AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0665170


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0665170 MtrunA17_Chr4g0003291 74.627 335 48 7 12 318 24 349 2.88e-142 417
Msa0665170 MtrunA17_Chr4g0003291 60.383 366 35 6 343 605 3 361 2.42e-118 356
Msa0665170 MtrunA17_Chr4g0063941 56.198 121 47 3 327 446 22 137 3.42e-32 127
Msa0665170 MtrunA17_Chr4g0063941 57.500 80 32 2 12 90 59 137 3.97e-18 86.7
Msa0665170 MtrunA17_Chr4g0063971 64.835 91 28 2 327 417 22 108 1.76e-30 122
Msa0665170 MtrunA17_Chr4g0063971 57.407 54 19 2 12 65 59 108 4.32e-11 64.7
Msa0665170 MtrunA17_Chr6g0476211 47.183 142 58 7 304 443 6 132 1.00e-26 105
Msa0665170 MtrunA17_Chr6g0476211 44.578 83 38 3 12 87 58 139 1.53e-11 62.4
Msa0665170 MtrunA17_Chr6g0476191 44.099 161 69 8 304 458 6 151 1.30e-26 106
Msa0665170 MtrunA17_Chr6g0476191 47.500 80 34 3 12 84 58 136 5.69e-12 64.7
Msa0665170 MtrunA17_Chr6g0476221 47.183 142 58 7 304 443 6 132 6.08e-26 104
Msa0665170 MtrunA17_Chr6g0476221 47.500 80 34 3 12 84 58 136 1.37e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0665170 AT3G15790.1 38.321 274 125 9 327 587 6 248 3.04e-35 134
Msa0665170 AT3G15790.1 57.971 69 27 2 12 79 43 110 1.49e-14 74.3
Msa0665170 AT3G15790.3 38.321 274 125 9 327 587 6 248 3.04e-35 134
Msa0665170 AT3G15790.3 57.971 69 27 2 12 79 43 110 1.49e-14 74.3
Msa0665170 AT3G15790.2 38.321 274 125 9 327 587 6 248 3.04e-35 134
Msa0665170 AT3G15790.2 57.971 69 27 2 12 79 43 110 1.49e-14 74.3
Msa0665170 AT1G15340.1 61.458 96 37 0 322 417 1 96 2.71e-34 135
Msa0665170 AT1G15340.1 52.941 68 31 1 12 79 43 109 7.74e-13 71.2
Msa0665170 AT1G15340.2 65.455 55 19 0 322 376 1 55 2.54e-19 90.1

Find 135 sgRNAs with CRISPR-Local

Find 715 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGTGTTCCTTTCTTCTT+AGG 0.082097 4_4:+4556174 None:intergenic
TTCAACTGGTTCTTCCTCTT+TGG 0.164665 4_4:+4555492 None:intergenic
GTACTTCTTCAATTGTCTTT+TGG 0.222954 4_4:+4556104 None:intergenic
TCAACTGGTTCTTCCTCTTT+GGG 0.249140 4_4:+4555493 None:intergenic
TGCAGGTGGTGGGGTTGTTT+TGG 0.254402 4_4:+4555990 None:intergenic
AAAATGATCTCAGGCTTTCT+TGG 0.278919 4_4:+4563040 None:intergenic
TTGATCATGAAAGTGTTATT+TGG 0.279680 4_4:-4555288 Msa0665170:CDS
AGAAAATAGTAAAGCTGAAT+TGG 0.281852 4_4:-4555602 Msa0665170:CDS
TGTCGCTGAAAAGCCGTTAT+TGG 0.305300 4_4:-4562387 Msa0665170:CDS
GATTCCCAGAATGGTTATTC+AGG 0.307877 4_4:+4556082 None:intergenic
TGCGGGTGGTGGGGTTGTTT+TGG 0.312325 4_4:+4562874 None:intergenic
GGCTCAGCTTGTGCGGGTGG+TGG 0.318363 4_4:+4562863 None:intergenic
CAAGGCGATCAACAAGGATT+AGG 0.320479 4_4:-4562904 Msa0665170:CDS
ATTGACTTGGGAAAAGAAAA+TGG 0.320728 4_4:-4562131 Msa0665170:CDS
TGAGTTGGAAACAGCTGAAT+TGG 0.322866 4_4:-4562258 Msa0665170:CDS
AAGTACCTGAATAACCATTC+TGG 0.324491 4_4:-4556087 Msa0665170:CDS
AGAAATATCGATGGCGGAAC+CGG 0.325360 4_4:-4555704 Msa0665170:CDS
TCAGAGGAAGCCAAGGAAAA+AGG 0.326439 4_4:-4555886 Msa0665170:intron
GCTCAGCTTGTGCAGGTGGT+GGG 0.331053 4_4:+4555980 None:intergenic
GCTCAGCTTGTGCGGGTGGT+GGG 0.332288 4_4:+4562864 None:intergenic
CTGACATATCAGAGTTTGAT+TGG 0.338629 4_4:-4556059 Msa0665170:CDS
CTGACATATCAGAGTTTGAT+TGG 0.338629 4_4:-4562943 Msa0665170:CDS
AAGTACCTGAATCAACATTC+TGG 0.339044 4_4:-4562971 Msa0665170:CDS
GATTCCCAGAATGTTGATTC+AGG 0.339175 4_4:+4562966 None:intergenic
AATGTTGAAGATATCATTAA+TGG 0.339503 4_4:-4555379 Msa0665170:CDS
AGAGGAAGAACCAGTTGAAT+TGG 0.351346 4_4:-4555488 Msa0665170:CDS
GTTGAATTGGAAAAGGAAAA+TGG 0.358117 4_4:-4555475 Msa0665170:CDS
GGCTCAGCTTGTGCAGGTGG+TGG 0.361451 4_4:+4555979 None:intergenic
TGATGATCGCCTTGGTGTCT+TGG 0.372239 4_4:+4556029 None:intergenic
TCAGAGTTTGATTGGGGAAC+CGG 0.377737 4_4:-4562935 Msa0665170:CDS
TTGTTGATCGCCTTGGCGTC+TGG 0.382942 4_4:+4562912 None:intergenic
AAATACCAGTTTCTTCCAAT+TGG 0.388944 4_4:+4557923 None:intergenic
AACTCTCTGCTCCTTCCAAT+TGG 0.391579 4_4:-4557938 Msa0665170:CDS
ATCCTCAGGATCGGCATCAC+TGG 0.396020 4_4:+4562715 None:intergenic
TTCGGAGGCTCAGCTTGTGC+AGG 0.403009 4_4:+4555973 None:intergenic
AGAAATATCGATGGAGGAAC+CGG 0.404884 4_4:-4562348 Msa0665170:CDS
CTAATCCTTGTTGATCGCCT+TGG 0.406118 4_4:+4562905 None:intergenic
GATGAAAAGCAAACAATTCA+AGG 0.406252 4_4:-4555334 Msa0665170:CDS
TCCTTCCAATTGGAAGAAAC+TGG 0.411901 4_4:-4557928 Msa0665170:intron
TGTCGCTGAAGAACCGCAAT+TGG 0.417997 4_4:-4562483 Msa0665170:CDS
TTCAGATGAGGCCAAGGAAA+AGG 0.428466 4_4:-4562771 Msa0665170:CDS
TTGGTGTTCCTTTCTTCTTA+GGG 0.429693 4_4:+4556175 None:intergenic
TCAGCTGTTTCCAACTCAAC+TGG 0.430984 4_4:+4562263 None:intergenic
AAGGCGATCAACAAGGATTA+GGG 0.431961 4_4:-4562903 Msa0665170:CDS
TGTCACTGAAAAGCCGCAAT+TGG 0.432666 4_4:-4555743 Msa0665170:CDS
TGACATATCAGAGTTTGATT+GGG 0.437668 4_4:-4556058 Msa0665170:CDS
TGACATATCAGAGTTTGATT+GGG 0.437668 4_4:-4562942 Msa0665170:CDS
AGTTATAAGCAGGAGAAATC+AGG 0.438320 4_4:-4562095 Msa0665170:CDS
CTCAGCTTGTGCAGGTGGTG+GGG 0.439388 4_4:+4555981 None:intergenic
TTACTTTGCTTAATATCCTC+AGG 0.440569 4_4:+4562701 None:intergenic
TCAAGTGGAAGAAACATCTT+TGG 0.446845 4_4:-4562228 Msa0665170:CDS
TTCGGAGGCTCAGCTTGTGC+GGG 0.449654 4_4:+4562857 None:intergenic
GAACTTATCTCTTCTCCAGT+TGG 0.457485 4_4:+4556126 None:intergenic
TGATGAACAAGTGAAGAAAA+TGG 0.458019 4_4:-4555311 Msa0665170:CDS
CTCAGCTTGTGCGGGTGGTG+GGG 0.458566 4_4:+4562865 None:intergenic
AGTACCTGAATAACCATTCT+GGG 0.461208 4_4:-4556086 Msa0665170:CDS
ATCGATGTTTCTTCGACTTG+AGG 0.464547 4_4:+4562647 None:intergenic
TCCACAGAAAGTTGCTCCAC+AGG 0.466049 4_4:+4562200 None:intergenic
ATTGACGTTATCAGCATCAC+TGG 0.483149 4_4:+4555831 None:intergenic
CAATCAAACTCTGATATGTC+AGG 0.483410 4_4:+4556060 None:intergenic
CAATCAAACTCTGATATGTC+AGG 0.483410 4_4:+4562944 None:intergenic
ACCAGTTTCTTCCAATTGGA+AGG 0.486997 4_4:+4557927 None:intergenic
AAACGTAGTAGGAAATCATC+TGG 0.488320 4_4:-4562833 Msa0665170:CDS
AGTTACAAGCAGGAGAAATC+CGG 0.493425 4_4:-4555439 Msa0665170:CDS
AGACACTTCCATGACTGAAC+CGG 0.495536 4_4:-4562540 Msa0665170:intron
GGAGCAACGAAAACGATCTC+AGG 0.499081 4_4:+4556147 None:intergenic
AGTACCTGAATCAACATTCT+GGG 0.500963 4_4:-4562970 Msa0665170:CDS
ATCAATGTGTCTTCCACTTG+AGG 0.501014 4_4:+4562455 None:intergenic
TGATCGCCTTGGCGTCTGGC+CGG 0.502724 4_4:+4562916 None:intergenic
TCAGATGAGGCCAAGGAAAA+GGG 0.503014 4_4:-4562770 Msa0665170:intron
AGAACCAGTTGAATTGGAAA+AGG 0.503470 4_4:-4555482 Msa0665170:CDS
CTAATCCTTGATGATCGCCT+TGG 0.506450 4_4:+4556021 None:intergenic
TCAAGTGGAAGACACATTGA+TGG 0.512690 4_4:-4562453 Msa0665170:CDS
TCCACAGAAAGTTGTTCCAC+CGG 0.516693 4_4:+4555544 None:intergenic
GAAATCATCTGGTTCAAAGA+AGG 0.517949 4_4:-4562822 Msa0665170:CDS
CAGTTCTTCCCTAAGAAGAA+AGG 0.518232 4_4:-4556183 Msa0665170:CDS
AACTGATATCAGTTATAAGC+AGG 0.520313 4_4:-4562105 Msa0665170:CDS
GCCGTTATTGGAAAATCCTC+AGG 0.520462 4_4:-4562375 Msa0665170:CDS
AAAGATGTTTCTTCCACTTG+AGG 0.521665 4_4:+4562230 None:intergenic
AGGGGAGGCACCAGTTGAGT+TGG 0.522143 4_4:-4555629 Msa0665170:CDS
TTTCGGAGGCTCAGCTTGTG+CGG 0.523698 4_4:+4562856 None:intergenic
AGGGGAGGCACCAGTTGAGT+TGG 0.527077 4_4:-4562273 Msa0665170:intron
AGAAACATCTGTGGTTGAAC+CGG 0.528424 4_4:-4555563 Msa0665170:CDS
TTGCTTAATATCCTCAGGAT+CGG 0.529363 4_4:+4562706 None:intergenic
AGCTGATAGCAGTTACAAGC+AGG 0.530507 4_4:-4555449 Msa0665170:CDS
GGAGGCTCAGCTTGTGCGGG+TGG 0.531450 4_4:+4562860 None:intergenic
TCCTCAGGATCGGCATCACT+GGG 0.532873 4_4:+4562716 None:intergenic
AAAGGAAGCACCAATTGACT+TGG 0.534933 4_4:-4562144 Msa0665170:CDS
ATCGATATTTCTTCCACCTG+AGG 0.541010 4_4:+4562359 None:intergenic
TTGTTTCACCGGTTCAGTCA+TGG 0.543208 4_4:+4562532 None:intergenic
GGAGCAACGAAAATGATCTC+AGG 0.543335 4_4:+4563031 None:intergenic
ATATGTCAGGATTCCCAGAA+TGG 0.543833 4_4:+4556073 None:intergenic
ATCTCCTTCAGATGAGGCCA+AGG 0.544148 4_4:-4562777 Msa0665170:CDS
ATGGAAGTGTCTTCCACTTG+AGG 0.544743 4_4:+4562551 None:intergenic
GGAGGCTCAGCTTGTGCAGG+TGG 0.548233 4_4:+4555976 None:intergenic
ACCTGTGGAGCAACTTTCTG+TGG 0.549481 4_4:-4562201 Msa0665170:CDS
TGATCGCCTTGGTGTCTTGG+CGG 0.550753 4_4:+4556032 None:intergenic
AACTCCTTCAGAGGAAGCCA+AGG 0.553718 4_4:-4555893 Msa0665170:intron
ACCGGTGGAACAACTTTCTG+TGG 0.554252 4_4:-4555545 Msa0665170:CDS
GGGGAACCGGCCAGACGCCA+AGG 0.558694 4_4:-4562922 Msa0665170:CDS
GGTAATTAAACAAAGTAATG+TGG 0.560022 4_4:-4555782 Msa0665170:CDS
ACAGATGTTTCTTCCACTTG+AGG 0.562567 4_4:+4555574 None:intergenic
AACATCTTTGGCAGAACCTG+TGG 0.568288 4_4:-4562216 Msa0665170:CDS
GCATCTGGAAAAGCCTCAAG+TGG 0.577519 4_4:-4562564 Msa0665170:CDS
AGACACCAAGGCGATCATCA+AGG 0.580522 4_4:-4556026 Msa0665170:CDS
GGATATTAAGCAAAGTAATG+TGG 0.590242 4_4:-4562696 Msa0665170:CDS
AACATCTGTGGTTGAACCGG+TGG 0.593055 4_4:-4555560 Msa0665170:CDS
ATTAAGCAAAGTAATGTGGA+AGG 0.597226 4_4:-4562692 Msa0665170:CDS
AAGGAAGCACCAATTGACTT+GGG 0.598374 4_4:-4562143 Msa0665170:CDS
GACATATCAGAGTTTGATTG+GGG 0.603872 4_4:-4556057 Msa0665170:CDS
GACATATCAGAGTTTGATTG+GGG 0.603872 4_4:-4562941 Msa0665170:CDS
TTTCGACTACGTTTCTTCGG+AGG 0.606353 4_4:+4555958 None:intergenic
AACTGAATCTCCTTCAGATG+AGG 0.612177 4_4:-4562783 Msa0665170:CDS
TCAGGCGCAGAGGAAAGAGA+AGG 0.616956 4_4:-4562077 Msa0665170:CDS
GCAGGAGAAATCCGGCGCAG+AGG 0.617471 4_4:-4555431 Msa0665170:CDS
GCAATTGGAAAAGCATCAAG+TGG 0.623475 4_4:-4555728 Msa0665170:CDS
TCCCAGTGATGCCGATCCTG+AGG 0.631463 4_4:-4562717 Msa0665170:CDS
GCAATTGGAAAATCCTCAAG+TGG 0.631644 4_4:-4562468 Msa0665170:CDS
AGACGCCAAGGCGATCAACA+AGG 0.633848 4_4:-4562910 Msa0665170:CDS
GCAGGAGAAATCAGGCGCAG+AGG 0.634652 4_4:-4562087 Msa0665170:CDS
TCAGGTGGAAGAAATATCGA+TGG 0.640407 4_4:-4562357 Msa0665170:CDS
TGAATTGGAAAAGCCTCAAG+TGG 0.640871 4_4:-4555587 Msa0665170:CDS
TGAATTGGAAAAGCCTCAAG+TGG 0.640871 4_4:-4562243 Msa0665170:CDS
AATAAAGATTGACGATGCAG+AGG 0.649259 4_4:-4555803 Msa0665170:CDS
GGTGGAAGAAATATCGATGG+AGG 0.661877 4_4:-4562354 Msa0665170:CDS
TAGGTTCCAAAAGACAATTG+AGG 0.662321 4_4:-4562994 Msa0665170:intron
TGGTTCAAAGAAGGATGACA+AGG 0.662397 4_4:-4562813 Msa0665170:CDS
TCAAGTCGAAGAAACATCGA+TGG 0.666143 4_4:-4562645 Msa0665170:CDS
GGGGAACCGCCAAGACACCA+AGG 0.669363 4_4:-4556038 Msa0665170:CDS
TCAAGTGGAAGAAATATCGA+TGG 0.670883 4_4:-4555713 Msa0665170:CDS
GTTATTGGAAAATCCTCAGG+TGG 0.675506 4_4:-4562372 Msa0665170:CDS
TTGACGTTATCAGCATCACT+GGG 0.676786 4_4:+4555832 None:intergenic
AGTGGAAGAAATATCGATGG+CGG 0.684152 4_4:-4555710 Msa0665170:CDS
TCAAGTGGAAGAAACATCTG+TGG 0.701625 4_4:-4555572 Msa0665170:CDS
TCCGGCGCAGAGGAAAACGA+AGG 0.703991 4_4:-4555421 Msa0665170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAAATTAAAATATTTTGAT+TGG - chr4_4:4556185-4556204 Msa0665170:intron 10.0%
!! ATATTATAGTATATTACATA+AGG + chr4_4:4556537-4556556 None:intergenic 10.0%
!!! AATATGAATATTTATGATTT+TGG - chr4_4:4556552-4556571 Msa0665170:intron 10.0%
!!! ATATGAATATTTATGATTTT+GGG - chr4_4:4556553-4556572 Msa0665170:intron 10.0%
!!! TTTTTTAATGTATTCTATTT+TGG + chr4_4:4556835-4556854 None:intergenic 10.0%
!!! TAATTGTTTTTTAATGTATT+TGG + chr4_4:4556874-4556893 None:intergenic 10.0%
!! TCTTATAATAAAAAAACAAA+CGG - chr4_4:4556974-4556993 Msa0665170:intron 10.0%
!!! TTTTTTATTTTTTGTTTTTG+TGG - chr4_4:4558251-4558270 Msa0665170:intron 10.0%
!!! TTTTTATTTTTTGTTTTTGT+GGG - chr4_4:4558252-4558271 Msa0665170:intron 10.0%
!!! CAAAAAATTTAATTTTTTGT+TGG - chr4_4:4561606-4561625 Msa0665170:intron 10.0%
!!! TAATTAACTTTTTTTTTTGA+AGG - chr4_4:4564730-4564749 Msa0665170:intron 10.0%
!!! TTTTTTATTTTTTGTTTTTG+TGG - chr4_4:4558251-4558270 Msa0665170:intron 10.0%
!!! TTTTTATTTTTTGTTTTTGT+GGG - chr4_4:4558252-4558271 Msa0665170:intron 10.0%
!! TTTACATATAAACTCTATAA+AGG - chr4_4:4556300-4556319 Msa0665170:intron 15.0%
!! TAAATAATAAATGAATTGAC+TGG - chr4_4:4556916-4556935 Msa0665170:intron 15.0%
!! GATCAAATCAAATTAAAAAA+AGG - chr4_4:4556998-4557017 Msa0665170:intron 15.0%
!!! AAATTAAAAAAAGGTACAAA+CGG - chr4_4:4557007-4557026 Msa0665170:intron 15.0%
!! ATACAATTAAAAAAAATGGA+GGG + chr4_4:4557427-4557446 None:intergenic 15.0%
!! AATACAATTAAAAAAAATGG+AGG + chr4_4:4557428-4557447 None:intergenic 15.0%
!! CATATCATAAATAATAATCA+AGG + chr4_4:4557631-4557650 None:intergenic 15.0%
!!! TTTTGATGTTTTTGTTTTTT+TGG - chr4_4:4558199-4558218 Msa0665170:intron 15.0%
!!! TTTGATGTTTTTGTTTTTTT+GGG - chr4_4:4558200-4558219 Msa0665170:intron 15.0%
!! TTACAAATAAGAATTCATTT+CGG + chr4_4:4558613-4558632 None:intergenic 15.0%
!!! CTTCATAATGTTATAAATTT+TGG - chr4_4:4558712-4558731 Msa0665170:intron 15.0%
!!! TTTTATCAAAAACTTAAGTT+TGG - chr4_4:4560891-4560910 Msa0665170:intron 15.0%
!! ATTATTACAATTCTTCATAA+AGG + chr4_4:4561103-4561122 None:intergenic 15.0%
!! AAGATATAACTATATAAGAT+AGG + chr4_4:4561322-4561341 None:intergenic 15.0%
!! AAAAAAAGTTTACATATTAC+AGG - chr4_4:4561550-4561569 Msa0665170:intron 15.0%
!! AAAAATAAACGAAAAAAGAA+TGG + chr4_4:4562152-4562171 None:intergenic 15.0%
!!! ACTTGATAATTTCTAATAAA+TGG - chr4_4:4562387-4562406 Msa0665170:CDS 15.0%
!!! CTTGATAATTTCTAATAAAT+GGG - chr4_4:4562388-4562407 Msa0665170:CDS 15.0%
!! AGTTATGAAAATTAATAGAT+GGG + chr4_4:4562430-4562449 None:intergenic 15.0%
!! TATAAAAGATTAAAAGAACA+CGG + chr4_4:4562472-4562491 None:intergenic 15.0%
!!! CATTTTGATATTCAAATTAA+AGG - chr4_4:4562858-4562877 Msa0665170:CDS 15.0%
!!! GTAAAATGTTTATGTTTTTT+TGG - chr4_4:4563768-4563787 Msa0665170:intron 15.0%
!! ACTATTTGTAATATGTTTAT+TGG - chr4_4:4563794-4563813 Msa0665170:intron 15.0%
!!! TTCAATTGTTCATATTTTAT+AGG - chr4_4:4564149-4564168 Msa0665170:intron 15.0%
!!! TCAATTGTTCATATTTTATA+GGG - chr4_4:4564150-4564169 Msa0665170:intron 15.0%
!! AAATCACATAAAAAAAATCA+AGG + chr4_4:4564401-4564420 None:intergenic 15.0%
!! AAGCTAATAAAAAAAATCAA+AGG + chr4_4:4564426-4564445 None:intergenic 15.0%
!!! ATTCAATTGTTCATTTTTTT+AGG - chr4_4:4564605-4564624 Msa0665170:intron 15.0%
!!! TTCAATTGTTCATTTTTTTA+GGG - chr4_4:4564606-4564625 Msa0665170:intron 15.0%
!!! ATTTTGAAGTTTTTGTTTTT+TGG - chr4_4:4565135-4565154 Msa0665170:intron 15.0%
!!! TTTTGAAGTTTTTGTTTTTT+GGG - chr4_4:4565136-4565155 Msa0665170:intron 15.0%
!!! ATTGTTTTATAACGTATTTT+TGG - chr4_4:4565933-4565952 Msa0665170:intron 15.0%
!! TATTTATCATATGCATTCTT+TGG - chr4_4:4555453-4555472 Msa0665170:CDS 20.0%
!! TCACTTCTCATTATTTAAAT+GGG + chr4_4:4555521-4555540 None:intergenic 20.0%
!! TTCACTTCTCATTATTTAAA+TGG + chr4_4:4555522-4555541 None:intergenic 20.0%
!! TGTTTGTTTGTTTATAACAA+TGG - chr4_4:4556062-4556081 Msa0665170:CDS 20.0%
!! GTAAAAAAAACTCTTTGTAA+TGG - chr4_4:4556404-4556423 Msa0665170:intron 20.0%
!! TCGATCAAATTAATACAAAT+AGG + chr4_4:4556440-4556459 None:intergenic 20.0%
!!! ATATTTTTGTTTGTTGAGTT+AGG - chr4_4:4556493-4556512 Msa0665170:intron 20.0%
!! AAAGTAAATTGATTAGTGTT+TGG + chr4_4:4556743-4556762 None:intergenic 20.0%
!!! AGAAAATTTAATTTCGAATC+CGG + chr4_4:4557096-4557115 None:intergenic 20.0%
!! TTAGATAGAAACAACAAATT+AGG + chr4_4:4557160-4557179 None:intergenic 20.0%
!! AAGCTAATAATCAAAAATCA+AGG + chr4_4:4557540-4557559 None:intergenic 20.0%
!!! ATTATTGTTATTTGTTACTG+TGG - chr4_4:4557775-4557794 Msa0665170:intron 20.0%
!! AAGAATTTAGTTGTAGATAT+TGG - chr4_4:4557860-4557879 Msa0665170:intron 20.0%
!! TTCTTGAAATTACTTAAGTT+AGG - chr4_4:4558175-4558194 Msa0665170:intron 20.0%
!! AAACAAATCAAAACTTTACA+AGG + chr4_4:4558234-4558253 None:intergenic 20.0%
!!! TTGATAATGAAAGTGTTATT+TGG - chr4_4:4560205-4560224 Msa0665170:intron 20.0%
!!! TTTTTTTTTTTTGCAAAGCT+TGG - chr4_4:4560286-4560305 Msa0665170:intron 20.0%
!!! TGTTTTCTGTTTTTAACATT+TGG - chr4_4:4560420-4560439 Msa0665170:intron 20.0%
!!! GTTTTCTGTTTTTAACATTT+GGG - chr4_4:4560421-4560440 Msa0665170:intron 20.0%
!!! CATTGCTCTTTTTTTAATTT+TGG - chr4_4:4560771-4560790 Msa0665170:intron 20.0%
!! GAGTTGAATTATCAAATATA+TGG + chr4_4:4561042-4561061 None:intergenic 20.0%
!! CATTATGATTAGTGAATATT+AGG + chr4_4:4561225-4561244 None:intergenic 20.0%
!! CTAATATTCACTAATCATAA+TGG - chr4_4:4561223-4561242 Msa0665170:intron 20.0%
!!! TATAGTTATATCTTTTAGTC+AGG - chr4_4:4561328-4561347 Msa0665170:intron 20.0%
!!! TTTTGAACATTAGATTTTAG+CGG + chr4_4:4561516-4561535 None:intergenic 20.0%
!!! TAATTTAAACTAGGCATTTT+AGG - chr4_4:4561692-4561711 Msa0665170:intron 20.0%
!! TAATTCATTGTCATCTATTA+CGG - chr4_4:4562061-4562080 Msa0665170:CDS 20.0%
!! CAGTTATGAAAATTAATAGA+TGG + chr4_4:4562431-4562450 None:intergenic 20.0%
!! TTTGTTTAAACGCTTATATA+TGG - chr4_4:4562910-4562929 Msa0665170:CDS 20.0%
!! AAACTTAAATGTGAAACATT+TGG + chr4_4:4562975-4562994 None:intergenic 20.0%
!!! ATTTAAGTTTCTATGGTTTT+GGG - chr4_4:4562985-4563004 Msa0665170:intron 20.0%
!! AGATACATATGCATAAATAA+CGG + chr4_4:4563850-4563869 None:intergenic 20.0%
!! AAAAGTTTATTCATACTTGA+TGG - chr4_4:4564087-4564106 Msa0665170:intron 20.0%
!! TAATGTTATGAAGAATTTAG+TGG - chr4_4:4557850-4557869 Msa0665170:intron 20.0%
!! TACTTGTAAAAAAACAGAAT+TGG - chr4_4:4564901-4564920 Msa0665170:intron 20.0%
!! ACTTGTAAAAAAACAGAATT+GGG - chr4_4:4564902-4564921 Msa0665170:intron 20.0%
!! TTCTTGAAATTACTTAAGTT+AGG - chr4_4:4558175-4558194 Msa0665170:intron 20.0%
!! AAACAAATCAAAACTTTACA+AGG + chr4_4:4558234-4558253 None:intergenic 20.0%
!!! CTTCAGAATGTTATATTTTT+TGG - chr4_4:4565578-4565597 Msa0665170:intron 20.0%
!!! AACATTTTCTAAACTATTCT+AGG - chr4_4:4565623-4565642 Msa0665170:intron 20.0%
!! TAATAAAGCATACAACTAAA+AGG + chr4_4:4565908-4565927 None:intergenic 20.0%
!!! TTTAGTTGTATGCTTTATTA+TGG - chr4_4:4565908-4565927 Msa0665170:intron 20.0%
!! AATGTTGAAGATATCATTAA+TGG - chr4_4:4566770-4566789 Msa0665170:intron 20.0%
! TATGAAATCGTGCAAATTAT+AGG + chr4_4:4555424-4555443 None:intergenic 25.0%
!!! TTTTTGAAGGAAATGTTAGT+TGG + chr4_4:4555918-4555937 None:intergenic 25.0%
!!! AGTTGGTTAGTTTTTTTTGA+AGG + chr4_4:4555931-4555950 None:intergenic 25.0%
! CATAAAAGTTCAATGTTAGT+TGG + chr4_4:4555948-4555967 None:intergenic 25.0%
!! CAACTAACATTGAACTTTTA+TGG - chr4_4:4555946-4555965 Msa0665170:intron 25.0%
!!! TCATTTGTTAGCATTTTACT+TGG + chr4_4:4555984-4556003 None:intergenic 25.0%
! AGTAAAATGCTAACAAATGA+TGG - chr4_4:4555984-4556003 Msa0665170:CDS 25.0%
! GTAAAATGCTAACAAATGAT+GGG - chr4_4:4555985-4556004 Msa0665170:CDS 25.0%
! TAACAATGGACAAAATGTAA+TGG - chr4_4:4556076-4556095 Msa0665170:CDS 25.0%
! TTAATGATATATGTGTTTGC+AGG - chr4_4:4556359-4556378 Msa0665170:intron 25.0%
! TAATGATATATGTGTTTGCA+GGG - chr4_4:4556360-4556379 Msa0665170:intron 25.0%
!!! AAATTTGCTTCTTTTGGAAA+CGG + chr4_4:4557048-4557067 None:intergenic 25.0%
!! GAAAATTTAATTTCGAATCC+GGG + chr4_4:4557095-4557114 None:intergenic 25.0%
! AGAAACAACAAATTAGGATA+TGG + chr4_4:4557154-4557173 None:intergenic 25.0%
! AATTAAAAAAAATGGAGGGA+GGG + chr4_4:4557423-4557442 None:intergenic 25.0%
!! AATTCAGCTCAAATTTTGTA+GGG - chr4_4:4557589-4557608 Msa0665170:intron 25.0%
! AAGCTAATACTGAAAAATCA+AGG + chr4_4:4557660-4557679 None:intergenic 25.0%
! AAACAAAAACCCTAAAATAC+AGG + chr4_4:4557723-4557742 None:intergenic 25.0%
!!! GTACTAGATTTTGTTTTCTA+GGG - chr4_4:4557924-4557943 Msa0665170:intron 25.0%
! ATCTAGTACCAAATTCTAAA+AGG + chr4_4:4558030-4558049 None:intergenic 25.0%
!! TGGTACTAGATTTCAATTTT+AGG - chr4_4:4558039-4558058 Msa0665170:intron 25.0%
!! GGTACTAGATTTCAATTTTA+GGG - chr4_4:4558040-4558059 Msa0665170:intron 25.0%
!!! TAGTGCTAAATTTTGTTTCT+AGG - chr4_4:4558099-4558118 Msa0665170:intron 25.0%
!!! AGTGCTAAATTTTGTTTCTA+GGG - chr4_4:4558100-4558119 Msa0665170:intron 25.0%
! AAAACCTAGTAACAAATTCA+AGG + chr4_4:4558143-4558162 None:intergenic 25.0%
!! AATCTAAGATGTTCAACATT+GGG - chr4_4:4558275-4558294 Msa0665170:intron 25.0%
!! CATAAAAAGTTGAACCATTT+TGG + chr4_4:4558349-4558368 None:intergenic 25.0%
!! CAAAATGGTTCAACTTTTTA+TGG - chr4_4:4558347-4558366 Msa0665170:intron 25.0%
!! TTTGTTTGCTTGTTCTTTTT+GGG - chr4_4:4558401-4558420 Msa0665170:intron 25.0%
! AAAATTATCTGAATCACACA+GGG + chr4_4:4558502-4558521 None:intergenic 25.0%
! AAAAATTATCTGAATCACAC+AGG + chr4_4:4558503-4558522 None:intergenic 25.0%
! TAAAATCAAAATGCAAAGCA+GGG + chr4_4:4558589-4558608 None:intergenic 25.0%
! ATAAAATCAAAATGCAAAGC+AGG + chr4_4:4558590-4558609 None:intergenic 25.0%
!! TGAAGCATTTAATCACAAAT+TGG + chr4_4:4558697-4558716 None:intergenic 25.0%
! AGTGATTTACTGATATGATA+AGG - chr4_4:4558814-4558833 Msa0665170:intron 25.0%
!! ATTGGTTCTTGAATTCAATT+AGG - chr4_4:4558983-4559002 Msa0665170:intron 25.0%
!!! AATTGTTTCTAACGCATTTT+TGG - chr4_4:4559049-4559068 Msa0665170:intron 25.0%
!!! ACAACTTTTTGAGAAATCTT+TGG - chr4_4:4559828-4559847 Msa0665170:intron 25.0%
! AATGTTGAAGATATCGTTAA+TGG - chr4_4:4560114-4560133 Msa0665170:intron 25.0%
!!! TTAACATTTGGGTTTTACTT+AGG - chr4_4:4560432-4560451 Msa0665170:intron 25.0%
!! TTTTTCATGTGAACTATATG+AGG - chr4_4:4560539-4560558 Msa0665170:intron 25.0%
!!! TGAGGAACTGAATTTTTTTT+AGG - chr4_4:4560557-4560576 Msa0665170:intron 25.0%
!! ACTATGATTTTGTGAAACTT+AGG - chr4_4:4560926-4560945 Msa0665170:intron 25.0%
!! TCAAATATATGGAATTTTCC+AGG + chr4_4:4561031-4561050 None:intergenic 25.0%
! ATATCATTATTGTTCAAACC+AGG - chr4_4:4561075-4561094 Msa0665170:intron 25.0%
!!! TTTGAACATTAGATTTTAGC+GGG + chr4_4:4561515-4561534 None:intergenic 25.0%
! AGACGATTCTAATTTAAACT+AGG - chr4_4:4561683-4561702 Msa0665170:intron 25.0%
! AAAATTAATAGATGGGCATT+GGG + chr4_4:4562423-4562442 None:intergenic 25.0%
! AAATCTATAGATCGAAATTC+AGG + chr4_4:4562768-4562787 None:intergenic 25.0%
! TAATCATCAGTAAACAATGA+CGG + chr4_4:4562792-4562811 None:intergenic 25.0%
! TGAATATCAAAATGAGATTC+TGG + chr4_4:4562852-4562871 None:intergenic 25.0%
! AAATTAAAGGTTCATGTAGA+GGG - chr4_4:4562871-4562890 Msa0665170:CDS 25.0%
! TTAAATGTGAAACATTTGGA+GGG + chr4_4:4562971-4562990 None:intergenic 25.0%
!! GTTTCACATTTAAGTTTCTA+TGG - chr4_4:4562978-4562997 Msa0665170:CDS 25.0%
!!! CATTTAAGTTTCTATGGTTT+TGG - chr4_4:4562984-4563003 Msa0665170:CDS 25.0%
!!! TTCAGTTTTGTATGATTACT+TGG - chr4_4:4563040-4563059 Msa0665170:CDS 25.0%
!!! TCAGTTTTGTATGATTACTT+GGG - chr4_4:4563041-4563060 Msa0665170:CDS 25.0%
!! TATTGTTGCCTTTGATTTAA+TGG - chr4_4:4563229-4563248 Msa0665170:intron 25.0%
! TTTCCTTTCCATTAAATCAA+AGG + chr4_4:4563240-4563259 None:intergenic 25.0%
!! TGATATTGATTATCGTTCTA+CGG - chr4_4:4563283-4563302 Msa0665170:intron 25.0%
! AAATATCTAGAAAACAGTGA+AGG + chr4_4:4563666-4563685 None:intergenic 25.0%
! GTTATTTATGCATATGTATC+TGG - chr4_4:4563849-4563868 Msa0665170:intron 25.0%
!!! ATGCTTGGAATTGTTTTATA+TGG - chr4_4:4563985-4564004 Msa0665170:intron 25.0%
!!! GAATTGTTTTATATGGTAAG+TGG - chr4_4:4563992-4564011 Msa0665170:intron 25.0%
!!! GTTATTGTTATTTGTTACTG+TGG - chr4_4:4564669-4564688 Msa0665170:intron 25.0%
! CTTGTAAAAAAACAGAATTG+GGG - chr4_4:4564903-4564922 Msa0665170:intron 25.0%
!!! TAGTGCTAAATTTTGTTTCT+AGG - chr4_4:4558099-4558118 Msa0665170:intron 25.0%
!!! AGTGCTAAATTTTGTTTCTA+GGG - chr4_4:4558100-4558119 Msa0665170:intron 25.0%
!! AATCTAAGATGTTCAACATT+GGG - chr4_4:4558275-4558294 Msa0665170:intron 25.0%
!!! GTAGAAATTGGTTTTTAACA+AGG - chr4_4:4565233-4565252 Msa0665170:intron 25.0%
! AAAATTATCTGAATCACACA+GGG + chr4_4:4558502-4558521 None:intergenic 25.0%
! AAAAATTATCTGAATCACAC+AGG + chr4_4:4558503-4558522 None:intergenic 25.0%
!!! CACTTTGATTTTATCCAAAA+TGG - chr4_4:4565483-4565502 Msa0665170:intron 25.0%
!!! ATTTTATCCAAAATGGATTC+TGG - chr4_4:4565490-4565509 Msa0665170:intron 25.0%
!! GTTTAGAAAATGTTATTTGC+CGG + chr4_4:4565617-4565636 None:intergenic 25.0%
! CTTACTGTTTAGTGATTTAT+TGG - chr4_4:4565671-4565690 Msa0665170:intron 25.0%
!! TATGTGTTAATGTTGCTTAT+TGG - chr4_4:4565829-4565848 Msa0665170:intron 25.0%
! TGTTGCTAACATGTTTATAT+TGG - chr4_4:4565878-4565897 Msa0665170:intron 25.0%
! GGTAATTAAACAAAGTAATG+TGG - chr4_4:4566367-4566386 Msa0665170:intron 25.0%
!!! ACAACTTTTTGAGAAATCTT+TGG - chr4_4:4559828-4559847 Msa0665170:intron 25.0%
! AGAAAATAGTAAAGCTGAAT+TGG - chr4_4:4566547-4566566 Msa0665170:intron 25.0%
!!! TTGATCATGAAAGTGTTATT+TGG - chr4_4:4566861-4566880 Msa0665170:intron 25.0%
AAAAATCAAAGTTTCCCTGT+TGG + chr4_4:4555341-4555360 None:intergenic 30.0%
!! GGTTTTATATGTCACATTCA+TGG + chr4_4:4555574-4555593 None:intergenic 30.0%
! ATATAAAACCTGTACTGACA+TGG - chr4_4:4555584-4555603 Msa0665170:CDS 30.0%
ATTCAGTGAAACAAGTTTGA+GGG - chr4_4:4555828-4555847 Msa0665170:CDS 30.0%
CACGTGTCAATAATACAAAT+TGG - chr4_4:4555875-4555894 Msa0665170:CDS 30.0%
! TTGTGTGTACAAATTTGCTT+TGG - chr4_4:4556208-4556227 Msa0665170:intron 30.0%
ATTGACTGAAAAGAAGTTTC+TGG - chr4_4:4556951-4556970 Msa0665170:intron 30.0%
TACAAACGGTGATATCTAAT+TGG - chr4_4:4557021-4557040 Msa0665170:intron 30.0%
!! GACTGTAAATTTGCTTCTTT+TGG + chr4_4:4557054-4557073 None:intergenic 30.0%
TAAGTAAGTTTATCAAAGCC+CGG - chr4_4:4557074-4557093 Msa0665170:intron 30.0%
! AACTGATTCAACAACACAAA+TGG - chr4_4:4557276-4557295 Msa0665170:intron 30.0%
ATTAAAAAAAATGGAGGGAG+GGG + chr4_4:4557422-4557441 None:intergenic 30.0%
CAATTAAAAAAAATGGAGGG+AGG + chr4_4:4557424-4557443 None:intergenic 30.0%
!!! TATGCAGCTCAGATTTTTTA+GGG - chr4_4:4557495-4557514 Msa0665170:intron 30.0%
! CAATTCAGCTCAAATTTTGT+AGG - chr4_4:4557588-4557607 Msa0665170:intron 30.0%
! TTATGCACTTCCTGTATTTT+AGG - chr4_4:4557710-4557729 Msa0665170:intron 30.0%
! TATGCACTTCCTGTATTTTA+GGG - chr4_4:4557711-4557730 Msa0665170:intron 30.0%
!! TAGTTGTAGATATTGGTTCT+AGG - chr4_4:4557867-4557886 Msa0665170:intron 30.0%
!! AGTTGTAGATATTGGTTCTA+GGG - chr4_4:4557868-4557887 Msa0665170:intron 30.0%
!! TTCTAGGGTTTACCTAAATT+GGG - chr4_4:4557883-4557902 Msa0665170:intron 30.0%
CTGCAAATTAAACCCAATTT+AGG + chr4_4:4557898-4557917 None:intergenic 30.0%
!! TGGGTTTAATTTGCAGAATT+TGG - chr4_4:4557902-4557921 Msa0665170:intron 30.0%
!!! GGTACTAGATTTTGTTTTCT+AGG - chr4_4:4557923-4557942 Msa0665170:intron 30.0%
!! GTTACCTTGAATTTGTTACT+AGG - chr4_4:4558136-4558155 Msa0665170:intron 30.0%
!!! TGTTACTAGGTTTTGTTTCT+AGG - chr4_4:4558149-4558168 Msa0665170:intron 30.0%
!!! GTTACTAGGTTTTGTTTCTA+GGG - chr4_4:4558150-4558169 Msa0665170:intron 30.0%
! GAATCTAAGATGTTCAACAT+TGG - chr4_4:4558274-4558293 Msa0665170:intron 30.0%
!!! GTAGAAATTGGTTTTTGACA+AGG - chr4_4:4558297-4558316 Msa0665170:intron 30.0%
AACATACTCTTACACCAAAA+TGG - chr4_4:4558332-4558351 Msa0665170:intron 30.0%
ACAAACCACAAATGGAAAAT+TGG + chr4_4:4558386-4558405 None:intergenic 30.0%
! GTTTGTTTGCTTGTTCTTTT+TGG - chr4_4:4558400-4558419 Msa0665170:intron 30.0%
CATGTCAATTTCATTAGCTA+TGG + chr4_4:4558639-4558658 None:intergenic 30.0%
! TTTTGGTGAAAATTATCCAC+TGG - chr4_4:4558729-4558748 Msa0665170:intron 30.0%
! AACGTTTTCTGAACTATTCT+AGG - chr4_4:4558757-4558776 Msa0665170:intron 30.0%
ACACCAACACATAAAAACAT+CGG + chr4_4:4558958-4558977 None:intergenic 30.0%
! TATGTGTTGGTGTTTCTTAT+TGG - chr4_4:4558965-4558984 Msa0665170:intron 30.0%
! CAGTTTTTCACTAAGAAGAA+AGG - chr4_4:4559082-4559101 Msa0665170:intron 30.0%
TGACATATCAGAGTTTGATT+GGG - chr4_4:4559207-4559226 Msa0665170:intron 30.0%
!!! GATTTCCTACTACGTTTTTT+CGG + chr4_4:4559313-4559332 None:intergenic 30.0%
TTACTTTGCTTAATATCCTC+AGG + chr4_4:4559451-4559470 None:intergenic 30.0%
GGATATTAAGCAAAGTAATG+TGG - chr4_4:4559453-4559472 Msa0665170:intron 30.0%
ATTAAGCAAAGTAATGTGGA+AGG - chr4_4:4559457-4559476 Msa0665170:intron 30.0%
ACCAACAAAAAAACTTCTTG+AGG - chr4_4:4559723-4559742 Msa0665170:intron 30.0%
!!! TCCTCAAGAAGTTTTTTTGT+TGG + chr4_4:4559727-4559746 None:intergenic 30.0%
! TTTTCTTTTCCCAAGTCAAT+TGG + chr4_4:4560018-4560037 None:intergenic 30.0%
!! ATTGACTTGGGAAAAGAAAA+TGG - chr4_4:4560018-4560037 Msa0665170:intron 30.0%
AACTGATATCAGTTATAAGC+AGG - chr4_4:4560044-4560063 Msa0665170:intron 30.0%
GATGAAAAGCAAAGAATTCA+AGG - chr4_4:4560159-4560178 Msa0665170:intron 30.0%
!!! AGAATTTTTCAAGACACATG+TGG - chr4_4:4560611-4560630 Msa0665170:intron 30.0%
ATGTTGATCTGTCTTTGATA+TGG - chr4_4:4560800-4560819 Msa0665170:intron 30.0%
CGTTATAAGATACTCATGTT+TGG - chr4_4:4560828-4560847 Msa0665170:intron 30.0%
GGCATAATGATTATTATGTG+TGG - chr4_4:4560947-4560966 Msa0665170:intron 30.0%
AAAAAGTAGCGTATCATATC+TGG + chr4_4:4561162-4561181 None:intergenic 30.0%
CATACTCTACTGTAAGTAAT+AGG + chr4_4:4561293-4561312 None:intergenic 30.0%
CTATTACTTACAGTAGAGTA+TGG - chr4_4:4561291-4561310 Msa0665170:intron 30.0%
TTTAGTCAGGAGAAATAAAG+TGG - chr4_4:4561341-4561360 Msa0665170:intron 30.0%
TTAGTCAGGAGAAATAAAGT+GGG - chr4_4:4561342-4561361 Msa0665170:intron 30.0%
CAAATTACTTTCCCCTTAAA+TGG - chr4_4:4561422-4561441 Msa0665170:intron 30.0%
AATAGCTAGTCATTGTTACT+GGG + chr4_4:4561490-4561509 None:intergenic 30.0%
AATTGTGTACATGTATGACT+TGG - chr4_4:4561573-4561592 Msa0665170:intron 30.0%
AGAAATTACACTCATCTTCA+AGG + chr4_4:4561823-4561842 None:intergenic 30.0%
TACACTTACCAAAACTCAAT+CGG + chr4_4:4561850-4561869 None:intergenic 30.0%
GAAACATGAGAAAACATGAA+GGG + chr4_4:4561941-4561960 None:intergenic 30.0%
TGAAACATGAGAAAACATGA+AGG + chr4_4:4561942-4561961 None:intergenic 30.0%
! TCTTTCTCTCTCATTTTCAA+TGG - chr4_4:4562000-4562019 Msa0665170:intron 30.0%
TTACGGTCTATTCAAAATGA+AGG - chr4_4:4562078-4562097 Msa0665170:CDS 30.0%
GAAGGTGGATATGTATAAAT+GGG + chr4_4:4562278-4562297 None:intergenic 30.0%
TGAAGGTGGATATGTATAAA+TGG + chr4_4:4562279-4562298 None:intergenic 30.0%
ATATCATCCCTAAATGTACA+TGG + chr4_4:4562303-4562322 None:intergenic 30.0%
GAAAATTAATAGATGGGCAT+TGG + chr4_4:4562424-4562443 None:intergenic 30.0%
! CTGATGTATGCTTTGATTTA+GGG + chr4_4:4562501-4562520 None:intergenic 30.0%
! TCTGATGTATGCTTTGATTT+AGG + chr4_4:4562502-4562521 None:intergenic 30.0%
TAAATCAAAGCATACATCAG+AGG - chr4_4:4562501-4562520 Msa0665170:CDS 30.0%
AAACGAATAAGAGACTTAAC+TGG + chr4_4:4562597-4562616 None:intergenic 30.0%
AGAAAACCATGACTTAGAAA+CGG + chr4_4:4562625-4562644 None:intergenic 30.0%
ACTGTTAAGAAGAGAATTCT+AGG + chr4_4:4562708-4562727 None:intergenic 30.0%
CAAATTAAAGGTTCATGTAG+AGG - chr4_4:4562870-4562889 Msa0665170:CDS 30.0%
AGGTATTTGTCTATGAAATC+CGG + chr4_4:4562946-4562965 None:intergenic 30.0%
CTTAAATGTGAAACATTTGG+AGG + chr4_4:4562972-4562991 None:intergenic 30.0%
CGAATCAAAAGATGATTACT+TGG - chr4_4:4563013-4563032 Msa0665170:intron 30.0%
ATCAAAAGATGATTACTTGG+TGG - chr4_4:4563016-4563035 Msa0665170:intron 30.0%
!! CAGTTTTGTATGATTACTTG+GGG - chr4_4:4563042-4563061 Msa0665170:CDS 30.0%
! TTGCCTTTGATTTAATGGAA+AGG - chr4_4:4563234-4563253 Msa0665170:intron 30.0%
TAATCAATATCATCTGGAAG+AGG + chr4_4:4563275-4563294 None:intergenic 30.0%
GAACGATAATCAATATCATC+TGG + chr4_4:4563281-4563300 None:intergenic 30.0%
! TTCTACGGATTGTGATTTAT+GGG - chr4_4:4563298-4563317 Msa0665170:intron 30.0%
TGTGATTTATGGGTATTTAG+AGG - chr4_4:4563308-4563327 Msa0665170:intron 30.0%
TTAGAGGATTTCTAAGTCTA+TGG - chr4_4:4563324-4563343 Msa0665170:intron 30.0%
TAGAGGATTTCTAAGTCTAT+GGG - chr4_4:4563325-4563344 Msa0665170:intron 30.0%
! ATTTCTAAGTCTATGGGTTA+TGG - chr4_4:4563331-4563350 Msa0665170:intron 30.0%
ACAAAAAGTGGTGATATTGT+TGG - chr4_4:4563473-4563492 Msa0665170:intron 30.0%
TATTGCAAAGATTCACGAAA+CGG - chr4_4:4563560-4563579 Msa0665170:intron 30.0%
TTACGAGATATTGAATCAGT+TGG + chr4_4:4563752-4563771 None:intergenic 30.0%
ATAAGTTCTTTGAGTCAAAG+CGG + chr4_4:4564065-4564084 None:intergenic 30.0%
AAATACCAGTTTCTTCCAAT+TGG + chr4_4:4564229-4564248 None:intergenic 30.0%
! TTTATGCAGCTCAGATTTTT+AGG - chr4_4:4564351-4564370 Msa0665170:intron 30.0%
! TTATGCAGCTCAGATTTTTA+GGG - chr4_4:4564352-4564371 Msa0665170:intron 30.0%
TGTTATGAAGAATTTAGTGG+TGG - chr4_4:4564796-4564815 Msa0665170:intron 30.0%
!! TTTCTAGGGTTTACCTAAAT+GGG - chr4_4:4564825-4564844 Msa0665170:intron 30.0%
CTGTAAATTAAACCCCATTT+AGG + chr4_4:4564841-4564860 None:intergenic 30.0%
! GGGGTTTAATTTACAGAATT+TGG - chr4_4:4564845-4564864 Msa0665170:intron 30.0%
!! TGGTACTAGATTTTGTTTCT+AGG - chr4_4:4564865-4564884 Msa0665170:intron 30.0%
!!! GGTACTAGATTTTGTTTCTA+GGG - chr4_4:4564866-4564885 Msa0665170:intron 30.0%
!!! TTTCTAGGGTTTTCCTATAT+GGG - chr4_4:4564936-4564955 Msa0665170:intron 30.0%
!!! ACCTTTTAGAATTTGGTACT+AGG - chr4_4:4558026-4558045 Msa0665170:intron 30.0%
ACCTAGTACCAAATTCTAAA+AGG + chr4_4:4564966-4564985 None:intergenic 30.0%
! TGGTACTAGGTTTCAATTTT+AGG - chr4_4:4564975-4564994 Msa0665170:intron 30.0%
! GGTACTAGGTTTCAATTTTA+GGG - chr4_4:4564976-4564995 Msa0665170:intron 30.0%
! GAATCTAAGATGTTCAACAT+TGG - chr4_4:4558274-4558293 Msa0665170:intron 30.0%
! TCTGTTTGCTTGTTCTTTTT+GGG - chr4_4:4565287-4565306 Msa0665170:intron 30.0%
!! GCTTTATTGATGTTGTCTTT+TGG - chr4_4:4565309-4565328 Msa0665170:intron 30.0%
TAAAATCAAAGTGCAAAGCA+GGG + chr4_4:4565476-4565495 None:intergenic 30.0%
ATAAAATCAAAGTGCAAAGC+AGG + chr4_4:4565477-4565496 None:intergenic 30.0%
! TTACAAACCAGAATCCATTT+TGG + chr4_4:4565500-4565519 None:intergenic 30.0%
! TTTTGGTGAAAATTATCCAC+CGG - chr4_4:4558729-4558748 Msa0665170:intron 30.0%
!! GTGATTTATTGGTGTTGATT+AGG - chr4_4:4565682-4565701 Msa0665170:intron 30.0%
! GTACTTCTTCAATTGTCTTT+TGG + chr4_4:4566048-4566067 None:intergenic 30.0%
TGACATATCAGAGTTTGATT+GGG - chr4_4:4559207-4559226 Msa0665170:intron 30.0%
TTGTTGCTGAAAAACTATCA+GGG - chr4_4:4566501-4566520 Msa0665170:intron 30.0%
! TTTTCTTTTTCCAACTCAAC+TGG + chr4_4:4566533-4566552 None:intergenic 30.0%
! TTTTCCTTTTCCAATTCAAC+TGG + chr4_4:4566674-4566693 None:intergenic 30.0%
GTTGAATTGGAAAAGGAAAA+TGG - chr4_4:4566674-4566693 Msa0665170:intron 30.0%
GATGAAAAGCAAACAATTCA+AGG - chr4_4:4566815-4566834 Msa0665170:intron 30.0%
TGATGAACAAGTGAAGAAAA+TGG - chr4_4:4566838-4566857 Msa0665170:intron 30.0%
! ACTTGAGGATTTTCCAATTG+CGG + chr4_4:4555296-4555315 None:intergenic 35.0%
GAAATCGTGCAAATTATAGG+AGG + chr4_4:4555421-4555440 None:intergenic 35.0%
AATGAGAAGTGAATCTATCG+TGG - chr4_4:4555529-4555548 Msa0665170:CDS 35.0%
TTATTACACCATGTCAGTAC+AGG + chr4_4:4555595-4555614 None:intergenic 35.0%
! TTGTTGTTGTGACTTACATG+TGG + chr4_4:4555680-4555699 None:intergenic 35.0%
GATTCAGTGAAACAAGTTTG+AGG - chr4_4:4555827-4555846 Msa0665170:CDS 35.0%
TAAGCTTGTGATACTAGTAG+TGG - chr4_4:4555851-4555870 Msa0665170:CDS 35.0%
AAGCTTGTGATACTAGTAGT+GGG - chr4_4:4555852-4555871 Msa0665170:CDS 35.0%
GACTGTGTGTGTAAAAAAAC+TGG + chr4_4:4556117-4556136 None:intergenic 35.0%
!! CTATAGAGTTTGATGGTGAT+TGG + chr4_4:4556242-4556261 None:intergenic 35.0%
CACGATACTATAGAGTTTGA+TGG + chr4_4:4556249-4556268 None:intergenic 35.0%
CTCTATAAAGGAAATAGAGC+AGG - chr4_4:4556312-4556331 Msa0665170:intron 35.0%
! GTTTGTTGAGTTAGGATTTG+TGG - chr4_4:4556501-4556520 Msa0665170:intron 35.0%
TTAAAAAAAATGGAGGGAGG+GGG + chr4_4:4557421-4557440 None:intergenic 35.0%
!!! CTATGCAGCTCAGATTTTTT+AGG - chr4_4:4557494-4557513 Msa0665170:intron 35.0%
!! GTTCTAGGGTTTACCTAAAT+TGG - chr4_4:4557882-4557901 Msa0665170:intron 35.0%
TTTCTTGGGTTTGCCTATAT+GGG - chr4_4:4558000-4558019 Msa0665170:intron 35.0%
TCTAAAAGGTAACCCCATAT+AGG + chr4_4:4558016-4558035 None:intergenic 35.0%
!!! TGGGGTTACCTTTTAGAATT+TGG - chr4_4:4558019-4558038 Msa0665170:intron 35.0%
GTTCAACATTGGGTAGAAAT+TGG - chr4_4:4558285-4558304 Msa0665170:intron 35.0%
! TAGTGCCAATTTTCCATTTG+TGG - chr4_4:4558378-4558397 Msa0665170:intron 35.0%
ACAAGCAAACAAACCACAAA+TGG + chr4_4:4558394-4558413 None:intergenic 35.0%
AACAGAAAAACGAAATCACG+AGG + chr4_4:4558841-4558860 None:intergenic 35.0%
!! TGTCCGATGTTTTTATGTGT+TGG - chr4_4:4558952-4558971 Msa0665170:intron 35.0%
AAAATGATCTCAGGCTTTCT+TGG + chr4_4:4559112-4559131 None:intergenic 35.0%
TAGGTTCCAAAAGACAATTG+AGG - chr4_4:4559155-4559174 Msa0665170:intron 35.0%
! GTACTTCCTCAATTGTCTTT+TGG + chr4_4:4559164-4559183 None:intergenic 35.0%
AAGTACCTGAATCAACATTC+TGG - chr4_4:4559178-4559197 Msa0665170:intron 35.0%
AGTACCTGAATCAACATTCT+GGG - chr4_4:4559179-4559198 Msa0665170:intron 35.0%
CAATCAAACTCTGATATGTC+AGG + chr4_4:4559208-4559227 None:intergenic 35.0%
CTGACATATCAGAGTTTGAT+TGG - chr4_4:4559206-4559225 Msa0665170:intron 35.0%
GACATATCAGAGTTTGATTG+GGG - chr4_4:4559208-4559227 Msa0665170:intron 35.0%
AAACGTAGTAGGAAATCATC+TGG - chr4_4:4559316-4559335 Msa0665170:intron 35.0%
! GAAATCATCTGGTTCAAAGA+AGG - chr4_4:4559327-4559346 Msa0665170:intron 35.0%
TTGCTTAATATCCTCAGGAT+CGG + chr4_4:4559446-4559465 None:intergenic 35.0%
! ACTTGAGGATTTTCCAATTG+CGG + chr4_4:4555296-4555315 None:intergenic 35.0%
! ACCTGAGGATTTTCCAATAA+CGG + chr4_4:4559778-4559797 None:intergenic 35.0%
TTCTCAAAAAGTTGTTCTGC+CGG + chr4_4:4559823-4559842 None:intergenic 35.0%
ATTGTTGCTGAAAAACTGTC+AGG - chr4_4:4559856-4559875 Msa0665170:intron 35.0%
TTGTTGCTGAAAAACTGTCA+GGG - chr4_4:4559857-4559876 Msa0665170:intron 35.0%
AAAGATGTTTCTTCCACTTG+AGG + chr4_4:4559922-4559941 None:intergenic 35.0%
TCAAGTGGAAGAAACATCTT+TGG - chr4_4:4559921-4559940 Msa0665170:intron 35.0%
TGTCGCAGAAAAACCAAAAA+AGG - chr4_4:4559987-4560006 Msa0665170:intron 35.0%
!!! TCAATTGGTGCTTCCTTTTT+TGG + chr4_4:4560003-4560022 None:intergenic 35.0%
AGTTATAAGCAGGAGAAATC+AGG - chr4_4:4560054-4560073 Msa0665170:intron 35.0%
AAAGCAAAGAATTCAAGGTG+AGG - chr4_4:4560164-4560183 Msa0665170:intron 35.0%
!! TTTTGCAAAGCTTGGTAGTA+AGG - chr4_4:4560294-4560313 Msa0665170:intron 35.0%
!!! TAGAGCCCTTAACTTTTTTG+TGG - chr4_4:4560342-4560361 Msa0665170:intron 35.0%
CAGCACCACAAAAAAGTTAA+GGG + chr4_4:4560350-4560369 None:intergenic 35.0%
TTAGCTATTCTGTGACATTC+TGG - chr4_4:4560384-4560403 Msa0665170:intron 35.0%
AAAACCAAAAGACCTGATCT+AGG + chr4_4:4560477-4560496 None:intergenic 35.0%
GCGTGAGTTTGATAGAATTT+CGG - chr4_4:4560855-4560874 Msa0665170:intron 35.0%
GAAATTAAATGCTTGTGTCC+TGG - chr4_4:4561010-4561029 Msa0665170:intron 35.0%
CAATTCTTCATAAAGGAACC+TGG + chr4_4:4561096-4561115 None:intergenic 35.0%
!!! GATACGCTACTTTTTTTGAC+AGG - chr4_4:4561167-4561186 Msa0665170:intron 35.0%
TAGGAATCAGACGTGTATTT+AGG + chr4_4:4561206-4561225 None:intergenic 35.0%
TCACACAACTCACCATTTAA+GGG + chr4_4:4561437-4561456 None:intergenic 35.0%
ATCACACAACTCACCATTTA+AGG + chr4_4:4561438-4561457 None:intergenic 35.0%
ATAGCTAGTCATTGTTACTG+GGG + chr4_4:4561489-4561508 None:intergenic 35.0%
CAATAGCTAGTCATTGTTAC+TGG + chr4_4:4561491-4561510 None:intergenic 35.0%
! CAGTAACAATGACTAGCTAT+TGG - chr4_4:4561489-4561508 Msa0665170:intron 35.0%
TAGAGAGAATGAACGTCTAT+TGG - chr4_4:4561880-4561899 Msa0665170:intron 35.0%
AGAGAGAATGAACGTCTATT+GGG - chr4_4:4561881-4561900 Msa0665170:intron 35.0%
! CTCTCATTTTCAATGGATGT+TGG - chr4_4:4562007-4562026 Msa0665170:intron 35.0%
ATGGATGTTGGAGATTTCAA+TGG - chr4_4:4562019-4562038 Msa0665170:intron 35.0%
TAAATGTACATGGATGAAGG+TGG + chr4_4:4562293-4562312 None:intergenic 35.0%
ACCTTCATCCATGTACATTT+AGG - chr4_4:4562292-4562311 Msa0665170:intron 35.0%
CCTTCATCCATGTACATTTA+GGG - chr4_4:4562293-4562312 Msa0665170:intron 35.0%
TCTTACATCGTAGAGAGTTA+CGG + chr4_4:4562350-4562369 None:intergenic 35.0%
AACTCTCTACGATGTAAGAA+AGG - chr4_4:4562351-4562370 Msa0665170:CDS 35.0%
ATCAATTCATCAGGCAGATA+CGG + chr4_4:4562552-4562571 None:intergenic 35.0%
ATTTGGGTGATCAATTCATC+AGG + chr4_4:4562561-4562580 None:intergenic 35.0%
TGGTAACCTCATTAGGATTT+GGG + chr4_4:4562577-4562596 None:intergenic 35.0%
ACTTAACTGGTAACCTCATT+AGG + chr4_4:4562584-4562603 None:intergenic 35.0%
TCAAATCCGTTTCTAAGTCA+TGG - chr4_4:4562616-4562635 Msa0665170:CDS 35.0%
! ATTCTGGAAGTGGAAAACTA+GGG + chr4_4:4562836-4562855 None:intergenic 35.0%
! TCAAAATGAGATTCTGGAAG+TGG + chr4_4:4562846-4562865 None:intergenic 35.0%
TATATATGGAATCCATCCAC+CGG - chr4_4:4562924-4562943 Msa0665170:CDS 35.0%
TATTTGTCTATGAAATCCGG+TGG + chr4_4:4562943-4562962 None:intergenic 35.0%
TCTCATTCAGAGCTAATGAA+TGG - chr4_4:4563069-4563088 Msa0665170:intron 35.0%
CTCATTCAGAGCTAATGAAT+GGG - chr4_4:4563070-4563089 Msa0665170:intron 35.0%
TAATGAATGGGAAGAAATCG+TGG - chr4_4:4563082-4563101 Msa0665170:intron 35.0%
CCTTACTACAAAAAGGCAAA+TGG + chr4_4:4563118-4563137 None:intergenic 35.0%
! CCATTTGCCTTTTTGTAGTA+AGG - chr4_4:4563115-4563134 Msa0665170:intron 35.0%
TAAGGGATAAACAAAGGAAG+AGG + chr4_4:4563144-4563163 None:intergenic 35.0%
CTCTACTAAGGGATAAACAA+AGG + chr4_4:4563150-4563169 None:intergenic 35.0%
! CTTTGTTTATCCCTTAGTAG+AGG - chr4_4:4563148-4563167 Msa0665170:intron 35.0%
! GTTCTACGGATTGTGATTTA+TGG - chr4_4:4563297-4563316 Msa0665170:intron 35.0%
! ATGAGCATACGGTTGATATA+TGG - chr4_4:4563357-4563376 Msa0665170:intron 35.0%
! TGAGCATACGGTTGATATAT+GGG - chr4_4:4563358-4563377 Msa0665170:intron 35.0%
AATACAAAGTGCAGTCATCT+TGG - chr4_4:4563390-4563409 Msa0665170:intron 35.0%
ACTACTGATGATACCATTGA+TGG - chr4_4:4563431-4563450 Msa0665170:intron 35.0%
! ACTTTTTGTGCAACATACAG+GGG + chr4_4:4563462-4563481 None:intergenic 35.0%
!! CACTTTTTGTGCAACATACA+GGG + chr4_4:4563463-4563482 None:intergenic 35.0%
TTGGTGAGATATGATGACAA+AGG - chr4_4:4563515-4563534 Msa0665170:intron 35.0%
TCGTGAATCTTTGCAATAGT+TGG + chr4_4:4563558-4563577 None:intergenic 35.0%
TGTGCTGTATTATGAACTCT+TGG - chr4_4:4563691-4563710 Msa0665170:intron 35.0%
GTGCTGTATTATGAACTCTT+GGG - chr4_4:4563692-4563711 Msa0665170:intron 35.0%
! AGATATTGAATCAGTTGGTG+TGG + chr4_4:4563747-4563766 None:intergenic 35.0%
TCTAATGTATGTTGCGTTCA+CGG - chr4_4:4563879-4563898 Msa0665170:intron 35.0%
TGGTAAGTGGTAAATTAGTC+TGG - chr4_4:4564005-4564024 Msa0665170:intron 35.0%
TAAGTTCTTTGAGTCAAAGC+GGG + chr4_4:4564064-4564083 None:intergenic 35.0%
!!! TAGTGGTGGATTTTGTTTCT+AGG - chr4_4:4564810-4564829 Msa0665170:intron 35.0%
!!! AGTGGTGGATTTTGTTTCTA+GGG - chr4_4:4564811-4564830 Msa0665170:intron 35.0%
!! GTTTCTAGGGTTTACCTAAA+TGG - chr4_4:4564824-4564843 Msa0665170:intron 35.0%
!! TTCTAGGGTTTACCTAAATG+GGG - chr4_4:4564826-4564845 Msa0665170:intron 35.0%
!!! GTTTCTAGGGTTTTCCTATA+TGG - chr4_4:4564935-4564954 Msa0665170:intron 35.0%
!!! TTCTAGGGTTTTCCTATATG+GGG - chr4_4:4564937-4564956 Msa0665170:intron 35.0%
TCTAAAAGGTAACCCCATAT+AGG + chr4_4:4558016-4558035 None:intergenic 35.0%
!!! TGGGGTTACCTTTTAGAATT+TGG - chr4_4:4558019-4558038 Msa0665170:intron 35.0%
!!! TTTCTAGGGTTTTCCTGAAA+GGG - chr4_4:4565050-4565069 Msa0665170:intron 35.0%
GTTACCTTGAATTTGGTACT+GGG - chr4_4:4565073-4565092 Msa0665170:intron 35.0%
AAAACCCAGTACCAAATTCA+AGG + chr4_4:4565080-4565099 None:intergenic 35.0%
GTTCAACATTGGGTAGAAAT+TGG - chr4_4:4558285-4558304 Msa0665170:intron 35.0%
! GTCTGTTTGCTTGTTCTTTT+TGG - chr4_4:4565286-4565305 Msa0665170:intron 35.0%
!! TCTTTTGGAGATTGTGTCTT+AGG - chr4_4:4565324-4565343 Msa0665170:intron 35.0%
AATACAGAAAGATGCAGGAA+TGG + chr4_4:4565428-4565447 None:intergenic 35.0%
! TAGAAAATGTTATTTGCCGG+TGG + chr4_4:4565614-4565633 None:intergenic 35.0%
! TTGGTGTTCCTTTCTTCTTA+GGG + chr4_4:4559093-4559112 None:intergenic 35.0%
! AAAACGATCTCAGGTTTTCT+TGG + chr4_4:4565996-4566015 None:intergenic 35.0%
AAGTACCTGAATAACCATTC+TGG - chr4_4:4566062-4566081 Msa0665170:intron 35.0%
AGTACCTGAATAACCATTCT+GGG - chr4_4:4566063-4566082 Msa0665170:intron 35.0%
CAATCAAACTCTGATATGTC+AGG + chr4_4:4559208-4559227 None:intergenic 35.0%
CTGACATATCAGAGTTTGAT+TGG - chr4_4:4559206-4559225 Msa0665170:intron 35.0%
GACATATCAGAGTTTGATTG+GGG - chr4_4:4559208-4559227 Msa0665170:intron 35.0%
! GATTTTCGACTACGTTTCTT+CGG + chr4_4:4566197-4566216 None:intergenic 35.0%
AAACGTAGTCGAAAATCATC+TGG - chr4_4:4566200-4566219 Msa0665170:intron 35.0%
! AAAATCATCTGGTTCAGAGT+AGG - chr4_4:4566211-4566230 Msa0665170:intron 35.0%
TTAAACTGAAACTCCTTCAG+AGG - chr4_4:4566247-4566266 Msa0665170:intron 35.0%
! AGAAGACTTTCCTTTTTCCT+TGG + chr4_4:4566276-4566295 None:intergenic 35.0%
AATAAAGATTGACGATGCAG+AGG - chr4_4:4566346-4566365 Msa0665170:intron 35.0%
! ACTTGATGCTTTTCCAATTG+CGG + chr4_4:4566422-4566441 None:intergenic 35.0%
TCAAGTGGAAGAAATATCGA+TGG - chr4_4:4566436-4566455 Msa0665170:intron 35.0%
TTCTCAAAAAGTTGTTCTGC+CGG + chr4_4:4559823-4559842 None:intergenic 35.0%
GTTGTTGCTGAAAAACTATC+AGG - chr4_4:4566500-4566519 Msa0665170:intron 35.0%
TGTTGCTGAAAAACTATCAG+GGG - chr4_4:4566502-4566521 Msa0665170:intron 35.0%
AGAACCAGTTGAATTGGAAA+AGG - chr4_4:4566667-4566686 Msa0665170:intron 35.0%
!! GTTTGCTTTTCATCACTTTC+TGG + chr4_4:4566809-4566828 None:intergenic 35.0%
GCAATTGGAAAATCCTCAAG+TGG - chr4_4:4555295-4555314 Msa0665170:CDS 40.0%
ATCAATGTGTCTTCCACTTG+AGG + chr4_4:4555311-4555330 None:intergenic 40.0%
TCAAGTGGAAGACACATTGA+TGG - chr4_4:4555310-4555329 Msa0665170:CDS 40.0%
AACGACTCATTCATGAAGCA+AGG - chr4_4:4555626-4555645 Msa0665170:CDS 40.0%
ACGACTCATTCATGAAGCAA+GGG - chr4_4:4555627-4555646 Msa0665170:CDS 40.0%
CAACAAAGGTAGAGATGTAG+AGG - chr4_4:4555793-4555812 Msa0665170:CDS 40.0%
TGGACAAAATGTAATGGCAG+TGG - chr4_4:4556082-4556101 Msa0665170:CDS 40.0%
!! ATGTAATGGCAGTGGATTGA+CGG - chr4_4:4556090-4556109 Msa0665170:CDS 40.0%
!! GTTTGATGGTGATTGGATGA+CGG + chr4_4:4556235-4556254 None:intergenic 40.0%
TCTTTGACATCACTTTGCTG+CGG + chr4_4:4557310-4557329 None:intergenic 40.0%
GAGACCAGTTTCTTCCAATT+GGG + chr4_4:4557376-4557395 None:intergenic 40.0%
AGAGACCAGTTTCTTCCAAT+TGG + chr4_4:4557377-4557396 None:intergenic 40.0%
TAAAAAAAATGGAGGGAGGG+GGG + chr4_4:4557420-4557439 None:intergenic 40.0%
!! TGGGGCAAGATTTTGTTTCT+TGG - chr4_4:4557985-4558004 Msa0665170:intron 40.0%
!! GGGGCAAGATTTTGTTTCTT+GGG - chr4_4:4557986-4558005 Msa0665170:intron 40.0%
GTTTCTTGGGTTTGCCTATA+TGG - chr4_4:4557999-4558018 Msa0665170:intron 40.0%
TTCTTGGGTTTGCCTATATG+GGG - chr4_4:4558001-4558020 Msa0665170:intron 40.0%
!! TGTTTCTAGGGTTTCCTGAA+AGG - chr4_4:4558112-4558131 Msa0665170:intron 40.0%
!! GTTTCTAGGGTTTCCTGAAA+GGG - chr4_4:4558113-4558132 Msa0665170:intron 40.0%
!! TTTCTAGGGTTTCCTGAAAG+GGG - chr4_4:4558114-4558133 Msa0665170:intron 40.0%
AATTCAAGGTAACCCCTTTC+AGG + chr4_4:4558129-4558148 None:intergenic 40.0%
GGCTTATTGATGTTGTCTCT+TGG - chr4_4:4558422-4558441 Msa0665170:intron 40.0%
TCTCTTGGAGATTGTGTCTT+AGG - chr4_4:4558437-4558456 Msa0665170:intron 40.0%
CAGAAAACGTTATTTGCCAG+TGG + chr4_4:4558748-4558767 None:intergenic 40.0%
TAACACAACACTGACACATG+TGG - chr4_4:4558916-4558935 Msa0665170:intron 40.0%
! ATCATTTTCGTTGCTCCAAC+TGG - chr4_4:4559124-4559143 Msa0665170:intron 40.0%
!! GATTCCCAGAATGTTGATTC+AGG + chr4_4:4559186-4559205 None:intergenic 40.0%
AAGGCGATCAACAAGGATTA+GGG - chr4_4:4559246-4559265 Msa0665170:intron 40.0%
!!! TTCCTACTACGTTTTTTCGG+AGG + chr4_4:4559310-4559329 None:intergenic 40.0%
TGGTTCAAAGAAGGATGACA+AGG - chr4_4:4559336-4559355 Msa0665170:intron 40.0%
AACTGAATCTCCTTCAGATG+AGG - chr4_4:4559366-4559385 Msa0665170:intron 40.0%
! AGAAGAGTTACCCTTTTCCT+TGG + chr4_4:4559392-4559411 None:intergenic 40.0%
! ATCGATGTTTCTTCGACTTG+AGG + chr4_4:4559505-4559524 None:intergenic 40.0%
TCAAGTCGAAGAAACATCGA+TGG - chr4_4:4559504-4559523 Msa0665170:intron 40.0%
!! TTCCAGATGCAGTTTTTCAG+CGG + chr4_4:4559575-4559594 None:intergenic 40.0%
! TCCTCAGAAAGTTGTTTCAC+CGG + chr4_4:4559631-4559650 None:intergenic 40.0%
GCAATTGGAAAATCCTCAAG+TGG - chr4_4:4555295-4555314 Msa0665170:CDS 40.0%
ATCAATGTGTCTTCCACTTG+AGG + chr4_4:4555311-4555330 None:intergenic 40.0%
TCAAGTGGAAGACACATTGA+TGG - chr4_4:4555310-4555329 Msa0665170:CDS 40.0%
GTTATTGGAAAATCCTCAGG+TGG - chr4_4:4559777-4559796 Msa0665170:intron 40.0%
ATCGATATTTCTTCCACCTG+AGG + chr4_4:4559793-4559812 None:intergenic 40.0%
TCAGGTGGAAGAAATATCGA+TGG - chr4_4:4559792-4559811 Msa0665170:intron 40.0%
AGAAATATCGATGGAGGAAC+CGG - chr4_4:4559801-4559820 Msa0665170:intron 40.0%
TGTTGCTGAAAAACTGTCAG+GGG - chr4_4:4559858-4559877 Msa0665170:intron 40.0%
! TGAGTTGGAAACAGCTGAAT+TGG - chr4_4:4559891-4559910 Msa0665170:intron 40.0%
TGAATTGGAAAAGCCTCAAG+TGG - chr4_4:4559906-4559925 Msa0665170:intron 40.0%
!! AAAGGAAGCACCAATTGACT+TGG - chr4_4:4560005-4560024 Msa0665170:intron 40.0%
!! AAGGAAGCACCAATTGACTT+GGG - chr4_4:4560006-4560025 Msa0665170:intron 40.0%
!! CTTTGCTTTTCATCACTTGC+TGG + chr4_4:4560153-4560172 None:intergenic 40.0%
TGAGGAACAAGTGAAGAAGA+TGG - chr4_4:4560182-4560201 Msa0665170:intron 40.0%
GCAGCACCACAAAAAAGTTA+AGG + chr4_4:4560351-4560370 None:intergenic 40.0%
CTATTCTGTGACATTCTGGA+TGG - chr4_4:4560388-4560407 Msa0665170:intron 40.0%
TGTGGCTGAAAAATAGGAAG+TGG + chr4_4:4560664-4560683 None:intergenic 40.0%
CTATTTGCCACAATTCAAGG+AGG + chr4_4:4560687-4560706 None:intergenic 40.0%
GCACTATTTGCCACAATTCA+AGG + chr4_4:4560690-4560709 None:intergenic 40.0%
GGCAAATAGTGCATTGTGAT+TGG - chr4_4:4560698-4560717 Msa0665170:intron 40.0%
! TGGGTTGAAACTTGAGAGTA+GGG - chr4_4:4561361-4561380 Msa0665170:intron 40.0%
CACACAACTCACCATTTAAG+GGG + chr4_4:4561436-4561455 None:intergenic 40.0%
GTGATACAATCATGCTTCGA+TGG - chr4_4:4561644-4561663 Msa0665170:intron 40.0%
ATGTCTTGATTGCGTGAATG+TGG - chr4_4:4561756-4561775 Msa0665170:intron 40.0%
TGTCTTGATTGCGTGAATGT+GGG - chr4_4:4561757-4561776 Msa0665170:intron 40.0%
!! TTCTATCGCCGATTGAGTTT+TGG - chr4_4:4561839-4561858 Msa0665170:intron 40.0%
CTTGAGAAGTTGAGATCACA+AGG + chr4_4:4562210-4562229 None:intergenic 40.0%
TTCATCCATGATGCTACGAA+AGG - chr4_4:4562243-4562262 Msa0665170:CDS 40.0%
CAATACCTTTCGTAGCATCA+TGG + chr4_4:4562251-4562270 None:intergenic 40.0%
CCCTAAATGTACATGGATGA+AGG + chr4_4:4562296-4562315 None:intergenic 40.0%
CTTACATCGTAGAGAGTTAC+GGG + chr4_4:4562349-4562368 None:intergenic 40.0%
!! ATTAATAGATGGGCATTGGG+TGG + chr4_4:4562420-4562439 None:intergenic 40.0%
AAAAGAACACGGTGAACAGA+TGG + chr4_4:4562461-4562480 None:intergenic 40.0%
TGATCACCCAAATCCTAATG+AGG - chr4_4:4562568-4562587 Msa0665170:CDS 40.0%
CTGGTAACCTCATTAGGATT+TGG + chr4_4:4562578-4562597 None:intergenic 40.0%
TTCAGGAGTAGTGTTTGAGA+AGG + chr4_4:4562751-4562770 None:intergenic 40.0%
AAACTAGGGTTTAGTGCAAC+AGG + chr4_4:4562822-4562841 None:intergenic 40.0%
! GATTCTGGAAGTGGAAAACT+AGG + chr4_4:4562837-4562856 None:intergenic 40.0%
TGTGAAACATTTGGAGGGAA+AGG + chr4_4:4562966-4562985 None:intergenic 40.0%
TGTTTATCCCTTAGTAGAGG+CGG - chr4_4:4563151-4563170 Msa0665170:intron 40.0%
TCTTCAACAGAGCTATTCAC+TGG - chr4_4:4563174-4563193 Msa0665170:intron 40.0%
! TCTAAGTCTATGGGTTATGG+TGG - chr4_4:4563334-4563353 Msa0665170:intron 40.0%
!!! CCACTTTTTGTGCAACATAC+AGG + chr4_4:4563464-4563483 None:intergenic 40.0%
CCTGTATGTTGCACAAAAAG+TGG - chr4_4:4563461-4563480 Msa0665170:intron 40.0%
AACAGATTGCGTTACTGGAT+TGG - chr4_4:4563496-4563515 Msa0665170:intron 40.0%
ACTCTGCATACATAGCCAAT+CGG + chr4_4:4563589-4563608 None:intergenic 40.0%
GTTCTACTTGTTTGTGCCAT+GGG + chr4_4:4563625-4563644 None:intergenic 40.0%
TGTTCTACTTGTTTGTGCCA+TGG + chr4_4:4563626-4563645 None:intergenic 40.0%
CTGTATTATGAACTCTTGGG+TGG - chr4_4:4563695-4563714 Msa0665170:intron 40.0%
TGAGCTTATGCATGTGTAAC+TGG - chr4_4:4563935-4563954 Msa0665170:intron 40.0%
TGTATGCTGCATTCAATGCT+TGG - chr4_4:4563970-4563989 Msa0665170:intron 40.0%
TCCTTCCAATTGGAAGAAAC+TGG - chr4_4:4564221-4564240 Msa0665170:intron 40.0%
ACCAGTTTCTTCCAATTGGA+AGG + chr4_4:4564225-4564244 None:intergenic 40.0%
!! TGGGGCTAGATTTTGTTTCT+AGG - chr4_4:4564921-4564940 Msa0665170:intron 40.0%
!!! GGGGCTAGATTTTGTTTCTA+GGG - chr4_4:4564922-4564941 Msa0665170:intron 40.0%
!!! GTTTCTAGGGTTTTCCTGAA+AGG - chr4_4:4565049-4565068 Msa0665170:intron 40.0%
!!! TTCTAGGGTTTTCCTGAAAG+GGG - chr4_4:4565051-4565070 Msa0665170:intron 40.0%
AATTCAAGGTAACCCCTTTC+AGG + chr4_4:4558129-4558148 None:intergenic 40.0%
GAAAGGGGTTACCTTGAATT+TGG - chr4_4:4558129-4558148 Msa0665170:intron 40.0%
GGTTACCTTGAATTTGGTAC+TGG - chr4_4:4565072-4565091 Msa0665170:intron 40.0%
ACAAGCAAACAGACCACAAA+TGG + chr4_4:4565280-4565299 None:intergenic 40.0%
AGCTCAATACAGAAAGATGC+AGG + chr4_4:4565433-4565452 None:intergenic 40.0%
CATGTCAGTTTCACTAGCTA+TGG + chr4_4:4565526-4565545 None:intergenic 40.0%
AACAGAAAAGCGAAATCACG+AGG + chr4_4:4565709-4565728 None:intergenic 40.0%
CTGTTGTAAATATGTTGCCC+CGG - chr4_4:4565724-4565743 Msa0665170:intron 40.0%
CAGTTCTTCCCTAAGAAGAA+AGG - chr4_4:4565966-4565985 Msa0665170:intron 40.0%
!! CTTGGTGTTCCTTTCTTCTT+AGG + chr4_4:4559094-4559113 None:intergenic 40.0%
GAACTTATCTCTTCTCCAGT+TGG + chr4_4:4566026-4566045 None:intergenic 40.0%
GATTCCCAGAATGGTTATTC+AGG + chr4_4:4566070-4566089 None:intergenic 40.0%
ATATGTCAGGATTCCCAGAA+TGG + chr4_4:4559195-4559214 None:intergenic 40.0%
TTGACGTTATCAGCATCACT+GGG + chr4_4:4566320-4566339 None:intergenic 40.0%
ATTGACGTTATCAGCATCAC+TGG + chr4_4:4566321-4566340 None:intergenic 40.0%
!! GCAATTGGAAAAGCATCAAG+TGG - chr4_4:4566421-4566440 Msa0665170:intron 40.0%
AGTGGAAGAAATATCGATGG+CGG - chr4_4:4566439-4566458 Msa0665170:intron 40.0%
TGAATTGGAAAAGCCTCAAG+TGG - chr4_4:4559906-4559925 Msa0665170:intron 40.0%
ACAGATGTTTCTTCCACTTG+AGG + chr4_4:4566578-4566597 None:intergenic 40.0%
TCAAGTGGAAGAAACATCTG+TGG - chr4_4:4566577-4566596 Msa0665170:intron 40.0%
AGAAACATCTGTGGTTGAAC+CGG - chr4_4:4566586-4566605 Msa0665170:intron 40.0%
! TCAACTGGTTCTTCCTCTTT+GGG + chr4_4:4566659-4566678 None:intergenic 40.0%
! TTCAACTGGTTCTTCCTCTT+TGG + chr4_4:4566660-4566679 None:intergenic 40.0%
AGAGGAAGAACCAGTTGAAT+TGG - chr4_4:4566661-4566680 Msa0665170:intron 40.0%
AGTTACAAGCAGGAGAAATC+CGG - chr4_4:4566710-4566729 Msa0665170:intron 40.0%
! ACATTGATGGCAGAACCAAC+AGG - chr4_4:4555323-4555342 Msa0665170:CDS 45.0%
! CATTGATGGCAGAACCAACA+GGG - chr4_4:4555324-4555343 Msa0665170:CDS 45.0%
ACTCATTCATGAAGCAAGGG+CGG - chr4_4:4555630-4555649 Msa0665170:CDS 45.0%
TGTTGTGTGTGTGTCAGTGA+AGG + chr4_4:4555778-4555797 None:intergenic 45.0%
CACTGACACACACACAACAA+AGG - chr4_4:4555779-4555798 Msa0665170:CDS 45.0%
TCCTCCCAATTGGAAGAAAC+TGG - chr4_4:4557369-4557388 Msa0665170:intron 45.0%
ACCAGTTTCTTCCAATTGGG+AGG + chr4_4:4557373-4557392 None:intergenic 45.0%
AAAAAAAATGGAGGGAGGGG+GGG + chr4_4:4557419-4557438 None:intergenic 45.0%
ACACAGGGCACAGAAAAAAG+TGG + chr4_4:4558487-4558506 None:intergenic 45.0%
ACCTGCACTCCATATTGAAG+TGG - chr4_4:4558874-4558893 Msa0665170:intron 45.0%
ACCACTTCAATATGGAGTGC+AGG + chr4_4:4558878-4558897 None:intergenic 45.0%
TGCACTCCATATTGAAGTGG+TGG - chr4_4:4558877-4558896 Msa0665170:intron 45.0%
GCACTCCATATTGAAGTGGT+GGG - chr4_4:4558878-4558897 Msa0665170:intron 45.0%
!! TCCATATTGAAGTGGTGGGT+TGG - chr4_4:4558882-4558901 Msa0665170:intron 45.0%
TCCAACCCACCACTTCAATA+TGG + chr4_4:4558886-4558905 None:intergenic 45.0%
ACAACACTGACACATGTGGT+TGG - chr4_4:4558920-4558939 Msa0665170:intron 45.0%
GGAGCAACGAAAATGATCTC+AGG + chr4_4:4559121-4559140 None:intergenic 45.0%
GAACCTATCTCTTCTCCAGT+TGG + chr4_4:4559142-4559161 None:intergenic 45.0%
TCAGAGTTTGATTGGGGAAC+CGG - chr4_4:4559214-4559233 Msa0665170:intron 45.0%
CTAATCCTTGTTGATCGCCT+TGG + chr4_4:4559247-4559266 None:intergenic 45.0%
CAAGGCGATCAACAAGGATT+AGG - chr4_4:4559245-4559264 Msa0665170:intron 45.0%
AGCCTCCGAAAAAACGTAGT+AGG - chr4_4:4559305-4559324 Msa0665170:intron 45.0%
! TTTTCCTTGGCCTCATCTGA+AGG + chr4_4:4559379-4559398 None:intergenic 45.0%
TTCAGATGAGGCCAAGGAAA+AGG - chr4_4:4559378-4559397 Msa0665170:intron 45.0%
TCAGATGAGGCCAAGGAAAA+GGG - chr4_4:4559379-4559398 Msa0665170:intron 45.0%
!! ATGGAAGTGTCTTCCACTTG+AGG + chr4_4:4559601-4559620 None:intergenic 45.0%
AGACACTTCCATGACTGAAC+CGG - chr4_4:4559609-4559628 Msa0665170:intron 45.0%
!! TTGTTTCACCGGTTCAGTCA+TGG + chr4_4:4559620-4559639 None:intergenic 45.0%
ACCGGTGAAACAACTTTCTG+AGG - chr4_4:4559627-4559646 Msa0665170:intron 45.0%
TGTCGCTGAAAAGCCGTTAT+TGG - chr4_4:4559762-4559781 Msa0665170:intron 45.0%
GCCGTTATTGGAAAATCCTC+AGG - chr4_4:4559774-4559793 Msa0665170:intron 45.0%
GGTGGAAGAAATATCGATGG+AGG - chr4_4:4559795-4559814 Msa0665170:intron 45.0%
! TCAGCTGTTTCCAACTCAAC+TGG + chr4_4:4559889-4559908 None:intergenic 45.0%
AACATCTTTGGCAGAACCTG+TGG - chr4_4:4559933-4559952 Msa0665170:intron 45.0%
ACTTGTATGCCTCCTAGATC+AGG - chr4_4:4560462-4560481 Msa0665170:intron 45.0%
ACCAAAAGACCTGATCTAGG+AGG + chr4_4:4560474-4560493 None:intergenic 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG + chr4_4:4560670-4560689 None:intergenic 45.0%
! GTGGGTTGAAACTTGAGAGT+AGG - chr4_4:4561360-4561379 Msa0665170:intron 45.0%
CTAGTCATTGTTACTGGGGT+GGG + chr4_4:4561485-4561504 None:intergenic 45.0%
GTCTTGATTGCGTGAATGTG+GGG - chr4_4:4561758-4561777 Msa0665170:intron 45.0%
ATACATCAGAGGAAGACGCA+TGG - chr4_4:4562512-4562531 Msa0665170:intron 45.0%
! TCTAGGAGTGTGTGTTGAAG+AGG + chr4_4:4562691-4562710 None:intergenic 45.0%
TGTCTATGAAATCCGGTGGA+TGG + chr4_4:4562939-4562958 None:intergenic 45.0%
GAGGCAGCCTTACTACAAAA+AGG + chr4_4:4563125-4563144 None:intergenic 45.0%
TTGAAGACCGCCTCTACTAA+GGG + chr4_4:4563161-4563180 None:intergenic 45.0%
CAACAGAGCTATTCACTGGT+TGG - chr4_4:4563178-4563197 Msa0665170:intron 45.0%
!! GGTTATGGTGGATGAGCATA+CGG - chr4_4:4563346-4563365 Msa0665170:intron 45.0%
TACAGGGGAAACACCATCAA+TGG + chr4_4:4563447-4563466 None:intergenic 45.0%
GTTGGAACAGATTGCGTTAC+TGG - chr4_4:4563491-4563510 Msa0665170:intron 45.0%
! TTCACGAAACGGATTCCGAT+TGG - chr4_4:4563571-4563590 Msa0665170:intron 45.0%
AGTCTTTGCTTTCACTCCCA+TGG - chr4_4:4563606-4563625 Msa0665170:intron 45.0%
AACTCTCTGCTCCTTCCAAT+TGG - chr4_4:4564211-4564230 Msa0665170:intron 45.0%
ACACAGGGCAGAGAAAAAAG+TGG + chr4_4:4565374-4565393 None:intergenic 45.0%
CTTCTTAGGGAAGAACTGCA+TGG + chr4_4:4565964-4565983 None:intergenic 45.0%
! ATCGTTTTCGTTGCTCCAAC+TGG - chr4_4:4566008-4566027 Msa0665170:intron 45.0%
! CTAATCCTTGATGATCGCCT+TGG + chr4_4:4566131-4566150 None:intergenic 45.0%
TTTCGACTACGTTTCTTCGG+AGG + chr4_4:4566194-4566213 None:intergenic 45.0%
TGGTTCAGAGTAGGATGACA+AGG - chr4_4:4566220-4566239 Msa0665170:intron 45.0%
! TTTTCCTTGGCTTCCTCTGA+AGG + chr4_4:4566263-4566282 None:intergenic 45.0%
TCAGAGGAAGCCAAGGAAAA+AGG - chr4_4:4566263-4566282 Msa0665170:intron 45.0%
TGTCACTGAAAAGCCGCAAT+TGG - chr4_4:4566406-4566425 Msa0665170:intron 45.0%
!! AGAAATATCGATGGCGGAAC+CGG - chr4_4:4566445-4566464 Msa0665170:intron 45.0%
TGCTGAAAAACTATCAGGGG+AGG - chr4_4:4566505-4566524 Msa0665170:intron 45.0%
TCCACAGAAAGTTGTTCCAC+CGG + chr4_4:4566608-4566627 None:intergenic 45.0%
TGTCGCTGAAAAACCCAAAG+AGG - chr4_4:4566643-4566662 Msa0665170:intron 45.0%
AGCTGATAGCAGTTACAAGC+AGG - chr4_4:4566700-4566719 Msa0665170:intron 45.0%
!! TAAAATACAATTAAAAAAAA+TGG + chr4_4:4557431-4557450 None:intergenic 5.0%
!! TGAAAAAAAATAAAAAATAT+TGG - chr4_4:4557965-4557984 Msa0665170:CDS 5.0%
!! GAAAAAAAATAAAAAATATT+GGG - chr4_4:4557966-4557985 Msa0665170:CDS 5.0%
!! AAAAAAAATAAAAAATATTG+GGG - chr4_4:4557967-4557986 Msa0665170:CDS 5.0%
!! AATTCATAAATTAAAAAAAA+TGG + chr4_4:4564296-4564315 None:intergenic 5.0%
AGTCGCTGAAGAACCGCAAT+TGG - chr4_4:4555280-4555299 Msa0665170:CDS 50.0%
CTCATTCATGAAGCAAGGGC+GGG - chr4_4:4555631-4555650 Msa0665170:CDS 50.0%
TGCTGCATGTGACGGTGTAA+AGG + chr4_4:4555712-4555731 None:intergenic 50.0%
!! GTGTAGAGTGCTGCATGTGA+CGG + chr4_4:4555720-4555739 None:intergenic 50.0%
TGTCAGTGAAGGTGGTGTGT+CGG + chr4_4:4555767-4555786 None:intergenic 50.0%
TGTGTGTGTGTCAGTGAAGG+TGG + chr4_4:4555775-4555794 None:intergenic 50.0%
AACTCTCTGCTCCTCCCAAT+TGG - chr4_4:4557359-4557378 Msa0665170:intron 50.0%
AAAAAAATGGAGGGAGGGGG+GGG + chr4_4:4557418-4557437 None:intergenic 50.0%
AGCTCGATACAGAGAGATGC+AGG + chr4_4:4558546-4558565 None:intergenic 50.0%
!! TTGAAGTGGTGGGTTGGACT+TGG - chr4_4:4558888-4558907 Msa0665170:intron 50.0%
GCTCCAACTGGAGAAGAGAT+AGG - chr4_4:4559136-4559155 Msa0665170:intron 50.0%
ATCTCCTTCAGATGAGGCCA+AGG - chr4_4:4559372-4559391 Msa0665170:intron 50.0%
TGCCGCTGAAAAACTGCATC+TGG - chr4_4:4559570-4559589 Msa0665170:intron 50.0%
GCATCTGGAAAAGCCTCAAG+TGG - chr4_4:4559585-4559604 Msa0665170:intron 50.0%
TGTCGCTGAAGAACCGCAAT+TGG - chr4_4:4559666-4559685 Msa0665170:intron 50.0%
TGCTGAAAAACTGTCAGGGG+AGG - chr4_4:4559861-4559880 Msa0665170:intron 50.0%
ACCTGTGGAGCAACTTTCTG+TGG - chr4_4:4559948-4559967 Msa0665170:intron 50.0%
TCCACAGAAAGTTGCTCCAC+AGG + chr4_4:4559952-4559971 None:intergenic 50.0%
! GCCTCCTAGATCAGGTCTTT+TGG - chr4_4:4560470-4560489 Msa0665170:intron 50.0%
AGCCACACCTCCTTGAATTG+TGG - chr4_4:4560677-4560696 Msa0665170:intron 50.0%
TGCCACAATTCAAGGAGGTG+TGG + chr4_4:4560682-4560701 None:intergenic 50.0%
GAAACTTGAGAGTAGGGCAC+AGG - chr4_4:4561367-4561386 Msa0665170:intron 50.0%
ATTGTTACTGGGGTGGGAGA+GGG + chr4_4:4561479-4561498 None:intergenic 50.0%
GCTAGTCATTGTTACTGGGG+TGG + chr4_4:4561486-4561505 None:intergenic 50.0%
!! AGATGGGCATTGGGTGGTTT+AGG + chr4_4:4562414-4562433 None:intergenic 50.0%
GTTGAAGACCGCCTCTACTA+AGG + chr4_4:4563162-4563181 None:intergenic 50.0%
!! CAGTTCAATATGGAGTGCCG+GGG + chr4_4:4565744-4565763 None:intergenic 50.0%
! CCAGTTCAATATGGAGTGCC+GGG + chr4_4:4565745-4565764 None:intergenic 50.0%
CCCAGTTCAATATGGAGTGC+CGG + chr4_4:4565746-4565765 None:intergenic 50.0%
CCGGCACTCCATATTGAACT+GGG - chr4_4:4565743-4565762 Msa0665170:intron 50.0%
CGGCACTCCATATTGAACTG+GGG - chr4_4:4565744-4565763 Msa0665170:intron 50.0%
GGCACTCCATATTGAACTGG+GGG - chr4_4:4565745-4565764 Msa0665170:intron 50.0%
GCACTCCATATTGAACTGGG+GGG - chr4_4:4565746-4565765 Msa0665170:intron 50.0%
TCGAACCCCCCAGTTCAATA+TGG + chr4_4:4565754-4565773 None:intergenic 50.0%
ATATTGAACTGGGGGGTTCG+AGG - chr4_4:4565753-4565772 Msa0665170:intron 50.0%
GGAGCAACGAAAACGATCTC+AGG + chr4_4:4566005-4566024 None:intergenic 50.0%
!! TGATGATCGCCTTGGTGTCT+TGG + chr4_4:4566123-4566142 None:intergenic 50.0%
AGACACCAAGGCGATCATCA+AGG - chr4_4:4566123-4566142 Msa0665170:intron 50.0%
AACTCCTTCAGAGGAAGCCA+AGG - chr4_4:4566256-4566275 Msa0665170:intron 50.0%
AACATCTGTGGTTGAACCGG+TGG - chr4_4:4566589-4566608 Msa0665170:intron 50.0%
ACCGGTGGAACAACTTTCTG+TGG - chr4_4:4566604-4566623 Msa0665170:intron 50.0%
! AAGGTGGTGTGTCGGTGTGT+GGG + chr4_4:4555759-4555778 None:intergenic 55.0%
AAAAAATGGAGGGAGGGGGG+GGG + chr4_4:4557417-4557436 None:intergenic 55.0%
!! AAGTGGTGGGTTGGACTTGG+TGG - chr4_4:4558891-4558910 Msa0665170:intron 55.0%
TTGTTGATCGCCTTGGCGTC+TGG + chr4_4:4559240-4559259 None:intergenic 55.0%
AGACGCCAAGGCGATCAACA+AGG - chr4_4:4559239-4559258 Msa0665170:intron 55.0%
TTTCGGAGGCTCAGCTTGTG+CGG + chr4_4:4559296-4559315 None:intergenic 55.0%
TCCTCAGGATCGGCATCACT+GGG + chr4_4:4559436-4559455 None:intergenic 55.0%
ATCCTCAGGATCGGCATCAC+TGG + chr4_4:4559437-4559456 None:intergenic 55.0%
TCAGGCGCAGAGGAAAGAGA+AGG - chr4_4:4560072-4560091 Msa0665170:intron 55.0%
CATTGTTACTGGGGTGGGAG+AGG + chr4_4:4561480-4561499 None:intergenic 55.0%
CATCAGAGGAAGACGCATGG+CGG - chr4_4:4562515-4562534 Msa0665170:intron 55.0%
CCCGGCACTCCATATTGAAC+TGG - chr4_4:4565742-4565761 Msa0665170:intron 55.0%
!! TGATCGCCTTGGTGTCTTGG+CGG + chr4_4:4566120-4566139 None:intergenic 55.0%
!!! TGCAGGTGGTGGGGTTGTTT+TGG + chr4_4:4566162-4566181 None:intergenic 55.0%
! TCCTTCGTTTTCCTCTGCGC+CGG + chr4_4:4566732-4566751 None:intergenic 55.0%
! TGTGTGGGGAGCGCGTGAAA+GGG + chr4_4:4555744-4555763 None:intergenic 60.0%
! AGGTGGTGTGTCGGTGTGTG+GGG + chr4_4:4555758-4555777 None:intergenic 60.0%
! GAAGGTGGTGTGTCGGTGTG+TGG + chr4_4:4555760-4555779 None:intergenic 60.0%
AAAAATGGAGGGAGGGGGGG+GGG + chr4_4:4557416-4557435 None:intergenic 60.0%
!!! TGCGGGTGGTGGGGTTGTTT+TGG + chr4_4:4559278-4559297 None:intergenic 60.0%
TTCGGAGGCTCAGCTTGTGC+GGG + chr4_4:4559295-4559314 None:intergenic 60.0%
TCCCAGTGATGCCGATCCTG+AGG - chr4_4:4559432-4559451 Msa0665170:intron 60.0%
!! AGGGGAGGCACCAGTTGAGT+TGG - chr4_4:4559876-4559895 Msa0665170:intron 60.0%
GCAGGAGAAATCAGGCGCAG+AGG - chr4_4:4560062-4560081 Msa0665170:intron 60.0%
CTCAGCTTGTGCAGGTGGTG+GGG + chr4_4:4566171-4566190 None:intergenic 60.0%
GCTCAGCTTGTGCAGGTGGT+GGG + chr4_4:4566172-4566191 None:intergenic 60.0%
TTCGGAGGCTCAGCTTGTGC+AGG + chr4_4:4559295-4559314 None:intergenic 60.0%
!! AGGGGAGGCACCAGTTGAGT+TGG - chr4_4:4559876-4559895 Msa0665170:intron 60.0%
TCCGGCGCAGAGGAAAACGA+AGG - chr4_4:4566728-4566747 Msa0665170:intron 60.0%
! GTGTGTGGGGAGCGCGTGAA+AGG + chr4_4:4555745-4555764 None:intergenic 65.0%
AAAATGGAGGGAGGGGGGGG+GGG + chr4_4:4557415-4557434 None:intergenic 65.0%
TGATCGCCTTGGCGTCTGGC+CGG + chr4_4:4559236-4559255 None:intergenic 65.0%
CTCAGCTTGTGCGGGTGGTG+GGG + chr4_4:4559287-4559306 None:intergenic 65.0%
GCTCAGCTTGTGCGGGTGGT+GGG + chr4_4:4559288-4559307 None:intergenic 65.0%
CAGAGGAAGACGCATGGCGG+AGG - chr4_4:4562518-4562537 Msa0665170:intron 65.0%
! AGGAAGACGCATGGCGGAGG+TGG - chr4_4:4562521-4562540 Msa0665170:intron 65.0%
! AAGACGCATGGCGGAGGTGG+CGG - chr4_4:4562524-4562543 Msa0665170:intron 65.0%
GGGGAACCGCCAAGACACCA+AGG - chr4_4:4566111-4566130 Msa0665170:intron 65.0%
GGCTCAGCTTGTGCAGGTGG+TGG + chr4_4:4566173-4566192 None:intergenic 65.0%
GGAGGCTCAGCTTGTGCAGG+TGG + chr4_4:4566176-4566195 None:intergenic 65.0%
GCAGGAGAAATCCGGCGCAG+AGG - chr4_4:4566718-4566737 Msa0665170:intron 65.0%
AAATGGAGGGAGGGGGGGGG+GGG + chr4_4:4557414-4557433 None:intergenic 70.0%
GGCTCAGCTTGTGCGGGTGG+TGG + chr4_4:4559289-4559308 None:intergenic 70.0%
GGAGGCTCAGCTTGTGCGGG+TGG + chr4_4:4559292-4559311 None:intergenic 70.0%
AATGGAGGGAGGGGGGGGGG+GGG + chr4_4:4557413-4557432 None:intergenic 75.0%
GGGGAACCGGCCAGACGCCA+AGG - chr4_4:4559227-4559246 Msa0665170:intron 75.0%
! ATGGAGGGAGGGGGGGGGGG+GGG + chr4_4:4557412-4557431 None:intergenic 80.0%
! GGGGGGGGGGGGGTGGGTGA+GGG + chr4_4:4557400-4557419 None:intergenic 85.0%
! TGGAGGGAGGGGGGGGGGGG+GGG + chr4_4:4557411-4557430 None:intergenic 85.0%
! GGGGGGGGGGGGGGTGGGTG+AGG + chr4_4:4557401-4557420 None:intergenic 90.0%
! GGAGGGGGGGGGGGGGGGGT+GGG + chr4_4:4557406-4557425 None:intergenic 90.0%
! GGAGGGAGGGGGGGGGGGGG+GGG + chr4_4:4557410-4557429 None:intergenic 90.0%
! GGGAGGGGGGGGGGGGGGGG+TGG + chr4_4:4557407-4557426 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 4555273 4566898 4555273 ID=Msa0665170;Name=Msa0665170
chr4_4 mRNA 4555273 4566898 4555273 ID=Msa0665170-mRNA-1;Parent=Msa0665170;Name=Msa0665170-mRNA-1;_AED=0.26;_eAED=0.29;_QI=0|0.12|0.11|1|0.25|0.22|9|0|630
chr4_4 exon 4566894 4566898 4566894 ID=Msa0665170-mRNA-1:exon:1535;Parent=Msa0665170-mRNA-1
chr4_4 exon 4563039 4563086 4563039 ID=Msa0665170-mRNA-1:exon:1534;Parent=Msa0665170-mRNA-1
chr4_4 exon 4562771 4563003 4562771 ID=Msa0665170-mRNA-1:exon:1533;Parent=Msa0665170-mRNA-1
chr4_4 exon 4562541 4562752 4562541 ID=Msa0665170-mRNA-1:exon:1532;Parent=Msa0665170-mRNA-1
chr4_4 exon 4562313 4562522 4562313 ID=Msa0665170-mRNA-1:exon:1531;Parent=Msa0665170-mRNA-1
chr4_4 exon 4562043 4562288 4562043 ID=Msa0665170-mRNA-1:exon:1530;Parent=Msa0665170-mRNA-1
chr4_4 exon 4557929 4558000 4557929 ID=Msa0665170-mRNA-1:exon:1529;Parent=Msa0665170-mRNA-1
chr4_4 exon 4555968 4556202 4555968 ID=Msa0665170-mRNA-1:exon:1528;Parent=Msa0665170-mRNA-1
chr4_4 exon 4555273 4555904 4555273 ID=Msa0665170-mRNA-1:exon:1527;Parent=Msa0665170-mRNA-1
chr4_4 CDS 4566894 4566898 4566894 ID=Msa0665170-mRNA-1:cds;Parent=Msa0665170-mRNA-1
chr4_4 CDS 4563039 4563086 4563039 ID=Msa0665170-mRNA-1:cds;Parent=Msa0665170-mRNA-1
chr4_4 CDS 4562771 4563003 4562771 ID=Msa0665170-mRNA-1:cds;Parent=Msa0665170-mRNA-1
chr4_4 CDS 4562541 4562752 4562541 ID=Msa0665170-mRNA-1:cds;Parent=Msa0665170-mRNA-1
chr4_4 CDS 4562313 4562522 4562313 ID=Msa0665170-mRNA-1:cds;Parent=Msa0665170-mRNA-1
chr4_4 CDS 4562043 4562288 4562043 ID=Msa0665170-mRNA-1:cds;Parent=Msa0665170-mRNA-1
chr4_4 CDS 4557929 4558000 4557929 ID=Msa0665170-mRNA-1:cds;Parent=Msa0665170-mRNA-1
chr4_4 CDS 4555968 4556202 4555968 ID=Msa0665170-mRNA-1:cds;Parent=Msa0665170-mRNA-1
chr4_4 CDS 4555273 4555904 4555273 ID=Msa0665170-mRNA-1:cds;Parent=Msa0665170-mRNA-1
Gene Sequence

>Msa0665170

ATGTATTTTTCACTAAGAAGAAAGGAACACCAAGAAAGCCTGAGATCATTTTCACAATTGAGGAAGTACCTGAATCAACATTCTGGGAATCCTGACATATCAGAGTTTGATTGGGGAACCGGCCAGACGCCAAGGCGATCAACAAGGATTAGGGAGACTGCCAAAACAACCCCACCACCCGCACAAGCTGAGCCTCCGAAAAAACGTAGTAGGAAATCATCTGGTTCAAAGAAGGATGACAAGGAAGCTGAAACTGAATCTCCTTCAGATGAGGCCAAGGAAAAGGTACTGAAAGCTGATCCCAGTGATGCCGATCCTGAGGATATTAAGCAAAGTAATGTGGAAGGTGAAACTGTGATAGCTGAGAAACCTCAAGTCGAAGAAACATCGATGGCAGAACTGAAAAAACGAATTTTTGTGCATGCTGTGAAATCTGTTGCCGCTGAAAAACTGCATCTGGAAAAGCCTCAAGTGGAAGACACTTCCATGACTGAACCGGAAACTTTGAATGCAGTTGTCGCTGAAGAACCGCAATTGGAAAATCCTCAAGTGGAAGACACATTGATGGCAAAACCAACAAAAAAACTTCTTGAGGAAGCTTCGAATGCAGCTGTCGCTGAAAAGCCGTTATTGGAAAATCCTCAGGTGGAAGAAATATCGATGGAGGAACCGGCAGAACAACTTTTTGAGAAATCTTTGGATGCTATTGCACCAGTTGAGTTGGAAACAGCTGAATTGGAAAAGCCTCAAGTGGAAGAAACATCTTTGGCAGAACCTGTGGAGCAACTTTCTGTGGAAGCTTTGAACGCTGTTGTCGCAGAAAAACCAAAAAAGGAAGCACCAATTGACTTGGGAAAAGAAAATGGTACAACTGATATCAGTTATAAGCAGGAGAAATCAGGCGCAGAGGAAAGAGAAGGAGCTGAGAAAGTGAGTCTCAATGTTGAAGATATCGGTTTTTGTTTTTCTTCTTCTGCTGAAGTCTTGTCTGTTGAACTCTCTGCTCCTTCCAATTGGAAGAAACTGTTCTTCCCTAAGAAGAAAGGAACACCAAGAAAACCTGAGATCGTTTTCGTTGCTCCAACTGGAGAAGAGATAAGTTCCAAAAGACAATTGAAGAAGTACCTGAATAACCATTCTGGGAATCCTGACATATCAGAGTTTGATTGGGGAACCGCCAAGACACCAAGGCGATCATCAAGGATTAGAGAGATTGCCAAAACAACCCCACCACCTGCACAAGCTGAGCCTCCGAAGAAACAGGAAGCCAAGGAAAAAGGAAAGTCTTCTGCTGAAGAACTGAAAGCTGATCCCAGTGATGCTGATAACGTCAATGATGAAATAAAGATTGACGATGCAGAGGTAATTAAACAAAGTAATGTGGAAGATTCGAATGCATCTGTCACTGAAAAGCCGCAATTGGAAAAGCATCAAGTGGAAGAAATATCGATGGCGGAACCGGCAGAACAACTTTTTGAGAAATCTTTGGATGCTGTTGTTGCTGAAAAACTATCAGGGGAGGCACCAGTTGAGTTGGAAAAAGAAAATAGTAAAGCTGAATTGGAAAAGCCTCAAGTGGAAGAAACATCTGTGGTTGAACCGGTGGAACAACTTTCTGTGGAAGCTTTGAACGCTGTTGTCGCTGAAAAACCCAAAGAGGAAGAACCAGTTGAATTGGAAAAGGAAAATGGTACAGCTGATAGCAGTTACAAGCAGGAGAAATCCGGCGCAGAGGAAAACGAAGGAGCTGAGAAAGTGAGTCTCAATGTTGAAGATATCATTAATGGTAAGAATGAAATTCCAGAAAGTGATGAAAAGCAAACAATTCAAGGTGATGAACAAGTGAAGAAAATGGTTGATCATGAAAGTGTTATTTGGAGCTTTGCTCAATGA

Protein sequence

>Msa0665170

MYFSLRRKEHQESLRSFSQLRKYLNQHSGNPDISEFDWGTGQTPRRSTRIRETAKTTPPPAQAEPPKKRSRKSSGSKKDDKEAETESPSDEAKEKVLKADPSDADPEDIKQSNVEGETVIAEKPQVEETSMAELKKRIFVHAVKSVAAEKLHLEKPQVEDTSMTEPETLNAVVAEEPQLENPQVEDTLMAKPTKKLLEEASNAAVAEKPLLENPQVEEISMEEPAEQLFEKSLDAIAPVELETAELEKPQVEETSLAEPVEQLSVEALNAVVAEKPKKEAPIDLGKENGTTDISYKQEKSGAEEREGAEKVSLNVEDIGFCFSSSAEVLSVELSAPSNWKKLFFPKKKGTPRKPEIVFVAPTGEEISSKRQLKKYLNNHSGNPDISEFDWGTAKTPRRSSRIREIAKTTPPPAQAEPPKKQEAKEKGKSSAEELKADPSDADNVNDEIKIDDAEVIKQSNVEDSNASVTEKPQLEKHQVEEISMAEPAEQLFEKSLDAVVAEKLSGEAPVELEKENSKAELEKPQVEETSVVEPVEQLSVEALNAVVAEKPKEEEPVELEKENGTADSSYKQEKSGAEENEGAEKVSLNVEDIINGKNEIPESDEKQTIQGDEQVKKMVDHESVIWSFAQ*