Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0145740 | KAA8548026.1 | 59.313 | 902 | 288 | 12 | 3 | 854 | 8 | 880 | 0.0 | 1016 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0145740 | sp|Q9FLD5|ASD_ARATH | 60.089 | 451 | 165 | 4 | 408 | 844 | 11 | 460 | 0.0 | 553 |
Msa0145740 | sp|Q9FLD5|ASD_ARATH | 47.044 | 406 | 165 | 8 | 1 | 356 | 4 | 409 | 1.22e-117 | 370 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0145740 | A0A5J5BZE3 | 59.313 | 902 | 288 | 12 | 3 | 854 | 8 | 880 | 0.0 | 1016 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003630 | Msa0145740 | 0.975875 | 9.217695e-141 | -8.615850e-47 |
Msa0005270 | Msa0145740 | 0.826074 | 3.311429e-54 | -8.615850e-47 |
Msa0007850 | Msa0145740 | 0.806263 | 8.956173e-50 | -8.615850e-47 |
Msa0008200 | Msa0145740 | 0.802508 | 5.426431e-49 | -8.615850e-47 |
Msa0010490 | Msa0145740 | 0.817809 | 2.720121e-52 | -8.615850e-47 |
Msa0010500 | Msa0145740 | 0.807465 | 4.987203e-50 | -8.615850e-47 |
Msa0010770 | Msa0145740 | 0.806402 | 8.370133e-50 | -8.615850e-47 |
Msa0012710 | Msa0145740 | 0.802287 | 6.025339e-49 | -8.615850e-47 |
Msa0017320 | Msa0145740 | 0.824343 | 8.498942e-54 | -8.615850e-47 |
Msa0030300 | Msa0145740 | 0.817934 | 2.548612e-52 | -8.615850e-47 |
Msa0033880 | Msa0145740 | 0.818351 | 2.051638e-52 | -8.615850e-47 |
Msa0041690 | Msa0145740 | 0.816384 | 5.687356e-52 | -8.615850e-47 |
Msa0042550 | Msa0145740 | 0.820712 | 5.933995e-53 | -8.615850e-47 |
Msa0043500 | Msa0145740 | 0.811084 | 8.354584e-51 | -8.615850e-47 |
Msa0043650 | Msa0145740 | 0.811075 | 8.391665e-51 | -8.615850e-47 |
Msa0047250 | Msa0145740 | 0.803224 | 3.859708e-49 | -8.615850e-47 |
Msa0051750 | Msa0145740 | 0.802549 | 5.321325e-49 | -8.615850e-47 |
Msa0052860 | Msa0145740 | 0.808937 | 2.423137e-50 | -8.615850e-47 |
Msa0054820 | Msa0145740 | 0.812915 | 3.333027e-51 | -8.615850e-47 |
Msa0058310 | Msa0145740 | 0.955325 | 3.932750e-113 | -8.615850e-47 |
Msa0059890 | Msa0145740 | 0.844621 | 6.751414e-59 | -8.615850e-47 |
Msa0071250 | Msa0145740 | 0.812945 | 3.283296e-51 | -8.615850e-47 |
Msa0074750 | Msa0145740 | 0.802649 | 5.075678e-49 | -8.615850e-47 |
Msa0077900 | Msa0145740 | 0.806769 | 7.002749e-50 | -8.615850e-47 |
Msa0080830 | Msa0145740 | 0.820378 | 7.081045e-53 | -8.615850e-47 |
Msa0081650 | Msa0145740 | 0.831846 | 1.324040e-55 | -8.615850e-47 |
Msa0090550 | Msa0145740 | 0.823717 | 1.191704e-53 | -8.615850e-47 |
Msa0092410 | Msa0145740 | 0.810763 | 9.803375e-51 | -8.615850e-47 |
Msa0096580 | Msa0145740 | 0.816270 | 6.029650e-52 | -8.615850e-47 |
Msa0096700 | Msa0145740 | 0.803339 | 3.655353e-49 | -8.615850e-47 |
Msa0097950 | Msa0145740 | 0.816494 | 5.373050e-52 | -8.615850e-47 |
Msa0100160 | Msa0145740 | 0.802490 | 5.473983e-49 | -8.615850e-47 |
Msa0103250 | Msa0145740 | 0.832286 | 1.030697e-55 | -8.615850e-47 |
Msa0104800 | Msa0145740 | 0.815636 | 8.352419e-52 | -8.615850e-47 |
Msa0105520 | Msa0145740 | 0.804060 | 2.589913e-49 | -8.615850e-47 |
Msa0106620 | Msa0145740 | 0.805467 | 1.316206e-49 | -8.615850e-47 |
Msa0106710 | Msa0145740 | 0.811668 | 6.239821e-51 | -8.615850e-47 |
Msa0126360 | Msa0145740 | 0.809028 | 2.316666e-50 | -8.615850e-47 |
Msa0126880 | Msa0145740 | 0.807912 | 4.008472e-50 | -8.615850e-47 |
Msa0126910 | Msa0145740 | 0.803243 | 3.824826e-49 | -8.615850e-47 |
Msa0127850 | Msa0145740 | 0.825987 | 3.472949e-54 | -8.615850e-47 |
Msa0136120 | Msa0145740 | 0.834835 | 2.381700e-56 | -8.615850e-47 |
Msa0138020 | Msa0145740 | 0.831086 | 2.037855e-55 | -8.615850e-47 |
Msa0138640 | Msa0145740 | 0.961714 | 5.042467e-120 | -8.615850e-47 |
Msa0142500 | Msa0145740 | 0.834690 | 2.590758e-56 | -8.615850e-47 |
Msa0143850 | Msa0145740 | 0.800785 | 1.224774e-48 | -8.615850e-47 |
Msa0145150 | Msa0145740 | 0.803643 | 3.161208e-49 | -8.615850e-47 |
Msa0145740 | Msa0146080 | 0.819626 | 1.052212e-52 | -8.615850e-47 |
Msa0145740 | Msa0171980 | 0.825291 | 5.078156e-54 | -8.615850e-47 |
Msa0145740 | Msa0172000 | 0.800664 | 1.295902e-48 | -8.615850e-47 |
Msa0145740 | Msa0173390 | 0.803760 | 2.988888e-49 | -8.615850e-47 |
Msa0145740 | Msa0174000 | 0.812912 | 3.339429e-51 | -8.615850e-47 |
Msa0145740 | Msa0177210 | 0.811414 | 7.083965e-51 | -8.615850e-47 |
Msa0145740 | Msa0178510 | 0.817513 | 3.171772e-52 | -8.615850e-47 |
Msa0145740 | Msa0183870 | 0.804224 | 2.393553e-49 | -8.615850e-47 |
Msa0145740 | Msa0186950 | 0.800026 | 1.747714e-48 | -8.615850e-47 |
Msa0145740 | Msa0187490 | 0.821672 | 3.565854e-53 | -8.615850e-47 |
Msa0145740 | Msa0187830 | 0.803426 | 3.505954e-49 | -8.615850e-47 |
Msa0145740 | Msa0192640 | 0.805037 | 1.619446e-49 | -8.615850e-47 |
Msa0145740 | Msa0193540 | 0.823244 | 1.537800e-53 | -8.615850e-47 |
Msa0145740 | Msa0197610 | 0.811953 | 5.408540e-51 | -8.615850e-47 |
Msa0145740 | Msa0202090 | 0.823923 | 1.066314e-53 | -8.615850e-47 |
Msa0145740 | Msa0202930 | 0.818712 | 1.698370e-52 | -8.615850e-47 |
Msa0145740 | Msa0205010 | 0.807496 | 4.912707e-50 | -8.615850e-47 |
Msa0145740 | Msa0207030 | 0.817869 | 2.636637e-52 | -8.615850e-47 |
Msa0145740 | Msa0208000 | 0.801802 | 7.580221e-49 | -8.615850e-47 |
Msa0145740 | Msa0225640 | 0.802155 | 6.415451e-49 | -8.615850e-47 |
Msa0145740 | Msa0233370 | 0.830670 | 2.576314e-55 | -8.615850e-47 |
Msa0145740 | Msa0236070 | 0.815381 | 9.518528e-52 | -8.615850e-47 |
Msa0145740 | Msa0237200 | 0.808656 | 2.781884e-50 | -8.615850e-47 |
Msa0145740 | Msa0238030 | 0.805036 | 1.620783e-49 | -8.615850e-47 |
Msa0145740 | Msa0240270 | 0.812931 | 3.307113e-51 | -8.615850e-47 |
Msa0145740 | Msa0240300 | 0.827120 | 1.864795e-54 | -8.615850e-47 |
Msa0145740 | Msa0244930 | 0.818579 | 1.820932e-52 | -8.615850e-47 |
Msa0145740 | Msa0244970 | 0.807911 | 4.009716e-50 | -8.615850e-47 |
Msa0145740 | Msa0244980 | 0.834516 | 2.865713e-56 | -8.615850e-47 |
Msa0145740 | Msa0262370 | 0.827865 | 1.235177e-54 | -8.615850e-47 |
Msa0145740 | Msa0265600 | 0.806811 | 6.861640e-50 | -8.615850e-47 |
Msa0145740 | Msa0271790 | 0.802701 | 4.950376e-49 | -8.615850e-47 |
Msa0145740 | Msa0274630 | 0.816850 | 4.470568e-52 | -8.615850e-47 |
Msa0145740 | Msa0283420 | 0.828958 | 6.729574e-55 | -8.615850e-47 |
Msa0145740 | Msa0284450 | 0.822728 | 2.028556e-53 | -8.615850e-47 |
Msa0145740 | Msa0285330 | 0.829477 | 5.037242e-55 | -8.615850e-47 |
Msa0145740 | Msa0296980 | -0.825556 | 4.395166e-54 | -8.615850e-47 |
Msa0145740 | Msa0300150 | 0.819433 | 1.164305e-52 | -8.615850e-47 |
Msa0145740 | Msa0303460 | 0.810359 | 1.198824e-50 | -8.615850e-47 |
Msa0145740 | Msa0303520 | 0.809902 | 1.504010e-50 | -8.615850e-47 |
Msa0145740 | Msa0307310 | 0.804260 | 2.353164e-49 | -8.615850e-47 |
Msa0145740 | Msa0307960 | 0.805208 | 1.491583e-49 | -8.615850e-47 |
Msa0145740 | Msa0308440 | 0.811731 | 6.046736e-51 | -8.615850e-47 |
Msa0145740 | Msa0311720 | 0.822769 | 1.983574e-53 | -8.615850e-47 |
Msa0145740 | Msa0314060 | 0.814410 | 1.562562e-51 | -8.615850e-47 |
Msa0145740 | Msa0317960 | 0.802626 | 5.131016e-49 | -8.615850e-47 |
Msa0145740 | Msa0321690 | 0.830846 | 2.333299e-55 | -8.615850e-47 |
Msa0145740 | Msa0322680 | 0.815790 | 7.716824e-52 | -8.615850e-47 |
Msa0145740 | Msa0324240 | 0.835127 | 2.010970e-56 | -8.615850e-47 |
Msa0145740 | Msa0333970 | -0.808453 | 3.073610e-50 | -8.615850e-47 |
Msa0145740 | Msa0337590 | 0.806415 | 8.316215e-50 | -8.615850e-47 |
Msa0145740 | Msa0339910 | 0.818493 | 1.904513e-52 | -8.615850e-47 |
Msa0145740 | Msa0347750 | 0.800557 | 1.362938e-48 | -8.615850e-47 |
Msa0145740 | Msa0347950 | 0.800121 | 1.672128e-48 | -8.615850e-47 |
Msa0145740 | Msa0347990 | 0.806396 | 8.395930e-50 | -8.615850e-47 |
Msa0145740 | Msa0349700 | 0.814384 | 1.583257e-51 | -8.615850e-47 |
Msa0145740 | Msa0363060 | 0.800941 | 1.138184e-48 | -8.615850e-47 |
Msa0145740 | Msa0366210 | 0.821211 | 4.556128e-53 | -8.615850e-47 |
Msa0145740 | Msa0378970 | 0.827379 | 1.616105e-54 | -8.615850e-47 |
Msa0145740 | Msa0381000 | 0.800241 | 1.580881e-48 | -8.615850e-47 |
Msa0145740 | Msa0382310 | 0.803893 | 2.805403e-49 | -8.615850e-47 |
Msa0145740 | Msa0387050 | 0.815603 | 8.496914e-52 | -8.615850e-47 |
Msa0145740 | Msa0389910 | 0.834479 | 2.927304e-56 | -8.615850e-47 |
Msa0145740 | Msa0391400 | 0.810918 | 9.074562e-51 | -8.615850e-47 |
Msa0145740 | Msa0397820 | 0.803618 | 3.198411e-49 | -8.615850e-47 |
Msa0145740 | Msa0403490 | 0.815505 | 8.932722e-52 | -8.615850e-47 |
Msa0145740 | Msa0408300 | 0.825015 | 5.902461e-54 | -8.615850e-47 |
Msa0145740 | Msa0410300 | 0.813232 | 2.840918e-51 | -8.615850e-47 |
Msa0145740 | Msa0419720 | 0.813542 | 2.428834e-51 | -8.615850e-47 |
Msa0145740 | Msa0422180 | 0.816960 | 4.224205e-52 | -8.615850e-47 |
Msa0145740 | Msa0427580 | 0.817400 | 3.363747e-52 | -8.615850e-47 |
Msa0145740 | Msa0431210 | 0.809209 | 2.118638e-50 | -8.615850e-47 |
Msa0145740 | Msa0432500 | 0.821220 | 4.532796e-53 | -8.615850e-47 |
Msa0145740 | Msa0435220 | 0.819337 | 1.224697e-52 | -8.615850e-47 |
Msa0145740 | Msa0461590 | 0.816625 | 5.022237e-52 | -8.615850e-47 |
Msa0145740 | Msa0472770 | 0.807548 | 4.789501e-50 | -8.615850e-47 |
Msa0145740 | Msa0474700 | 0.814259 | 1.687249e-51 | -8.615850e-47 |
Msa0145740 | Msa0474940 | 0.810152 | 1.328382e-50 | -8.615850e-47 |
Msa0145740 | Msa0480780 | 0.815253 | 1.016469e-51 | -8.615850e-47 |
Msa0145740 | Msa0481030 | 0.815689 | 8.129149e-52 | -8.615850e-47 |
Msa0145740 | Msa0481280 | 0.827140 | 1.844456e-54 | -8.615850e-47 |
Msa0145740 | Msa0482180 | 0.811575 | 6.537815e-51 | -8.615850e-47 |
Msa0145740 | Msa0482940 | 0.819517 | 1.114253e-52 | -8.615850e-47 |
Msa0145740 | Msa0489660 | 0.815544 | 8.757694e-52 | -8.615850e-47 |
Msa0145740 | Msa0491000 | 0.800366 | 1.491006e-48 | -8.615850e-47 |
Msa0145740 | Msa0500470 | 0.804029 | 2.627446e-49 | -8.615850e-47 |
Msa0145740 | Msa0514610 | 0.835013 | 2.147912e-56 | -8.615850e-47 |
Msa0145740 | Msa0518170 | 0.825381 | 4.835123e-54 | -8.615850e-47 |
Msa0145740 | Msa0520270 | 0.803008 | 4.278273e-49 | -8.615850e-47 |
Msa0145740 | Msa0523050 | 0.843844 | 1.091227e-58 | -8.615850e-47 |
Msa0145740 | Msa0530290 | 0.800391 | 1.473384e-48 | -8.615850e-47 |
Msa0145740 | Msa0531250 | 0.810656 | 1.034051e-50 | -8.615850e-47 |
Msa0145740 | Msa0532980 | 0.811118 | 8.215664e-51 | -8.615850e-47 |
Msa0145740 | Msa0538800 | 0.810781 | 9.717899e-51 | -8.615850e-47 |
Msa0145740 | Msa0546570 | 0.813669 | 2.276739e-51 | -8.615850e-47 |
Msa0145740 | Msa0549780 | 0.806644 | 7.441653e-50 | -8.615850e-47 |
Msa0145740 | Msa0555640 | 0.806493 | 8.008707e-50 | -8.615850e-47 |
Msa0145740 | Msa0560500 | 0.808972 | 2.381416e-50 | -8.615850e-47 |
Msa0145740 | Msa0566350 | 0.820066 | 8.347223e-53 | -8.615850e-47 |
Msa0145740 | Msa0566750 | 0.820451 | 6.811085e-53 | -8.615850e-47 |
Msa0145740 | Msa0569780 | 0.849730 | 2.681235e-60 | -8.615850e-47 |
Msa0145740 | Msa0576680 | 0.801567 | 8.472957e-49 | -8.615850e-47 |
Msa0145740 | Msa0581280 | 0.806625 | 7.510671e-50 | -8.615850e-47 |
Msa0145740 | Msa0588090 | 0.826113 | 3.241261e-54 | -8.615850e-47 |
Msa0145740 | Msa0600080 | 0.814387 | 1.581535e-51 | -8.615850e-47 |
Msa0145740 | Msa0602370 | 0.816718 | 4.787196e-52 | -8.615850e-47 |
Msa0145740 | Msa0610180 | 0.811566 | 6.568120e-51 | -8.615850e-47 |
Msa0145740 | Msa0610250 | 0.804692 | 1.912142e-49 | -8.615850e-47 |
Msa0145740 | Msa0618950 | 0.816369 | 5.730239e-52 | -8.615850e-47 |
Msa0145740 | Msa0620330 | 0.802975 | 4.347236e-49 | -8.615850e-47 |
Msa0145740 | Msa0621600 | 0.816789 | 4.613349e-52 | -8.615850e-47 |
Msa0145740 | Msa0624060 | 0.803574 | 3.266291e-49 | -8.615850e-47 |
Msa0145740 | Msa0626940 | 0.811046 | 8.514654e-51 | -8.615850e-47 |
Msa0145740 | Msa0628420 | 0.806134 | 9.532797e-50 | -8.615850e-47 |
Msa0145740 | Msa0643320 | 0.834388 | 3.084803e-56 | -8.615850e-47 |
Msa0145740 | Msa0652690 | 0.810756 | 9.840588e-51 | -8.615850e-47 |
Msa0145740 | Msa0654620 | 0.822720 | 2.036842e-53 | -8.615850e-47 |
Msa0145740 | Msa0657120 | 0.802375 | 5.779859e-49 | -8.615850e-47 |
Msa0145740 | Msa0658680 | 0.818630 | 1.772893e-52 | -8.615850e-47 |
Msa0145740 | Msa0659790 | 0.830455 | 2.908559e-55 | -8.615850e-47 |
Msa0145740 | Msa0665080 | 0.800449 | 1.433629e-48 | -8.615850e-47 |
Msa0145740 | Msa0673270 | 0.846637 | 1.916257e-59 | -8.615850e-47 |
Msa0145740 | Msa0679550 | 0.811095 | 8.309264e-51 | -8.615850e-47 |
Msa0145740 | Msa0682090 | 0.800996 | 1.108701e-48 | -8.615850e-47 |
Msa0145740 | Msa0683140 | 0.829761 | 4.296530e-55 | -8.615850e-47 |
Msa0145740 | Msa0683600 | 0.822583 | 2.191841e-53 | -8.615850e-47 |
Msa0145740 | Msa0686080 | 0.803217 | 3.873727e-49 | -8.615850e-47 |
Msa0145740 | Msa0698440 | 0.821936 | 3.097405e-53 | -8.615850e-47 |
Msa0145740 | Msa0701100 | 0.821854 | 3.235572e-53 | -8.615850e-47 |
Msa0145740 | Msa0703440 | 0.816597 | 5.095879e-52 | -8.615850e-47 |
Msa0145740 | Msa0703910 | 0.824744 | 6.836692e-54 | -8.615850e-47 |
Msa0145740 | Msa0705390 | 0.812647 | 3.816669e-51 | -8.615850e-47 |
Msa0145740 | Msa0705990 | 0.847439 | 1.155526e-59 | -8.615850e-47 |
Msa0145740 | Msa0709160 | 0.831084 | 2.039892e-55 | -8.615850e-47 |
Msa0145740 | Msa0712560 | 0.840231 | 9.845953e-58 | -8.615850e-47 |
Msa0145740 | Msa0721280 | 0.808983 | 2.368017e-50 | -8.615850e-47 |
Msa0145740 | Msa0721340 | 0.825868 | 3.706834e-54 | -8.615850e-47 |
Msa0145740 | Msa0724370 | 0.822319 | 2.524075e-53 | -8.615850e-47 |
Msa0145740 | Msa0726080 | 0.826888 | 2.118639e-54 | -8.615850e-47 |
Msa0145740 | Msa0732600 | 0.812775 | 3.577755e-51 | -8.615850e-47 |
Msa0145740 | Msa0742150 | 0.830216 | 3.327458e-55 | -8.615850e-47 |
Msa0145740 | Msa0744100 | 0.802679 | 5.004344e-49 | -8.615850e-47 |
Msa0145740 | Msa0760350 | 0.808001 | 3.838379e-50 | -8.615850e-47 |
Msa0145740 | Msa0763920 | 0.807096 | 5.973481e-50 | -8.615850e-47 |
Msa0145740 | Msa0764920 | 0.824924 | 6.200460e-54 | -8.615850e-47 |
Msa0145740 | Msa0773590 | 0.812640 | 3.830563e-51 | -8.615850e-47 |
Msa0145740 | Msa0779260 | 0.830066 | 3.620905e-55 | -8.615850e-47 |
Msa0145740 | Msa0786070 | 0.820410 | 6.961797e-53 | -8.615850e-47 |
Msa0145740 | Msa0788120 | 0.804315 | 2.291051e-49 | -8.615850e-47 |
Msa0145740 | Msa0791090 | 0.803757 | 2.993443e-49 | -8.615850e-47 |
Msa0145740 | Msa0796440 | 0.806080 | 9.788003e-50 | -8.615850e-47 |
Msa0145740 | Msa0801730 | 0.810569 | 1.080123e-50 | -8.615850e-47 |
Msa0145740 | Msa0809140 | 0.829022 | 6.494844e-55 | -8.615850e-47 |
Msa0145740 | Msa0811040 | 0.826169 | 3.142957e-54 | -8.615850e-47 |
Msa0145740 | Msa0817120 | 0.805648 | 1.206361e-49 | -8.615850e-47 |
Msa0145740 | Msa0823440 | 0.810174 | 1.313994e-50 | -8.615850e-47 |
Msa0145740 | Msa0826150 | 0.826252 | 3.003919e-54 | -8.615850e-47 |
Msa0145740 | Msa0844110 | 0.815259 | 1.013178e-51 | -8.615850e-47 |
Msa0145740 | Msa0844610 | 0.823651 | 1.235072e-53 | -8.615850e-47 |
Msa0145740 | Msa0846230 | 0.827716 | 1.341802e-54 | -8.615850e-47 |
Msa0145740 | Msa0847470 | 0.826914 | 2.088553e-54 | -8.615850e-47 |
Msa0145740 | Msa0849440 | 0.809211 | 2.116275e-50 | -8.615850e-47 |
Msa0145740 | Msa0861470 | 0.818446 | 1.952357e-52 | -8.615850e-47 |
Msa0145740 | Msa0861570 | 0.822563 | 2.215775e-53 | -8.615850e-47 |
Msa0145740 | Msa0866400 | 0.831095 | 2.027056e-55 | -8.615850e-47 |
Msa0145740 | Msa0866410 | 0.807207 | 5.656477e-50 | -8.615850e-47 |
Msa0145740 | Msa0877710 | 0.803560 | 3.289112e-49 | -8.615850e-47 |
Msa0145740 | Msa0880040 | 0.824456 | 7.994876e-54 | -8.615850e-47 |
Msa0145740 | Msa0880810 | 0.816450 | 5.496259e-52 | -8.615850e-47 |
Msa0145740 | Msa0902830 | 0.803328 | 3.674187e-49 | -8.615850e-47 |
Msa0145740 | Msa0945240 | 0.815458 | 9.150321e-52 | -8.615850e-47 |
Msa0145740 | Msa0958030 | 0.811601 | 6.451268e-51 | -8.615850e-47 |
Msa0145740 | Msa0965020 | 0.817977 | 2.491785e-52 | -8.615850e-47 |
Msa0145740 | Msa0970530 | 0.824652 | 7.186966e-54 | -8.615850e-47 |
Msa0145740 | Msa0970600 | 0.813189 | 2.902586e-51 | -8.615850e-47 |
Msa0145740 | Msa0980020 | 0.819071 | 1.407671e-52 | -8.615850e-47 |
Msa0145740 | Msa0981430 | 0.815114 | 1.090917e-51 | -8.615850e-47 |
Msa0145740 | Msa0990580 | 0.804541 | 2.056273e-49 | -8.615850e-47 |
Msa0145740 | Msa0992580 | 0.830926 | 2.229596e-55 | -8.615850e-47 |
Msa0145740 | Msa0992600 | 0.831979 | 1.227972e-55 | -8.615850e-47 |
Msa0145740 | Msa0994370 | 0.814015 | 1.910628e-51 | -8.615850e-47 |
Msa0145740 | Msa1024680 | 0.820915 | 5.328018e-53 | -8.615850e-47 |
Msa0145740 | Msa1026640 | 0.814586 | 1.428873e-51 | -8.615850e-47 |
Msa0145740 | Msa1027250 | 0.802787 | 4.753067e-49 | -8.615850e-47 |
Msa0145740 | Msa1027300 | 0.809125 | 2.208628e-50 | -8.615850e-47 |
Msa0145740 | Msa1027360 | 0.805274 | 1.444913e-49 | -8.615850e-47 |
Msa0145740 | Msa1028760 | -0.813378 | 2.639009e-51 | -8.615850e-47 |
Msa0145740 | Msa1036740 | 0.818642 | 1.761978e-52 | -8.615850e-47 |
Msa0145740 | Msa1042660 | 0.808407 | 3.145261e-50 | -8.615850e-47 |
Msa0145740 | Msa1053200 | 0.807180 | 5.731852e-50 | -8.615850e-47 |
Msa0145740 | Msa1063420 | 0.859090 | 5.261530e-63 | -8.615850e-47 |
Msa0145740 | Msa1071320 | 0.821987 | 3.014755e-53 | -8.615850e-47 |
Msa0145740 | Msa1077070 | 0.814254 | 1.692152e-51 | -8.615850e-47 |
Msa0145740 | Msa1080490 | 0.821484 | 3.940997e-53 | -8.615850e-47 |
Msa0145740 | Msa1089320 | 0.825399 | 4.788576e-54 | -8.615850e-47 |
Msa0145740 | Msa1093100 | 0.806057 | 9.896827e-50 | -8.615850e-47 |
Msa0145740 | Msa1095620 | 0.807335 | 5.315341e-50 | -8.615850e-47 |
Msa0145740 | Msa1098890 | 0.800235 | 1.585260e-48 | -8.615850e-47 |
Msa0145740 | Msa1115280 | 0.813437 | 2.560291e-51 | -8.615850e-47 |
Msa0145740 | Msa1122780 | 0.813913 | 2.012308e-51 | -8.615850e-47 |
Msa0145740 | Msa1126240 | 0.833230 | 6.009019e-56 | -8.615850e-47 |
Msa0145740 | Msa1127430 | 0.806914 | 6.525067e-50 | -8.615850e-47 |
Msa0145740 | Msa1130530 | 0.840540 | 8.176229e-58 | -8.615850e-47 |
Msa0145740 | Msa1143020 | 0.817564 | 3.089138e-52 | -8.615850e-47 |
Msa0145740 | Msa1144040 | 0.825066 | 5.739831e-54 | -8.615850e-47 |
Msa0145740 | Msa1144970 | 0.812384 | 4.355628e-51 | -8.615850e-47 |
Msa0145740 | Msa1158230 | 0.804593 | 2.005195e-49 | -8.615850e-47 |
Msa0145740 | Msa1163870 | 0.831257 | 1.849110e-55 | -8.615850e-47 |
Msa0145740 | Msa1164020 | 0.821107 | 4.814120e-53 | -8.615850e-47 |
Msa0145740 | Msa1167010 | 0.822142 | 2.775305e-53 | -8.615850e-47 |
Msa0145740 | Msa1176270 | 0.804861 | 1.762730e-49 | -8.615850e-47 |
Msa0145740 | Msa1178060 | 0.812783 | 3.563339e-51 | -8.615850e-47 |
Msa0145740 | Msa1187590 | 0.802899 | 4.506120e-49 | -8.615850e-47 |
Msa0145740 | Msa1197070 | 0.804118 | 2.517829e-49 | -8.615850e-47 |
Msa0145740 | Msa1206650 | 0.815424 | 9.308888e-52 | -8.615850e-47 |
Msa0145740 | Msa1207310 | 0.829046 | 6.409073e-55 | -8.615850e-47 |
Msa0145740 | Msa1207350 | 0.807822 | 4.188385e-50 | -8.615850e-47 |
Msa0145740 | Msa1209190 | 0.814836 | 1.257974e-51 | -8.615850e-47 |
Msa0145740 | Msa1209860 | 0.802859 | 4.593902e-49 | -8.615850e-47 |
Msa0145740 | Msa1218580 | 0.814755 | 1.310467e-51 | -8.615850e-47 |
Msa0145740 | Msa1250110 | 0.841598 | 4.313109e-58 | -8.615850e-47 |
Msa0145740 | Msa1250730 | 0.839474 | 1.550401e-57 | -8.615850e-47 |
Msa0145740 | Msa1257070 | 0.810183 | 1.308512e-50 | -8.615850e-47 |
Msa0145740 | Msa1258370 | 0.802265 | 6.088714e-49 | -8.615850e-47 |
Msa0145740 | Msa1270660 | 0.878834 | 2.036957e-69 | -8.615850e-47 |
Msa0145740 | Msa1270730 | 0.831387 | 1.718023e-55 | -8.615850e-47 |
Msa0145740 | Msa1295330 | 0.802333 | 5.896044e-49 | -8.615850e-47 |
Msa0145740 | Msa1295930 | 0.803318 | 3.690885e-49 | -8.615850e-47 |
Msa0145740 | Msa1307180 | 0.866707 | 2.341938e-65 | -8.615850e-47 |
Msa0145740 | Msa1315750 | 0.811780 | 5.900650e-51 | -8.615850e-47 |
Msa0145740 | Msa1316360 | 0.862315 | 5.527817e-64 | -8.615850e-47 |
Msa0145740 | Msa1320820 | 0.818404 | 1.994782e-52 | -8.615850e-47 |
Msa0145740 | Msa1331350 | 0.820222 | 7.688302e-53 | -8.615850e-47 |
Msa0145740 | Msa1332050 | 0.835078 | 2.068852e-56 | -8.615850e-47 |
Msa0145740 | Msa1335230 | 0.819657 | 1.035378e-52 | -8.615850e-47 |
Msa0145740 | Msa1336040 | 0.812223 | 4.722825e-51 | -8.615850e-47 |
Msa0145740 | Msa1336560 | 0.801714 | 7.904422e-49 | -8.615850e-47 |
Msa0145740 | Msa1339190 | 0.810683 | 1.020428e-50 | -8.615850e-47 |
Msa0145740 | Msa1341490 | 0.841397 | 4.870773e-58 | -8.615850e-47 |
Msa0145740 | Msa1343250 | 0.800649 | 1.305491e-48 | -8.615850e-47 |
Msa0145740 | Msa1344310 | 0.820184 | 7.844112e-53 | -8.615850e-47 |
Msa0145740 | Msa1349520 | 0.833297 | 5.781808e-56 | -8.615850e-47 |
Msa0145740 | Msa1357080 | 0.827484 | 1.525388e-54 | -8.615850e-47 |
Msa0145740 | Msa1357890 | 0.810430 | 1.157205e-50 | -8.615850e-47 |
Msa0145740 | Msa1359560 | 0.811047 | 8.509270e-51 | -8.615850e-47 |
Msa0145740 | Msa1364210 | 0.825320 | 4.998134e-54 | -8.615850e-47 |
Msa0145740 | Msa1370590 | 0.821640 | 3.626526e-53 | -8.615850e-47 |
Msa0145740 | Msa1371240 | 0.826228 | 3.043833e-54 | -8.615850e-47 |
Msa0145740 | Msa1372150 | 0.815310 | 9.869439e-52 | -8.615850e-47 |
Msa0145740 | Msa1372290 | 0.810649 | 1.037647e-50 | -8.615850e-47 |
Msa0145740 | Msa1378410 | 0.803323 | 3.681970e-49 | -8.615850e-47 |
Msa0145740 | Msa1382020 | 0.819249 | 1.282701e-52 | -8.615850e-47 |
Msa0145740 | Msa1383740 | 0.841102 | 5.824852e-58 | -8.615850e-47 |
Msa0145740 | Msa1384100 | 0.819601 | 1.066328e-52 | -8.615850e-47 |
Msa0145740 | Msa1398090 | 0.803954 | 2.723596e-49 | -8.615850e-47 |
Msa0145740 | Msa1407190 | 0.822625 | 2.142986e-53 | -8.615850e-47 |
Msa0145740 | Msa1410420 | 0.807514 | 4.869591e-50 | -8.615850e-47 |
Msa0145740 | Msa1411950 | 0.802824 | 4.669295e-49 | -8.615850e-47 |
Msa0145740 | Msa1413380 | 0.817134 | 3.859924e-52 | -8.615850e-47 |
Msa0145740 | Msa1416260 | 0.812809 | 3.516952e-51 | -8.615850e-47 |
Msa0145740 | Msa1416370 | 0.813830 | 2.098520e-51 | -8.615850e-47 |
Msa0145740 | Msa1418920 | 0.822256 | 2.611111e-53 | -8.615850e-47 |
Msa0145740 | Msa1423820 | 0.817713 | 2.859152e-52 | -8.615850e-47 |
Msa0145740 | Msa1426570 | 0.832468 | 9.291965e-56 | -8.615850e-47 |
Msa0145740 | Msa1428780 | 0.823148 | 1.619036e-53 | -8.615850e-47 |
Msa0145740 | Msa1430130 | 0.807526 | 4.843063e-50 | -8.615850e-47 |
Msa0145740 | Msa1432130 | 0.824115 | 9.612143e-54 | -8.615850e-47 |
Msa0145740 | Msa1436600 | 0.813190 | 2.902211e-51 | -8.615850e-47 |
Msa0145740 | Msa1437330 | 0.818334 | 2.069347e-52 | -8.615850e-47 |
Msa0145740 | Msa1442790 | 0.835422 | 1.693633e-56 | -8.615850e-47 |
Msa0145740 | Msa1444120 | 0.820042 | 8.453866e-53 | -8.615850e-47 |
Msa0145740 | Msa1444260 | 0.806483 | 8.046772e-50 | -8.615850e-47 |
Msa0145740 | Msa1450720 | 0.814548 | 1.456837e-51 | -8.615850e-47 |
Msa0145740 | Msa1451150 | 0.803792 | 2.943066e-49 | -8.615850e-47 |
Msa0145740 | Msa1454530 | 0.801531 | 8.615371e-49 | -8.615850e-47 |
Msa0145740 | Msa1458810 | 0.810790 | 9.674220e-51 | -8.615850e-47 |
Msa0145740 | Msa1460750 | 0.807695 | 4.457539e-50 | -8.615850e-47 |
Msa0145740 | Msa1462470 | 0.826804 | 2.218442e-54 | -8.615850e-47 |
Msa0145740 | Msa1463600 | 0.850812 | 1.332676e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0145740 | MtrunA17_Chr1g0155131 | 95.754 | 471 | 15 | 2 | 396 | 865 | 2 | 468 | 0.0 | 923 |
Msa0145740 | MtrunA17_Chr1g0155131 | 50.433 | 462 | 164 | 10 | 3 | 399 | 5 | 466 | 2.35e-144 | 435 |
Msa0145740 | MtrunA17_Chr2g0292561 | 86.229 | 472 | 57 | 2 | 392 | 863 | 1 | 464 | 0.0 | 823 |
Msa0145740 | MtrunA17_Chr2g0292561 | 51.092 | 458 | 164 | 8 | 3 | 400 | 8 | 465 | 3.66e-152 | 455 |
Msa0145740 | MtrunA17_Chr1g0155121 | 82.510 | 486 | 8 | 6 | 1 | 409 | 1 | 486 | 0.0 | 788 |
Msa0145740 | MtrunA17_Chr1g0155121 | 56.923 | 455 | 177 | 4 | 409 | 847 | 9 | 460 | 3.69e-174 | 513 |
Msa0145740 | MtrunA17_Chr4g0059811 | 62.687 | 469 | 155 | 4 | 409 | 858 | 14 | 481 | 0.0 | 591 |
Msa0145740 | MtrunA17_Chr4g0059811 | 49.552 | 446 | 156 | 8 | 1 | 386 | 6 | 442 | 6.43e-143 | 433 |
Msa0145740 | MtrunA17_Chr7g0215951 | 63.736 | 455 | 147 | 6 | 409 | 848 | 9 | 460 | 0.0 | 582 |
Msa0145740 | MtrunA17_Chr7g0215951 | 45.652 | 460 | 172 | 9 | 1 | 383 | 1 | 459 | 3.85e-128 | 394 |
Msa0145740 | MtrunA17_Chr6g0452391 | 57.080 | 452 | 181 | 4 | 409 | 849 | 11 | 460 | 0.0 | 538 |
Msa0145740 | MtrunA17_Chr6g0452391 | 47.797 | 454 | 164 | 11 | 3 | 383 | 5 | 458 | 1.43e-132 | 406 |
Msa0145740 | MtrunA17_Chr6g0452371 | 59.292 | 452 | 171 | 4 | 409 | 849 | 13 | 462 | 0.0 | 538 |
Msa0145740 | MtrunA17_Chr6g0452371 | 44.286 | 490 | 187 | 12 | 3 | 406 | 7 | 496 | 2.35e-124 | 385 |
Msa0145740 | MtrunA17_Chr6g0452451 | 57.768 | 457 | 174 | 6 | 409 | 847 | 13 | 468 | 1.37e-180 | 530 |
Msa0145740 | MtrunA17_Chr6g0452451 | 45.022 | 462 | 173 | 10 | 3 | 383 | 7 | 468 | 1.98e-119 | 372 |
Msa0145740 | MtrunA17_Chr6g0452401 | 57.238 | 449 | 172 | 6 | 421 | 849 | 1 | 449 | 4.03e-176 | 517 |
Msa0145740 | MtrunA17_Chr6g0452401 | 46.205 | 448 | 155 | 12 | 21 | 383 | 1 | 447 | 1.10e-118 | 369 |
Msa0145740 | MtrunA17_Chr6g0466811 | 54.444 | 450 | 173 | 6 | 410 | 848 | 23 | 451 | 9.74e-165 | 488 |
Msa0145740 | MtrunA17_Chr6g0466811 | 43.379 | 438 | 180 | 11 | 7 | 383 | 20 | 450 | 2.55e-108 | 342 |
Msa0145740 | MtrunA17_Chr6g0452411 | 60.218 | 367 | 129 | 5 | 500 | 849 | 1 | 367 | 1.52e-148 | 444 |
Msa0145740 | MtrunA17_Chr6g0452411 | 48.907 | 366 | 108 | 9 | 96 | 383 | 1 | 365 | 1.46e-100 | 319 |
Msa0145740 | MtrunA17_Chr5g0404651 | 42.424 | 462 | 227 | 7 | 409 | 856 | 18 | 454 | 2.00e-116 | 363 |
Msa0145740 | MtrunA17_Chr5g0404651 | 35.294 | 476 | 233 | 11 | 4 | 410 | 13 | 482 | 5.76e-85 | 280 |
Msa0145740 | MtrunA17_Chr4g0072491 | 45.205 | 438 | 217 | 6 | 409 | 828 | 9 | 441 | 1.83e-115 | 362 |
Msa0145740 | MtrunA17_Chr4g0072491 | 35.639 | 477 | 237 | 12 | 1 | 412 | 1 | 472 | 1.98e-81 | 271 |
Msa0145740 | MtrunA17_Chr2g0315911 | 43.107 | 457 | 220 | 10 | 410 | 854 | 16 | 444 | 4.01e-108 | 340 |
Msa0145740 | MtrunA17_Chr2g0315911 | 36.087 | 460 | 232 | 13 | 1 | 407 | 7 | 457 | 1.13e-79 | 265 |
Msa0145740 | MtrunA17_Chr2g0315921 | 41.978 | 455 | 224 | 8 | 410 | 851 | 14 | 441 | 5.78e-108 | 339 |
Msa0145740 | MtrunA17_Chr2g0315921 | 36.996 | 446 | 213 | 12 | 1 | 387 | 5 | 441 | 3.96e-81 | 268 |
Msa0145740 | MtrunA17_Chr2g0315991 | 43.202 | 456 | 215 | 11 | 410 | 854 | 15 | 437 | 4.45e-107 | 338 |
Msa0145740 | MtrunA17_Chr2g0315991 | 36.765 | 476 | 216 | 15 | 1 | 407 | 7 | 466 | 4.10e-78 | 261 |
Msa0145740 | MtrunA17_Chr2g0308991 | 41.480 | 446 | 240 | 8 | 414 | 848 | 9 | 444 | 8.29e-107 | 339 |
Msa0145740 | MtrunA17_Chr2g0308991 | 36.098 | 410 | 206 | 9 | 8 | 367 | 3 | 406 | 2.69e-77 | 260 |
Msa0145740 | MtrunA17_Chr2g0315971 | 43.612 | 454 | 218 | 8 | 410 | 853 | 9 | 434 | 2.90e-105 | 341 |
Msa0145740 | MtrunA17_Chr2g0315971 | 51.449 | 276 | 110 | 4 | 576 | 849 | 451 | 704 | 1.32e-79 | 272 |
Msa0145740 | MtrunA17_Chr2g0315971 | 38.404 | 401 | 202 | 12 | 1 | 367 | 1 | 390 | 2.90e-74 | 258 |
Msa0145740 | MtrunA17_Chr2g0315971 | 48.058 | 206 | 91 | 3 | 173 | 367 | 467 | 667 | 2.70e-57 | 209 |
Msa0145740 | MtrunA17_Chr2g0316041 | 45.250 | 400 | 186 | 7 | 461 | 851 | 1 | 376 | 9.45e-104 | 328 |
Msa0145740 | MtrunA17_Chr2g0316041 | 39.348 | 399 | 190 | 10 | 59 | 408 | 1 | 396 | 1.05e-77 | 259 |
Msa0145740 | MtrunA17_Chr2g0315981 | 40.512 | 469 | 238 | 9 | 410 | 864 | 9 | 450 | 1.13e-102 | 326 |
Msa0145740 | MtrunA17_Chr2g0315981 | 34.388 | 474 | 233 | 15 | 1 | 411 | 1 | 459 | 9.10e-72 | 243 |
Msa0145740 | MtrunA17_Chr6g0452361 | 63.855 | 249 | 71 | 2 | 601 | 848 | 1 | 231 | 5.43e-102 | 317 |
Msa0145740 | MtrunA17_Chr6g0452361 | 52.985 | 268 | 79 | 5 | 184 | 406 | 1 | 266 | 1.90e-77 | 252 |
Msa0145740 | MtrunA17_Chr8g0372701 | 39.556 | 450 | 228 | 8 | 409 | 843 | 28 | 448 | 5.89e-101 | 323 |
Msa0145740 | MtrunA17_Chr8g0372701 | 36.409 | 401 | 196 | 11 | 9 | 364 | 28 | 414 | 1.69e-71 | 244 |
Msa0145740 | MtrunA17_Chr6g0452481 | 57.993 | 269 | 95 | 3 | 583 | 850 | 5 | 256 | 1.94e-99 | 312 |
Msa0145740 | MtrunA17_Chr6g0452481 | 47.719 | 285 | 103 | 7 | 166 | 406 | 5 | 287 | 6.45e-73 | 242 |
Msa0145740 | MtrunA17_Chr5g0404661 | 38.731 | 457 | 252 | 9 | 415 | 855 | 36 | 480 | 6.07e-93 | 301 |
Msa0145740 | MtrunA17_Chr5g0404661 | 36.473 | 414 | 192 | 15 | 40 | 388 | 50 | 457 | 5.68e-67 | 231 |
Msa0145740 | MtrunA17_Chr2g0316021 | 39.690 | 451 | 201 | 11 | 410 | 851 | 9 | 397 | 3.26e-91 | 295 |
Msa0145740 | MtrunA17_Chr2g0316021 | 37.912 | 364 | 183 | 13 | 1 | 330 | 1 | 355 | 1.96e-65 | 225 |
Msa0145740 | MtrunA17_Chr3g0134831 | 45.578 | 294 | 148 | 4 | 557 | 848 | 4 | 287 | 1.64e-79 | 259 |
Msa0145740 | MtrunA17_Chr3g0134831 | 41.107 | 253 | 125 | 5 | 166 | 394 | 29 | 281 | 8.29e-59 | 202 |
Msa0145740 | MtrunA17_Chr7g0276031 | 33.333 | 408 | 217 | 10 | 459 | 860 | 59 | 417 | 3.22e-63 | 220 |
Msa0145740 | MtrunA17_Chr7g0276031 | 32.258 | 341 | 177 | 7 | 55 | 369 | 57 | 369 | 5.25e-48 | 177 |
Msa0145740 | MtrunA17_Chr8g0346371 | 31.858 | 452 | 250 | 11 | 425 | 861 | 24 | 432 | 3.17e-61 | 215 |
Msa0145740 | MtrunA17_Chr8g0346371 | 33.333 | 309 | 152 | 8 | 89 | 367 | 92 | 376 | 1.50e-43 | 165 |
Msa0145740 | MtrunA17_Chr3g0127381 | 32.419 | 401 | 217 | 8 | 464 | 855 | 66 | 421 | 1.64e-60 | 213 |
Msa0145740 | MtrunA17_Chr3g0127381 | 32.440 | 336 | 175 | 7 | 60 | 367 | 64 | 375 | 2.91e-45 | 170 |
Msa0145740 | MtrunA17_Chr1g0148871 | 61.983 | 121 | 46 | 0 | 727 | 847 | 13 | 133 | 1.14e-42 | 153 |
Msa0145740 | MtrunA17_Chr1g0148871 | 49.419 | 172 | 58 | 3 | 274 | 416 | 2 | 173 | 9.39e-40 | 145 |
Msa0145740 | MtrunA17_Chr5g0404671 | 55.556 | 108 | 43 | 2 | 743 | 848 | 1 | 105 | 8.19e-32 | 122 |
Msa0145740 | MtrunA17_Chr5g0404671 | 52.113 | 71 | 32 | 1 | 301 | 369 | 1 | 71 | 5.42e-18 | 82.4 |
Msa0145740 | MtrunA17_Chr6g0452351 | 47.788 | 113 | 57 | 2 | 410 | 520 | 23 | 135 | 1.04e-30 | 117 |
Msa0145740 | MtrunA17_Chr6g0452351 | 30.172 | 116 | 70 | 5 | 3 | 111 | 20 | 131 | 4.72e-12 | 64.7 |
Msa0145740 | MtrunA17_Chr5g0404681 | 44.545 | 110 | 60 | 1 | 543 | 652 | 41 | 149 | 4.96e-28 | 110 |
Msa0145740 | MtrunA17_Chr5g0404681 | 47.170 | 106 | 47 | 2 | 134 | 230 | 39 | 144 | 1.20e-25 | 103 |
Msa0145740 | MtrunA17_Chr5g0404691 | 36.842 | 171 | 78 | 3 | 680 | 848 | 7 | 149 | 1.51e-22 | 95.1 |
Msa0145740 | MtrunA17_Chr5g0404691 | 35.135 | 148 | 76 | 7 | 255 | 394 | 8 | 143 | 1.76e-14 | 72.0 |
Msa0145740 | MtrunA17_Chr1g0211521 | 61.644 | 73 | 28 | 0 | 773 | 845 | 2 | 74 | 4.11e-22 | 92.4 |
Msa0145740 | MtrunA17_Chr1g0211521 | 52.427 | 103 | 18 | 4 | 334 | 405 | 5 | 107 | 1.32e-17 | 79.7 |
Msa0145740 | MtrunA17_Chr2g0331161 | 28.497 | 193 | 105 | 5 | 603 | 787 | 423 | 590 | 3.78e-13 | 73.6 |
Msa0145740 | MtrunA17_Chr2g0315961 | 59.615 | 52 | 21 | 0 | 776 | 827 | 1 | 52 | 2.19e-12 | 63.2 |
Msa0145740 | MtrunA17_Chr8g0362771 | 27.322 | 183 | 103 | 7 | 193 | 357 | 252 | 422 | 1.61e-11 | 68.2 |
Msa0145740 | MtrunA17_Chr8g0362771 | 25.283 | 265 | 147 | 9 | 603 | 859 | 245 | 466 | 2.89e-11 | 67.4 |
Msa0145740 | MtrunA17_Chr1g0192151 | 29.130 | 230 | 138 | 9 | 149 | 362 | 141 | 361 | 1.88e-11 | 67.0 |
Msa0145740 | MtrunA17_Chr4g0014731 | 29.130 | 230 | 138 | 9 | 149 | 362 | 142 | 362 | 1.91e-11 | 67.0 |
Msa0145740 | MtrunA17_Chr6g0456351 | 27.869 | 244 | 133 | 9 | 623 | 851 | 345 | 560 | 2.18e-11 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0145740 | AT5G40010.1 | 60.089 | 451 | 165 | 4 | 408 | 844 | 11 | 460 | 0.0 | 553 |
Msa0145740 | AT5G40010.1 | 47.044 | 406 | 165 | 8 | 1 | 356 | 4 | 409 | 1.24e-118 | 370 |
Msa0145740 | AT3G28580.1 | 59.865 | 446 | 169 | 3 | 408 | 844 | 11 | 455 | 0.0 | 535 |
Msa0145740 | AT3G28580.1 | 47.115 | 416 | 170 | 9 | 1 | 367 | 4 | 418 | 1.11e-115 | 362 |
Msa0145740 | AT3G28510.1 | 57.456 | 456 | 183 | 2 | 408 | 854 | 11 | 464 | 2.94e-175 | 517 |
Msa0145740 | AT3G28510.1 | 43.886 | 458 | 186 | 8 | 4 | 390 | 7 | 464 | 1.52e-119 | 373 |
Msa0145740 | AT3G28540.2 | 56.000 | 450 | 182 | 5 | 408 | 846 | 11 | 455 | 1.92e-166 | 493 |
Msa0145740 | AT3G28540.2 | 45.843 | 421 | 165 | 10 | 1 | 364 | 1 | 415 | 2.09e-111 | 351 |
Msa0145740 | AT3G28540.1 | 56.000 | 450 | 182 | 5 | 408 | 846 | 11 | 455 | 2.60e-166 | 493 |
Msa0145740 | AT3G28540.1 | 45.843 | 421 | 165 | 10 | 1 | 364 | 1 | 415 | 2.69e-111 | 351 |
Msa0145740 | AT3G28580.2 | 56.054 | 446 | 164 | 4 | 408 | 844 | 11 | 433 | 1.34e-165 | 490 |
Msa0145740 | AT3G28580.2 | 45.750 | 400 | 177 | 9 | 1 | 367 | 4 | 396 | 9.78e-103 | 327 |
Msa0145740 | AT3G28600.1 | 49.896 | 479 | 193 | 7 | 409 | 864 | 8 | 462 | 4.28e-154 | 461 |
Msa0145740 | AT3G28600.1 | 46.053 | 456 | 159 | 14 | 8 | 388 | 7 | 450 | 6.18e-114 | 356 |
Msa0145740 | AT3G28610.1 | 48.857 | 481 | 193 | 8 | 409 | 863 | 7 | 460 | 2.07e-152 | 456 |
Msa0145740 | AT3G28610.1 | 47.596 | 416 | 152 | 11 | 6 | 367 | 4 | 407 | 2.68e-114 | 357 |
Msa0145740 | AT3G28520.1 | 53.675 | 449 | 187 | 6 | 412 | 847 | 1 | 441 | 8.80e-152 | 454 |
Msa0145740 | AT3G28520.1 | 42.725 | 433 | 187 | 12 | 12 | 389 | 1 | 427 | 7.34e-94 | 303 |
Msa0145740 | AT3G28570.1 | 49.691 | 485 | 188 | 10 | 400 | 864 | 1 | 449 | 1.76e-147 | 442 |
Msa0145740 | AT3G28570.1 | 43.956 | 455 | 177 | 12 | 8 | 399 | 9 | 448 | 1.11e-106 | 337 |
Msa0145740 | AT3G28570.2 | 49.691 | 485 | 188 | 10 | 400 | 864 | 8 | 456 | 2.05e-147 | 442 |
Msa0145740 | AT3G28570.2 | 43.956 | 455 | 177 | 12 | 8 | 399 | 16 | 455 | 1.65e-106 | 336 |
Msa0145740 | AT5G40000.1 | 49.892 | 465 | 181 | 8 | 409 | 848 | 12 | 449 | 4.26e-146 | 440 |
Msa0145740 | AT5G40000.1 | 46.890 | 418 | 160 | 11 | 1 | 367 | 4 | 410 | 9.91e-111 | 348 |
Msa0145740 | AT3G28600.2 | 47.182 | 479 | 167 | 7 | 409 | 864 | 8 | 423 | 3.98e-136 | 413 |
Msa0145740 | AT3G28600.2 | 45.642 | 436 | 149 | 12 | 9 | 388 | 8 | 411 | 1.02e-105 | 333 |
Msa0145740 | AT4G25835.1 | 44.907 | 432 | 220 | 4 | 409 | 828 | 9 | 434 | 1.50e-117 | 367 |
Msa0145740 | AT4G25835.1 | 36.617 | 467 | 233 | 12 | 1 | 409 | 1 | 462 | 8.41e-82 | 272 |
Msa0145740 | AT5G57480.1 | 41.949 | 472 | 249 | 6 | 409 | 863 | 9 | 472 | 1.87e-116 | 364 |
Msa0145740 | AT5G57480.1 | 34.979 | 486 | 248 | 11 | 1 | 418 | 1 | 486 | 1.43e-80 | 270 |
Msa0145740 | AT3G50940.1 | 42.404 | 441 | 220 | 9 | 420 | 852 | 31 | 445 | 3.99e-111 | 348 |
Msa0145740 | AT3G50940.1 | 40.576 | 382 | 186 | 9 | 20 | 367 | 31 | 405 | 4.82e-85 | 279 |
Msa0145740 | AT3G50930.1 | 42.572 | 451 | 227 | 7 | 416 | 853 | 73 | 504 | 7.52e-109 | 347 |
Msa0145740 | AT3G50930.1 | 36.638 | 464 | 222 | 12 | 16 | 412 | 73 | 531 | 4.33e-80 | 270 |
Msa0145740 | AT4G30250.1 | 42.826 | 460 | 234 | 7 | 409 | 848 | 9 | 459 | 1.62e-104 | 333 |
Msa0145740 | AT4G30250.1 | 36.124 | 418 | 216 | 7 | 1 | 367 | 1 | 418 | 8.26e-75 | 254 |
Msa0145740 | AT4G30250.2 | 42.826 | 460 | 234 | 7 | 409 | 848 | 11 | 461 | 1.95e-104 | 333 |
Msa0145740 | AT4G30250.2 | 36.124 | 418 | 216 | 7 | 1 | 367 | 3 | 420 | 9.62e-75 | 254 |
Msa0145740 | AT2G18193.1 | 41.176 | 459 | 223 | 10 | 409 | 853 | 19 | 444 | 5.01e-101 | 323 |
Msa0145740 | AT2G18193.1 | 38.987 | 395 | 183 | 13 | 15 | 367 | 25 | 403 | 1.39e-76 | 258 |
Msa0145740 | AT5G17760.1 | 41.975 | 405 | 197 | 5 | 462 | 848 | 70 | 454 | 1.17e-96 | 312 |
Msa0145740 | AT5G17760.1 | 40.125 | 319 | 145 | 7 | 133 | 406 | 162 | 479 | 1.26e-68 | 236 |
Msa0145740 | AT5G17740.1 | 39.323 | 473 | 246 | 13 | 409 | 865 | 18 | 465 | 4.29e-96 | 311 |
Msa0145740 | AT5G17740.1 | 33.987 | 459 | 245 | 11 | 4 | 405 | 13 | 470 | 4.28e-72 | 247 |
Msa0145740 | AT2G18190.1 | 39.520 | 458 | 235 | 8 | 409 | 853 | 20 | 448 | 2.91e-95 | 308 |
Msa0145740 | AT2G18190.1 | 37.500 | 392 | 196 | 12 | 15 | 367 | 26 | 407 | 3.13e-71 | 243 |
Msa0145740 | AT1G43910.1 | 39.868 | 454 | 246 | 8 | 410 | 855 | 20 | 454 | 2.34e-91 | 297 |
Msa0145740 | AT1G43910.1 | 36.628 | 344 | 176 | 10 | 101 | 409 | 118 | 454 | 5.66e-58 | 206 |
Msa0145740 | AT4G05380.1 | 38.767 | 454 | 242 | 9 | 410 | 851 | 21 | 450 | 1.64e-89 | 291 |
Msa0145740 | AT4G05380.1 | 39.815 | 324 | 155 | 7 | 99 | 388 | 117 | 434 | 7.58e-66 | 228 |
Msa0145740 | AT5G17730.1 | 35.463 | 454 | 261 | 8 | 409 | 853 | 18 | 448 | 3.22e-89 | 291 |
Msa0145740 | AT5G17730.1 | 35.340 | 382 | 192 | 10 | 62 | 391 | 72 | 450 | 1.01e-66 | 230 |
Msa0145740 | AT5G17750.1 | 37.019 | 416 | 208 | 8 | 409 | 813 | 18 | 390 | 3.64e-82 | 270 |
Msa0145740 | AT5G17750.1 | 46.122 | 245 | 110 | 3 | 136 | 359 | 130 | 373 | 7.43e-65 | 223 |
Msa0145740 | AT2G46620.1 | 31.087 | 460 | 255 | 8 | 411 | 855 | 11 | 423 | 2.04e-69 | 238 |
Msa0145740 | AT2G46620.1 | 32.865 | 356 | 177 | 8 | 46 | 367 | 51 | 378 | 4.04e-51 | 187 |
Msa0145740 | AT5G17760.2 | 38.951 | 267 | 149 | 1 | 462 | 714 | 70 | 336 | 7.63e-56 | 196 |
Msa0145740 | AT5G17760.2 | 40.994 | 161 | 76 | 3 | 133 | 274 | 162 | 322 | 1.56e-36 | 141 |
Msa0145740 | AT3G28560.1 | 44.550 | 211 | 99 | 3 | 408 | 607 | 11 | 214 | 2.99e-49 | 175 |
Msa0145740 | AT3G28560.1 | 35.185 | 216 | 103 | 9 | 4 | 190 | 7 | 214 | 4.98e-26 | 108 |
Msa0145740 | AT3G29800.1 | 31.897 | 348 | 182 | 9 | 505 | 845 | 78 | 377 | 4.35e-45 | 169 |
Msa0145740 | AT3G29800.1 | 28.804 | 368 | 185 | 12 | 62 | 381 | 39 | 377 | 1.98e-32 | 132 |
Msa0145740 | AT4G05340.1 | 49.485 | 97 | 39 | 2 | 707 | 800 | 4 | 93 | 4.24e-20 | 86.3 |
Msa0145740 | AT4G05340.1 | 50.617 | 81 | 40 | 0 | 278 | 358 | 13 | 93 | 2.01e-19 | 84.3 |
Msa0145740 | AT3G05530.1 | 29.565 | 230 | 137 | 9 | 149 | 362 | 142 | 362 | 5.63e-12 | 69.3 |
Msa0145740 | AT3G16290.1 | 26.523 | 279 | 151 | 10 | 603 | 861 | 415 | 659 | 7.88e-12 | 69.7 |
Msa0145740 | AT1G09100.1 | 30.622 | 209 | 121 | 8 | 149 | 342 | 141 | 340 | 4.25e-11 | 66.6 |
Find 143 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACATCTCTATTGTGTTTA+TGG | 0.043514 | 1_4:+5461468 | None:intergenic |
ACTAGTAATGTTACACTTTC+TGG | 0.065042 | 1_4:-5460912 | Msa0145740:CDS |
GCAAGTCAGGTAACACTTTC+TGG | 0.123714 | 1_4:-5463946 | Msa0145740:intron |
TTGCAAGCTTAATGTTTATA+TGG | 0.183844 | 1_4:-5464941 | Msa0145740:CDS |
AAAAGAGGTTATTTACTTTA+TGG | 0.186213 | 1_4:-5461212 | Msa0145740:CDS |
ACCAAACATGTTTGAACTTT+GGG | 0.187189 | 1_4:-5464982 | None:intergenic |
ATACTAATAGTGGATCTTAT+TGG | 0.207885 | 1_4:-5461370 | Msa0145740:CDS |
AAGAGAGGCTATTTGCTTTA+TGG | 0.209267 | 1_4:-5464270 | Msa0145740:CDS |
AACAAATTATGTGGAGAAAT+TGG | 0.217945 | 1_4:-5460826 | Msa0145740:CDS |
TGAATTTCATTGATGGATTA+TGG | 0.245019 | 1_4:-5460884 | Msa0145740:CDS |
CATCTCAGCCTCTTCCTTAG+AGG | 0.245609 | 1_4:+5463591 | None:intergenic |
TTGCTTCCTTGATGTTTGTT+TGG | 0.248657 | 1_4:-5461868 | Msa0145740:CDS |
AAACATCAAGGAAGCAATTA+TGG | 0.257321 | 1_4:+5461874 | None:intergenic |
TGAATTTCATTGATGGGATT+TGG | 0.272209 | 1_4:-5463918 | Msa0145740:CDS |
AAAAGAAGGTAAAGCAATTA+AGG | 0.288836 | 1_4:-5461417 | Msa0145740:CDS |
TTTGAACTTTGGGGTCTAAT+AGG | 0.288966 | 1_4:-5464972 | Msa0145740:CDS |
CACCTTGAAGTTTCTTTGCT+TGG | 0.291226 | 1_4:+5464736 | None:intergenic |
TTTGTGAGTATTTCTCAATT+TGG | 0.291370 | 1_4:+5461807 | None:intergenic |
ATCTTACCTTAACCATGTTT+TGG | 0.294915 | 1_4:-5464520 | Msa0145740:CDS |
CTTTGCTTGTGTTGATGCTT+TGG | 0.296328 | 1_4:+5461676 | None:intergenic |
AATTTGGTTCCTAAGTTGAT+AGG | 0.297058 | 1_4:+5461823 | None:intergenic |
TGCTTCCTTGATGTTTGTTT+GGG | 0.301724 | 1_4:-5461867 | Msa0145740:CDS |
TGAAACATTAGCAATGGATT+TGG | 0.307810 | 1_4:-5461315 | Msa0145740:CDS |
AATGAAACAGAATTTGTGTT+AGG | 0.312689 | 1_4:+5464612 | None:intergenic |
AAAGAGTATTATGCGAAAAT+TGG | 0.315513 | 1_4:-5464303 | Msa0145740:CDS |
TTGAAGGGGTTAAGTTTGTT+TGG | 0.318297 | 1_4:-5464653 | Msa0145740:intron |
AACCAAACATGTTTGAACTT+TGG | 0.318708 | 1_4:-5464983 | None:intergenic |
ATTGAATCACATAATTTGTT+TGG | 0.322491 | 1_4:-5460705 | Msa0145740:CDS |
AATGTATAAGAAAGCTTCAT+TGG | 0.322787 | 1_4:+5464788 | None:intergenic |
TTTGATTCAAGCACTTGAAT+TGG | 0.339872 | 1_4:-5460577 | Msa0145740:CDS |
GCATCACCAGAAGCAGTCTT+TGG | 0.340573 | 1_4:+5460618 | None:intergenic |
CCTTAGAGGTTCTAAGTGCT+TGG | 0.356753 | 1_4:+5463605 | None:intergenic |
GGACTATTGAATTTCATTGA+TGG | 0.363024 | 1_4:-5460891 | Msa0145740:CDS |
TTGATGCCAAAGACTGCTTC+TGG | 0.363892 | 1_4:-5460624 | Msa0145740:CDS |
GATTGTTCGCTTGATCTTAC+CGG | 0.367967 | 1_4:-5464087 | Msa0145740:CDS |
CTTTATGGTCCTCCTGGAAC+AGG | 0.377541 | 1_4:-5464255 | Msa0145740:CDS |
GCTGCCATGGCAAATTTGTT+AGG | 0.379161 | 1_4:-5461158 | Msa0145740:CDS |
GGTGCTAAGGTAATTCTCTA+TGG | 0.385040 | 1_4:+5461697 | None:intergenic |
TGAACTCATGAAATGTGATT+TGG | 0.386423 | 1_4:+5461756 | None:intergenic |
CCAAGCACTTAGAACCTCTA+AGG | 0.388467 | 1_4:-5463605 | Msa0145740:CDS |
GTAATTCTCTATGGAAGAAT+AGG | 0.394421 | 1_4:+5461706 | None:intergenic |
CTTATTACATTTAGTAAAGC+TGG | 0.395330 | 1_4:-5461266 | Msa0145740:CDS |
AGGAGGAAGAGAAGGATTCA+AGG | 0.400269 | 1_4:-5460974 | Msa0145740:CDS |
TGCAAGCTTAATGTTTATAT+GGG | 0.401015 | 1_4:-5464940 | Msa0145740:CDS |
TCTTGAATTGACTGCTGTTA+AGG | 0.402564 | 1_4:-5461120 | Msa0145740:CDS |
TTGAAGTTTCTTTGCTTGGT+TGG | 0.404145 | 1_4:+5464740 | None:intergenic |
CTTTATGGTCCTCCAGGGAC+TGG | 0.407910 | 1_4:-5461197 | Msa0145740:CDS |
GGTGAGTTCTATGCAAGAAT+TGG | 0.409467 | 1_4:-5461245 | Msa0145740:CDS |
ATGCAAGAATTGGAAGGGCT+TGG | 0.415600 | 1_4:-5461235 | Msa0145740:CDS |
ATTGTTGACTTTCCAGTCCC+TGG | 0.415863 | 1_4:+5461185 | None:intergenic |
TGGTCAAAGGAGGAAGAAAA+AGG | 0.417013 | 1_4:-5461009 | Msa0145740:CDS |
GGGTTATTGAATTTCATTGA+TGG | 0.427942 | 1_4:-5463925 | Msa0145740:CDS |
GTGTTGATGCTTTGGTGCTA+AGG | 0.429999 | 1_4:+5461684 | None:intergenic |
AGGAAACTTTATACTAATAG+TGG | 0.434469 | 1_4:-5461380 | Msa0145740:CDS |
CAAGTCAGGTAACACTTTCT+GGG | 0.437874 | 1_4:-5463945 | Msa0145740:intron |
AATTCAATGGAGTTAAACTT+TGG | 0.438355 | 1_4:-5461577 | Msa0145740:CDS |
ATTGGAAGGGCTTGGAAAAG+AGG | 0.439570 | 1_4:-5461227 | Msa0145740:CDS |
GTTATCATATTGTGGATTTG+AGG | 0.452370 | 1_4:-5460760 | Msa0145740:CDS |
ATCTCATCCTTTGTTCGAGA+TGG | 0.457463 | 1_4:-5463734 | Msa0145740:intron |
AACAAAAGGGTAACAAAAGT+TGG | 0.459264 | 1_4:+5464851 | None:intergenic |
TATTTACTTTATGGTCCTCC+AGG | 0.463635 | 1_4:-5461203 | Msa0145740:CDS |
ATGCGAAAATTGGTAAGCCT+TGG | 0.466070 | 1_4:-5464293 | Msa0145740:CDS |
ATGAAACAGAATTTGTGTTA+GGG | 0.466214 | 1_4:+5464613 | None:intergenic |
AAAGGAGAGAAAGGAAGAGG+AGG | 0.467105 | 1_4:-5460991 | Msa0145740:CDS |
AAAGTCTTTAGTTCTAAAGA+TGG | 0.468242 | 1_4:-5464703 | Msa0145740:CDS |
AAAGGAAGAGGAGGAAGAGA+AGG | 0.471794 | 1_4:-5460982 | Msa0145740:CDS |
TATTTGCTTTATGGTCCTCC+TGG | 0.473621 | 1_4:-5464261 | Msa0145740:CDS |
AACCAAGCAAAGAAACTTCA+AGG | 0.474512 | 1_4:-5464738 | Msa0145740:CDS |
GTCAACAATGATTGCTGCCA+TGG | 0.475118 | 1_4:-5461171 | Msa0145740:CDS |
CCTTACCTTGTTCCAAAACA+TGG | 0.476787 | 1_4:+5464508 | None:intergenic |
AACATTTGAAACATTAGCAA+TGG | 0.477196 | 1_4:-5461321 | Msa0145740:CDS |
ATTTGGTTCCTAAGTTGATA+GGG | 0.478933 | 1_4:+5461824 | None:intergenic |
CTTAATTATGTACTAAAAGA+AGG | 0.479074 | 1_4:-5461431 | Msa0145740:CDS |
CATATTGAGTTGTCTTATTG+TGG | 0.480153 | 1_4:-5463802 | Msa0145740:CDS |
GATCCTGCATTGGTTAGAAA+AGG | 0.480913 | 1_4:-5460804 | Msa0145740:CDS |
GGTTATTGAATTTCATTGAT+GGG | 0.481156 | 1_4:-5463924 | Msa0145740:CDS |
CAATGGAGTTAAACTTTGGT+GGG | 0.482273 | 1_4:-5461573 | Msa0145740:CDS |
CTTGTTCCAAAACATGGTTA+AGG | 0.486598 | 1_4:+5464514 | None:intergenic |
TGAAATGTGATTTGGATGTA+AGG | 0.487481 | 1_4:+5461764 | None:intergenic |
AACAATATGTGAATTGTTGA+AGG | 0.490020 | 1_4:-5460682 | Msa0145740:CDS |
TGATCTTGTTACATTCAGTA+AGG | 0.490186 | 1_4:-5464328 | Msa0145740:CDS |
AAATGCTCAGCAACATCAGC+TGG | 0.493061 | 1_4:+5460645 | None:intergenic |
TCAATGGAGTTAAACTTTGG+TGG | 0.498351 | 1_4:-5461574 | Msa0145740:CDS |
GGGATTTGGTCTGCTAGTAC+TGG | 0.502830 | 1_4:-5463904 | Msa0145740:CDS |
TAAGAAAGAAGCAGAGATGA+AGG | 0.504395 | 1_4:-5463563 | Msa0145740:CDS |
GATTGCTCACTTGATTTGAC+TGG | 0.504911 | 1_4:-5461029 | Msa0145740:CDS |
GCAATTGTCTCAAAAGAAGA+TGG | 0.507729 | 1_4:+5464384 | None:intergenic |
GTTAGATTCTTTGAGAACAT+TGG | 0.509702 | 1_4:-5464825 | Msa0145740:CDS |
CAGGTAATGGTGAATATGAA+AGG | 0.510294 | 1_4:-5464440 | Msa0145740:CDS |
GAAGTAGGTGATGAATTCAA+TGG | 0.510659 | 1_4:-5461590 | Msa0145740:CDS |
ATGAAGGCTGAGAAAGAAGA+AGG | 0.511615 | 1_4:-5463547 | Msa0145740:CDS |
ATTTGAGGCATTCAAGATGT+TGG | 0.512524 | 1_4:-5460745 | Msa0145740:CDS |
CGGTCAGAGGAAGACAGATT+CGG | 0.513344 | 1_4:-5464067 | Msa0145740:CDS |
CATATAGAGTTATCATATTG+TGG | 0.514055 | 1_4:-5460768 | Msa0145740:CDS |
GGAGGAAGAGAAGGATTCAA+GGG | 0.514417 | 1_4:-5460973 | Msa0145740:CDS |
GCTAATGTTTCAAATGTTGA+AGG | 0.514554 | 1_4:+5461326 | None:intergenic |
CCAAACATGTTTGAACTTTG+GGG | 0.515294 | 1_4:-5464981 | None:intergenic |
GAATTGGCAAAAGAAGAAGC+TGG | 0.517115 | 1_4:-5460561 | Msa0145740:CDS |
AGCAAATAGCCTCTCTTCCA+AGG | 0.530468 | 1_4:+5464276 | None:intergenic |
TTTGATTCGTCGTGGACGAA+TGG | 0.533266 | 1_4:-5463830 | Msa0145740:CDS |
TCAAGCACTTGTTCTTAGCA+TGG | 0.533913 | 1_4:-5461624 | Msa0145740:CDS |
AGGTAATGGTGAATATGAAA+GGG | 0.535037 | 1_4:-5464439 | Msa0145740:CDS |
ATCACATTTCATGAGTTCAC+TGG | 0.535244 | 1_4:-5461752 | Msa0145740:CDS |
CACTTGATTTGACTGGTCAA+AGG | 0.548667 | 1_4:-5461022 | Msa0145740:CDS |
AATTGGCAAAAGAAGAAGCT+GGG | 0.551247 | 1_4:-5460560 | Msa0145740:CDS |
CGCTTGATCTTACCGGTCAG+AGG | 0.554416 | 1_4:-5464080 | Msa0145740:CDS |
GACCGAACCATCTCGAACAA+AGG | 0.555408 | 1_4:+5463727 | None:intergenic |
ATTGGTTAGAAAAGGTAGAA+TGG | 0.558531 | 1_4:-5460796 | Msa0145740:CDS |
CGAATCTGTCTTCCTCTGAC+CGG | 0.558778 | 1_4:+5464068 | None:intergenic |
ATTGGTAAGCCTTGGAAGAG+AGG | 0.563864 | 1_4:-5464285 | Msa0145740:CDS |
ATGGATGATCATGAAGAAGT+AGG | 0.568240 | 1_4:-5461605 | Msa0145740:CDS |
ACTTAGAACCTCTAAGGAAG+AGG | 0.569363 | 1_4:-5463599 | Msa0145740:CDS |
GCTGAGAAAGAAGAAGGGAC+AGG | 0.571855 | 1_4:-5463541 | Msa0145740:intron |
GTTAAACTTTGGTGGGCTAG+TGG | 0.573542 | 1_4:-5461566 | Msa0145740:CDS |
AATAGCCCAAACAAACATCA+AGG | 0.574656 | 1_4:+5461862 | None:intergenic |
GGAATTATGGAGGAAAGAGA+TGG | 0.581168 | 1_4:-5460939 | Msa0145740:CDS |
ATTTACTTTATGGTCCTCCA+GGG | 0.585163 | 1_4:-5461202 | Msa0145740:CDS |
TATATTCACTACTAACTATG+TGG | 0.586952 | 1_4:-5463869 | Msa0145740:CDS |
GGAGAAATTGGATCCTGCAT+TGG | 0.595123 | 1_4:-5460814 | Msa0145740:CDS |
AATATGAAAGGGGAGGTAAG+TGG | 0.596088 | 1_4:-5464428 | Msa0145740:CDS |
AGTTCTATGCAAGAATTGGA+AGG | 0.596527 | 1_4:-5461241 | Msa0145740:CDS |
ACACAAGCAAAGAGACTCAA+AGG | 0.600263 | 1_4:-5461665 | Msa0145740:CDS |
GGTAGCTGATGAAGATGTTG+AGG | 0.602813 | 1_4:-5463647 | Msa0145740:CDS |
TTGATTTGACTGGTCAAAGG+AGG | 0.608711 | 1_4:-5461019 | Msa0145740:CDS |
AGAAGCTGGGGTGAAATCAG+TGG | 0.621039 | 1_4:-5460547 | Msa0145740:CDS |
GAAATGTGATTTGGATGTAA+GGG | 0.622484 | 1_4:+5461765 | None:intergenic |
GTTGACTTTCCAGTCCCTGG+AGG | 0.623801 | 1_4:+5461188 | None:intergenic |
TGAAGGCTGAGAAAGAAGAA+GGG | 0.627565 | 1_4:-5463546 | Msa0145740:CDS |
AATCACGAGTAAATCTGTTG+TGG | 0.629066 | 1_4:-5464124 | Msa0145740:CDS |
GATCAAGCTTTGATTCGTCG+TGG | 0.629566 | 1_4:-5463838 | Msa0145740:CDS |
GTTCTATGCAAGAATTGGAA+GGG | 0.632683 | 1_4:-5461240 | Msa0145740:CDS |
ATGTTGAGGCATCATTAGAG+AGG | 0.635432 | 1_4:-5463633 | Msa0145740:CDS |
TTAAGGTGAGAAATAGACAA+AGG | 0.654965 | 1_4:-5461400 | Msa0145740:CDS |
ATAGCCTAACAAATTTGCCA+TGG | 0.654970 | 1_4:+5461154 | None:intergenic |
AATGGTGAATATGAAAGGGG+AGG | 0.665295 | 1_4:-5464435 | Msa0145740:CDS |
GGTAATGGTGAATATGAAAG+GGG | 0.666341 | 1_4:-5464438 | Msa0145740:CDS |
ATGAGTGCATGAACTTGATG+AGG | 0.669050 | 1_4:+5464897 | None:intergenic |
GGATTATGGTCTGCATGTGG+AGG | 0.679090 | 1_4:-5460870 | Msa0145740:CDS |
AAGGATGTTCAAACACAACA+TGG | 0.681122 | 1_4:+5461345 | None:intergenic |
TTAAGGATAACACTGAGTTG+AGG | 0.695176 | 1_4:-5461103 | Msa0145740:CDS |
GACTGCGATGAAATGTGAGA+AGG | 0.695268 | 1_4:+5464562 | None:intergenic |
ATTGGCAAAAGAAGAAGCTG+GGG | 0.709071 | 1_4:-5460559 | Msa0145740:CDS |
GATGGATTATGGTCTGCATG+TGG | 0.714258 | 1_4:-5460873 | Msa0145740:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTATAAATATTTCTTTG+AGG | - | chr1_4:5462445-5462464 | Msa0145740:intron | 10.0% |
!! | TAAATAAACAGTAATACTTT+AGG | - | chr1_4:5462505-5462524 | Msa0145740:intron | 15.0% |
!!! | TTAAAATCTCATTTTCATAT+TGG | - | chr1_4:5462540-5462559 | Msa0145740:intron | 15.0% |
!!! | TTTTTTTAATAATAAAAGCC+AGG | - | chr1_4:5462618-5462637 | Msa0145740:intron | 15.0% |
!!! | TTATTTATCAGTTTTCTTTA+AGG | - | chr1_4:5462987-5463006 | Msa0145740:intron | 15.0% |
!!! | ATTATACAAAAAAAGTTGAT+TGG | + | chr1_4:5463188-5463207 | None:intergenic | 15.0% |
!!! | ATAAATAAACAAGTTTTCTA+AGG | - | chr1_4:5463233-5463252 | Msa0145740:intron | 15.0% |
!! | TAAGTTAGATTAATATGCTA+AGG | - | chr1_4:5462162-5462181 | Msa0145740:intron | 20.0% |
!!! | TTTATATGTTTGTTGATAAC+TGG | - | chr1_4:5462301-5462320 | Msa0145740:intron | 20.0% |
!!! | AAATATTTCTTTGAGGAATA+TGG | - | chr1_4:5462452-5462471 | Msa0145740:intron | 20.0% |
!!! | TTTATTTAAAATAGTACCTG+AGG | + | chr1_4:5462493-5462512 | None:intergenic | 20.0% |
!!! | TTATTTATTTCTTCATGTCA+AGG | + | chr1_4:5462566-5462585 | None:intergenic | 20.0% |
!! | AAAAAATTGATCATGTAGTT+TGG | + | chr1_4:5462958-5462977 | None:intergenic | 20.0% |
!!! | ACTTTTATCAGTTTTCTTTA+AGG | - | chr1_4:5463046-5463065 | Msa0145740:intron | 20.0% |
!! | ACATAATGTGAATTTAGAAA+TGG | + | chr1_4:5463518-5463537 | None:intergenic | 20.0% |
!! | AATAGAAAGAGCTTAAAAAA+AGG | - | chr1_4:5463544-5463563 | Msa0145740:CDS | 20.0% |
!! | AAGGAAAAAAAAATGAAACA+AGG | - | chr1_4:5463582-5463601 | Msa0145740:CDS | 20.0% |
!!! | AAGTGAAAATGAATTTTGTT+TGG | + | chr1_4:5463973-5463992 | None:intergenic | 20.0% |
!! | CTTAATTATGTACTAAAAGA+AGG | - | chr1_4:5464071-5464090 | Msa0145740:CDS | 20.0% |
!! | AAAAGAGGTTATTTACTTTA+TGG | - | chr1_4:5464290-5464309 | Msa0145740:CDS | 20.0% |
!!! | ATTGAATCACATAATTTGTT+TGG | - | chr1_4:5464797-5464816 | Msa0145740:CDS | 20.0% |
! | TTGCAAGCTTAATGTTTATA+TGG | - | chr1_4:5460561-5460580 | Msa0145740:CDS | 25.0% |
! | TGCAAGCTTAATGTTTATAT+GGG | - | chr1_4:5460562-5460581 | Msa0145740:CDS | 25.0% |
! | AATGTATAAGAAAGCTTCAT+TGG | + | chr1_4:5460717-5460736 | None:intergenic | 25.0% |
!!! | AAAGTCTTTAGTTCTAAAGA+TGG | - | chr1_4:5460799-5460818 | Msa0145740:CDS | 25.0% |
!!! | AAGTTTTATGATGAGTTTGA+AGG | - | chr1_4:5460833-5460852 | Msa0145740:CDS | 25.0% |
!!! | AGTTTTATGATGAGTTTGAA+GGG | - | chr1_4:5460834-5460853 | Msa0145740:CDS | 25.0% |
! | ATGAAACAGAATTTGTGTTA+GGG | + | chr1_4:5460892-5460911 | None:intergenic | 25.0% |
! | AATGAAACAGAATTTGTGTT+AGG | + | chr1_4:5460893-5460912 | None:intergenic | 25.0% |
!! | ACAATCTCTTTCTTCTTTTT+AGG | + | chr1_4:5461151-5461170 | None:intergenic | 25.0% |
!!! | AAAGAGTATTATGCGAAAAT+TGG | - | chr1_4:5461199-5461218 | Msa0145740:CDS | 25.0% |
! | TGAAAAATAATGCTGAGTTA+AGG | - | chr1_4:5461341-5461360 | Msa0145740:CDS | 25.0% |
! | GGTTATTGAATTTCATTGAT+GGG | - | chr1_4:5461578-5461597 | Msa0145740:CDS | 25.0% |
! | TATATTCACTACTAACTATG+TGG | - | chr1_4:5461633-5461652 | Msa0145740:CDS | 25.0% |
! | CTCAACAACTATTTAAAAGA+TGG | - | chr1_4:5462220-5462239 | Msa0145740:intron | 25.0% |
!!! | AGTAATACTTTAGGTTCTTT+TGG | - | chr1_4:5462514-5462533 | Msa0145740:intron | 25.0% |
!! | TACATCATTTCCTTTTTGTT+TGG | + | chr1_4:5462687-5462706 | None:intergenic | 25.0% |
! | AAATGAGTTAAGGTTATTTG+GGG | + | chr1_4:5462741-5462760 | None:intergenic | 25.0% |
! | CAAATGAGTTAAGGTTATTT+GGG | + | chr1_4:5462742-5462761 | None:intergenic | 25.0% |
!!! | GAAATTGACTTCAACTTTTT+TGG | - | chr1_4:5463134-5463153 | Msa0145740:intron | 25.0% |
! | AATAAGAAGTGAGAAAAACA+AGG | + | chr1_4:5463304-5463323 | None:intergenic | 25.0% |
!!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr1_4:5463303-5463322 | Msa0145740:intron | 25.0% |
! | TTCTTATTGGTCAAAAACAA+TGG | - | chr1_4:5463316-5463335 | Msa0145740:intron | 25.0% |
! | TCTTATTGGTCAAAAACAAT+GGG | - | chr1_4:5463317-5463336 | Msa0145740:intron | 25.0% |
! | TTTGTCTTATAAAAAGGTGA+AGG | + | chr1_4:5463486-5463505 | None:intergenic | 25.0% |
!!! | AATTTTTTCCCTATCAACTT+AGG | - | chr1_4:5463670-5463689 | Msa0145740:intron | 25.0% |
! | TTTGTGAGTATTTCTCAATT+TGG | + | chr1_4:5463698-5463717 | None:intergenic | 25.0% |
! | TGAGAAATACTCACAAAAAT+TGG | - | chr1_4:5463701-5463720 | Msa0145740:intron | 25.0% |
! | AATTCAATGGAGTTAAACTT+TGG | - | chr1_4:5463925-5463944 | Msa0145740:CDS | 25.0% |
! | ATCACAACATAGATGAAAAA+AGG | - | chr1_4:5463994-5464013 | Msa0145740:intron | 25.0% |
! | AAAAGAAGGTAAAGCAATTA+AGG | - | chr1_4:5464085-5464104 | Msa0145740:CDS | 25.0% |
! | AGGAAACTTTATACTAATAG+TGG | - | chr1_4:5464122-5464141 | Msa0145740:CDS | 25.0% |
!!! | ATACTAATAGTGGATCTTAT+TGG | - | chr1_4:5464132-5464151 | Msa0145740:CDS | 25.0% |
!! | AACATTTGAAACATTAGCAA+TGG | - | chr1_4:5464181-5464200 | Msa0145740:CDS | 25.0% |
! | CTTATTACATTTAGTAAAGC+TGG | - | chr1_4:5464236-5464255 | Msa0145740:intron | 25.0% |
!!! | TGAATTTCATTGATGGATTA+TGG | - | chr1_4:5464618-5464637 | Msa0145740:CDS | 25.0% |
!! | AGTTTTCACAACAAATTATG+TGG | - | chr1_4:5464667-5464686 | Msa0145740:intron | 25.0% |
! | AACAAATTATGTGGAGAAAT+TGG | - | chr1_4:5464676-5464695 | Msa0145740:CDS | 25.0% |
! | CATATAGAGTTATCATATTG+TGG | - | chr1_4:5464734-5464753 | Msa0145740:CDS | 25.0% |
! | AACAATATGTGAATTGTTGA+AGG | - | chr1_4:5464820-5464839 | Msa0145740:CDS | 25.0% |
AACAAAAGGGTAACAAAAGT+TGG | + | chr1_4:5460654-5460673 | None:intergenic | 30.0% | |
AGAATCTAACCTCAACAAAA+GGG | + | chr1_4:5460667-5460686 | None:intergenic | 30.0% | |
AAGAATCTAACCTCAACAAA+AGG | + | chr1_4:5460668-5460687 | None:intergenic | 30.0% | |
! | GTTAGATTCTTTGAGAACAT+TGG | - | chr1_4:5460677-5460696 | Msa0145740:CDS | 30.0% |
! | GTTTTATGATGAGTTTGAAG+GGG | - | chr1_4:5460835-5460854 | Msa0145740:CDS | 30.0% |
! | ATCTTACCTTAACCATGTTT+TGG | - | chr1_4:5460982-5461001 | Msa0145740:CDS | 30.0% |
! | AGGTAATGGTGAATATGAAA+GGG | - | chr1_4:5461063-5461082 | Msa0145740:CDS | 30.0% |
TGATCTTGTTACATTCAGTA+AGG | - | chr1_4:5461174-5461193 | Msa0145740:CDS | 30.0% | |
!! | CTCAGCATTATTTTTCACAT+TGG | + | chr1_4:5461338-5461357 | None:intergenic | 30.0% |
! | GAGTTAAGGAAACTTTTGAT+TGG | - | chr1_4:5461355-5461374 | Msa0145740:CDS | 30.0% |
AGAAAAAGAGGACAAAAATG+AGG | - | chr1_4:5461468-5461487 | Msa0145740:CDS | 30.0% | |
GGGTTATTGAATTTCATTGA+TGG | - | chr1_4:5461577-5461596 | Msa0145740:CDS | 30.0% | |
TGAATTTCATTGATGGGATT+TGG | - | chr1_4:5461584-5461603 | Msa0145740:CDS | 30.0% | |
! | CATATTGAGTTGTCTTATTG+TGG | - | chr1_4:5461700-5461719 | Msa0145740:CDS | 30.0% |
!!! | TTGTCTTATTGTGGTTTTGA+TGG | - | chr1_4:5461709-5461728 | Msa0145740:CDS | 30.0% |
!!! | TTTTGATGGATTCAAAATGC+TGG | - | chr1_4:5461723-5461742 | Msa0145740:CDS | 30.0% |
! | TATTGCCTAGGAATTTTCAT+TGG | + | chr1_4:5462052-5462071 | None:intergenic | 30.0% |
! | TAATGACTTGCAGAATAGTA+TGG | + | chr1_4:5462363-5462382 | None:intergenic | 30.0% |
! | ATTTAAAATAGTACCTGAGG+AGG | + | chr1_4:5462490-5462509 | None:intergenic | 30.0% |
AATGAGTTAAGGTTATTTGG+GGG | + | chr1_4:5462740-5462759 | None:intergenic | 30.0% | |
GCAAATGAGTTAAGGTTATT+TGG | + | chr1_4:5462743-5462762 | None:intergenic | 30.0% | |
AAAATGCAGCAAATGAGTTA+AGG | + | chr1_4:5462751-5462770 | None:intergenic | 30.0% | |
ATTCTTGGTTTCTATCAAGA+AGG | - | chr1_4:5462857-5462876 | Msa0145740:intron | 30.0% | |
AGAGTAGTTGCCATAAATTA+CGG | + | chr1_4:5462909-5462928 | None:intergenic | 30.0% | |
TTGTCTATATCTTCACATGT+CGG | + | chr1_4:5463160-5463179 | None:intergenic | 30.0% | |
CCTTTGTGAATAATGTTATG+TGG | + | chr1_4:5463213-5463232 | None:intergenic | 30.0% | |
CCACATAACATTATTCACAA+AGG | - | chr1_4:5463210-5463229 | Msa0145740:intron | 30.0% | |
!! | ACAAGTTTTCTAAGGAGTAA+TGG | - | chr1_4:5463241-5463260 | Msa0145740:intron | 30.0% |
TCAACAAAGTTGTCATCAAA+TGG | + | chr1_4:5463278-5463297 | None:intergenic | 30.0% | |
CTTATTGGTCAAAAACAATG+GGG | - | chr1_4:5463318-5463337 | Msa0145740:intron | 30.0% | |
!!! | AACCACTTTTTGACAACTTT+TGG | + | chr1_4:5463401-5463420 | None:intergenic | 30.0% |
! | ACCTTTTTATAAGACAAAGC+TGG | - | chr1_4:5463488-5463507 | Msa0145740:intron | 30.0% |
! | TCCAGCTTTGTCTTATAAAA+AGG | + | chr1_4:5463492-5463511 | None:intergenic | 30.0% |
AAACATCAAGGAAGCAATTA+TGG | + | chr1_4:5463631-5463650 | None:intergenic | 30.0% | |
!! | ATTTGGTTCCTAAGTTGATA+GGG | + | chr1_4:5463681-5463700 | None:intergenic | 30.0% |
!! | AATTTGGTTCCTAAGTTGAT+AGG | + | chr1_4:5463682-5463701 | None:intergenic | 30.0% |
! | GAAATGTGATTTGGATGTAA+GGG | + | chr1_4:5463740-5463759 | None:intergenic | 30.0% |
! | TGAAATGTGATTTGGATGTA+AGG | + | chr1_4:5463741-5463760 | None:intergenic | 30.0% |
TGAACTCATGAAATGTGATT+TGG | + | chr1_4:5463749-5463768 | None:intergenic | 30.0% | |
GTAATTCTCTATGGAAGAAT+AGG | + | chr1_4:5463799-5463818 | None:intergenic | 30.0% | |
TCACATCTCTATTGTGTTTA+TGG | + | chr1_4:5464037-5464056 | None:intergenic | 30.0% | |
! | CACAATAGAGATGTGATTTT+AGG | - | chr1_4:5464041-5464060 | Msa0145740:CDS | 30.0% |
TTAAGGTGAGAAATAGACAA+AGG | - | chr1_4:5464102-5464121 | Msa0145740:CDS | 30.0% | |
GCTAATGTTTCAAATGTTGA+AGG | + | chr1_4:5464179-5464198 | None:intergenic | 30.0% | |
! | TGAAACATTAGCAATGGATT+TGG | - | chr1_4:5464187-5464206 | Msa0145740:CDS | 30.0% |
ACTAGTAATGTTACACTTTC+TGG | - | chr1_4:5464590-5464609 | Msa0145740:CDS | 30.0% | |
GGACTATTGAATTTCATTGA+TGG | - | chr1_4:5464611-5464630 | Msa0145740:CDS | 30.0% | |
ATTGGTTAGAAAAGGTAGAA+TGG | - | chr1_4:5464706-5464725 | Msa0145740:CDS | 30.0% | |
GTTATCATATTGTGGATTTG+AGG | - | chr1_4:5464742-5464761 | Msa0145740:CDS | 30.0% | |
TTTGATTCAAGCACTTGAAT+TGG | - | chr1_4:5464925-5464944 | Msa0145740:CDS | 30.0% | |
!! | TTTGAACTTTGGGGTCTAAT+AGG | - | chr1_4:5460530-5460549 | Msa0145740:CDS | 35.0% |
! | CTTTTGTTACCCTTTTGTTG+AGG | - | chr1_4:5460655-5460674 | Msa0145740:CDS | 35.0% |
TTGAAGTTTCTTTGCTTGGT+TGG | + | chr1_4:5460765-5460784 | None:intergenic | 35.0% | |
AACCAAGCAAAGAAACTTCA+AGG | - | chr1_4:5460764-5460783 | Msa0145740:CDS | 35.0% | |
! | TTGAAGGGGTTAAGTTTGTT+TGG | - | chr1_4:5460849-5460868 | Msa0145740:CDS | 35.0% |
!! | TAGAATCTTTTGTCTGAAGC+TGG | + | chr1_4:5460920-5460939 | None:intergenic | 35.0% |
CTTGTTCCAAAACATGGTTA+AGG | + | chr1_4:5460991-5461010 | None:intergenic | 35.0% | |
!!! | CTTAACCATGTTTTGGAACA+AGG | - | chr1_4:5460989-5461008 | Msa0145740:CDS | 35.0% |
AAGCTTTACACAAATTGCAC+AGG | - | chr1_4:5461043-5461062 | Msa0145740:CDS | 35.0% | |
TACACAAATTGCACAGGTAA+TGG | - | chr1_4:5461049-5461068 | Msa0145740:CDS | 35.0% | |
! | CAGGTAATGGTGAATATGAA+AGG | - | chr1_4:5461062-5461081 | Msa0145740:CDS | 35.0% |
! | GGTAATGGTGAATATGAAAG+GGG | - | chr1_4:5461064-5461083 | Msa0145740:CDS | 35.0% |
GCAATTGTCTCAAAAGAAGA+TGG | + | chr1_4:5461121-5461140 | None:intergenic | 35.0% | |
AAGAGAGGCTATTTGCTTTA+TGG | - | chr1_4:5461232-5461251 | Msa0145740:CDS | 35.0% | |
AATCACGAGTAAATCTGTTG+TGG | - | chr1_4:5461378-5461397 | Msa0145740:CDS | 35.0% | |
AAAAGAGGACAAAAATGAGG+AGG | - | chr1_4:5461471-5461490 | Msa0145740:CDS | 35.0% | |
TAAGAAAGAAGCAGAGATGA+AGG | - | chr1_4:5461939-5461958 | Msa0145740:intron | 35.0% | |
GAATGCCAATGAAAATTCCT+AGG | - | chr1_4:5462044-5462063 | Msa0145740:intron | 35.0% | |
AAATTCCTAGGCAATATTGC+TGG | - | chr1_4:5462056-5462075 | Msa0145740:intron | 35.0% | |
AATAACCAGCAATATTGCCT+AGG | + | chr1_4:5462064-5462083 | None:intergenic | 35.0% | |
TGCTAAGGTTGAAACATTGT+TGG | - | chr1_4:5462177-5462196 | Msa0145740:intron | 35.0% | |
TAAGGTTGAAACATTGTTGG+TGG | - | chr1_4:5462180-5462199 | Msa0145740:intron | 35.0% | |
TGCAGAATAGTATGGCAATA+TGG | + | chr1_4:5462355-5462374 | None:intergenic | 35.0% | |
AGATAAGATGAAATCAGACC+TGG | + | chr1_4:5462639-5462658 | None:intergenic | 35.0% | |
!! | TTTTTGTTTGGTCCTAGGAA+AGG | + | chr1_4:5462675-5462694 | None:intergenic | 35.0% |
TTTCCTAGGACCAAACAAAA+AGG | - | chr1_4:5462674-5462693 | Msa0145740:intron | 35.0% | |
!! | TTTCCTTTTTGTTTGGTCCT+AGG | + | chr1_4:5462680-5462699 | None:intergenic | 35.0% |
TTATTTGGGGGTAGGTATTA+TGG | + | chr1_4:5462728-5462747 | None:intergenic | 35.0% | |
TTGGTTTCTATCAAGAAGGT+CGG | - | chr1_4:5462861-5462880 | Msa0145740:intron | 35.0% | |
AGTTGCCATAAATTACGGAA+GGG | + | chr1_4:5462904-5462923 | None:intergenic | 35.0% | |
TAGTTGCCATAAATTACGGA+AGG | + | chr1_4:5462905-5462924 | None:intergenic | 35.0% | |
TATGGCAACTACTCTATTGT+CGG | - | chr1_4:5462914-5462933 | Msa0145740:intron | 35.0% | |
CACCAAAAAAAGTCATGAGT+CGG | - | chr1_4:5463015-5463034 | Msa0145740:intron | 35.0% | |
!!! | AACCGACTCATGACTTTTTT+TGG | + | chr1_4:5463020-5463039 | None:intergenic | 35.0% |
CACCAAAAAAAGTCATGAGT+CGG | - | chr1_4:5463015-5463034 | Msa0145740:intron | 35.0% | |
!!! | AACCGACTCATGACTTTTTT+TGG | + | chr1_4:5463020-5463039 | None:intergenic | 35.0% |
AAAACAATGGGGAGAGAAAA+AGG | - | chr1_4:5463329-5463348 | Msa0145740:intron | 35.0% | |
GTCCAAAAGTTGTCAAAAAG+TGG | - | chr1_4:5463396-5463415 | Msa0145740:intron | 35.0% | |
!!! | TCTTTTCTAAGATACACACG+TGG | - | chr1_4:5463437-5463456 | Msa0145740:intron | 35.0% |
AAGGTAGAAGTGAAATCTGA+AGG | - | chr1_4:5463563-5463582 | Msa0145740:CDS | 35.0% | |
TTGCTTCCTTGATGTTTGTT+TGG | - | chr1_4:5463634-5463653 | Msa0145740:CDS | 35.0% | |
TGCTTCCTTGATGTTTGTTT+GGG | - | chr1_4:5463635-5463654 | Msa0145740:CDS | 35.0% | |
AATAGCCCAAACAAACATCA+AGG | + | chr1_4:5463643-5463662 | None:intergenic | 35.0% | |
ATCACATTTCATGAGTTCAC+TGG | - | chr1_4:5463750-5463769 | Msa0145740:CDS | 35.0% | |
ATGGATGATCATGAAGAAGT+AGG | - | chr1_4:5463897-5463916 | Msa0145740:CDS | 35.0% | |
GAAGTAGGTGATGAATTCAA+TGG | - | chr1_4:5463912-5463931 | Msa0145740:CDS | 35.0% | |
TCAATGGAGTTAAACTTTGG+TGG | - | chr1_4:5463928-5463947 | Msa0145740:CDS | 35.0% | |
CAATGGAGTTAAACTTTGGT+GGG | - | chr1_4:5463929-5463948 | Msa0145740:CDS | 35.0% | |
AAGGATGTTCAAACACAACA+TGG | + | chr1_4:5464160-5464179 | None:intergenic | 35.0% | |
AGTTCTATGCAAGAATTGGA+AGG | - | chr1_4:5464261-5464280 | Msa0145740:CDS | 35.0% | |
GTTCTATGCAAGAATTGGAA+GGG | - | chr1_4:5464262-5464281 | Msa0145740:CDS | 35.0% | |
TATTTACTTTATGGTCCTCC+AGG | - | chr1_4:5464299-5464318 | Msa0145740:CDS | 35.0% | |
ATTTACTTTATGGTCCTCCA+GGG | - | chr1_4:5464300-5464319 | Msa0145740:CDS | 35.0% | |
ATAGCCTAACAAATTTGCCA+TGG | + | chr1_4:5464351-5464370 | None:intergenic | 35.0% | |
TCTTGAATTGACTGCTGTTA+AGG | - | chr1_4:5464382-5464401 | Msa0145740:CDS | 35.0% | |
TTAAGGATAACACTGAGTTG+AGG | - | chr1_4:5464399-5464418 | Msa0145740:CDS | 35.0% | |
AAGGATTCAAGGGAGAAAAA+AGG | - | chr1_4:5464539-5464558 | Msa0145740:CDS | 35.0% | |
GGAGAAAAAAGGTGGAATTA+TGG | - | chr1_4:5464550-5464569 | Msa0145740:CDS | 35.0% | |
GAAAAAAGGTGGAATTATGG+AGG | - | chr1_4:5464553-5464572 | Msa0145740:CDS | 35.0% | |
! | ATTTGAGGCATTCAAGATGT+TGG | - | chr1_4:5464757-5464776 | Msa0145740:CDS | 35.0% |
AATTGGCAAAAGAAGAAGCT+GGG | - | chr1_4:5464942-5464961 | Msa0145740:CDS | 35.0% | |
ATGAGTGCATGAACTTGATG+AGG | + | chr1_4:5460608-5460627 | None:intergenic | 40.0% | |
CACCTTGAAGTTTCTTTGCT+TGG | + | chr1_4:5460769-5460788 | None:intergenic | 40.0% | |
CCTTACCTTGTTCCAAAACA+TGG | + | chr1_4:5460997-5461016 | None:intergenic | 40.0% | |
!!! | CCATGTTTTGGAACAAGGTA+AGG | - | chr1_4:5460994-5461013 | Msa0145740:CDS | 40.0% |
TTGGAACAAGGTAAGGAGAT+TGG | - | chr1_4:5461001-5461020 | Msa0145740:CDS | 40.0% | |
!! | AGGAGATTGGTTTGAGTAAG+AGG | - | chr1_4:5461014-5461033 | Msa0145740:CDS | 40.0% |
AATGGTGAATATGAAAGGGG+AGG | - | chr1_4:5461067-5461086 | Msa0145740:CDS | 40.0% | |
AATATGAAAGGGGAGGTAAG+TGG | - | chr1_4:5461074-5461093 | Msa0145740:CDS | 40.0% | |
ATGCGAAAATTGGTAAGCCT+TGG | - | chr1_4:5461209-5461228 | Msa0145740:CDS | 40.0% | |
TATTTGCTTTATGGTCCTCC+TGG | - | chr1_4:5461241-5461260 | Msa0145740:CDS | 40.0% | |
! | AGTGATGATTTTCCTGTTCC+AGG | + | chr1_4:5461262-5461281 | None:intergenic | 40.0% |
GATTGTTCGCTTGATCTTAC+CGG | - | chr1_4:5461415-5461434 | Msa0145740:CDS | 40.0% | |
GGAGAATGACAGAGAAAAAG+AGG | - | chr1_4:5461456-5461475 | Msa0145740:CDS | 40.0% | |
AGCAAAGAACAAAGCAAGTC+AGG | - | chr1_4:5461543-5461562 | Msa0145740:CDS | 40.0% | |
CAAGTCAGGTAACACTTTCT+GGG | - | chr1_4:5461557-5461576 | Msa0145740:CDS | 40.0% | |
ATCTCATCCTTTGTTCGAGA+TGG | - | chr1_4:5461768-5461787 | Msa0145740:CDS | 40.0% | |
ATCCTTTGTTCGAGATGGTT+CGG | - | chr1_4:5461773-5461792 | Msa0145740:CDS | 40.0% | |
! | CATGTTAGTCTCTTCCAACA+AGG | + | chr1_4:5461800-5461819 | None:intergenic | 40.0% |
! | AAGTTTTCAGCAACATCAGC+TGG | + | chr1_4:5461826-5461845 | None:intergenic | 40.0% |
TGCTGAAAACTTGATGCCTA+AGG | - | chr1_4:5461834-5461853 | Msa0145740:CDS | 40.0% | |
ACATCTTCATCAGCTACCTT+AGG | + | chr1_4:5461853-5461872 | None:intergenic | 40.0% | |
! | ATGTTGAGGCATCATTAGAG+AGG | - | chr1_4:5461869-5461888 | Msa0145740:CDS | 40.0% |
! | ACTTAGAACCTCTAAGGAAG+AGG | - | chr1_4:5461903-5461922 | Msa0145740:intron | 40.0% |
ATGAAGGCTGAGAAAGAAGA+AGG | - | chr1_4:5461955-5461974 | Msa0145740:intron | 40.0% | |
TGAAGGCTGAGAAAGAAGAA+GGG | - | chr1_4:5461956-5461975 | Msa0145740:intron | 40.0% | |
TGAAGAGGATTCATCAGAGA+AGG | - | chr1_4:5461984-5462003 | Msa0145740:intron | 40.0% | |
TCATTGGCATTCTCTTCCTT+AGG | + | chr1_4:5462036-5462055 | None:intergenic | 40.0% | |
! | ATGCCTTTTCAACCTTTCCT+AGG | - | chr1_4:5462660-5462679 | Msa0145740:intron | 40.0% |
AGTTAAGGTTATTTGGGGGT+AGG | + | chr1_4:5462736-5462755 | None:intergenic | 40.0% | |
TGGTTTCTATCAAGAAGGTC+GGG | - | chr1_4:5462862-5462881 | Msa0145740:intron | 40.0% | |
AAAGGCCCTTCCGTAATTTA+TGG | - | chr1_4:5462896-5462915 | Msa0145740:intron | 40.0% | |
AGATACACACGTGGACAAAT+TGG | - | chr1_4:5463446-5463465 | Msa0145740:intron | 40.0% | |
GGTGACATGTTTGCTCAAAT+AGG | - | chr1_4:5463603-5463622 | Msa0145740:CDS | 40.0% | |
GGTGCTAAGGTAATTCTCTA+TGG | + | chr1_4:5463808-5463827 | None:intergenic | 40.0% | |
! | CTTTGCTTGTGTTGATGCTT+TGG | + | chr1_4:5463829-5463848 | None:intergenic | 40.0% |
ACACAAGCAAAGAGACTCAA+AGG | - | chr1_4:5463837-5463856 | Msa0145740:CDS | 40.0% | |
TCAAGCACTTGTTCTTAGCA+TGG | - | chr1_4:5463878-5463897 | Msa0145740:CDS | 40.0% | |
GGTGAGTTCTATGCAAGAAT+TGG | - | chr1_4:5464257-5464276 | Msa0145740:CDS | 40.0% | |
! | GATTGCTCACTTGATTTGAC+TGG | - | chr1_4:5464473-5464492 | Msa0145740:intron | 40.0% |
! | CACTTGATTTGACTGGTCAA+AGG | - | chr1_4:5464480-5464499 | Msa0145740:intron | 40.0% |
! | TTGATTTGACTGGTCAAAGG+AGG | - | chr1_4:5464483-5464502 | Msa0145740:intron | 40.0% |
TGGTCAAAGGAGGAAGAAAA+AGG | - | chr1_4:5464493-5464512 | Msa0145740:intron | 40.0% | |
GAGGAAGAAAAAGGAGAGAA+AGG | - | chr1_4:5464502-5464521 | Msa0145740:intron | 40.0% | |
GAAAAAGGAGAGAAAGGAAG+AGG | - | chr1_4:5464508-5464527 | Msa0145740:intron | 40.0% | |
GATTCAAGGGAGAAAAAAGG+TGG | - | chr1_4:5464542-5464561 | Msa0145740:CDS | 40.0% | |
GGAATTATGGAGGAAAGAGA+TGG | - | chr1_4:5464563-5464582 | Msa0145740:CDS | 40.0% | |
!! | GATCCTGCATTGGTTAGAAA+AGG | - | chr1_4:5464698-5464717 | Msa0145740:CDS | 40.0% |
! | CTACCTTTTCTAACCAATGC+AGG | + | chr1_4:5464704-5464723 | None:intergenic | 40.0% |
GAATTGGCAAAAGAAGAAGC+TGG | - | chr1_4:5464941-5464960 | Msa0145740:CDS | 40.0% | |
ATTGGCAAAAGAAGAAGCTG+GGG | - | chr1_4:5464943-5464962 | Msa0145740:CDS | 40.0% | |
GACTGCGATGAAATGTGAGA+AGG | + | chr1_4:5460943-5460962 | None:intergenic | 45.0% | |
ATTGGTAAGCCTTGGAAGAG+AGG | - | chr1_4:5461217-5461236 | Msa0145740:CDS | 45.0% | |
AGCAAATAGCCTCTCTTCCA+AGG | + | chr1_4:5461229-5461248 | None:intergenic | 45.0% | |
! | GATGATTTTCCTGTTCCAGG+AGG | + | chr1_4:5461259-5461278 | None:intergenic | 45.0% |
GCAAGTCAGGTAACACTTTC+TGG | - | chr1_4:5461556-5461575 | Msa0145740:CDS | 45.0% | |
! | GATCAAGCTTTGATTCGTCG+TGG | - | chr1_4:5461664-5461683 | Msa0145740:CDS | 45.0% |
! | TTTGATTCGTCGTGGACGAA+TGG | - | chr1_4:5461672-5461691 | Msa0145740:CDS | 45.0% |
GGTAGCTGATGAAGATGTTG+AGG | - | chr1_4:5461855-5461874 | Msa0145740:CDS | 45.0% | |
!! | CCTTAGAGGTTCTAAGTGCT+TGG | + | chr1_4:5461900-5461919 | None:intergenic | 45.0% |
CCAAGCACTTAGAACCTCTA+AGG | - | chr1_4:5461897-5461916 | Msa0145740:intron | 45.0% | |
AGAGGATTCATCAGAGAAGG+AGG | - | chr1_4:5461987-5462006 | Msa0145740:intron | 45.0% | |
TGCAGAAGACAAGAAGCCTA+AGG | - | chr1_4:5462017-5462036 | Msa0145740:intron | 45.0% | |
GTTACACATCTATCCTCCTC+AGG | - | chr1_4:5462474-5462493 | Msa0145740:intron | 45.0% | |
GGTCCTAGGAAAGGTTGAAA+AGG | + | chr1_4:5462666-5462685 | None:intergenic | 45.0% | |
ATAGACACTCGAACGTAGAG+AGG | - | chr1_4:5462820-5462839 | Msa0145740:intron | 45.0% | |
GGTTTCTATCAAGAAGGTCG+GGG | - | chr1_4:5462863-5462882 | Msa0145740:intron | 45.0% | |
GGAGAGAAAAAGGAAGAGAG+AGG | - | chr1_4:5463339-5463358 | Msa0145740:intron | 45.0% | |
!! | GTGTTGATGCTTTGGTGCTA+AGG | + | chr1_4:5463821-5463840 | None:intergenic | 45.0% |
!! | GTTAAACTTTGGTGGGCTAG+TGG | - | chr1_4:5463936-5463955 | Msa0145740:CDS | 45.0% |
ATGCAAGAATTGGAAGGGCT+TGG | - | chr1_4:5464267-5464286 | Msa0145740:CDS | 45.0% | |
ATTGGAAGGGCTTGGAAAAG+AGG | - | chr1_4:5464275-5464294 | Msa0145740:CDS | 45.0% | |
!! | ATTGTTGACTTTCCAGTCCC+TGG | + | chr1_4:5464320-5464339 | None:intergenic | 45.0% |
GTCAACAATGATTGCTGCCA+TGG | - | chr1_4:5464331-5464350 | Msa0145740:CDS | 45.0% | |
! | GCTGCCATGGCAAATTTGTT+AGG | - | chr1_4:5464344-5464363 | Msa0145740:CDS | 45.0% |
AAAGGAGAGAAAGGAAGAGG+AGG | - | chr1_4:5464511-5464530 | Msa0145740:intron | 45.0% | |
AAAGGAAGAGGAGGAAGAGA+AGG | - | chr1_4:5464520-5464539 | Msa0145740:CDS | 45.0% | |
AGGAGGAAGAGAAGGATTCA+AGG | - | chr1_4:5464528-5464547 | Msa0145740:CDS | 45.0% | |
GGAGGAAGAGAAGGATTCAA+GGG | - | chr1_4:5464529-5464548 | Msa0145740:CDS | 45.0% | |
!! | GATGGATTATGGTCTGCATG+TGG | - | chr1_4:5464629-5464648 | Msa0145740:CDS | 45.0% |
GGAGAAATTGGATCCTGCAT+TGG | - | chr1_4:5464688-5464707 | Msa0145740:CDS | 45.0% | |
AAATGCTCAGCAACATCAGC+TGG | + | chr1_4:5464860-5464879 | None:intergenic | 45.0% | |
TTGATGCCAAAGACTGCTTC+TGG | - | chr1_4:5464878-5464897 | Msa0145740:CDS | 45.0% | |
!!! | ATAATAATATTTTAATACTT+AGG | + | chr1_4:5462432-5462451 | None:intergenic | 5.0% |
!!! | CTTTTATTATTAAAAAAAAA+TGG | + | chr1_4:5462616-5462635 | None:intergenic | 5.0% |
CTTTATGGTCCTCCTGGAAC+AGG | - | chr1_4:5461247-5461266 | Msa0145740:CDS | 50.0% | |
CGAATCTGTCTTCCTCTGAC+CGG | + | chr1_4:5461437-5461456 | None:intergenic | 50.0% | |
CGGTCAGAGGAAGACAGATT+CGG | - | chr1_4:5461435-5461454 | Msa0145740:CDS | 50.0% | |
! | GGGATTTGGTCTGCTAGTAC+TGG | - | chr1_4:5461598-5461617 | Msa0145740:CDS | 50.0% |
GACCGAACCATCTCGAACAA+AGG | + | chr1_4:5461778-5461797 | None:intergenic | 50.0% | |
CATCTCAGCCTCTTCCTTAG+AGG | + | chr1_4:5461914-5461933 | None:intergenic | 50.0% | |
GCTGAGAAAGAAGAAGGGAC+AGG | - | chr1_4:5461961-5461980 | Msa0145740:intron | 50.0% | |
AGAAGAAGGGACAGGTGAAG+AGG | - | chr1_4:5461969-5461988 | Msa0145740:intron | 50.0% | |
GTCGGAGACGTAGACACAAT+CGG | - | chr1_4:5462932-5462951 | Msa0145740:intron | 50.0% | |
GGATTATGGTCTGCATGTGG+AGG | - | chr1_4:5464632-5464651 | Msa0145740:CDS | 50.0% | |
GCATCACCAGAAGCAGTCTT+TGG | + | chr1_4:5464887-5464906 | None:intergenic | 50.0% | |
AGAAGCTGGGGTGAAATCAG+TGG | - | chr1_4:5464955-5464974 | Msa0145740:CDS | 50.0% | |
CGCTTGATCTTACCGGTCAG+AGG | - | chr1_4:5461422-5461441 | Msa0145740:CDS | 55.0% | |
! | AGTTGCTGCTGCTTCTCTGC+AGG | - | chr1_4:5461501-5461520 | Msa0145740:CDS | 55.0% |
! | GTTGCTGCTGCTTCTCTGCA+GGG | - | chr1_4:5461502-5461521 | Msa0145740:CDS | 55.0% |
!! | CGAGATGGTTCGGTCCTTGT+TGG | - | chr1_4:5461783-5461802 | Msa0145740:CDS | 55.0% |
CACTCGAACGTAGAGAGGAG+TGG | - | chr1_4:5462825-5462844 | Msa0145740:intron | 55.0% | |
GAGTGGAGCGAGCGTATTCT+TGG | - | chr1_4:5462842-5462861 | Msa0145740:intron | 55.0% | |
CTATCAAGAAGGTCGGGGTG+TGG | - | chr1_4:5462868-5462887 | Msa0145740:intron | 55.0% | |
CTTTATGGTCCTCCAGGGAC+TGG | - | chr1_4:5464305-5464324 | Msa0145740:CDS | 55.0% | |
! | GTTGACTTTCCAGTCCCTGG+AGG | + | chr1_4:5464317-5464336 | None:intergenic | 55.0% |
TCAAGAAGGTCGGGGTGTGG+CGG | - | chr1_4:5462871-5462890 | Msa0145740:intron | 60.0% | |
CAAGAAGGTCGGGGTGTGGC+GGG | - | chr1_4:5462872-5462891 | Msa0145740:intron | 65.0% | |
!! | GGTCGGGGTGTGGCGGGCAA+AGG | - | chr1_4:5462878-5462897 | Msa0145740:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 5460527 | 5464997 | 5460527 | ID=Msa0145740;Name=Msa0145740 |
chr1_4 | mRNA | 5460527 | 5464997 | 5460527 | ID=Msa0145740-mRNA-1;Parent=Msa0145740;Name=Msa0145740-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|0|0|8|0|865 |
chr1_4 | exon | 5464854 | 5464997 | 5464854 | ID=Msa0145740-mRNA-1:exon:2301;Parent=Msa0145740-mRNA-1 |
chr1_4 | exon | 5464668 | 5464847 | 5464668 | ID=Msa0145740-mRNA-1:exon:2300;Parent=Msa0145740-mRNA-1 |
chr1_4 | exon | 5464514 | 5464661 | 5464514 | ID=Msa0145740-mRNA-1:exon:2299;Parent=Msa0145740-mRNA-1 |
chr1_4 | exon | 5464242 | 5464459 | 5464242 | ID=Msa0145740-mRNA-1:exon:2298;Parent=Msa0145740-mRNA-1 |
chr1_4 | exon | 5464032 | 5464214 | 5464032 | ID=Msa0145740-mRNA-1:exon:2297;Parent=Msa0145740-mRNA-1 |
chr1_4 | exon | 5463735 | 5463959 | 5463735 | ID=Msa0145740-mRNA-1:exon:2296;Parent=Msa0145740-mRNA-1 |
chr1_4 | exon | 5463542 | 5463668 | 5463542 | ID=Msa0145740-mRNA-1:exon:2295;Parent=Msa0145740-mRNA-1 |
chr1_4 | exon | 5460527 | 5461899 | 5460527 | ID=Msa0145740-mRNA-1:exon:2294;Parent=Msa0145740-mRNA-1 |
chr1_4 | CDS | 5464854 | 5464997 | 5464854 | ID=Msa0145740-mRNA-1:cds;Parent=Msa0145740-mRNA-1 |
chr1_4 | CDS | 5464668 | 5464847 | 5464668 | ID=Msa0145740-mRNA-1:cds;Parent=Msa0145740-mRNA-1 |
chr1_4 | CDS | 5464514 | 5464661 | 5464514 | ID=Msa0145740-mRNA-1:cds;Parent=Msa0145740-mRNA-1 |
chr1_4 | CDS | 5464242 | 5464459 | 5464242 | ID=Msa0145740-mRNA-1:cds;Parent=Msa0145740-mRNA-1 |
chr1_4 | CDS | 5464032 | 5464214 | 5464032 | ID=Msa0145740-mRNA-1:cds;Parent=Msa0145740-mRNA-1 |
chr1_4 | CDS | 5463735 | 5463959 | 5463735 | ID=Msa0145740-mRNA-1:cds;Parent=Msa0145740-mRNA-1 |
chr1_4 | CDS | 5463542 | 5463668 | 5463542 | ID=Msa0145740-mRNA-1:cds;Parent=Msa0145740-mRNA-1 |
chr1_4 | CDS | 5460527 | 5461899 | 5460527 | ID=Msa0145740-mRNA-1:cds;Parent=Msa0145740-mRNA-1 |
Gene Sequence |
Protein sequence |