.58e-50 187
Msa0716970 AT1G58410.3 31.318 645 376 18 170 798 244 837 6.37e-48 184
Msa0716970 AT3G50950.2 27.786 637 370 21 180 782 249 829 1.74e-45 177
Msa0716970 AT3G50950.1 27.786 637 370 21 180 782 249 829 1.74e-45 177
Msa0716970 AT3G14460.1 27.644 662 399 25 183 795 264 894 4.09e-39 158
Msa0716970 AT3G14470.1 32.675 456 245 21 193 621 279 699 3.16e-38 155
Msa0716970 AT3G14470.2 32.675 456 245 21 193 621 279 699 3.16e-38 155
Msa0716970 AT5G63020.1 26.791 642 379 24 182 786 247 834 6.04e-32 134
Msa0716970 AT1G61190.2 26.667 690 422 26 163 815 226 868 1.20e-31 133
Msa0716970 AT1G61190.3 26.667 690 422 26 163 815 226 868 1.20e-31 133
Msa0716970 AT1G61190.1 26.667 690 422 26 163 815 226 868 1.85e-31 133
Msa0716970 AT1G61310.1 27.126 682 420 26 163 808 227 867 5.43e-30 128
Msa0716970 AT4G26090.1 26.426 666 384 27 183 786 247 868 2.43e-29 126
Msa0716970 AT4G10780.2 25.769 683 400 24 167 798 231 857 2.80e-29 126
Msa0716970 AT4G10780.1 25.769 683 400 24 167 798 231 857 2.91e-29 125
Msa0716970 AT1G61190.4 26.316 684 407 26 163 815 226 843 3.12e-29 125
Msa0716970 AT1G12220.3 23.042 664 392 19 177 786 123 721 5.36e-29 124
Msa0716970 AT1G12220.1 23.042 664 392 19 177 786 244 842 8.78e-29 124
Msa0716970 AT1G12220.2 23.042 664 392 19 177 786 244 842 8.78e-29 124
Msa0716970 AT1G61300.1 26.872 681 425 25 163 815 114 749 7.02e-28 121
Msa0716970 AT1G61180.1 27.071 676 409 29 163 804 225 850 7.88e-27 118
Msa0716970 AT1G61180.2 27.071 676 409 29 163 804 225 850 1.15e-26 117
Msa0716970 AT1G12290.4 28.108 370 229 13 186 538 210 559 4.41e-25 112
Msa0716970 AT1G12290.3 28.108 370 229 13 186 538 210 559 4.41e-25 112
Msa0716970 AT1G12290.2 28.108 370 229 13 186 538 210 559 4.41e-25 112
Msa0716970 AT1G12290.1 28.108 370 229 13 186 538 252 601 4.45e-25 112
Msa0716970 AT4G27190.1 27.384 409 276 12 177 579 232 625 5.25e-25 112
Msa0716970 AT1G61300.2 25.811 678 411 26 163 815 114 724 5.50e-25 112
Msa0716970 AT1G12280.1 26.355 406 260 14 170 559 237 619 8.03e-25 111
Msa0716970 AT4G27220.1 27.384 409 257 16 191 585 216 598 1.08e-24 111
Msa0716970 AT4G27220.2 27.384 409 257 16 191 585 224 606 1.26e-24 111
Msa0716970 AT5G47250.1 24.606 634 387 25 192 786 261 842 1.88e-24 110
Msa0716970 AT5G47260.1 26.651 424 267 14 174 582 228 622 5.57e-24 109
Msa0716970 AT1G12210.3 27.529 425 272 15 184 594 209 611 6.70e-24 108
Msa0716970 AT1G12210.2 27.529 425 272 15 184 594 209 611 6.70e-24 108
Msa0716970 AT1G15890.2 27.358 424 272 15 174 583 78 479 7.30e-24 108
Msa0716970 AT1G12210.1 27.529 425 272 15 184 594 251 653 7.33e-24 108
Msa0716970 AT1G15890.1 27.358 424 272 15 174 583 238 639 1.37e-23 107
Msa0716970 AT5G43730.4 25.481 675 399 29 170 799 232 847 6.03e-23 105
Msa0716970 AT5G43730.1 25.481 675 399 29 170 799 232 847 6.03e-23 105
Msa0716970 AT5G43730.3 25.481 675 399 29 170 799 232 847 6.03e-23 105
Msa0716970 AT5G43730.2 25.481 675 399 29 170 799 232 847 6.03e-23 105
Msa0716970 AT5G43730.5 25.481 675 399 29 170 799 232 847 6.03e-23 105
Msa0716970 AT5G43740.1 26.195 523 332 17 170 681 231 710 9.77e-23 105
Msa0716970 AT5G43740.2 26.195 523 332 17 170 681 231 710 9.77e-23 105
Msa0716970 AT1G63350.4 24.757 618 383 20 184 786 247 797 5.30e-22 102
Msa0716970 AT1G51480.1 25.621 523 316 21 172 657 231 717 9.15e-22 102
Msa0716970 AT1G62630.1 26.194 649 377 30 184 786 247 839 9.89e-22 102
Msa0716970 AT1G63360.2 28.414 454 263 20 184 608 212 632 1.20e-21 101
Msa0716970 AT1G63360.1 28.414 454 263 20 184 608 247 667 1.30e-21 101
Msa0716970 AT1G63350.1 26.136 440 286 14 184 609 247 661 7.47e-20 95.9
Msa0716970 AT1G63350.3 26.136 440 286 14 184 609 247 661 8.62e-20 95.5
Msa0716970 AT1G63350.2 26.136 440 286 14 184 609 247 661 8.62e-20 95.5
Msa0716970 AT5G05400.1 27.014 422 272 16 170 583 236 629 4.68e-18 90.1
Msa0716970 AT5G05400.2 27.014 422 272 16 170 583 67 460 5.01e-18 89.7
Msa0716970 AT5G05400.3 27.014 422 272 16 170 583 67 460 5.01e-18 89.7
Msa0716970 AT5G44510.2 24.189 678 409 20 188 801 315 951 1.84e-16 85.1
Msa0716970 AT5G44510.1 24.189 678 409 20 188 801 315 951 1.89e-16 85.1
Msa0716970 AT5G44510.3 24.189 678 409 20 188 801 315 951 1.98e-16 85.1
Msa0716970 AT5G44510.4 24.189 678 409 20 188 801 315 951 2.81e-16 84.3
Msa0716970 AT1G12280.2 24.069 403 240 15 170 559 199 548 6.76e-15 79.7
Msa0716970 AT1G69550.1 30.225 311 177 10 515 819 873 1149 2.37e-14 78.2
Msa0716970 AT1G69550.1 29.514 288 147 8 515 800 969 1202 9.99e-13 73.2
Msa0716970 AT5G66900.3 27.917 240 148 8 194 424 321 544 2.21e-13 74.3
Msa0716970 AT5G66900.2 27.917 240 148 8 194 424 321 544 4.40e-13 73.9
Msa0716970 AT5G66900.1 27.917 240 148 8 194 424 273 496 6.99e-13 73.2
Msa0716970 AT5G11250.2 24.590 671 392 26 188 806 339 947 3.87e-12 70.9
Msa0716970 AT5G11250.3 24.590 671 392 26 188 806 257 865 3.98e-12 70.9
Msa0716970 AT5G11250.1 24.590 671 392 26 188 806 257 865 3.98e-12 70.9
Msa0716970 AT5G66910.1 25.746 268 171 7 171 426 252 503 4.34e-12 70.5
Msa0716970 AT1G33560.1 25.326 537 300 25 191 688 248 722 6.81e-12 70.1
Msa0716970 AT1G56510.1 29.703 202 122 8 188 386 287 471 4.43e-11 67.4
Msa0716970 AT5G04720.1 30.601 183 110 8 188 365 267 437 5.92e-11 67.0

Find 190 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTACAAACACTTGATTTA+AGG 0.075131 5_1:+10554411 Msa0716970:CDS
AGAAAATACCAAATGTAATT+TGG 0.170625 5_1:+10554450 Msa0716970:CDS
TGGTTGTGCTTGATGATATT+TGG 0.183750 5_1:+10553340 Msa0716970:CDS
CTTAGGCAATTGGGGATAAA+TGG 0.184869 5_1:+10554629 Msa0716970:CDS
AACATTGCATCCATGATAAT+TGG 0.204186 5_1:-10552639 None:intergenic
ACTGATTCAATTAAGGTATC+TGG 0.220116 5_1:+10554331 Msa0716970:CDS
GGTTGTGCTTGATGATATTT+GGG 0.243092 5_1:+10553341 Msa0716970:CDS
AAAACTTAAAATGCTTGTTT+TGG 0.244506 5_1:+10554919 Msa0716970:CDS
AAAGGAAAAGAGGAGTATTT+TGG 0.256008 5_1:+10554023 Msa0716970:CDS
AACCGTAGATGCCCGCTATC+TGG 0.278954 5_1:-10554521 None:intergenic
TTTGGCGGAGAAAAGGTATT+TGG 0.294275 5_1:+10553320 Msa0716970:CDS
TCATGCTGCAGATTGATTTC+CGG 0.297053 5_1:+10555392 Msa0716970:intron
TTAAGAAATCATACCGTTCA+TGG 0.301436 5_1:-10554112 None:intergenic
GAATAAGCTTCATAATGTTT+TGG 0.310508 5_1:+10553302 Msa0716970:CDS
GTGATATCCTTCAGTCCTTC+TGG 0.310871 5_1:-10555115 None:intergenic
AGTCATTCCCAATTAATAAA+AGG 0.312092 5_1:-10555596 None:intergenic
TTTGTTGACGACGAGGATTT+TGG 0.320208 5_1:+10553425 Msa0716970:CDS
GTCTGAATGTTCATACCCTT+TGG 0.322470 5_1:-10553807 None:intergenic
TTTACCAATTCTTTCAATTC+GGG 0.326734 5_1:-10552842 None:intergenic
TAGCAAATATGACCAATCTT+AGG 0.330340 5_1:+10554612 Msa0716970:CDS
CGATCTTCTTAGAGAGCTTT+CGG 0.336786 5_1:+10553995 Msa0716970:CDS
TTAGCTTGCCAAGTACTATA+GGG 0.336858 5_1:+10554306 Msa0716970:CDS
CCATCACGGTCATCAGAGTT+AGG 0.340515 5_1:-10552931 None:intergenic
CATATATTGAGGCTGGAAAC+TGG 0.345931 5_1:+10554573 Msa0716970:CDS
TACTCTTCTTCAGCATAATA+AGG 0.346844 5_1:-10552997 None:intergenic
CAGTTTCCAGCCTCAATATA+TGG 0.349003 5_1:-10554572 None:intergenic
GTTGGAACGGTGAGTTCGTT+GGG 0.353159 5_1:+10553948 Msa0716970:CDS
TATGACCAATCTTAGGCAAT+TGG 0.354334 5_1:+10554619 Msa0716970:CDS
CGTACAAATTCCACAGACTA+TGG 0.354880 5_1:-10555635 None:intergenic
TTGGGGATAAATGGATTATC+AGG 0.358410 5_1:+10554638 Msa0716970:CDS
AGTTCCCGAATTGAAAGAAT+TGG 0.359503 5_1:+10552838 Msa0716970:CDS
GGGAATGACTTCTAATTAAA+CGG 0.361856 5_1:+10555609 Msa0716970:exon
ATGACCAATCTTAGGCAATT+GGG 0.364727 5_1:+10554620 Msa0716970:CDS
GTTAGCTTGCCAAGTACTAT+AGG 0.371939 5_1:+10554305 Msa0716970:CDS
TAGGGGAACTGATTCAATTA+AGG 0.372340 5_1:+10554324 Msa0716970:CDS
CTTAGGAGTAAAGCATTTCC+TGG 0.372626 5_1:+10553525 Msa0716970:CDS
ACCAACTTCCAAATTACATT+TGG 0.376149 5_1:-10554458 None:intergenic
ACCTTAAATCAAGTGTTTGT+AGG 0.376596 5_1:-10554412 None:intergenic
GATTTCCGGCGCAGTGTTGT+TGG 0.377330 5_1:+10555406 Msa0716970:CDS
CTTGCTGTTGTTGTGGTTGG+TGG 0.377725 5_1:+10553618 Msa0716970:CDS
TCTGAATGTTCATACCCTTT+GGG 0.380001 5_1:-10553806 None:intergenic
CCTCTTGCTGTTGTTGTGGT+TGG 0.383236 5_1:+10553615 Msa0716970:CDS
AGGGAAGCATCTTCAAGTTC+TGG 0.387214 5_1:+10555453 Msa0716970:CDS
TTCCCTCACATTGAACAAAT+AGG 0.389888 5_1:+10555700 Msa0716970:three_prime_UTR
ATATGGTAGGCTTTGAAGAT+TGG 0.392112 5_1:-10554555 None:intergenic
CTGCAGAAGTTGTCTTTGAA+TGG 0.394380 5_1:+10554785 Msa0716970:CDS
TATCCCCAATTGCCTAAGAT+TGG 0.394533 5_1:-10554624 None:intergenic
GCTCACTCTTCTGAAAGAAT+TGG 0.397733 5_1:+10555012 Msa0716970:CDS
GCGCAGTGTTGTTGGGTGAT+AGG 0.410018 5_1:+10555414 Msa0716970:CDS
CTAAGTTTATAGAGATGAAA+AGG 0.413960 5_1:-10552817 None:intergenic
CCAACGAACGTGTTCGTATG+TGG 0.420094 5_1:+10552692 Msa0716970:CDS
AAGGTTAGTTTCAACAGATT+CGG 0.426868 5_1:-10554845 None:intergenic
ACCAAATGTAATTTGGAAGT+TGG 0.430885 5_1:+10554457 Msa0716970:CDS
AATGCCATTGCTTGAGTACA+TGG 0.433131 5_1:+10555060 Msa0716970:CDS
ATCAGTTCCCCTATAGTACT+TGG 0.435292 5_1:-10554314 None:intergenic
CAGATATAGACAAGAAAGTC+TGG 0.440967 5_1:+10554189 Msa0716970:CDS
CTGTAGGTGGGAATTATGTA+AGG 0.450216 5_1:-10554864 None:intergenic
AAATGGATTATCAGGACAAA+TGG 0.452782 5_1:+10554646 Msa0716970:CDS
TGTTAGAATTAGACGGTGTT+CGG 0.457637 5_1:+10554279 Msa0716970:CDS
ATGAGAGTTATGCGTTACTT+AGG 0.458960 5_1:+10553508 Msa0716970:CDS
CTGATTCAATTAAGGTATCT+GGG 0.460529 5_1:+10554332 Msa0716970:CDS
AGGGAGTTGCAGAATATTAG+AGG 0.460761 5_1:+10553681 Msa0716970:CDS
GGGAAACTTCCGCTTTCCAT+TGG 0.465170 5_1:+10554377 Msa0716970:CDS
TTCCTATTTGTTCAATGTGA+GGG 0.466799 5_1:-10555702 None:intergenic
GTTTAGCATCGGCGTCTTTG+AGG 0.470448 5_1:-10552663 None:intergenic
CAAAGACAACTTCTGCAGTT+GGG 0.475744 5_1:-10554780 None:intergenic
CTCCAGATAGCGGGCATCTA+CGG 0.476081 5_1:+10554519 Msa0716970:CDS
TGAGACAGCTGCATAAAGAT+TGG 0.476750 5_1:-10554752 None:intergenic
ACATTTCACCACAATCTCCT+TGG 0.477532 5_1:-10553583 None:intergenic
AAATTCTTTGATCATTGAAG+TGG 0.481456 5_1:-10555562 None:intergenic
GTTGAAGTCTAGTGGAGAAT+GGG 0.481563 5_1:+10553656 Msa0716970:CDS
TTACTCCCTAATTTCCTCCT+CGG 0.483032 5_1:-10553399 None:intergenic
GGCGGGAACTCATGTGGATC+AGG 0.484578 5_1:-10554824 None:intergenic
AGCCTACCATATATTGAGGC+TGG 0.484607 5_1:+10554566 Msa0716970:CDS
CACTCTTCTGAAAGAATTGG+AGG 0.486252 5_1:+10555015 Msa0716970:CDS
CCAACCACAACAACAGCAAG+AGG 0.489728 5_1:-10553615 None:intergenic
ATTTCCGGCGCAGTGTTGTT+GGG 0.490610 5_1:+10555407 Msa0716970:CDS
TCAAAGACAACTTCTGCAGT+TGG 0.493231 5_1:-10554781 None:intergenic
AGTTGAAGTCTAGTGGAGAA+TGG 0.495024 5_1:+10553655 Msa0716970:CDS
AGTCTAGTGGAGAATGGGCT+AGG 0.498080 5_1:+10553661 Msa0716970:CDS
GGAATGGAAAGTTGAGGAAA+AGG 0.498630 5_1:+10555036 Msa0716970:CDS
GAAAGCGACGTTACGAATCT+CGG 0.501899 5_1:-10552719 None:intergenic
TTTGCCTCTTGCTGTTGTTG+TGG 0.502334 5_1:+10553611 Msa0716970:CDS
TCTGTTCTTTCTACTATACA+AGG 0.502394 5_1:+10554674 Msa0716970:CDS
ACACTGAATTTAAGCTACTC+AGG 0.503315 5_1:+10554255 Msa0716970:CDS
CCACATACGAACACGTTCGT+TGG 0.503740 5_1:-10552692 None:intergenic
TTCTGAAAGAATTGGAGGAA+TGG 0.506890 5_1:+10555020 Msa0716970:CDS
TAGGTTAAGCAAATTTCCAA+TGG 0.508959 5_1:-10554393 None:intergenic
TGCTATAATACAGTGACATC+AGG 0.509798 5_1:+10555673 Msa0716970:three_prime_UTR
GTTGGATTGTTGTTTAGCAT+CGG 0.510642 5_1:-10552674 None:intergenic
ATGAAAATGGGTTTGGATGG+TGG 0.512724 5_1:-10552779 None:intergenic
TAGGATGCCGGAGGAGGAGT+TGG 0.514433 5_1:+10553278 Msa0716970:CDS
TTATTCACCAACTCCTCCTC+CGG 0.516987 5_1:-10553285 None:intergenic
CTCTACATTCTTGCCATGAA+CGG 0.517916 5_1:+10554099 Msa0716970:CDS
GTACCTCTGAGCAACATCTT+CGG 0.520035 5_1:-10553892 None:intergenic
GAATTGAGCTTCAGTGCTGA+AGG 0.520635 5_1:+10554965 Msa0716970:CDS
AGTTGGAACGGTGAGTTCGT+TGG 0.521287 5_1:+10553947 Msa0716970:CDS
CAACGAACGTGTTCGTATGT+GGG 0.522480 5_1:+10552693 Msa0716970:CDS
CCAACGAGAGATTGAGACAT+TGG 0.523975 5_1:+10552962 Msa0716970:CDS
AGGTACTTGAATGAGTTGAT+TGG 0.525860 5_1:+10553909 Msa0716970:CDS
GGTAGGTGTATGATTCAAGT+TGG 0.527033 5_1:+10553930 Msa0716970:CDS
GAGGTTGCTTTACATGCTGA+TGG 0.527264 5_1:+10553447 Msa0716970:CDS
CCGCTATCTGGAGAATCAAA+TGG 0.533645 5_1:-10554509 None:intergenic
ATTCCTATTTGTTCAATGTG+AGG 0.538517 5_1:-10555703 None:intergenic
CATTTGATTCTCCAGATAGC+GGG 0.540725 5_1:+10554510 Msa0716970:CDS
GTTATGAAAATGGGTTTGGA+TGG 0.542193 5_1:-10552782 None:intergenic
TGTTTGTTCAAAGAGAAGTT+CGG 0.543469 5_1:-10552560 None:intergenic
TTCGGTCACCAAAGGAAAAG+AGG 0.547444 5_1:+10554013 Msa0716970:CDS
CAATAGACTCCTTCTGTAGG+TGG 0.549473 5_1:-10554877 None:intergenic
CATCACGGTCATCAGAGTTA+GGG 0.549929 5_1:-10552930 None:intergenic
AAAGATTCCAGAAGGACTGA+AGG 0.550687 5_1:+10555108 Msa0716970:CDS
TCAGAGTTAGGGTTAGAACC+AGG 0.552647 5_1:-10552919 None:intergenic
TATGGATAGGATGCCGGAGG+AGG 0.554546 5_1:+10553272 Msa0716970:CDS
CCTCAAACCTTCGATGGCAG+AGG 0.554690 5_1:+10552507 None:intergenic
CTTGGCAAGATTCTCAAACT+CGG 0.557924 5_1:-10553565 None:intergenic
TCTAGAAAGTTGAAGTCTAG+TGG 0.559531 5_1:+10553648 Msa0716970:CDS
AGCAAATTTCCAATGGAAAG+CGG 0.561715 5_1:-10554386 None:intergenic
GGAGGATATGGATAGGATGC+CGG 0.566030 5_1:+10553266 Msa0716970:intron
ATAGTGATCCTCATCAGTTA+AGG 0.571894 5_1:+10553472 Msa0716970:CDS
TCTGATAGACGTGAAATGTA+TGG 0.573498 5_1:+10552880 Msa0716970:CDS
GTCTAGTGGAGAATGGGCTA+GGG 0.574911 5_1:+10553662 Msa0716970:CDS
TTCGACTTGGTCGCGAACTG+TGG 0.575642 5_1:-10552605 None:intergenic
ATTAGACTATGGGTCGCTGA+AGG 0.576200 5_1:+10553840 Msa0716970:CDS
GAAGATTACAAGCTGTACAA+TGG 0.578597 5_1:-10555480 None:intergenic
ACTATCACTTCAATCTGAAG+AGG 0.579893 5_1:+10554721 Msa0716970:CDS
CCAATGTCTCAATCTCTCGT+TGG 0.580447 5_1:-10552962 None:intergenic
TCTTCAGCATAATAAGGTGA+TGG 0.582209 5_1:-10552991 None:intergenic
AGTCTATGTTCAAAATCTAC+CGG 0.582883 5_1:-10555169 None:intergenic
AGATAGCGGGCATCTACGGT+TGG 0.586790 5_1:+10554523 Msa0716970:CDS
CAGAGTTAGGGTTAGAACCA+GGG 0.588544 5_1:-10552918 None:intergenic
TTAGTTTCAACAGATTCGGC+GGG 0.588815 5_1:-10554841 None:intergenic
TAGGAACTTACATCTGAGGA+AGG 0.589025 5_1:+10555433 Msa0716970:CDS
TTGCGAGGGAGGATATGGAT+AGG 0.589263 5_1:+10553259 Msa0716970:intron
TTGAGAAAGACTAATCTCGA+AGG 0.590028 5_1:+10554356 Msa0716970:CDS
GATGGTATCACACTCGCACC+AGG 0.590038 5_1:-10553543 None:intergenic
CGTTGGCACTGCTACCATCA+CGG 0.590235 5_1:-10552945 None:intergenic
AGAGAGCTTTCGGTCACCAA+AGG 0.592053 5_1:+10554005 Msa0716970:CDS
TAAACGGTTGCCATAGTCTG+TGG 0.594121 5_1:+10555625 Msa0716970:three_prime_UTR
GGGAGTTGCAGAATATTAGA+GGG 0.594453 5_1:+10553682 Msa0716970:CDS
CACTGAATTTAAGCTACTCA+GGG 0.597399 5_1:+10554256 Msa0716970:CDS
ATCACCCAACAACACTGCGC+CGG 0.601293 5_1:-10555411 None:intergenic
TAAAGAAAACACGATTTCAA+CGG 0.602457 5_1:-10553771 None:intergenic
TGACCAATCTTAGGCAATTG+GGG 0.602974 5_1:+10554621 Msa0716970:CDS
TCAAAGCCTACCATATATTG+AGG 0.604947 5_1:+10554562 Msa0716970:CDS
CGAGTTTGAGAATCTTGCCA+AGG 0.605334 5_1:+10553566 Msa0716970:CDS
TTGAGTACATGGTTATTGAT+CGG 0.605718 5_1:+10555071 Msa0716970:CDS
TGAGAAAGACTAATCTCGAA+GGG 0.606742 5_1:+10554357 Msa0716970:CDS
TGGCAATAGACTCCTTCTGT+AGG 0.606975 5_1:-10554880 None:intergenic
TAACTCTCATCATGATTCAA+CGG 0.607988 5_1:-10553495 None:intergenic
GCAAGATTCTCAAACTCGGA+TGG 0.608461 5_1:-10553561 None:intergenic
AGGTTGCTTTACATGCTGAT+GGG 0.609095 5_1:+10553448 Msa0716970:CDS
ATAACCATGTACTCAAGCAA+TGG 0.612082 5_1:-10555064 None:intergenic
AGATTCGGCGGGAACTCATG+TGG 0.612802 5_1:-10554830 None:intergenic
AATAGACTCCTTCTGTAGGT+GGG 0.614377 5_1:-10554876 None:intergenic
GAGATTGTGGTGAAATGTGA+AGG 0.616655 5_1:+10553588 Msa0716970:CDS
AATTGAGCTTCAGTGCTGAA+GGG 0.618208 5_1:+10554966 Msa0716970:CDS
GAATCTTGCCAAGGAGATTG+TGG 0.618959 5_1:+10553575 Msa0716970:CDS
ACATAATTCCCACCTACAGA+AGG 0.619310 5_1:+10554868 Msa0716970:CDS
GTGATAGTGACAGTGAATGA+AGG 0.619730 5_1:-10554706 None:intergenic
CTCAGGGTGTTAGAATTAGA+CGG 0.621154 5_1:+10554272 Msa0716970:CDS
TTCCAGCCTCAATATATGGT+AGG 0.622822 5_1:-10554568 None:intergenic
ATTGGAGGAATGGAAAGTTG+AGG 0.626866 5_1:+10555030 Msa0716970:CDS
GTGTATGATTCAAGTTGGAA+CGG 0.627291 5_1:+10553935 Msa0716970:CDS
GAGTTGCAGAATATTAGAGG+GGG 0.628712 5_1:+10553684 Msa0716970:CDS
GTTAGTTTCAACAGATTCGG+CGG 0.629832 5_1:-10554842 None:intergenic
AAGAATGTAGAGAATGCCGA+CGG 0.631410 5_1:-10554088 None:intergenic
AAGCTGAGAAAGATTCCAGA+AGG 0.631636 5_1:+10555100 Msa0716970:CDS
CTCAGCTAACTAAATCCCGT+CGG 0.633630 5_1:+10554072 Msa0716970:CDS
TAGCTTGCCAAGTACTATAG+GGG 0.634334 5_1:+10554307 Msa0716970:CDS
ACTTGAATGAGTTGATTGGT+AGG 0.638532 5_1:+10553913 Msa0716970:CDS
GCAGTTTCACCACCTTCTTG+AGG 0.644076 5_1:-10553870 None:intergenic
TGAAGAAGAGTATGTTGTTG+AGG 0.644555 5_1:+10553008 Msa0716970:CDS
GTGATAGGAACTTACATCTG+AGG 0.645377 5_1:+10555429 Msa0716970:CDS
CCATTTGATTCTCCAGATAG+CGG 0.646517 5_1:+10554509 Msa0716970:CDS
AATTTGTACGAGTATTAATG+CGG 0.654962 5_1:+10555648 Msa0716970:three_prime_UTR
AAAGCTCTCTAAGAAGATCG+TGG 0.655970 5_1:-10553992 None:intergenic
AGGAACTTACATCTGAGGAA+GGG 0.656933 5_1:+10555434 Msa0716970:CDS
AAACACGATTTCAACGGCGA+AGG 0.657801 5_1:-10553765 None:intergenic
TTCAACGGCCTTAACTGATG+AGG 0.658687 5_1:-10553480 None:intergenic
TTGGAACGGTGAGTTCGTTG+GGG 0.661524 5_1:+10553949 Msa0716970:CDS
GTTGTGCTTGATGATATTTG+GGG 0.669096 5_1:+10553342 Msa0716970:CDS
TTGTGCTTGATGATATTTGG+GGG 0.674043 5_1:+10553343 Msa0716970:CDS
GGATATGGATAGGATGCCGG+AGG 0.677024 5_1:+10553269 Msa0716970:intron
AGAATGTAGAGAATGCCGAC+GGG 0.678925 5_1:-10554087 None:intergenic
GCTGGAAACTGGATATCAGA+TGG 0.683300 5_1:+10554584 Msa0716970:CDS
CTGCCGAAGATGTTGCTCAG+AGG 0.683606 5_1:+10553889 Msa0716970:CDS
GGAGTTGCAGAATATTAGAG+GGG 0.683979 5_1:+10553683 Msa0716970:CDS
CCTAACTCTGATGACCGTGA+TGG 0.692199 5_1:+10552931 Msa0716970:CDS
GGAAACTGGATATCAGATGG+TGG 0.693002 5_1:+10554587 Msa0716970:CDS
GGCTATGTGAGAGATAGTTG+AGG 0.717852 5_1:-10552584 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATTGATTAGACTAT+GGG + chr5_1:10553830-10553849 Msa0716970:CDS 15.0%
!!! TTGTAATCTTCATTTTATTT+CGG + chr5_1:10555492-10555511 Msa0716970:CDS 15.0%
!!! TTTTTACTCCTTTTATTAAT+TGG + chr5_1:10555588-10555607 Msa0716970:CDS 15.0%
!!! TTTTACTCCTTTTATTAATT+GGG + chr5_1:10555589-10555608 Msa0716970:CDS 15.0%
!!! GAAGATTTTGTTATGAAAAT+GGG - chr5_1:10552794-10552813 None:intergenic 20.0%
!!! TGAAGATTTTGTTATGAAAA+TGG - chr5_1:10552795-10552814 None:intergenic 20.0%
!!! TTTTACCAATTCTTTCAATT+CGG - chr5_1:10552846-10552865 None:intergenic 20.0%
!!! AAATCGTGTTTTCTTTATTT+GGG + chr5_1:10553777-10553796 Msa0716970:CDS 20.0%
!! CAAAAAAATTGATTAGACTA+TGG + chr5_1:10553829-10553848 Msa0716970:CDS 20.0%
!! AGAAAATACCAAATGTAATT+TGG + chr5_1:10554450-10554469 Msa0716970:CDS 20.0%
!!! AAAACAAGCATTTTAAGTTT+TGG - chr5_1:10554920-10554939 None:intergenic 20.0%
!!! AAAACTTAAAATGCTTGTTT+TGG + chr5_1:10554919-10554938 Msa0716970:CDS 20.0%
!!! AAACTTAAAATGCTTGTTTT+GGG + chr5_1:10554920-10554939 Msa0716970:CDS 20.0%
!! TTGAAGAAACTAAAAATTAC+AGG + chr5_1:10555142-10555161 Msa0716970:CDS 20.0%
!!! TTTTGTTATGAAAATGGGTT+TGG - chr5_1:10552789-10552808 None:intergenic 25.0%
! CTAAGTTTATAGAGATGAAA+AGG - chr5_1:10552820-10552839 None:intergenic 25.0%
! TTTACCAATTCTTTCAATTC+GGG - chr5_1:10552845-10552864 None:intergenic 25.0%
!!! ATCATTTTGAGATTAAAGCT+TGG + chr5_1:10553169-10553188 Msa0716970:intron 25.0%
!!! TCATTTTGAGATTAAAGCTT+GGG + chr5_1:10553170-10553189 Msa0716970:intron 25.0%
!! GAATAAGCTTCATAATGTTT+TGG + chr5_1:10553302-10553321 Msa0716970:CDS 25.0%
! TAAAGAAAACACGATTTCAA+CGG - chr5_1:10553774-10553793 None:intergenic 25.0%
!! GAAATCGTGTTTTCTTTATT+TGG + chr5_1:10553776-10553795 Msa0716970:CDS 25.0%
!! TAGATTTTGAACATAGACTT+CGG + chr5_1:10555173-10555192 Msa0716970:CDS 25.0%
!! ACAACAGACATTTTATCAAT+TGG + chr5_1:10555241-10555260 Msa0716970:intron 25.0%
! AAATTCTTTGATCATTGAAG+TGG - chr5_1:10555565-10555584 None:intergenic 25.0%
! AGTCATTCCCAATTAATAAA+AGG - chr5_1:10555599-10555618 None:intergenic 25.0%
! AATTTGTACGAGTATTAATG+CGG + chr5_1:10555648-10555667 Msa0716970:three_prime_UTR 25.0%
TGTTTGTTCAAAGAGAAGTT+CGG - chr5_1:10552563-10552582 None:intergenic 30.0%
CTCTCAAAAACCAATTATCA+TGG + chr5_1:10552629-10552648 Msa0716970:CDS 30.0%
AACATTGCATCCATGATAAT+TGG - chr5_1:10552642-10552661 None:intergenic 30.0%
TACTCTTCTTCAGCATAATA+AGG - chr5_1:10553000-10553019 None:intergenic 30.0%
! GTTGAGGTAAAAGAAGATTT+TGG + chr5_1:10553024-10553043 Msa0716970:intron 30.0%
! TGGTTCAATTTTTACACAGT+TGG + chr5_1:10553044-10553063 Msa0716970:intron 30.0%
!! TTTTACACAGTTGGTTAGTT+TGG + chr5_1:10553053-10553072 Msa0716970:intron 30.0%
!! TTTACACAGTTGGTTAGTTT+GGG + chr5_1:10553054-10553073 Msa0716970:intron 30.0%
TGGTTTAGGAAAAACTACAT+TGG + chr5_1:10553113-10553132 Msa0716970:intron 30.0%
! TTTATGTTTCTGAGGAGTAT+AGG + chr5_1:10553193-10553212 Msa0716970:intron 30.0%
!! TAAGCTTCATAATGTTTTGG+CGG + chr5_1:10553305-10553324 Msa0716970:CDS 30.0%
TAACTCTCATCATGATTCAA+CGG - chr5_1:10553498-10553517 None:intergenic 30.0%
! AAAATACTCCTCTTTTCCTT+TGG - chr5_1:10554024-10554043 None:intergenic 30.0%
!!! AAAGGAAAAGAGGAGTATTT+TGG + chr5_1:10554023-10554042 Msa0716970:CDS 30.0%
TTAAGAAATCATACCGTTCA+TGG - chr5_1:10554115-10554134 None:intergenic 30.0%
! ACTGATTCAATTAAGGTATC+TGG + chr5_1:10554331-10554350 Msa0716970:CDS 30.0%
! CTGATTCAATTAAGGTATCT+GGG + chr5_1:10554332-10554351 Msa0716970:CDS 30.0%
TAGGTTAAGCAAATTTCCAA+TGG - chr5_1:10554396-10554415 None:intergenic 30.0%
ACCTACAAACACTTGATTTA+AGG + chr5_1:10554411-10554430 Msa0716970:CDS 30.0%
ACCTTAAATCAAGTGTTTGT+AGG - chr5_1:10554415-10554434 None:intergenic 30.0%
ACCAAATGTAATTTGGAAGT+TGG + chr5_1:10554457-10554476 Msa0716970:CDS 30.0%
ACCAACTTCCAAATTACATT+TGG - chr5_1:10554461-10554480 None:intergenic 30.0%
TAGCAAATATGACCAATCTT+AGG + chr5_1:10554612-10554631 Msa0716970:CDS 30.0%
!! AAATGGATTATCAGGACAAA+TGG + chr5_1:10554646-10554665 Msa0716970:CDS 30.0%
TCTGTTCTTTCTACTATACA+AGG + chr5_1:10554674-10554693 Msa0716970:CDS 30.0%
!! AAGGTTAGTTTCAACAGATT+CGG - chr5_1:10554848-10554867 None:intergenic 30.0%
!!! AATGCTTGTTTTGGGTAAAA+AGG + chr5_1:10554928-10554947 Msa0716970:CDS 30.0%
! TTTCACAATTGCATGTTTTG+CGG + chr5_1:10554990-10555009 Msa0716970:CDS 30.0%
TTGAGTACATGGTTATTGAT+CGG + chr5_1:10555071-10555090 Msa0716970:CDS 30.0%
AGTCTATGTTCAAAATCTAC+CGG - chr5_1:10555172-10555191 None:intergenic 30.0%
!! TCTGTTGTTGATTCGATAAT+TGG - chr5_1:10555229-10555248 None:intergenic 30.0%
TGTAAAAAATGCACTGTATG+CGG + chr5_1:10555331-10555350 Msa0716970:intron 30.0%
ATTGAAGTGGAAAAACTCAT+CGG - chr5_1:10555552-10555571 None:intergenic 30.0%
GGGAATGACTTCTAATTAAA+CGG + chr5_1:10555609-10555628 Msa0716970:exon 30.0%
TTCCTATTTGTTCAATGTGA+GGG - chr5_1:10555705-10555724 None:intergenic 30.0%
ATTCCTATTTGTTCAATGTG+AGG - chr5_1:10555706-10555725 None:intergenic 30.0%
!! GTTGGATTGTTGTTTAGCAT+CGG - chr5_1:10552677-10552696 None:intergenic 35.0%
! GTTATGAAAATGGGTTTGGA+TGG - chr5_1:10552785-10552804 None:intergenic 35.0%
AGTTCCCGAATTGAAAGAAT+TGG + chr5_1:10552838-10552857 Msa0716970:CDS 35.0%
TCTGATAGACGTGAAATGTA+TGG + chr5_1:10552880-10552899 Msa0716970:CDS 35.0%
TCTTCAGCATAATAAGGTGA+TGG - chr5_1:10552994-10553013 None:intergenic 35.0%
! TGAAGAAGAGTATGTTGTTG+AGG + chr5_1:10553008-10553027 Msa0716970:CDS 35.0%
!! AGACATGTTGTTTCGATTGT+TGG + chr5_1:10553084-10553103 Msa0716970:intron 35.0%
!! TGTTGTTTCGATTGTTGGTA+TGG + chr5_1:10553089-10553108 Msa0716970:intron 35.0%
! GTTGTTTCGATTGTTGGTAT+GGG + chr5_1:10553090-10553109 Msa0716970:intron 35.0%
!!! ATAATGTTTTGGCGGAGAAA+AGG + chr5_1:10553313-10553332 Msa0716970:CDS 35.0%
! TGGTTGTGCTTGATGATATT+TGG + chr5_1:10553340-10553359 Msa0716970:CDS 35.0%
! GGTTGTGCTTGATGATATTT+GGG + chr5_1:10553341-10553360 Msa0716970:CDS 35.0%
! GTTGTGCTTGATGATATTTG+GGG + chr5_1:10553342-10553361 Msa0716970:CDS 35.0%
! TTGTGCTTGATGATATTTGG+GGG + chr5_1:10553343-10553362 Msa0716970:CDS 35.0%
! TTAAATATGCTTTTCCGAGG+AGG + chr5_1:10553385-10553404 Msa0716970:CDS 35.0%
ATAGTGATCCTCATCAGTTA+AGG + chr5_1:10553472-10553491 Msa0716970:CDS 35.0%
ATGAGAGTTATGCGTTACTT+AGG + chr5_1:10553508-10553527 Msa0716970:CDS 35.0%
TCTAGAAAGTTGAAGTCTAG+TGG + chr5_1:10553648-10553667 Msa0716970:CDS 35.0%
! TTATTTGGGTCTTTTCCCAA+AGG + chr5_1:10553791-10553810 Msa0716970:CDS 35.0%
! TATTTGGGTCTTTTCCCAAA+GGG + chr5_1:10553792-10553811 Msa0716970:CDS 35.0%
TCTGAATGTTCATACCCTTT+GGG - chr5_1:10553809-10553828 None:intergenic 35.0%
!! AGGTACTTGAATGAGTTGAT+TGG + chr5_1:10553909-10553928 Msa0716970:CDS 35.0%
!! ACTTGAATGAGTTGATTGGT+AGG + chr5_1:10553913-10553932 Msa0716970:CDS 35.0%
!! GTGTATGATTCAAGTTGGAA+CGG + chr5_1:10553935-10553954 Msa0716970:CDS 35.0%
!!! AGAGGAGTATTTTGGTGATA+TGG + chr5_1:10554031-10554050 Msa0716970:CDS 35.0%
CAGATATAGACAAGAAAGTC+TGG + chr5_1:10554189-10554208 Msa0716970:CDS 35.0%
ACACTGAATTTAAGCTACTC+AGG + chr5_1:10554255-10554274 Msa0716970:CDS 35.0%
CACTGAATTTAAGCTACTCA+GGG + chr5_1:10554256-10554275 Msa0716970:CDS 35.0%
TGTTAGAATTAGACGGTGTT+CGG + chr5_1:10554279-10554298 Msa0716970:CDS 35.0%
!! TTAGCTTGCCAAGTACTATA+GGG + chr5_1:10554306-10554325 Msa0716970:CDS 35.0%
! TAGGGGAACTGATTCAATTA+AGG + chr5_1:10554324-10554343 Msa0716970:CDS 35.0%
TTGAGAAAGACTAATCTCGA+AGG + chr5_1:10554356-10554375 Msa0716970:CDS 35.0%
TGAGAAAGACTAATCTCGAA+GGG + chr5_1:10554357-10554376 Msa0716970:CDS 35.0%
AGCAAATTTCCAATGGAAAG+CGG - chr5_1:10554389-10554408 None:intergenic 35.0%
!! ATATGGTAGGCTTTGAAGAT+TGG - chr5_1:10554558-10554577 None:intergenic 35.0%
TCAAAGCCTACCATATATTG+AGG + chr5_1:10554562-10554581 Msa0716970:CDS 35.0%
TATGACCAATCTTAGGCAAT+TGG + chr5_1:10554619-10554638 Msa0716970:CDS 35.0%
ATGACCAATCTTAGGCAATT+GGG + chr5_1:10554620-10554639 Msa0716970:CDS 35.0%
!! TTGGGGATAAATGGATTATC+AGG + chr5_1:10554638-10554657 Msa0716970:CDS 35.0%
ACTATCACTTCAATCTGAAG+AGG + chr5_1:10554721-10554740 Msa0716970:CDS 35.0%
! TTTTGGCAATCTCTCAAGTT+TGG - chr5_1:10554903-10554922 None:intergenic 35.0%
TGGGTAAAAAGGCTTACAAT+TGG + chr5_1:10554939-10554958 Msa0716970:CDS 35.0%
GGGTAAAAAGGCTTACAATT+GGG + chr5_1:10554940-10554959 Msa0716970:CDS 35.0%
! TTCTGAAAGAATTGGAGGAA+TGG + chr5_1:10555020-10555039 Msa0716970:CDS 35.0%
ATAACCATGTACTCAAGCAA+TGG - chr5_1:10555067-10555086 None:intergenic 35.0%
ACTAAAAATTACAGGCATGC+CGG + chr5_1:10555150-10555169 Msa0716970:CDS 35.0%
GAAGATTACAAGCTGTACAA+TGG - chr5_1:10555483-10555502 None:intergenic 35.0%
TGCTATAATACAGTGACATC+AGG + chr5_1:10555673-10555692 Msa0716970:three_prime_UTR 35.0%
TTCCCTCACATTGAACAAAT+AGG + chr5_1:10555700-10555719 Msa0716970:three_prime_UTR 35.0%
!! GGTTTTTGAGAGATTCGACT+TGG - chr5_1:10552621-10552640 None:intergenic 40.0%
! ATGAAAATGGGTTTGGATGG+TGG - chr5_1:10552782-10552801 None:intergenic 40.0%
ATTGTTGGTATGGGTGGTTT+AGG + chr5_1:10553099-10553118 Msa0716970:intron 40.0%
! AGCTTGGGTTTATGTTTCTG+AGG + chr5_1:10553185-10553204 Msa0716970:intron 40.0%
! ATGTTTCTGAGGAGTATAGG+AGG + chr5_1:10553196-10553215 Msa0716970:intron 40.0%
! GTTTTGCAAGGGATTTTGAG+AGG + chr5_1:10553225-10553244 Msa0716970:intron 40.0%
!! TTTGGCGGAGAAAAGGTATT+TGG + chr5_1:10553320-10553339 Msa0716970:CDS 40.0%
! GGCTTAAATATGCTTTTCCG+AGG + chr5_1:10553382-10553401 Msa0716970:CDS 40.0%
! CTTTTCCGAGGAGGAAATTA+GGG + chr5_1:10553394-10553413 Msa0716970:CDS 40.0%
TTACTCCCTAATTTCCTCCT+CGG - chr5_1:10553402-10553421 None:intergenic 40.0%
! GTAAGATTTTGTTGACGACG+AGG + chr5_1:10553418-10553437 Msa0716970:CDS 40.0%
! TTTGTTGACGACGAGGATTT+TGG + chr5_1:10553425-10553444 Msa0716970:CDS 40.0%
! AGGTTGCTTTACATGCTGAT+GGG + chr5_1:10553448-10553467 Msa0716970:CDS 40.0%
! CTTAGGAGTAAAGCATTTCC+TGG + chr5_1:10553525-10553544 Msa0716970:CDS 40.0%
CTTGGCAAGATTCTCAAACT+CGG - chr5_1:10553568-10553587 None:intergenic 40.0%
ACATTTCACCACAATCTCCT+TGG - chr5_1:10553586-10553605 None:intergenic 40.0%
GAGATTGTGGTGAAATGTGA+AGG + chr5_1:10553588-10553607 Msa0716970:CDS 40.0%
AGTTGAAGTCTAGTGGAGAA+TGG + chr5_1:10553655-10553674 Msa0716970:CDS 40.0%
GTTGAAGTCTAGTGGAGAAT+GGG + chr5_1:10553656-10553675 Msa0716970:CDS 40.0%
AGGGAGTTGCAGAATATTAG+AGG + chr5_1:10553681-10553700 Msa0716970:CDS 40.0%
GGGAGTTGCAGAATATTAGA+GGG + chr5_1:10553682-10553701 Msa0716970:CDS 40.0%
GGAGTTGCAGAATATTAGAG+GGG + chr5_1:10553683-10553702 Msa0716970:CDS 40.0%
GAGTTGCAGAATATTAGAGG+GGG + chr5_1:10553684-10553703 Msa0716970:CDS 40.0%
GTCTGAATGTTCATACCCTT+TGG - chr5_1:10553810-10553829 None:intergenic 40.0%
!!! GAAGGTTTTTTGCCTCAAGA+AGG + chr5_1:10553858-10553877 Msa0716970:CDS 40.0%
GGTAGGTGTATGATTCAAGT+TGG + chr5_1:10553930-10553949 Msa0716970:CDS 40.0%
! AAAGCTCTCTAAGAAGATCG+TGG - chr5_1:10553995-10554014 None:intergenic 40.0%
CGATCTTCTTAGAGAGCTTT+CGG + chr5_1:10553995-10554014 Msa0716970:CDS 40.0%
!!! GAGTATTTTGGTGATATGGC+AGG + chr5_1:10554035-10554054 Msa0716970:CDS 40.0%
AAGAATGTAGAGAATGCCGA+CGG - chr5_1:10554091-10554110 None:intergenic 40.0%
CTCTACATTCTTGCCATGAA+CGG + chr5_1:10554099-10554118 Msa0716970:CDS 40.0%
! CTCAGGGTGTTAGAATTAGA+CGG + chr5_1:10554272-10554291 Msa0716970:CDS 40.0%
!! GTTAGCTTGCCAAGTACTAT+AGG + chr5_1:10554305-10554324 Msa0716970:CDS 40.0%
! TAGCTTGCCAAGTACTATAG+GGG + chr5_1:10554307-10554326 Msa0716970:CDS 40.0%
ATCAGTTCCCCTATAGTACT+TGG - chr5_1:10554317-10554336 None:intergenic 40.0%
CCATTTGATTCTCCAGATAG+CGG + chr5_1:10554509-10554528 Msa0716970:CDS 40.0%
CATTTGATTCTCCAGATAGC+GGG + chr5_1:10554510-10554529 Msa0716970:CDS 40.0%
TTCCAGCCTCAATATATGGT+AGG - chr5_1:10554571-10554590 None:intergenic 40.0%
CAGTTTCCAGCCTCAATATA+TGG - chr5_1:10554575-10554594 None:intergenic 40.0%
CATATATTGAGGCTGGAAAC+TGG + chr5_1:10554573-10554592 Msa0716970:CDS 40.0%
TGACCAATCTTAGGCAATTG+GGG + chr5_1:10554621-10554640 Msa0716970:CDS 40.0%
TATCCCCAATTGCCTAAGAT+TGG - chr5_1:10554627-10554646 None:intergenic 40.0%
CTTAGGCAATTGGGGATAAA+TGG + chr5_1:10554629-10554648 Msa0716970:CDS 40.0%
! GTGATAGTGACAGTGAATGA+AGG - chr5_1:10554709-10554728 None:intergenic 40.0%
TGAGACAGCTGCATAAAGAT+TGG - chr5_1:10554755-10554774 None:intergenic 40.0%
CAAAGACAACTTCTGCAGTT+GGG - chr5_1:10554783-10554802 None:intergenic 40.0%
TCAAAGACAACTTCTGCAGT+TGG - chr5_1:10554784-10554803 None:intergenic 40.0%
CTGCAGAAGTTGTCTTTGAA+TGG + chr5_1:10554785-10554804 Msa0716970:CDS 40.0%
TTAGTTTCAACAGATTCGGC+GGG - chr5_1:10554844-10554863 None:intergenic 40.0%
! GTTAGTTTCAACAGATTCGG+CGG - chr5_1:10554845-10554864 None:intergenic 40.0%
CTGTAGGTGGGAATTATGTA+AGG - chr5_1:10554867-10554886 None:intergenic 40.0%
ACATAATTCCCACCTACAGA+AGG + chr5_1:10554868-10554887 Msa0716970:CDS 40.0%
AATAGACTCCTTCTGTAGGT+GGG - chr5_1:10554879-10554898 None:intergenic 40.0%
! AATTGAGCTTCAGTGCTGAA+GGG + chr5_1:10554966-10554985 Msa0716970:CDS 40.0%
! GCTCACTCTTCTGAAAGAAT+TGG + chr5_1:10555012-10555031 Msa0716970:CDS 40.0%
! CACTCTTCTGAAAGAATTGG+AGG + chr5_1:10555015-10555034 Msa0716970:CDS 40.0%
ATTGGAGGAATGGAAAGTTG+AGG + chr5_1:10555030-10555049 Msa0716970:CDS 40.0%
GGAATGGAAAGTTGAGGAAA+AGG + chr5_1:10555036-10555055 Msa0716970:CDS 40.0%
AATGCCATTGCTTGAGTACA+TGG + chr5_1:10555060-10555079 Msa0716970:CDS 40.0%
AAGCTGAGAAAGATTCCAGA+AGG + chr5_1:10555100-10555119 Msa0716970:CDS 40.0%
AAAGATTCCAGAAGGACTGA+AGG + chr5_1:10555108-10555127 Msa0716970:CDS 40.0%
AAAAAATGCACTGTATGCGG+AGG + chr5_1:10555334-10555353 Msa0716970:intron 40.0%
! TCATGCTGCAGATTGATTTC+CGG + chr5_1:10555392-10555411 Msa0716970:intron 40.0%
GTGATAGGAACTTACATCTG+AGG + chr5_1:10555429-10555448 Msa0716970:CDS 40.0%
TAGGAACTTACATCTGAGGA+AGG + chr5_1:10555433-10555452 Msa0716970:CDS 40.0%
AGGAACTTACATCTGAGGAA+GGG + chr5_1:10555434-10555453 Msa0716970:CDS 40.0%
CGTACAAATTCCACAGACTA+TGG - chr5_1:10555638-10555657 None:intergenic 40.0%
GGCTATGTGAGAGATAGTTG+AGG - chr5_1:10552587-10552606 None:intergenic 45.0%
CAACGAACGTGTTCGTATGT+GGG + chr5_1:10552693-10552712 Msa0716970:CDS 45.0%
GAAAGCGACGTTACGAATCT+CGG - chr5_1:10552722-10552741 None:intergenic 45.0%
CAGAGTTAGGGTTAGAACCA+GGG - chr5_1:10552921-10552940 None:intergenic 45.0%
TCAGAGTTAGGGTTAGAACC+AGG - chr5_1:10552922-10552941 None:intergenic 45.0%
CATCACGGTCATCAGAGTTA+GGG - chr5_1:10552933-10552952 None:intergenic 45.0%
CCAATGTCTCAATCTCTCGT+TGG - chr5_1:10552965-10552984 None:intergenic 45.0%
CCAACGAGAGATTGAGACAT+TGG + chr5_1:10552962-10552981 Msa0716970:CDS 45.0%
GTTTCGATTGTTGGTATGGG+TGG + chr5_1:10553093-10553112 Msa0716970:intron 45.0%
! TTCTGAGGAGTATAGGAGGA+AGG + chr5_1:10553200-10553219 Msa0716970:intron 45.0%
! AGGAGGAAGGATGTTTTGCA+AGG + chr5_1:10553213-10553232 Msa0716970:intron 45.0%
! GGAGGAAGGATGTTTTGCAA+GGG + chr5_1:10553214-10553233 Msa0716970:intron 45.0%
!!! GGGATTTTGAGAGGTGTTGA+TGG + chr5_1:10553234-10553253 Msa0716970:intron 45.0%
TTATTCACCAACTCCTCCTC+CGG - chr5_1:10553288-10553307 None:intergenic 45.0%
! GCTTGATGATATTTGGGGGA+TGG + chr5_1:10553347-10553366 Msa0716970:CDS 45.0%
TGATGATATTTGGGGGATGG+AGG + chr5_1:10553350-10553369 Msa0716970:CDS 45.0%
ATATTTGGGGGATGGAGGTT+TGG + chr5_1:10553355-10553374 Msa0716970:CDS 45.0%
TATTTGGGGGATGGAGGTTT+GGG + chr5_1:10553356-10553375 Msa0716970:CDS 45.0%
! GCTTTTCCGAGGAGGAAATT+AGG + chr5_1:10553393-10553412 Msa0716970:CDS 45.0%
! GAGGTTGCTTTACATGCTGA+TGG + chr5_1:10553447-10553466 Msa0716970:CDS 45.0%
TTCAACGGCCTTAACTGATG+AGG - chr5_1:10553483-10553502 None:intergenic 45.0%
GCAAGATTCTCAAACTCGGA+TGG - chr5_1:10553564-10553583 None:intergenic 45.0%
CGAGTTTGAGAATCTTGCCA+AGG + chr5_1:10553566-10553585 Msa0716970:CDS 45.0%
GAATCTTGCCAAGGAGATTG+TGG + chr5_1:10553575-10553594 Msa0716970:CDS 45.0%
!! TTTGCCTCTTGCTGTTGTTG+TGG + chr5_1:10553611-10553630 Msa0716970:CDS 45.0%
AAACACGATTTCAACGGCGA+AGG - chr5_1:10553768-10553787 None:intergenic 45.0%
ATTAGACTATGGGTCGCTGA+AGG + chr5_1:10553840-10553859 Msa0716970:CDS 45.0%
!!! GGTTTTTTGCCTCAAGAAGG+TGG + chr5_1:10553861-10553880 Msa0716970:CDS 45.0%
GTACCTCTGAGCAACATCTT+CGG - chr5_1:10553895-10553914 None:intergenic 45.0%
TTCGGTCACCAAAGGAAAAG+AGG + chr5_1:10554013-10554032 Msa0716970:CDS 45.0%
CTCAGCTAACTAAATCCCGT+CGG + chr5_1:10554072-10554091 Msa0716970:CDS 45.0%
AGAATGTAGAGAATGCCGAC+GGG - chr5_1:10554090-10554109 None:intergenic 45.0%
CCGCTATCTGGAGAATCAAA+TGG - chr5_1:10554512-10554531 None:intergenic 45.0%
AGCCTACCATATATTGAGGC+TGG + chr5_1:10554566-10554585 Msa0716970:CDS 45.0%
GCTGGAAACTGGATATCAGA+TGG + chr5_1:10554584-10554603 Msa0716970:CDS 45.0%
GGAAACTGGATATCAGATGG+TGG + chr5_1:10554587-10554606 Msa0716970:CDS 45.0%
CAATAGACTCCTTCTGTAGG+TGG - chr5_1:10554880-10554899 None:intergenic 45.0%
TGGCAATAGACTCCTTCTGT+AGG - chr5_1:10554883-10554902 None:intergenic 45.0%
! GAATTGAGCTTCAGTGCTGA+AGG + chr5_1:10554965-10554984 Msa0716970:CDS 45.0%
GTGATATCCTTCAGTCCTTC+TGG - chr5_1:10555118-10555137 None:intergenic 45.0%
!! AGGGAAGCATCTTCAAGTTC+TGG + chr5_1:10555453-10555472 Msa0716970:CDS 45.0%
TAAACGGTTGCCATAGTCTG+TGG + chr5_1:10555625-10555644 Msa0716970:three_prime_UTR 45.0%
!! GTTTAGCATCGGCGTCTTTG+AGG - chr5_1:10552666-10552685 None:intergenic 50.0%
CCACATACGAACACGTTCGT+TGG - chr5_1:10552695-10552714 None:intergenic 50.0%
CCAACGAACGTGTTCGTATG+TGG + chr5_1:10552692-10552711 Msa0716970:CDS 50.0%
! GGTGTTGTCGTCAAAAACCC+TGG + chr5_1:10552901-10552920 Msa0716970:CDS 50.0%
CCATCACGGTCATCAGAGTT+AGG - chr5_1:10552934-10552953 None:intergenic 50.0%
CCTAACTCTGATGACCGTGA+TGG + chr5_1:10552931-10552950 Msa0716970:CDS 50.0%
!! AGGTGTTGATGGTGTTGCGA+GGG + chr5_1:10553245-10553264 Msa0716970:intron 50.0%
TTGCGAGGGAGGATATGGAT+AGG + chr5_1:10553259-10553278 Msa0716970:intron 50.0%
GGAGGATATGGATAGGATGC+CGG + chr5_1:10553266-10553285 Msa0716970:intron 50.0%
! GTTGACGACGAGGATTTTGG+AGG + chr5_1:10553428-10553447 Msa0716970:CDS 50.0%
CCAACCACAACAACAGCAAG+AGG - chr5_1:10553618-10553637 None:intergenic 50.0%
!! CCTCTTGCTGTTGTTGTGGT+TGG + chr5_1:10553615-10553634 Msa0716970:CDS 50.0%
!! CTTGCTGTTGTTGTGGTTGG+TGG + chr5_1:10553618-10553637 Msa0716970:CDS 50.0%
! AGTCTAGTGGAGAATGGGCT+AGG + chr5_1:10553661-10553680 Msa0716970:CDS 50.0%
!! GTCTAGTGGAGAATGGGCTA+GGG + chr5_1:10553662-10553681 Msa0716970:CDS 50.0%
GCAGTTTCACCACCTTCTTG+AGG - chr5_1:10553873-10553892 None:intergenic 50.0%
AGTTGGAACGGTGAGTTCGT+TGG + chr5_1:10553947-10553966 Msa0716970:CDS 50.0%
GTTGGAACGGTGAGTTCGTT+GGG + chr5_1:10553948-10553967 Msa0716970:CDS 50.0%
TTGGAACGGTGAGTTCGTTG+GGG + chr5_1:10553949-10553968 Msa0716970:CDS 50.0%
AGAGAGCTTTCGGTCACCAA+AGG + chr5_1:10554005-10554024 Msa0716970:CDS 50.0%
GGGAAACTTCCGCTTTCCAT+TGG + chr5_1:10554377-10554396 Msa0716970:CDS 50.0%
! ATTTCCGGCGCAGTGTTGTT+GGG + chr5_1:10555407-10555426 Msa0716970:CDS 50.0%
!! TTCGACTTGGTCGCGAACTG+TGG - chr5_1:10552608-10552627 None:intergenic 55.0%
CGTTGGCACTGCTACCATCA+CGG - chr5_1:10552948-10552967 None:intergenic 55.0%
!! GAGGTGTTGATGGTGTTGCG+AGG + chr5_1:10553244-10553263 Msa0716970:intron 55.0%
!! TGTTGATGGTGTTGCGAGGG+AGG + chr5_1:10553248-10553267 Msa0716970:intron 55.0%
!! TGGTGTTGCGAGGGAGGATA+TGG + chr5_1:10553254-10553273 Msa0716970:intron 55.0%
GGATATGGATAGGATGCCGG+AGG + chr5_1:10553269-10553288 Msa0716970:intron 55.0%
TATGGATAGGATGCCGGAGG+AGG + chr5_1:10553272-10553291 Msa0716970:CDS 55.0%
GATGGTATCACACTCGCACC+AGG - chr5_1:10553546-10553565 None:intergenic 55.0%
CTGCCGAAGATGTTGCTCAG+AGG + chr5_1:10553889-10553908 Msa0716970:CDS 55.0%
!! CTCCAGATAGCGGGCATCTA+CGG + chr5_1:10554519-10554538 Msa0716970:CDS 55.0%
AACCGTAGATGCCCGCTATC+TGG - chr5_1:10554524-10554543 None:intergenic 55.0%
!! AGATAGCGGGCATCTACGGT+TGG + chr5_1:10554523-10554542 Msa0716970:CDS 55.0%
AGATTCGGCGGGAACTCATG+TGG - chr5_1:10554833-10554852 None:intergenic 55.0%
GATTTCCGGCGCAGTGTTGT+TGG + chr5_1:10555406-10555425 Msa0716970:CDS 55.0%
ATCACCCAACAACACTGCGC+CGG - chr5_1:10555414-10555433 None:intergenic 55.0%
! GCGCAGTGTTGTTGGGTGAT+AGG + chr5_1:10555414-10555433 Msa0716970:CDS 55.0%
TAGGATGCCGGAGGAGGAGT+TGG + chr5_1:10553278-10553297 Msa0716970:CDS 60.0%
TGGGGGATGGAGGTTTGGGA+TGG + chr5_1:10553360-10553379 Msa0716970:CDS 60.0%
! GGGGGATGGAGGTTTGGGAT+GGG + chr5_1:10553361-10553380 Msa0716970:CDS 60.0%
GGCGGGAACTCATGTGGATC+AGG - chr5_1:10554827-10554846 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 10552520 10555769 10552520 ID=Msa0716970;Name=Msa0716970
chr5_1 mRNA 10552520 10555769 10552520 ID=Msa0716970-mRNA-1;Parent=Msa0716970;Name=Msa0716970-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0.33|1|0.5|0.33|3|153|888
chr5_1 exon 10552520 10553029 10552520 ID=Msa0716970-mRNA-1:exon:4265;Parent=Msa0716970-mRNA-1
chr5_1 exon 10553270 10555212 10553270 ID=Msa0716970-mRNA-1:exon:4266;Parent=Msa0716970-mRNA-1
chr5_1 exon 10555403 10555769 10555403 ID=Msa0716970-mRNA-1:exon:4267;Parent=Msa0716970-mRNA-1
chr5_1 CDS 10552520 10553029 10552520 ID=Msa0716970-mRNA-1:cds;Parent=Msa0716970-mRNA-1
chr5_1 CDS 10553270 10555212 10553270 ID=Msa0716970-mRNA-1:cds;Parent=Msa0716970-mRNA-1
chr5_1 CDS 10555403 10555616 10555403 ID=Msa0716970-mRNA-1:cds;Parent=Msa0716970-mRNA-1
chr5_1 three_prime_UTR 10555617 10555769 10555617 ID=Msa0716970-mRNA-1:three_prime_utr;Parent=Msa0716970-mRNA-1
Gene Sequence

>Msa0716970

ATGGCAGAGGTAGCAGTATCAACAGTAGTAACAAAACTAACCGAACTTCTCTTTGAACAAACAACCTCAACTATCTCTCACATAGCCACAGTTCGCGACCAAGTCGAATCTCTCAAAAACCAATTATCATGGATGCAATGTTTCCTCAAAGACGCCGATGCTAAACAACAATCCAACGAACGTGTTCGTATGTGGGTTTCCGAGATTCGTAACGTCGCTTTCGAAGCTGAAGAAATCATTGAAACTCATATCTATAATTCCACCATCCAAACCCATTTTCATAACAAAATCTTCACTCCTTTTCATCTCTATAAACTTAGTTCCCGAATTGAAAGAATTGGTAAAAAAATCAAAGACGTTTCTGATAGACGTGAAATGTATGGTGTTGTCGTCAAAAACCCTGGTTCTAACCCTAACTCTGATGACCGTGATGGTAGCAGTGCCAACGAGAGATTGAGACATTGGAGACAGCCATCACCTTATTATGCTGAAGAAGAGTATGTTGTTGAGGATATGGATAGGATGCCGGAGGAGGAGTTGGTGAATAAGCTTCATAATGTTTTGGCGGAGAAAAGGTATTTGGTTGTGCTTGATGATATTTGGGGGATGGAGGTTTGGGATGGGCTTAAATATGCTTTTCCGAGGAGGAAATTAGGGAGTAAGATTTTGTTGACGACGAGGATTTTGGAGGTTGCTTTACATGCTGATGGGAATAGTGATCCTCATCAGTTAAGGCCGTTGAATCATGATGAGAGTTATGCGTTACTTAGGAGTAAAGCATTTCCTGGTGCGAGTGTGATACCATCCGAGTTTGAGAATCTTGCCAAGGAGATTGTGGTGAAATGTGAAGGTTTGCCTCTTGCTGTTGTTGTGGTTGGTGGTTTGTTGTCTAGAAAGTTGAAGTCTAGTGGAGAATGGGCTAGGGAGTTGCAGAATATTAGAGGGGGTTTGCTTGAAGATCAAGAGAAGATAACAAGAATTTTAGCATTGAGCTATAATGAATTGCCTTCGCCGTTGAAATCGTGTTTTCTTTATTTGGGTCTTTTCCCAAAGGGTATGAACATTCAGACAAAAAAATTGATTAGACTATGGGTCGCTGAAGGTTTTTTGCCTCAAGAAGGTGGTGAAACTGCCGAAGATGTTGCTCAGAGGTACTTGAATGAGTTGATTGGTAGGTGTATGATTCAAGTTGGAACGGTGAGTTCGTTGGGGAGAGTTAAGACGATTCGAATCCACGATCTTCTTAGAGAGCTTTCGGTCACCAAAGGAAAAGAGGAGTATTTTGGTGATATGGCAGGCTCATCATCAACATCTCAGCTAACTAAATCCCGTCGGCATTCTCTACATTCTTGCCATGAACGGTATGATTTCTTAAAACATATTGCAGATTATTCGCGTTCATTGCTGTTCTTCAATAGAGAATATAACGCAGATATAGACAAGAAAGTCTGGATTCATTTGAGTTTTATGCAAGAAAAAAAATTGAATTTCATCTACACTGAATTTAAGCTACTCAGGGTGTTAGAATTAGACGGTGTTCGGTTAGTTAGCTTGCCAAGTACTATAGGGGAACTGATTCAATTAAGGTATCTGGGATTGAGAAAGACTAATCTCGAAGGGAAACTTCCGCTTTCCATTGGAAATTTGCTTAACCTACAAACACTTGATTTAAGGTATTGTTGTTTTCTTAAGAAAATACCAAATGTAATTTGGAAGTTGGTGAACTTGAGACATTTGCTTCTGTATACACCATTTGATTCTCCAGATAGCGGGCATCTACGGTTGGATACATTAACCAATCTTCAAAGCCTACCATATATTGAGGCTGGAAACTGGATATCAGATGGTGGTTTAGCAAATATGACCAATCTTAGGCAATTGGGGATAAATGGATTATCAGGACAAATGGTGAATTCTGTTCTTTCTACTATACAAGGATTACACAACCTTCATTCACTGTCACTATCACTTCAATCTGAAGAGGATGAATTTCCAATCTTTATGCAGCTGTCTCAGTGCACCCAACTGCAGAAGTTGTCTTTGAATGGAAAGATCAAGAAGCTACCTGATCCACATGAGTTCCCGCCGAATCTGTTGAAACTAACCTTACATAATTCCCACCTACAGAAGGAGTCTATTGCCAAACTTGAGAGATTGCCAAAACTTAAAATGCTTGTTTTGGGTAAAAAGGCTTACAATTGGGCAGAATTGAGCTTCAGTGCTGAAGGGTTTTCACAATTGCATGTTTTGCGGCTCACTCTTCTGAAAGAATTGGAGGAATGGAAAGTTGAGGAAAAGGCAATGCCATTGCTTGAGTACATGGTTATTGATCGGTGCGAGAAGCTGAGAAAGATTCCAGAAGGACTGAAGGATATCACTTCTTTGAAGAAACTAAAAATTACAGGCATGCCGGTAGATTTTGAACATAGACTTCGGACTAAAGATTTGCTTGAATTGATTTCCGGCGCAGTGTTGTTGGGTGATAGGAACTTACATCTGAGGAAGGGAAGCATCTTCAAGTTCTGGCATTCCATTGTACAGCTTGTAATCTTCATTTTATTTCGGCAATGTACACATTACTGTAGTGACTTGTCAAGCGCCGATGAGTTTTTCCACTTCAATGATCAAAGAATTTTATTTTTTACTCCTTTTATTAATTGGGAATGA

Protein sequence

>Msa0716970

MAEVAVSTVVTKLTELLFEQTTSTISHIATVRDQVESLKNQLSWMQCFLKDADAKQQSNERVRMWVSEIRNVAFEAEEIIETHIYNSTIQTHFHNKIFTPFHLYKLSSRIERIGKKIKDVSDRREMYGVVVKNPGSNPNSDDRDGSSANERLRHWRQPSPYYAEEEYVVEDMDRMPEEELVNKLHNVLAEKRYLVVLDDIWGMEVWDGLKYAFPRRKLGSKILLTTRILEVALHADGNSDPHQLRPLNHDESYALLRSKAFPGASVIPSEFENLAKEIVVKCEGLPLAVVVVGGLLSRKLKSSGEWARELQNIRGGLLEDQEKITRILALSYNELPSPLKSCFLYLGLFPKGMNIQTKKLIRLWVAEGFLPQEGGETAEDVAQRYLNELIGRCMIQVGTVSSLGRVKTIRIHDLLRELSVTKGKEEYFGDMAGSSSTSQLTKSRRHSLHSCHERYDFLKHIADYSRSLLFFNREYNADIDKKVWIHLSFMQEKKLNFIYTEFKLLRVLELDGVRLVSLPSTIGELIQLRYLGLRKTNLEGKLPLSIGNLLNLQTLDLRYCCFLKKIPNVIWKLVNLRHLLLYTPFDSPDSGHLRLDTLTNLQSLPYIEAGNWISDGGLANMTNLRQLGINGLSGQMVNSVLSTIQGLHNLHSLSLSLQSEEDEFPIFMQLSQCTQLQKLSLNGKIKKLPDPHEFPPNLLKLTLHNSHLQKESIAKLERLPKLKMLVLGKKAYNWAELSFSAEGFSQLHVLRLTLLKELEEWKVEEKAMPLLEYMVIDRCEKLRKIPEGLKDITSLKKLKITGMPVDFEHRLRTKDLLELISGAVLLGDRNLHLRKGSIFKFWHSIVQLVIFILFRQCTHYCSDLSSADEFFHFNDQRILFFTPFINWE*