Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0276630 | XP_003595238.1 | 98.966 | 290 | 3 | 0 | 4 | 293 | 133 | 422 | 0.0 | 595 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0276630 | sp|Q9LTR9|NMT1_ARATH | 84.828 | 290 | 44 | 0 | 4 | 293 | 145 | 434 | 0.0 | 525 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0276630 | A2Q693 | 98.966 | 290 | 3 | 0 | 4 | 293 | 133 | 422 | 0.0 | 595 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0276630 | 0.807362 | 5.246747e-50 | -8.615850e-47 |
| Msa0006110 | Msa0276630 | 0.828758 | 7.524691e-55 | -8.615850e-47 |
| Msa0011660 | Msa0276630 | -0.847973 | 8.236520e-60 | -8.615850e-47 |
| Msa0015390 | Msa0276630 | 0.811966 | 5.375183e-51 | -8.615850e-47 |
| Msa0017510 | Msa0276630 | 0.822435 | 2.372094e-53 | -8.615850e-47 |
| Msa0020430 | Msa0276630 | 0.810152 | 1.328786e-50 | -8.615850e-47 |
| Msa0024210 | Msa0276630 | -0.816130 | 6.481879e-52 | -8.615850e-47 |
| Msa0037880 | Msa0276630 | 0.804387 | 2.213739e-49 | -8.615850e-47 |
| Msa0040620 | Msa0276630 | 0.809681 | 1.677896e-50 | -8.615850e-47 |
| Msa0044000 | Msa0276630 | 0.805919 | 1.057691e-49 | -8.615850e-47 |
| Msa0050390 | Msa0276630 | 0.806940 | 6.443933e-50 | -8.615850e-47 |
| Msa0051020 | Msa0276630 | 0.800665 | 1.295250e-48 | -8.615850e-47 |
| Msa0051630 | Msa0276630 | 0.800305 | 1.533956e-48 | -8.615850e-47 |
| Msa0051750 | Msa0276630 | 0.805348 | 1.394337e-49 | -8.615850e-47 |
| Msa0054480 | Msa0276630 | 0.809697 | 1.664541e-50 | -8.615850e-47 |
| Msa0059110 | Msa0276630 | 0.803925 | 2.762757e-49 | -8.615850e-47 |
| Msa0061080 | Msa0276630 | 0.806211 | 9.185077e-50 | -8.615850e-47 |
| Msa0071380 | Msa0276630 | -0.829146 | 6.060864e-55 | -8.615850e-47 |
| Msa0075470 | Msa0276630 | 0.817595 | 3.039410e-52 | -8.615850e-47 |
| Msa0090360 | Msa0276630 | 0.809746 | 1.624995e-50 | -8.615850e-47 |
| Msa0090570 | Msa0276630 | 0.801578 | 8.428419e-49 | -8.615850e-47 |
| Msa0101270 | Msa0276630 | 0.812923 | 3.319601e-51 | -8.615850e-47 |
| Msa0104800 | Msa0276630 | 0.804746 | 1.863070e-49 | -8.615850e-47 |
| Msa0105520 | Msa0276630 | 0.804266 | 2.346185e-49 | -8.615850e-47 |
| Msa0112770 | Msa0276630 | 0.808943 | 2.415586e-50 | -8.615850e-47 |
| Msa0120010 | Msa0276630 | -0.827212 | 1.772540e-54 | -8.615850e-47 |
| Msa0120020 | Msa0276630 | -0.821490 | 3.928325e-53 | -8.615850e-47 |
| Msa0127800 | Msa0276630 | 0.810693 | 1.015081e-50 | -8.615850e-47 |
| Msa0138500 | Msa0276630 | 0.816298 | 5.944768e-52 | -8.615850e-47 |
| Msa0138520 | Msa0276630 | 0.814429 | 1.547581e-51 | -8.615850e-47 |
| Msa0145580 | Msa0276630 | 0.808023 | 3.795949e-50 | -8.615850e-47 |
| Msa0150800 | Msa0276630 | 0.800175 | 1.630447e-48 | -8.615850e-47 |
| Msa0151180 | Msa0276630 | 0.802949 | 4.400777e-49 | -8.615850e-47 |
| Msa0157290 | Msa0276630 | 0.822671 | 2.090818e-53 | -8.615850e-47 |
| Msa0171540 | Msa0276630 | 0.808132 | 3.599449e-50 | -8.615850e-47 |
| Msa0173070 | Msa0276630 | 0.806806 | 6.878026e-50 | -8.615850e-47 |
| Msa0180500 | Msa0276630 | 0.816836 | 4.503179e-52 | -8.615850e-47 |
| Msa0184040 | Msa0276630 | 0.805818 | 1.110774e-49 | -8.615850e-47 |
| Msa0205510 | Msa0276630 | 0.821232 | 4.503659e-53 | -8.615850e-47 |
| Msa0206010 | Msa0276630 | 0.809304 | 2.021494e-50 | -8.615850e-47 |
| Msa0212930 | Msa0276630 | 0.800827 | 1.200778e-48 | -8.615850e-47 |
| Msa0212990 | Msa0276630 | 0.802290 | 6.017570e-49 | -8.615850e-47 |
| Msa0215320 | Msa0276630 | -0.814645 | 1.386671e-51 | -8.615850e-47 |
| Msa0218810 | Msa0276630 | 0.811727 | 6.058484e-51 | -8.615850e-47 |
| Msa0228070 | Msa0276630 | 0.826309 | 2.911476e-54 | -8.615850e-47 |
| Msa0231980 | Msa0276630 | 0.812721 | 3.677051e-51 | -8.615850e-47 |
| Msa0245650 | Msa0276630 | 0.867545 | 1.264900e-65 | -8.615850e-47 |
| Msa0245940 | Msa0276630 | 0.820297 | 7.387871e-53 | -8.615850e-47 |
| Msa0253200 | Msa0276630 | 0.809313 | 2.012697e-50 | -8.615850e-47 |
| Msa0259370 | Msa0276630 | 0.807979 | 3.878410e-50 | -8.615850e-47 |
| Msa0259500 | Msa0276630 | 0.804206 | 2.413988e-49 | -8.615850e-47 |
| Msa0264150 | Msa0276630 | 0.807579 | 4.718710e-50 | -8.615850e-47 |
| Msa0271530 | Msa0276630 | 0.822595 | 2.177316e-53 | -8.615850e-47 |
| Msa0276630 | Msa0284520 | 0.818766 | 1.651213e-52 | -8.615850e-47 |
| Msa0276630 | Msa0287410 | 0.808208 | 3.467724e-50 | -8.615850e-47 |
| Msa0276630 | Msa0288080 | 0.836698 | 8.031934e-57 | -8.615850e-47 |
| Msa0276630 | Msa0292030 | 0.813078 | 3.071009e-51 | -8.615850e-47 |
| Msa0276630 | Msa0317520 | 0.804258 | 2.355235e-49 | -8.615850e-47 |
| Msa0276630 | Msa0319170 | 0.818668 | 1.738219e-52 | -8.615850e-47 |
| Msa0276630 | Msa0326110 | 0.814621 | 1.403721e-51 | -8.615850e-47 |
| Msa0276630 | Msa0326480 | 0.804676 | 1.926935e-49 | -8.615850e-47 |
| Msa0276630 | Msa0334360 | 0.803491 | 3.398310e-49 | -8.615850e-47 |
| Msa0276630 | Msa0336320 | 0.804518 | 2.078579e-49 | -8.615850e-47 |
| Msa0276630 | Msa0341540 | 0.818878 | 1.557185e-52 | -8.615850e-47 |
| Msa0276630 | Msa0357900 | 0.807149 | 5.821090e-50 | -8.615850e-47 |
| Msa0276630 | Msa0359030 | 0.834283 | 3.277993e-56 | -8.615850e-47 |
| Msa0276630 | Msa0381610 | -0.800419 | 1.453998e-48 | -8.615850e-47 |
| Msa0276630 | Msa0385840 | 0.801401 | 9.164304e-49 | -8.615850e-47 |
| Msa0276630 | Msa0395790 | 0.816638 | 4.988159e-52 | -8.615850e-47 |
| Msa0276630 | Msa0395820 | 0.820764 | 5.772604e-53 | -8.615850e-47 |
| Msa0276630 | Msa0401560 | 0.803168 | 3.964296e-49 | -8.615850e-47 |
| Msa0276630 | Msa0402790 | 0.824239 | 8.988267e-54 | -8.615850e-47 |
| Msa0276630 | Msa0405370 | 0.805263 | 1.452772e-49 | -8.615850e-47 |
| Msa0276630 | Msa0477130 | -0.806127 | 9.563585e-50 | -8.615850e-47 |
| Msa0276630 | Msa0489100 | 0.814913 | 1.209320e-51 | -8.615850e-47 |
| Msa0276630 | Msa0495330 | 0.807477 | 4.958219e-50 | -8.615850e-47 |
| Msa0276630 | Msa0498650 | 0.807311 | 5.379140e-50 | -8.615850e-47 |
| Msa0276630 | Msa0504210 | 0.801930 | 7.136822e-49 | -8.615850e-47 |
| Msa0276630 | Msa0523940 | 0.810784 | 9.705429e-51 | -8.615850e-47 |
| Msa0276630 | Msa0529040 | 0.800075 | 1.708119e-48 | -8.615850e-47 |
| Msa0276630 | Msa0529890 | 0.806377 | 8.474881e-50 | -8.615850e-47 |
| Msa0276630 | Msa0539530 | -0.818325 | 2.078685e-52 | -8.615850e-47 |
| Msa0276630 | Msa0542290 | 0.802487 | 5.482214e-49 | -8.615850e-47 |
| Msa0276630 | Msa0545700 | 0.803374 | 3.594076e-49 | -8.615850e-47 |
| Msa0276630 | Msa0547320 | 0.814207 | 1.732359e-51 | -8.615850e-47 |
| Msa0276630 | Msa0556060 | 0.803018 | 4.258312e-49 | -8.615850e-47 |
| Msa0276630 | Msa0571130 | 0.807538 | 4.813861e-50 | -8.615850e-47 |
| Msa0276630 | Msa0585560 | 0.802112 | 6.548708e-49 | -8.615850e-47 |
| Msa0276630 | Msa0592440 | 0.822539 | 2.244467e-53 | -8.615850e-47 |
| Msa0276630 | Msa0610430 | 0.824808 | 6.603436e-54 | -8.615850e-47 |
| Msa0276630 | Msa0613440 | 0.829384 | 5.306407e-55 | -8.615850e-47 |
| Msa0276630 | Msa0632740 | 0.801830 | 7.482266e-49 | -8.615850e-47 |
| Msa0276630 | Msa0663390 | 0.801073 | 1.069229e-48 | -8.615850e-47 |
| Msa0276630 | Msa0663810 | 0.804689 | 1.914492e-49 | -8.615850e-47 |
| Msa0276630 | Msa0692040 | -0.838693 | 2.471025e-57 | -8.615850e-47 |
| Msa0276630 | Msa0705190 | 0.806672 | 7.341192e-50 | -8.615850e-47 |
| Msa0276630 | Msa0715700 | 0.800839 | 1.194032e-48 | -8.615850e-47 |
| Msa0276630 | Msa0721280 | 0.817816 | 2.709436e-52 | -8.615850e-47 |
| Msa0276630 | Msa0722020 | 0.809405 | 1.923542e-50 | -8.615850e-47 |
| Msa0276630 | Msa0729720 | 0.805810 | 1.115432e-49 | -8.615850e-47 |
| Msa0276630 | Msa0731940 | 0.831062 | 2.065561e-55 | -8.615850e-47 |
| Msa0276630 | Msa0743720 | 0.807014 | 6.216314e-50 | -8.615850e-47 |
| Msa0276630 | Msa0749290 | 0.826460 | 2.679652e-54 | -8.615850e-47 |
| Msa0276630 | Msa0756460 | 0.815047 | 1.128929e-51 | -8.615850e-47 |
| Msa0276630 | Msa0762970 | 0.814923 | 1.203344e-51 | -8.615850e-47 |
| Msa0276630 | Msa0770080 | 0.819582 | 1.076793e-52 | -8.615850e-47 |
| Msa0276630 | Msa0777570 | -0.815356 | 9.640150e-52 | -8.615850e-47 |
| Msa0276630 | Msa0793800 | 0.826232 | 3.036386e-54 | -8.615850e-47 |
| Msa0276630 | Msa0794730 | 0.801668 | 8.076914e-49 | -8.615850e-47 |
| Msa0276630 | Msa0808080 | 0.823903 | 1.077843e-53 | -8.615850e-47 |
| Msa0276630 | Msa0810220 | 0.837600 | 4.724202e-57 | -8.615850e-47 |
| Msa0276630 | Msa0816710 | 0.807070 | 6.048058e-50 | -8.615850e-47 |
| Msa0276630 | Msa0820850 | 0.819613 | 1.059212e-52 | -8.615850e-47 |
| Msa0276630 | Msa0832340 | 0.819222 | 1.300958e-52 | -8.615850e-47 |
| Msa0276630 | Msa0844450 | 0.805965 | 1.034745e-49 | -8.615850e-47 |
| Msa0276630 | Msa0844490 | 0.826703 | 2.345079e-54 | -8.615850e-47 |
| Msa0276630 | Msa0849030 | 0.829105 | 6.199964e-55 | -8.615850e-47 |
| Msa0276630 | Msa0849100 | 0.818754 | 1.661593e-52 | -8.615850e-47 |
| Msa0276630 | Msa0861130 | 0.814929 | 1.199485e-51 | -8.615850e-47 |
| Msa0276630 | Msa0861930 | 0.807690 | 4.469016e-50 | -8.615850e-47 |
| Msa0276630 | Msa0876580 | 0.803823 | 2.900696e-49 | -8.615850e-47 |
| Msa0276630 | Msa0880140 | 0.819444 | 1.157971e-52 | -8.615850e-47 |
| Msa0276630 | Msa0893950 | 0.807609 | 4.648828e-50 | -8.615850e-47 |
| Msa0276630 | Msa0897330 | 0.811318 | 7.432558e-51 | -8.615850e-47 |
| Msa0276630 | Msa0933100 | 0.839577 | 1.457840e-57 | -8.615850e-47 |
| Msa0276630 | Msa0936390 | 0.805922 | 1.056530e-49 | -8.615850e-47 |
| Msa0276630 | Msa0947660 | 0.805136 | 1.544440e-49 | -8.615850e-47 |
| Msa0276630 | Msa0966750 | 0.803945 | 2.735734e-49 | -8.615850e-47 |
| Msa0276630 | Msa0969520 | 0.830662 | 2.588459e-55 | -8.615850e-47 |
| Msa0276630 | Msa0969810 | 0.807098 | 5.965338e-50 | -8.615850e-47 |
| Msa0276630 | Msa0973100 | 0.802069 | 6.682231e-49 | -8.615850e-47 |
| Msa0276630 | Msa0974070 | 0.838724 | 2.425813e-57 | -8.615850e-47 |
| Msa0276630 | Msa1030970 | 0.817190 | 3.748969e-52 | -8.615850e-47 |
| Msa0276630 | Msa1036610 | 0.816879 | 4.405419e-52 | -8.615850e-47 |
| Msa0276630 | Msa1048160 | 0.808921 | 2.441715e-50 | -8.615850e-47 |
| Msa0276630 | Msa1068870 | 0.808668 | 2.766397e-50 | -8.615850e-47 |
| Msa0276630 | Msa1075540 | 0.820607 | 6.273268e-53 | -8.615850e-47 |
| Msa0276630 | Msa1078420 | 0.809228 | 2.099437e-50 | -8.615850e-47 |
| Msa0276630 | Msa1081930 | 0.806355 | 8.563563e-50 | -8.615850e-47 |
| Msa0276630 | Msa1085200 | 0.802946 | 4.406580e-49 | -8.615850e-47 |
| Msa0276630 | Msa1100050 | 0.822873 | 1.876480e-53 | -8.615850e-47 |
| Msa0276630 | Msa1109680 | 0.819321 | 1.235071e-52 | -8.615850e-47 |
| Msa0276630 | Msa1113170 | 0.824068 | 9.862265e-54 | -8.615850e-47 |
| Msa0276630 | Msa1119480 | 0.816538 | 5.251243e-52 | -8.615850e-47 |
| Msa0276630 | Msa1121490 | 0.807304 | 5.396771e-50 | -8.615850e-47 |
| Msa0276630 | Msa1123380 | 0.832598 | 8.627616e-56 | -8.615850e-47 |
| Msa0276630 | Msa1128600 | 0.803397 | 3.554456e-49 | -8.615850e-47 |
| Msa0276630 | Msa1135470 | 0.829152 | 6.039554e-55 | -8.615850e-47 |
| Msa0276630 | Msa1137570 | 0.845840 | 3.160454e-59 | -8.615850e-47 |
| Msa0276630 | Msa1162780 | 0.800705 | 1.271482e-48 | -8.615850e-47 |
| Msa0276630 | Msa1167340 | 0.800766 | 1.235447e-48 | -8.615850e-47 |
| Msa0276630 | Msa1169530 | 0.817684 | 2.901641e-52 | -8.615850e-47 |
| Msa0276630 | Msa1169550 | 0.839220 | 1.805220e-57 | -8.615850e-47 |
| Msa0276630 | Msa1173100 | 0.802615 | 5.157777e-49 | -8.615850e-47 |
| Msa0276630 | Msa1189070 | 0.811599 | 6.459687e-51 | -8.615850e-47 |
| Msa0276630 | Msa1190920 | 0.806310 | 8.751718e-50 | -8.615850e-47 |
| Msa0276630 | Msa1193290 | 0.840079 | 1.079248e-57 | -8.615850e-47 |
| Msa0276630 | Msa1212940 | 0.802363 | 5.812367e-49 | -8.615850e-47 |
| Msa0276630 | Msa1212950 | 0.812835 | 3.470337e-51 | -8.615850e-47 |
| Msa0276630 | Msa1232740 | 0.809212 | 2.116109e-50 | -8.615850e-47 |
| Msa0276630 | Msa1237980 | 0.819279 | 1.262329e-52 | -8.615850e-47 |
| Msa0276630 | Msa1245930 | 0.805997 | 1.018506e-49 | -8.615850e-47 |
| Msa0276630 | Msa1253020 | 0.833594 | 4.875360e-56 | -8.615850e-47 |
| Msa0276630 | Msa1262210 | 0.800104 | 1.685752e-48 | -8.615850e-47 |
| Msa0276630 | Msa1277660 | 0.830457 | 2.905088e-55 | -8.615850e-47 |
| Msa0276630 | Msa1282580 | -0.803455 | 3.457378e-49 | -8.615850e-47 |
| Msa0276630 | Msa1284550 | 0.815750 | 7.875794e-52 | -8.615850e-47 |
| Msa0276630 | Msa1284680 | 0.815098 | 1.100126e-51 | -8.615850e-47 |
| Msa0276630 | Msa1286800 | 0.828891 | 6.986158e-55 | -8.615850e-47 |
| Msa0276630 | Msa1287190 | 0.809135 | 2.197733e-50 | -8.615850e-47 |
| Msa0276630 | Msa1298510 | 0.807672 | 4.508046e-50 | -8.615850e-47 |
| Msa0276630 | Msa1299180 | -0.804530 | 2.066662e-49 | -8.615850e-47 |
| Msa0276630 | Msa1299950 | 0.824461 | 7.972842e-54 | -8.615850e-47 |
| Msa0276630 | Msa1303250 | 0.801020 | 1.096287e-48 | -8.615850e-47 |
| Msa0276630 | Msa1306850 | 0.819430 | 1.166032e-52 | -8.615850e-47 |
| Msa0276630 | Msa1313320 | 0.811782 | 5.893438e-51 | -8.615850e-47 |
| Msa0276630 | Msa1345220 | 0.802812 | 4.696609e-49 | -8.615850e-47 |
| Msa0276630 | Msa1353470 | 0.848868 | 4.657937e-60 | -8.615850e-47 |
| Msa0276630 | Msa1357890 | 0.817987 | 2.479007e-52 | -8.615850e-47 |
| Msa0276630 | Msa1359040 | 0.814937 | 1.194438e-51 | -8.615850e-47 |
| Msa0276630 | Msa1360440 | 0.804633 | 1.967048e-49 | -8.615850e-47 |
| Msa0276630 | Msa1370070 | -0.827941 | 1.184559e-54 | -8.615850e-47 |
| Msa0276630 | Msa1374470 | 0.806571 | 7.711769e-50 | -8.615850e-47 |
| Msa0276630 | Msa1392780 | 0.801705 | 7.938461e-49 | -8.615850e-47 |
| Msa0276630 | Msa1398090 | 0.814111 | 1.819041e-51 | -8.615850e-47 |
| Msa0276630 | Msa1409880 | 0.800354 | 1.499223e-48 | -8.615850e-47 |
| Msa0276630 | Msa1415910 | 0.821394 | 4.132363e-53 | -8.615850e-47 |
| Msa0276630 | Msa1433390 | 0.803219 | 3.869112e-49 | -8.615850e-47 |
| Msa0276630 | Msa1451160 | 0.808991 | 2.358803e-50 | -8.615850e-47 |
| Msa0276630 | Msa1451550 | 0.801962 | 7.028842e-49 | -8.615850e-47 |
| Msa0276630 | Msa1459270 | 0.810148 | 1.331527e-50 | -8.615850e-47 |
| Msa0276630 | Msa1466540 | 0.830969 | 2.176791e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0276630 | MtrunA17_Chr2g0299701 | 98.966 | 290 | 3 | 0 | 4 | 293 | 133 | 422 | 0.0 | 595 |
| Msa0276630 | MtrunA17_Chr4g0039421 | 87.197 | 289 | 37 | 0 | 5 | 293 | 173 | 461 | 0.0 | 533 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0276630 | AT5G57020.1 | 84.828 | 290 | 44 | 0 | 4 | 293 | 145 | 434 | 0.0 | 525 |
Find 76 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTACTACTTGTACAATTAT+AGG | 0.187773 | 2_3:-8903809 | Msa0276630:CDS |
| CTACTACTTGTACAATTATA+GGG | 0.243214 | 2_3:-8903808 | Msa0276630:CDS |
| GAGGTTGCTTAGGGGTTATT+TGG | 0.244842 | 2_3:-8904186 | Msa0276630:CDS |
| CGACGGTTACGGAAGGGTTT+AGG | 0.250570 | 2_3:-8904241 | Msa0276630:CDS |
| TACGGAAGGGTTTAGGAAAA+TGG | 0.258903 | 2_3:-8904234 | Msa0276630:CDS |
| GCTTGCGCCGGTTATGATTA+AGG | 0.262713 | 2_3:-8904462 | Msa0276630:CDS |
| GGGTTCATTTGGAGGATATT+TGG | 0.264507 | 2_3:-8904427 | Msa0276630:CDS |
| ACATTGCCTAGTTCTATTCT+TGG | 0.273116 | 2_3:-8904029 | Msa0276630:CDS |
| CTGGGATACCGGCGAGGATT+AGG | 0.277817 | 2_3:-8904556 | Msa0276630:CDS |
| GGCGAAAGATTCGAAGAAAT+TGG | 0.291934 | 2_3:-8904591 | Msa0276630:CDS |
| GACTTGGCATATTGGTGTTC+GGG | 0.312724 | 2_3:-8904612 | Msa0276630:CDS |
| AGTTACTAGGAGGGTTCATT+TGG | 0.331531 | 2_3:-8904438 | Msa0276630:CDS |
| TATTTGGCAAGCGGCTTATA+CGG | 0.332061 | 2_3:-8904411 | Msa0276630:CDS |
| CTGCGGTCACGAGGTTGCTT+AGG | 0.332812 | 2_3:-8904196 | Msa0276630:CDS |
| TTTCTTAAAGAGCTCAAGTT+TGG | 0.336531 | 2_3:-8903852 | Msa0276630:CDS |
| TGCGGTCACGAGGTTGCTTA+GGG | 0.347812 | 2_3:-8904195 | Msa0276630:CDS |
| AGACTTGGCATATTGGTGTT+CGG | 0.351910 | 2_3:-8904613 | Msa0276630:CDS |
| CCTTCCGTAACCGTCGAATC+AGG | 0.381842 | 2_3:+8904248 | None:intergenic |
| TGGCAAGCGGCTTATACGGC+TGG | 0.395105 | 2_3:-8904407 | Msa0276630:CDS |
| CGAAGAAGCTTATTGATGTT+GGG | 0.396227 | 2_3:-8904328 | Msa0276630:CDS |
| GTTGCCTGATTCGACGGTTA+CGG | 0.397086 | 2_3:-8904252 | Msa0276630:CDS |
| AGGTTGCTTAGGGGTTATTT+GGG | 0.402043 | 2_3:-8904185 | Msa0276630:CDS |
| CCAACATCAATAAGCTTCTT+CGG | 0.404437 | 2_3:+8904329 | None:intergenic |
| CCGAAGAAGCTTATTGATGT+TGG | 0.404989 | 2_3:-8904329 | Msa0276630:CDS |
| TGGGATACCGGCGAGGATTA+GGG | 0.413697 | 2_3:-8904555 | Msa0276630:CDS |
| GAGGATTAGGGTTAATGATA+AGG | 0.416957 | 2_3:-8904543 | Msa0276630:CDS |
| GTAACTTCCTTAATCATAAC+CGG | 0.427575 | 2_3:+8904455 | None:intergenic |
| TAATGATAAGGTTGTTAGAA+TGG | 0.450619 | 2_3:-8904531 | Msa0276630:CDS |
| ACATCATCTTCATCGAAATC+AGG | 0.458994 | 2_3:+8904146 | None:intergenic |
| TACTAGGAGGGTTCATTTGG+AGG | 0.460185 | 2_3:-8904435 | Msa0276630:CDS |
| GGCAAGCGGCTTATACGGCT+GGG | 0.466156 | 2_3:-8904406 | Msa0276630:CDS |
| GCCAAGTTCAGATGGTTTCA+AGG | 0.468825 | 2_3:+8903776 | None:intergenic |
| TGTGTGTGCATAAGAGACTT+AGG | 0.485952 | 2_3:-8904493 | Msa0276630:CDS |
| GCCTTGAAACCATCTGAACT+TGG | 0.488519 | 2_3:-8903777 | Msa0276630:CDS |
| GGATGTTGTGGATAGTTACT+TGG | 0.502857 | 2_3:-8904099 | Msa0276630:CDS |
| CGGTTGCTACTTGTCAGTAT+TGG | 0.504031 | 2_3:-8904367 | Msa0276630:CDS |
| CAATACTGACAAGTAGCAAC+CGG | 0.508494 | 2_3:+8904368 | None:intergenic |
| CTCAAGTTTGGACCTGGAGA+TGG | 0.512822 | 2_3:-8903840 | Msa0276630:CDS |
| TGCTTATTCTTATTATAATG+TGG | 0.519646 | 2_3:-8903979 | Msa0276630:CDS |
| TTATGATTAAGGAAGTTACT+AGG | 0.529772 | 2_3:-8904451 | Msa0276630:CDS |
| TAGTGAAGCTGTCCATCTCC+AGG | 0.536498 | 2_3:+8903828 | None:intergenic |
| CCTGATTCGACGGTTACGGA+AGG | 0.537314 | 2_3:-8904248 | Msa0276630:CDS |
| AGCACAAGGCCAAGTTCAGA+TGG | 0.537982 | 2_3:+8903768 | None:intergenic |
| TTATAAGTTGCCTGATTCGA+CGG | 0.543667 | 2_3:-8904258 | Msa0276630:CDS |
| TGGGGTTGTGCTACCGACTC+CGG | 0.545234 | 2_3:-8904387 | Msa0276630:CDS |
| CTACTTGTCAGTATTGGCAT+AGG | 0.554525 | 2_3:-8904361 | Msa0276630:CDS |
| CTGATTCGACGGTTACGGAA+GGG | 0.563808 | 2_3:-8904247 | Msa0276630:CDS |
| GCTTCCACATGAGGATGTTG+TGG | 0.582029 | 2_3:-8904111 | Msa0276630:CDS |
| GATTAAGGAAGTTACTAGGA+GGG | 0.582320 | 2_3:-8904447 | Msa0276630:CDS |
| TGTGGTTACTAAAACTCCGT+TGG | 0.584486 | 2_3:-8903961 | Msa0276630:CDS |
| AAAGAGCTCAAGTTTGGACC+TGG | 0.586615 | 2_3:-8903846 | Msa0276630:CDS |
| GTTTAGGAAAATGGAGCTGA+GGG | 0.589117 | 2_3:-8904225 | Msa0276630:CDS |
| ACTGATTGTGGCGAAGCAGA+AGG | 0.590436 | 2_3:-8903919 | Msa0276630:CDS |
| CTAAGCAACCTCGTGACCGC+AGG | 0.591924 | 2_3:+8904197 | None:intergenic |
| TAGGTCGAAGAGGCTTGCGC+CGG | 0.593908 | 2_3:-8904474 | Msa0276630:CDS |
| GCAAGCGGCTTATACGGCTG+GGG | 0.596260 | 2_3:-8904405 | Msa0276630:CDS |
| TCGTTCATCAACTGAGCCAA+CGG | 0.597133 | 2_3:+8903945 | None:intergenic |
| ATGAAGATGATGTTGAGCAT+TGG | 0.598843 | 2_3:-8904136 | Msa0276630:CDS |
| TGATTTCCAAGAATAGAACT+AGG | 0.599510 | 2_3:+8904023 | None:intergenic |
| TTTGGAGGATATTTGGCAAG+CGG | 0.599542 | 2_3:-8904420 | Msa0276630:CDS |
| TCATTAACCCTAATCCTCGC+CGG | 0.602086 | 2_3:+8904548 | None:intergenic |
| GCATTGGCTGCTTCCACATG+AGG | 0.607953 | 2_3:-8904120 | Msa0276630:CDS |
| GGTTTAGGAAAATGGAGCTG+AGG | 0.608661 | 2_3:-8904226 | Msa0276630:CDS |
| TGATTAAGGAAGTTACTAGG+AGG | 0.614018 | 2_3:-8904448 | Msa0276630:CDS |
| GTGCGAGGATGACAATGAGT+AGG | 0.621294 | 2_3:-8904292 | Msa0276630:CDS |
| TGACAAGTAGCAACCGGAGT+CGG | 0.626237 | 2_3:+8904374 | None:intergenic |
| GGGATGTTCCTGCGGTCACG+AGG | 0.628512 | 2_3:-8904205 | Msa0276630:CDS |
| GATGAACGATGCACTGATTG+TGG | 0.628611 | 2_3:-8903931 | Msa0276630:CDS |
| GCGGTCACGAGGTTGCTTAG+GGG | 0.641576 | 2_3:-8904194 | Msa0276630:CDS |
| CTATCCACAACATCCTCATG+TGG | 0.651247 | 2_3:+8904107 | None:intergenic |
| TTATTACTGGGATACCGGCG+AGG | 0.656725 | 2_3:-8904562 | Msa0276630:CDS |
| ATAAGAGACTTAGGTCGAAG+AGG | 0.667868 | 2_3:-8904484 | Msa0276630:CDS |
| GGAGCTGAGGGATGTTCCTG+CGG | 0.669753 | 2_3:-8904213 | Msa0276630:CDS |
| TCAGAGACTACAAGAGCACA+AGG | 0.684761 | 2_3:+8903754 | None:intergenic |
| TTGGATGTAATGCATAACGA+GGG | 0.690270 | 2_3:-8903876 | Msa0276630:CDS |
| GTTGGATGTAATGCATAACG+AGG | 0.704192 | 2_3:-8903877 | Msa0276630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGCTTATTCTTATTATAATG+TGG | - | chr2_3:8904424-8904443 | Msa0276630:CDS | 20.0% |
| !! | TGCTTATTCTTATTATAATG+TGG | - | chr2_3:8904424-8904443 | Msa0276630:CDS | 20.0% |
| !!! | TATTTTAAGACTTGGCATAT+TGG | - | chr2_3:8903783-8903802 | Msa0276630:CDS | 25.0% |
| !!! | AAATTGGTTGCTTTTATTAC+TGG | - | chr2_3:8903828-8903847 | Msa0276630:CDS | 25.0% |
| !!! | AATTGGTTGCTTTTATTACT+GGG | - | chr2_3:8903829-8903848 | Msa0276630:CDS | 25.0% |
| ! | TAATGATAAGGTTGTTAGAA+TGG | - | chr2_3:8903872-8903891 | Msa0276630:CDS | 25.0% |
| ! | TTATGATTAAGGAAGTTACT+AGG | - | chr2_3:8903952-8903971 | Msa0276630:CDS | 25.0% |
| ! | TACAAAAATCAGTAATCTCA+TGG | + | chr2_3:8904346-8904365 | None:intergenic | 25.0% |
| ! | ACTACTACTTGTACAATTAT+AGG | - | chr2_3:8904594-8904613 | Msa0276630:CDS | 25.0% |
| ! | CTACTACTTGTACAATTATA+GGG | - | chr2_3:8904595-8904614 | Msa0276630:CDS | 25.0% |
| !!! | TATTTTAAGACTTGGCATAT+TGG | - | chr2_3:8903783-8903802 | Msa0276630:CDS | 25.0% |
| !!! | AAATTGGTTGCTTTTATTAC+TGG | - | chr2_3:8903828-8903847 | Msa0276630:CDS | 25.0% |
| !!! | AATTGGTTGCTTTTATTACT+GGG | - | chr2_3:8903829-8903848 | Msa0276630:CDS | 25.0% |
| ! | TAATGATAAGGTTGTTAGAA+TGG | - | chr2_3:8903872-8903891 | Msa0276630:CDS | 25.0% |
| ! | TTATGATTAAGGAAGTTACT+AGG | - | chr2_3:8903952-8903971 | Msa0276630:CDS | 25.0% |
| ! | TACAAAAATCAGTAATCTCA+TGG | + | chr2_3:8904346-8904365 | None:intergenic | 25.0% |
| ! | ACTACTACTTGTACAATTAT+AGG | - | chr2_3:8904594-8904613 | Msa0276630:CDS | 25.0% |
| ! | CTACTACTTGTACAATTATA+GGG | - | chr2_3:8904595-8904614 | Msa0276630:CDS | 25.0% |
| GTAACTTCCTTAATCATAAC+CGG | + | chr2_3:8903951-8903970 | None:intergenic | 30.0% | |
| ! | TTATTGATGTTGGGTTTTCA+AGG | - | chr2_3:8904084-8904103 | Msa0276630:CDS | 30.0% |
| TGATTTCCAAGAATAGAACT+AGG | + | chr2_3:8904383-8904402 | None:intergenic | 30.0% | |
| TTTCTTAAAGAGCTCAAGTT+TGG | - | chr2_3:8904551-8904570 | Msa0276630:CDS | 30.0% | |
| GTAACTTCCTTAATCATAAC+CGG | + | chr2_3:8903951-8903970 | None:intergenic | 30.0% | |
| ! | TTATTGATGTTGGGTTTTCA+AGG | - | chr2_3:8904084-8904103 | Msa0276630:CDS | 30.0% |
| TGATTTCCAAGAATAGAACT+AGG | + | chr2_3:8904383-8904402 | None:intergenic | 30.0% | |
| TTTCTTAAAGAGCTCAAGTT+TGG | - | chr2_3:8904551-8904570 | Msa0276630:CDS | 30.0% | |
| !!! | TTCCTGGGTATTTTAAGACT+TGG | - | chr2_3:8903775-8903794 | Msa0276630:CDS | 35.0% |
| ! | TGCTTTTATTACTGGGATAC+CGG | - | chr2_3:8903836-8903855 | Msa0276630:CDS | 35.0% |
| GAGGATTAGGGTTAATGATA+AGG | - | chr2_3:8903860-8903879 | Msa0276630:CDS | 35.0% | |
| TGATTAAGGAAGTTACTAGG+AGG | - | chr2_3:8903955-8903974 | Msa0276630:CDS | 35.0% | |
| GATTAAGGAAGTTACTAGGA+GGG | - | chr2_3:8903956-8903975 | Msa0276630:CDS | 35.0% | |
| CCAACATCAATAAGCTTCTT+CGG | + | chr2_3:8904077-8904096 | None:intergenic | 35.0% | |
| CGAAGAAGCTTATTGATGTT+GGG | - | chr2_3:8904075-8904094 | Msa0276630:CDS | 35.0% | |
| ! | TTATAAGTTGCCTGATTCGA+CGG | - | chr2_3:8904145-8904164 | Msa0276630:CDS | 35.0% |
| ACATCATCTTCATCGAAATC+AGG | + | chr2_3:8904260-8904279 | None:intergenic | 35.0% | |
| ATGAAGATGATGTTGAGCAT+TGG | - | chr2_3:8904267-8904286 | Msa0276630:CDS | 35.0% | |
| ! | TCAGTAATCTCATGGTTTTC+AGG | + | chr2_3:8904338-8904357 | None:intergenic | 35.0% |
| !! | ACATTGCCTAGTTCTATTCT+TGG | - | chr2_3:8904374-8904393 | Msa0276630:CDS | 35.0% |
| ! | TTTCGATGTTTTCAATGCGT+TGG | - | chr2_3:8904508-8904527 | Msa0276630:CDS | 35.0% |
| TTGGATGTAATGCATAACGA+GGG | - | chr2_3:8904527-8904546 | Msa0276630:CDS | 35.0% | |
| !!! | TTCCTGGGTATTTTAAGACT+TGG | - | chr2_3:8903775-8903794 | Msa0276630:CDS | 35.0% |
| ! | TGCTTTTATTACTGGGATAC+CGG | - | chr2_3:8903836-8903855 | Msa0276630:CDS | 35.0% |
| GAGGATTAGGGTTAATGATA+AGG | - | chr2_3:8903860-8903879 | Msa0276630:CDS | 35.0% | |
| TGATTAAGGAAGTTACTAGG+AGG | - | chr2_3:8903955-8903974 | Msa0276630:CDS | 35.0% | |
| GATTAAGGAAGTTACTAGGA+GGG | - | chr2_3:8903956-8903975 | Msa0276630:CDS | 35.0% | |
| CCAACATCAATAAGCTTCTT+CGG | + | chr2_3:8904077-8904096 | None:intergenic | 35.0% | |
| CGAAGAAGCTTATTGATGTT+GGG | - | chr2_3:8904075-8904094 | Msa0276630:CDS | 35.0% | |
| ! | TTATAAGTTGCCTGATTCGA+CGG | - | chr2_3:8904145-8904164 | Msa0276630:CDS | 35.0% |
| ACATCATCTTCATCGAAATC+AGG | + | chr2_3:8904260-8904279 | None:intergenic | 35.0% | |
| ATGAAGATGATGTTGAGCAT+TGG | - | chr2_3:8904267-8904286 | Msa0276630:CDS | 35.0% | |
| ! | TCAGTAATCTCATGGTTTTC+AGG | + | chr2_3:8904338-8904357 | None:intergenic | 35.0% |
| !! | ACATTGCCTAGTTCTATTCT+TGG | - | chr2_3:8904374-8904393 | Msa0276630:CDS | 35.0% |
| ! | TTTCGATGTTTTCAATGCGT+TGG | - | chr2_3:8904508-8904527 | Msa0276630:CDS | 35.0% |
| TTGGATGTAATGCATAACGA+GGG | - | chr2_3:8904527-8904546 | Msa0276630:CDS | 35.0% | |
| TGCCAAGTCTTAAAATACCC+AGG | + | chr2_3:8903780-8903799 | None:intergenic | 40.0% | |
| ! | AGACTTGGCATATTGGTGTT+CGG | - | chr2_3:8903790-8903809 | Msa0276630:CDS | 40.0% |
| GGCGAAAGATTCGAAGAAAT+TGG | - | chr2_3:8903812-8903831 | Msa0276630:CDS | 40.0% | |
| TGTGTGTGCATAAGAGACTT+AGG | - | chr2_3:8903910-8903929 | Msa0276630:CDS | 40.0% | |
| ATAAGAGACTTAGGTCGAAG+AGG | - | chr2_3:8903919-8903938 | Msa0276630:CDS | 40.0% | |
| AGTTACTAGGAGGGTTCATT+TGG | - | chr2_3:8903965-8903984 | Msa0276630:CDS | 40.0% | |
| GGGTTCATTTGGAGGATATT+TGG | - | chr2_3:8903976-8903995 | Msa0276630:CDS | 40.0% | |
| TTTGGAGGATATTTGGCAAG+CGG | - | chr2_3:8903983-8904002 | Msa0276630:CDS | 40.0% | |
| TATTTGGCAAGCGGCTTATA+CGG | - | chr2_3:8903992-8904011 | Msa0276630:CDS | 40.0% | |
| CAATACTGACAAGTAGCAAC+CGG | + | chr2_3:8904038-8904057 | None:intergenic | 40.0% | |
| !! | CTACTTGTCAGTATTGGCAT+AGG | - | chr2_3:8904042-8904061 | Msa0276630:CDS | 40.0% |
| CCGAAGAAGCTTATTGATGT+TGG | - | chr2_3:8904074-8904093 | Msa0276630:CDS | 40.0% | |
| TACGGAAGGGTTTAGGAAAA+TGG | - | chr2_3:8904169-8904188 | Msa0276630:CDS | 40.0% | |
| GTTTAGGAAAATGGAGCTGA+GGG | - | chr2_3:8904178-8904197 | Msa0276630:CDS | 40.0% | |
| AGGTTGCTTAGGGGTTATTT+GGG | - | chr2_3:8904218-8904237 | Msa0276630:CDS | 40.0% | |
| GGATGTTGTGGATAGTTACT+TGG | - | chr2_3:8904304-8904323 | Msa0276630:CDS | 40.0% | |
| TGTGGTTACTAAAACTCCGT+TGG | - | chr2_3:8904442-8904461 | Msa0276630:CDS | 40.0% | |
| GTTGGATGTAATGCATAACG+AGG | - | chr2_3:8904526-8904545 | Msa0276630:CDS | 40.0% | |
| TGCCAAGTCTTAAAATACCC+AGG | + | chr2_3:8903780-8903799 | None:intergenic | 40.0% | |
| ! | AGACTTGGCATATTGGTGTT+CGG | - | chr2_3:8903790-8903809 | Msa0276630:CDS | 40.0% |
| GGCGAAAGATTCGAAGAAAT+TGG | - | chr2_3:8903812-8903831 | Msa0276630:CDS | 40.0% | |
| TGTGTGTGCATAAGAGACTT+AGG | - | chr2_3:8903910-8903929 | Msa0276630:CDS | 40.0% | |
| ATAAGAGACTTAGGTCGAAG+AGG | - | chr2_3:8903919-8903938 | Msa0276630:CDS | 40.0% | |
| AGTTACTAGGAGGGTTCATT+TGG | - | chr2_3:8903965-8903984 | Msa0276630:CDS | 40.0% | |
| GGGTTCATTTGGAGGATATT+TGG | - | chr2_3:8903976-8903995 | Msa0276630:CDS | 40.0% | |
| TTTGGAGGATATTTGGCAAG+CGG | - | chr2_3:8903983-8904002 | Msa0276630:CDS | 40.0% | |
| TATTTGGCAAGCGGCTTATA+CGG | - | chr2_3:8903992-8904011 | Msa0276630:CDS | 40.0% | |
| CAATACTGACAAGTAGCAAC+CGG | + | chr2_3:8904038-8904057 | None:intergenic | 40.0% | |
| !! | CTACTTGTCAGTATTGGCAT+AGG | - | chr2_3:8904042-8904061 | Msa0276630:CDS | 40.0% |
| CCGAAGAAGCTTATTGATGT+TGG | - | chr2_3:8904074-8904093 | Msa0276630:CDS | 40.0% | |
| TACGGAAGGGTTTAGGAAAA+TGG | - | chr2_3:8904169-8904188 | Msa0276630:CDS | 40.0% | |
| GTTTAGGAAAATGGAGCTGA+GGG | - | chr2_3:8904178-8904197 | Msa0276630:CDS | 40.0% | |
| AGGTTGCTTAGGGGTTATTT+GGG | - | chr2_3:8904218-8904237 | Msa0276630:CDS | 40.0% | |
| GGATGTTGTGGATAGTTACT+TGG | - | chr2_3:8904304-8904323 | Msa0276630:CDS | 40.0% | |
| TGTGGTTACTAAAACTCCGT+TGG | - | chr2_3:8904442-8904461 | Msa0276630:CDS | 40.0% | |
| GTTGGATGTAATGCATAACG+AGG | - | chr2_3:8904526-8904545 | Msa0276630:CDS | 40.0% | |
| ! | GACTTGGCATATTGGTGTTC+GGG | - | chr2_3:8903791-8903810 | Msa0276630:CDS | 45.0% |
| TCATTAACCCTAATCCTCGC+CGG | + | chr2_3:8903858-8903877 | None:intergenic | 45.0% | |
| TACTAGGAGGGTTCATTTGG+AGG | - | chr2_3:8903968-8903987 | Msa0276630:CDS | 45.0% | |
| ! | CGGTTGCTACTTGTCAGTAT+TGG | - | chr2_3:8904036-8904055 | Msa0276630:CDS | 45.0% |
| !! | GATGTTGGGTTTTCAAGGCT+TGG | - | chr2_3:8904089-8904108 | Msa0276630:CDS | 45.0% |
| GGTTTAGGAAAATGGAGCTG+AGG | - | chr2_3:8904177-8904196 | Msa0276630:CDS | 45.0% | |
| GAGGTTGCTTAGGGGTTATT+TGG | - | chr2_3:8904217-8904236 | Msa0276630:CDS | 45.0% | |
| CTATCCACAACATCCTCATG+TGG | + | chr2_3:8904299-8904318 | None:intergenic | 45.0% | |
| TCGTTCATCAACTGAGCCAA+CGG | + | chr2_3:8904461-8904480 | None:intergenic | 45.0% | |
| !! | GATGAACGATGCACTGATTG+TGG | - | chr2_3:8904472-8904491 | Msa0276630:CDS | 45.0% |
| AAAGAGCTCAAGTTTGGACC+TGG | - | chr2_3:8904557-8904576 | Msa0276630:CDS | 45.0% | |
| GCCTTGAAACCATCTGAACT+TGG | - | chr2_3:8904626-8904645 | Msa0276630:intron | 45.0% | |
| GCCAAGTTCAGATGGTTTCA+AGG | + | chr2_3:8904630-8904649 | None:intergenic | 45.0% | |
| ! | GACTTGGCATATTGGTGTTC+GGG | - | chr2_3:8903791-8903810 | Msa0276630:CDS | 45.0% |
| TCATTAACCCTAATCCTCGC+CGG | + | chr2_3:8903858-8903877 | None:intergenic | 45.0% | |
| TACTAGGAGGGTTCATTTGG+AGG | - | chr2_3:8903968-8903987 | Msa0276630:CDS | 45.0% | |
| ! | CGGTTGCTACTTGTCAGTAT+TGG | - | chr2_3:8904036-8904055 | Msa0276630:CDS | 45.0% |
| !! | GATGTTGGGTTTTCAAGGCT+TGG | - | chr2_3:8904089-8904108 | Msa0276630:CDS | 45.0% |
| GGTTTAGGAAAATGGAGCTG+AGG | - | chr2_3:8904177-8904196 | Msa0276630:CDS | 45.0% | |
| GAGGTTGCTTAGGGGTTATT+TGG | - | chr2_3:8904217-8904236 | Msa0276630:CDS | 45.0% | |
| CTATCCACAACATCCTCATG+TGG | + | chr2_3:8904299-8904318 | None:intergenic | 45.0% | |
| TCGTTCATCAACTGAGCCAA+CGG | + | chr2_3:8904461-8904480 | None:intergenic | 45.0% | |
| !! | GATGAACGATGCACTGATTG+TGG | - | chr2_3:8904472-8904491 | Msa0276630:CDS | 45.0% |
| AAAGAGCTCAAGTTTGGACC+TGG | - | chr2_3:8904557-8904576 | Msa0276630:CDS | 45.0% | |
| GCCTTGAAACCATCTGAACT+TGG | - | chr2_3:8904626-8904645 | Msa0276630:intron | 45.0% | |
| GCCAAGTTCAGATGGTTTCA+AGG | + | chr2_3:8904630-8904649 | None:intergenic | 45.0% | |
| TTATTACTGGGATACCGGCG+AGG | - | chr2_3:8903841-8903860 | Msa0276630:CDS | 50.0% | |
| !! | GCTTGCGCCGGTTATGATTA+AGG | - | chr2_3:8903941-8903960 | Msa0276630:CDS | 50.0% |
| TGACAAGTAGCAACCGGAGT+CGG | + | chr2_3:8904032-8904051 | None:intergenic | 50.0% | |
| GTGCGAGGATGACAATGAGT+AGG | - | chr2_3:8904111-8904130 | Msa0276630:CDS | 50.0% | |
| ! | GTTGCCTGATTCGACGGTTA+CGG | - | chr2_3:8904151-8904170 | Msa0276630:CDS | 50.0% |
| ! | CTGATTCGACGGTTACGGAA+GGG | - | chr2_3:8904156-8904175 | Msa0276630:CDS | 50.0% |
| GCTTCCACATGAGGATGTTG+TGG | - | chr2_3:8904292-8904311 | Msa0276630:CDS | 50.0% | |
| ACTGATTGTGGCGAAGCAGA+AGG | - | chr2_3:8904484-8904503 | Msa0276630:CDS | 50.0% | |
| CTCAAGTTTGGACCTGGAGA+TGG | - | chr2_3:8904563-8904582 | Msa0276630:CDS | 50.0% | |
| TAGTGAAGCTGTCCATCTCC+AGG | + | chr2_3:8904578-8904597 | None:intergenic | 50.0% | |
| AGCACAAGGCCAAGTTCAGA+TGG | + | chr2_3:8904638-8904657 | None:intergenic | 50.0% | |
| TTATTACTGGGATACCGGCG+AGG | - | chr2_3:8903841-8903860 | Msa0276630:CDS | 50.0% | |
| !! | GCTTGCGCCGGTTATGATTA+AGG | - | chr2_3:8903941-8903960 | Msa0276630:CDS | 50.0% |
| TGACAAGTAGCAACCGGAGT+CGG | + | chr2_3:8904032-8904051 | None:intergenic | 50.0% | |
| GTGCGAGGATGACAATGAGT+AGG | - | chr2_3:8904111-8904130 | Msa0276630:CDS | 50.0% | |
| ! | GTTGCCTGATTCGACGGTTA+CGG | - | chr2_3:8904151-8904170 | Msa0276630:CDS | 50.0% |
| ! | CTGATTCGACGGTTACGGAA+GGG | - | chr2_3:8904156-8904175 | Msa0276630:CDS | 50.0% |
| GCTTCCACATGAGGATGTTG+TGG | - | chr2_3:8904292-8904311 | Msa0276630:CDS | 50.0% | |
| ACTGATTGTGGCGAAGCAGA+AGG | - | chr2_3:8904484-8904503 | Msa0276630:CDS | 50.0% | |
| CTCAAGTTTGGACCTGGAGA+TGG | - | chr2_3:8904563-8904582 | Msa0276630:CDS | 50.0% | |
| TAGTGAAGCTGTCCATCTCC+AGG | + | chr2_3:8904578-8904597 | None:intergenic | 50.0% | |
| AGCACAAGGCCAAGTTCAGA+TGG | + | chr2_3:8904638-8904657 | None:intergenic | 50.0% | |
| TGGGATACCGGCGAGGATTA+GGG | - | chr2_3:8903848-8903867 | Msa0276630:CDS | 55.0% | |
| !!! | GGTTTTCAAGGCTTGGTGCG+AGG | - | chr2_3:8904096-8904115 | Msa0276630:CDS | 55.0% |
| CCTTCCGTAACCGTCGAATC+AGG | + | chr2_3:8904158-8904177 | None:intergenic | 55.0% | |
| ! | CCTGATTCGACGGTTACGGA+AGG | - | chr2_3:8904155-8904174 | Msa0276630:CDS | 55.0% |
| CGACGGTTACGGAAGGGTTT+AGG | - | chr2_3:8904162-8904181 | Msa0276630:CDS | 55.0% | |
| TGCGGTCACGAGGTTGCTTA+GGG | - | chr2_3:8904208-8904227 | Msa0276630:CDS | 55.0% | |
| !! | GCATTGGCTGCTTCCACATG+AGG | - | chr2_3:8904283-8904302 | Msa0276630:CDS | 55.0% |
| TGGGATACCGGCGAGGATTA+GGG | - | chr2_3:8903848-8903867 | Msa0276630:CDS | 55.0% | |
| !!! | GGTTTTCAAGGCTTGGTGCG+AGG | - | chr2_3:8904096-8904115 | Msa0276630:CDS | 55.0% |
| CCTTCCGTAACCGTCGAATC+AGG | + | chr2_3:8904158-8904177 | None:intergenic | 55.0% | |
| ! | CCTGATTCGACGGTTACGGA+AGG | - | chr2_3:8904155-8904174 | Msa0276630:CDS | 55.0% |
| CGACGGTTACGGAAGGGTTT+AGG | - | chr2_3:8904162-8904181 | Msa0276630:CDS | 55.0% | |
| TGCGGTCACGAGGTTGCTTA+GGG | - | chr2_3:8904208-8904227 | Msa0276630:CDS | 55.0% | |
| !! | GCATTGGCTGCTTCCACATG+AGG | - | chr2_3:8904283-8904302 | Msa0276630:CDS | 55.0% |
| CTGGGATACCGGCGAGGATT+AGG | - | chr2_3:8903847-8903866 | Msa0276630:CDS | 60.0% | |
| TAGGTCGAAGAGGCTTGCGC+CGG | - | chr2_3:8903929-8903948 | Msa0276630:CDS | 60.0% | |
| TGGCAAGCGGCTTATACGGC+TGG | - | chr2_3:8903996-8904015 | Msa0276630:CDS | 60.0% | |
| GGCAAGCGGCTTATACGGCT+GGG | - | chr2_3:8903997-8904016 | Msa0276630:CDS | 60.0% | |
| GCAAGCGGCTTATACGGCTG+GGG | - | chr2_3:8903998-8904017 | Msa0276630:CDS | 60.0% | |
| !! | TGGGGTTGTGCTACCGACTC+CGG | - | chr2_3:8904016-8904035 | Msa0276630:CDS | 60.0% |
| GGAGCTGAGGGATGTTCCTG+CGG | - | chr2_3:8904190-8904209 | Msa0276630:CDS | 60.0% | |
| CTAAGCAACCTCGTGACCGC+AGG | + | chr2_3:8904209-8904228 | None:intergenic | 60.0% | |
| CTGCGGTCACGAGGTTGCTT+AGG | - | chr2_3:8904207-8904226 | Msa0276630:CDS | 60.0% | |
| GCGGTCACGAGGTTGCTTAG+GGG | - | chr2_3:8904209-8904228 | Msa0276630:CDS | 60.0% | |
| CTGGGATACCGGCGAGGATT+AGG | - | chr2_3:8903847-8903866 | Msa0276630:CDS | 60.0% | |
| TAGGTCGAAGAGGCTTGCGC+CGG | - | chr2_3:8903929-8903948 | Msa0276630:CDS | 60.0% | |
| TGGCAAGCGGCTTATACGGC+TGG | - | chr2_3:8903996-8904015 | Msa0276630:CDS | 60.0% | |
| GGCAAGCGGCTTATACGGCT+GGG | - | chr2_3:8903997-8904016 | Msa0276630:CDS | 60.0% | |
| GCAAGCGGCTTATACGGCTG+GGG | - | chr2_3:8903998-8904017 | Msa0276630:CDS | 60.0% | |
| !! | TGGGGTTGTGCTACCGACTC+CGG | - | chr2_3:8904016-8904035 | Msa0276630:CDS | 60.0% |
| GGAGCTGAGGGATGTTCCTG+CGG | - | chr2_3:8904190-8904209 | Msa0276630:CDS | 60.0% | |
| CTAAGCAACCTCGTGACCGC+AGG | + | chr2_3:8904209-8904228 | None:intergenic | 60.0% | |
| CTGCGGTCACGAGGTTGCTT+AGG | - | chr2_3:8904207-8904226 | Msa0276630:CDS | 60.0% | |
| GCGGTCACGAGGTTGCTTAG+GGG | - | chr2_3:8904209-8904228 | Msa0276630:CDS | 60.0% | |
| GGGATGTTCCTGCGGTCACG+AGG | - | chr2_3:8904198-8904217 | Msa0276630:CDS | 65.0% | |
| GGGATGTTCCTGCGGTCACG+AGG | - | chr2_3:8904198-8904217 | Msa0276630:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 8903761 | 8904664 | 8903761 | ID=Msa0276630;Name=Msa0276630 |
| chr2_3 | mRNA | 8903761 | 8904664 | 8903761 | ID=Msa0276630-mRNA-1;Parent=Msa0276630;Name=Msa0276630-mRNA-1;_AED=0.02;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|293 |
| chr2_3 | exon | 8904656 | 8904664 | 8904656 | ID=Msa0276630-mRNA-1:exon:4084;Parent=Msa0276630-mRNA-1 |
| chr2_3 | exon | 8903761 | 8904633 | 8903761 | ID=Msa0276630-mRNA-1:exon:4083;Parent=Msa0276630-mRNA-1 |
| chr2_3 | CDS | 8904656 | 8904664 | 8904656 | ID=Msa0276630-mRNA-1:cds;Parent=Msa0276630-mRNA-1 |
| chr2_3 | CDS | 8903761 | 8904633 | 8903761 | ID=Msa0276630-mRNA-1:cds;Parent=Msa0276630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
