Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615870 | XP_013457391.1 | 98.750 | 80 | 1 | 0 | 1 | 80 | 1 | 80 | 3.77e-51 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0615870 | 0.813979 | 1.945470e-51 | -8.615850e-47 |
| Msa0008090 | Msa0615870 | 0.827462 | 1.544219e-54 | -8.615850e-47 |
| Msa0008410 | Msa0615870 | 0.820716 | 5.920650e-53 | -8.615850e-47 |
| Msa0016670 | Msa0615870 | 0.802085 | 6.631583e-49 | -8.615850e-47 |
| Msa0025730 | Msa0615870 | 0.803246 | 3.820303e-49 | -8.615850e-47 |
| Msa0027260 | Msa0615870 | 0.833885 | 4.122785e-56 | -8.615850e-47 |
| Msa0032260 | Msa0615870 | 0.844044 | 9.645457e-59 | -8.615850e-47 |
| Msa0044020 | Msa0615870 | 0.801412 | 9.114755e-49 | -8.615850e-47 |
| Msa0047160 | Msa0615870 | 0.814171 | 1.764833e-51 | -8.615850e-47 |
| Msa0047980 | Msa0615870 | 0.839730 | 1.330380e-57 | -8.615850e-47 |
| Msa0064350 | Msa0615870 | 0.818661 | 1.744558e-52 | -8.615850e-47 |
| Msa0073670 | Msa0615870 | 0.806674 | 7.333098e-50 | -8.615850e-47 |
| Msa0076000 | Msa0615870 | 0.804220 | 2.398723e-49 | -8.615850e-47 |
| Msa0076040 | Msa0615870 | 0.808160 | 3.550375e-50 | -8.615850e-47 |
| Msa0094470 | Msa0615870 | 0.826314 | 2.903951e-54 | -8.615850e-47 |
| Msa0615440 | Msa0615870 | 0.808222 | 3.443387e-50 | -8.615850e-47 |
| Msa0615870 | Msa0619070 | 0.808451 | 3.076974e-50 | -8.615850e-47 |
| Msa0615870 | Msa0621950 | 0.824047 | 9.974485e-54 | -8.615850e-47 |
| Msa0615870 | Msa0641190 | 0.810733 | 9.951393e-51 | -8.615850e-47 |
| Msa0615870 | Msa0643220 | 0.803294 | 3.734595e-49 | -8.615850e-47 |
| Msa0615870 | Msa0650920 | 0.803393 | 3.561538e-49 | -8.615850e-47 |
| Msa0615870 | Msa0663900 | 0.824312 | 8.641721e-54 | -8.615850e-47 |
| Msa0615870 | Msa0682900 | 0.806167 | 9.383311e-50 | -8.615850e-47 |
| Msa0615870 | Msa0684500 | 0.817962 | 2.511212e-52 | -8.615850e-47 |
| Msa0615870 | Msa0687630 | 0.832054 | 1.176811e-55 | -8.615850e-47 |
| Msa0615870 | Msa0689500 | 0.823240 | 1.540422e-53 | -8.615850e-47 |
| Msa0615870 | Msa0692840 | 0.831645 | 1.484100e-55 | -8.615850e-47 |
| Msa0615870 | Msa0692940 | 0.827284 | 1.703168e-54 | -8.615850e-47 |
| Msa0615870 | Msa0695130 | 0.804856 | 1.766981e-49 | -8.615850e-47 |
| Msa0615870 | Msa0698490 | 0.810318 | 1.223618e-50 | -8.615850e-47 |
| Msa0615870 | Msa0698660 | 0.813662 | 2.285534e-51 | -8.615850e-47 |
| Msa0615870 | Msa0703230 | 0.821615 | 3.673864e-53 | -8.615850e-47 |
| Msa0615870 | Msa0709500 | 0.809755 | 1.617395e-50 | -8.615850e-47 |
| Msa0615870 | Msa0733480 | 0.831707 | 1.432977e-55 | -8.615850e-47 |
| Msa0615870 | Msa0735310 | 0.807661 | 4.533585e-50 | -8.615850e-47 |
| Msa0615870 | Msa0749760 | 0.808946 | 2.412112e-50 | -8.615850e-47 |
| Msa0615870 | Msa0750880 | 0.804636 | 1.964096e-49 | -8.615850e-47 |
| Msa0615870 | Msa0763020 | 0.803761 | 2.987643e-49 | -8.615850e-47 |
| Msa0615870 | Msa0763070 | 0.813314 | 2.724648e-51 | -8.615850e-47 |
| Msa0615870 | Msa0774540 | 0.809659 | 1.696023e-50 | -8.615850e-47 |
| Msa0615870 | Msa0786270 | 0.802245 | 6.147533e-49 | -8.615850e-47 |
| Msa0615870 | Msa0790850 | 0.818151 | 2.276228e-52 | -8.615850e-47 |
| Msa0615870 | Msa0812140 | 0.815831 | 7.555406e-52 | -8.615850e-47 |
| Msa0615870 | Msa0823090 | 0.818518 | 1.880093e-52 | -8.615850e-47 |
| Msa0615870 | Msa0824640 | 0.816701 | 4.829013e-52 | -8.615850e-47 |
| Msa0615870 | Msa0833310 | 0.801523 | 8.648946e-49 | -8.615850e-47 |
| Msa0615870 | Msa0842830 | 0.820835 | 5.558796e-53 | -8.615850e-47 |
| Msa0615870 | Msa0847080 | 0.836040 | 1.181167e-56 | -8.615850e-47 |
| Msa0615870 | Msa0850960 | 0.800122 | 1.671421e-48 | -8.615850e-47 |
| Msa0615870 | Msa0852390 | 0.817209 | 3.712372e-52 | -8.615850e-47 |
| Msa0615870 | Msa0863370 | 0.803921 | 2.767373e-49 | -8.615850e-47 |
| Msa0615870 | Msa0864010 | 0.817465 | 3.251145e-52 | -8.615850e-47 |
| Msa0615870 | Msa0902760 | 0.824450 | 8.017986e-54 | -8.615850e-47 |
| Msa0615870 | Msa0963020 | 0.801065 | 1.073419e-48 | -8.615850e-47 |
| Msa0615870 | Msa0967370 | 0.800464 | 1.423857e-48 | -8.615850e-47 |
| Msa0615870 | Msa0968590 | 0.806078 | 9.794018e-50 | -8.615850e-47 |
| Msa0615870 | Msa0970030 | 0.803592 | 3.239346e-49 | -8.615850e-47 |
| Msa0615870 | Msa1004550 | 0.807607 | 4.653175e-50 | -8.615850e-47 |
| Msa0615870 | Msa1004600 | 0.819701 | 1.011346e-52 | -8.615850e-47 |
| Msa0615870 | Msa1008060 | -0.806418 | 8.305984e-50 | -8.615850e-47 |
| Msa0615870 | Msa1013040 | 0.809787 | 1.591773e-50 | -8.615850e-47 |
| Msa0615870 | Msa1013400 | 0.815246 | 1.019921e-51 | -8.615850e-47 |
| Msa0615870 | Msa1019240 | 0.822572 | 2.205272e-53 | -8.615850e-47 |
| Msa0615870 | Msa1019260 | 0.831924 | 1.266638e-55 | -8.615850e-47 |
| Msa0615870 | Msa1063950 | 0.813033 | 3.140469e-51 | -8.615850e-47 |
| Msa0615870 | Msa1073900 | 0.808533 | 2.955392e-50 | -8.615850e-47 |
| Msa0615870 | Msa1081150 | 0.829954 | 3.855426e-55 | -8.615850e-47 |
| Msa0615870 | Msa1082700 | 0.819094 | 1.390943e-52 | -8.615850e-47 |
| Msa0615870 | Msa1084470 | 0.810579 | 1.074827e-50 | -8.615850e-47 |
| Msa0615870 | Msa1085200 | 0.803463 | 3.444979e-49 | -8.615850e-47 |
| Msa0615870 | Msa1093530 | 0.823113 | 1.649828e-53 | -8.615850e-47 |
| Msa0615870 | Msa1104140 | 0.806029 | 1.002838e-49 | -8.615850e-47 |
| Msa0615870 | Msa1104210 | 0.824239 | 8.990561e-54 | -8.615850e-47 |
| Msa0615870 | Msa1119200 | 0.833518 | 5.092082e-56 | -8.615850e-47 |
| Msa0615870 | Msa1126510 | 0.836745 | 7.816511e-57 | -8.615850e-47 |
| Msa0615870 | Msa1126770 | 0.831362 | 1.742508e-55 | -8.615850e-47 |
| Msa0615870 | Msa1127890 | 0.819389 | 1.191370e-52 | -8.615850e-47 |
| Msa0615870 | Msa1131560 | 0.802656 | 5.058893e-49 | -8.615850e-47 |
| Msa0615870 | Msa1165870 | 0.827886 | 1.220855e-54 | -8.615850e-47 |
| Msa0615870 | Msa1166330 | 0.832790 | 7.730698e-56 | -8.615850e-47 |
| Msa0615870 | Msa1166340 | 0.828288 | 9.773811e-55 | -8.615850e-47 |
| Msa0615870 | Msa1166860 | 0.825527 | 4.464715e-54 | -8.615850e-47 |
| Msa0615870 | Msa1166870 | 0.801586 | 8.395736e-49 | -8.615850e-47 |
| Msa0615870 | Msa1171360 | 0.809427 | 1.902033e-50 | -8.615850e-47 |
| Msa0615870 | Msa1178170 | 0.802464 | 5.541201e-49 | -8.615850e-47 |
| Msa0615870 | Msa1179950 | 0.813817 | 2.112524e-51 | -8.615850e-47 |
| Msa0615870 | Msa1179980 | 0.803707 | 3.065126e-49 | -8.615850e-47 |
| Msa0615870 | Msa1184370 | 0.811400 | 7.134883e-51 | -8.615850e-47 |
| Msa0615870 | Msa1207270 | 0.812023 | 5.222534e-51 | -8.615850e-47 |
| Msa0615870 | Msa1218600 | 0.829307 | 5.539282e-55 | -8.615850e-47 |
| Msa0615870 | Msa1227400 | 0.807504 | 4.894468e-50 | -8.615850e-47 |
| Msa0615870 | Msa1227690 | 0.814629 | 1.397821e-51 | -8.615850e-47 |
| Msa0615870 | Msa1254510 | 0.827775 | 1.298889e-54 | -8.615850e-47 |
| Msa0615870 | Msa1257510 | 0.800063 | 1.718108e-48 | -8.615850e-47 |
| Msa0615870 | Msa1265630 | 0.815406 | 9.395362e-52 | -8.615850e-47 |
| Msa0615870 | Msa1270620 | 0.804678 | 1.925002e-49 | -8.615850e-47 |
| Msa0615870 | Msa1270690 | 0.802925 | 4.450730e-49 | -8.615850e-47 |
| Msa0615870 | Msa1276190 | 0.808284 | 3.340430e-50 | -8.615850e-47 |
| Msa0615870 | Msa1283170 | 0.800213 | 1.601222e-48 | -8.615850e-47 |
| Msa0615870 | Msa1290190 | 0.822243 | 2.629688e-53 | -8.615850e-47 |
| Msa0615870 | Msa1292830 | 0.815745 | 7.899482e-52 | -8.615850e-47 |
| Msa0615870 | Msa1294840 | 0.804166 | 2.461406e-49 | -8.615850e-47 |
| Msa0615870 | Msa1295110 | 0.812512 | 4.083787e-51 | -8.615850e-47 |
| Msa0615870 | Msa1306990 | 0.813188 | 2.904447e-51 | -8.615850e-47 |
| Msa0615870 | Msa1307950 | 0.840592 | 7.927080e-58 | -8.615850e-47 |
| Msa0615870 | Msa1321630 | 0.805713 | 1.168586e-49 | -8.615850e-47 |
| Msa0615870 | Msa1343070 | 0.822237 | 2.637250e-53 | -8.615850e-47 |
| Msa0615870 | Msa1344850 | 0.802601 | 5.193548e-49 | -8.615850e-47 |
| Msa0615870 | Msa1356440 | 0.806329 | 8.672779e-50 | -8.615850e-47 |
| Msa0615870 | Msa1363330 | 0.800864 | 1.179992e-48 | -8.615850e-47 |
| Msa0615870 | Msa1365150 | 0.813288 | 2.761516e-51 | -8.615850e-47 |
| Msa0615870 | Msa1367880 | 0.819784 | 9.681767e-53 | -8.615850e-47 |
| Msa0615870 | Msa1376650 | 0.820398 | 7.005381e-53 | -8.615850e-47 |
| Msa0615870 | Msa1379760 | 0.832168 | 1.102401e-55 | -8.615850e-47 |
| Msa0615870 | Msa1386600 | 0.800934 | 1.141583e-48 | -8.615850e-47 |
| Msa0615870 | Msa1392200 | 0.812976 | 3.233263e-51 | -8.615850e-47 |
| Msa0615870 | Msa1394290 | 0.830908 | 2.252832e-55 | -8.615850e-47 |
| Msa0615870 | Msa1397940 | 0.811747 | 5.998745e-51 | -8.615850e-47 |
| Msa0615870 | Msa1404010 | 0.805309 | 1.420642e-49 | -8.615850e-47 |
| Msa0615870 | Msa1404190 | 0.835006 | 2.157416e-56 | -8.615850e-47 |
| Msa0615870 | Msa1422580 | 0.816077 | 6.658221e-52 | -8.615850e-47 |
| Msa0615870 | Msa1431040 | 0.824447 | 8.033407e-54 | -8.615850e-47 |
| Msa0615870 | Msa1442850 | 0.805181 | 1.511126e-49 | -8.615850e-47 |
| Msa0615870 | Msa1448510 | 0.813818 | 2.111101e-51 | -8.615850e-47 |
| Msa0615870 | Msa1450280 | 0.815734 | 7.942134e-52 | -8.615850e-47 |
| Msa0615870 | Msa1465080 | 0.802970 | 4.357740e-49 | -8.615850e-47 |
| Msa0124340 | Msa0615870 | 0.811011 | 8.666979e-51 | -8.615850e-47 |
| Msa0127310 | Msa0615870 | 0.849522 | 3.063757e-60 | -8.615850e-47 |
| Msa0128860 | Msa0615870 | 0.829308 | 5.534550e-55 | -8.615850e-47 |
| Msa0143430 | Msa0615870 | 0.800426 | 1.449057e-48 | -8.615850e-47 |
| Msa0165950 | Msa0615870 | 0.808539 | 2.947115e-50 | -8.615850e-47 |
| Msa0167480 | Msa0615870 | 0.800740 | 1.250954e-48 | -8.615850e-47 |
| Msa0174730 | Msa0615870 | 0.827247 | 1.738669e-54 | -8.615850e-47 |
| Msa0181610 | Msa0615870 | 0.804360 | 2.243077e-49 | -8.615850e-47 |
| Msa0183830 | Msa0615870 | 0.812409 | 4.301250e-51 | -8.615850e-47 |
| Msa0183900 | Msa0615870 | 0.803554 | 3.298487e-49 | -8.615850e-47 |
| Msa0185900 | Msa0615870 | 0.804004 | 2.659538e-49 | -8.615850e-47 |
| Msa0186890 | Msa0615870 | 0.819849 | 9.359089e-53 | -8.615850e-47 |
| Msa0187930 | Msa0615870 | 0.803570 | 3.273404e-49 | -8.615850e-47 |
| Msa0194540 | Msa0615870 | 0.806092 | 9.728798e-50 | -8.615850e-47 |
| Msa0195630 | Msa0615870 | 0.813631 | 2.320747e-51 | -8.615850e-47 |
| Msa0199690 | Msa0615870 | 0.835033 | 2.123620e-56 | -8.615850e-47 |
| Msa0199880 | Msa0615870 | 0.831832 | 1.334810e-55 | -8.615850e-47 |
| Msa0225180 | Msa0615870 | 0.810263 | 1.257599e-50 | -8.615850e-47 |
| Msa0226470 | Msa0615870 | 0.811586 | 6.502518e-51 | -8.615850e-47 |
| Msa0227400 | Msa0615870 | 0.814738 | 1.322270e-51 | -8.615850e-47 |
| Msa0236270 | Msa0615870 | 0.809984 | 1.443814e-50 | -8.615850e-47 |
| Msa0237410 | Msa0615870 | 0.806810 | 6.863757e-50 | -8.615850e-47 |
| Msa0366890 | Msa0615870 | 0.844330 | 8.081436e-59 | -8.615850e-47 |
| Msa0369050 | Msa0615870 | 0.801699 | 7.959059e-49 | -8.615850e-47 |
| Msa0369220 | Msa0615870 | 0.809781 | 1.596474e-50 | -8.615850e-47 |
| Msa0372670 | Msa0615870 | 0.800133 | 1.662876e-48 | -8.615850e-47 |
| Msa0376040 | Msa0615870 | 0.808187 | 3.502792e-50 | -8.615850e-47 |
| Msa0376300 | Msa0615870 | 0.812680 | 3.753813e-51 | -8.615850e-47 |
| Msa0376310 | Msa0615870 | 0.808443 | 3.089926e-50 | -8.615850e-47 |
| Msa0376690 | Msa0615870 | 0.819938 | 8.929771e-53 | -8.615850e-47 |
| Msa0385580 | Msa0615870 | 0.832884 | 7.325067e-56 | -8.615850e-47 |
| Msa0394400 | Msa0615870 | 0.814545 | 1.458851e-51 | -8.615850e-47 |
| Msa0398950 | Msa0615870 | 0.804021 | 2.637927e-49 | -8.615850e-47 |
| Msa0402330 | Msa0615870 | 0.805512 | 1.287909e-49 | -8.615850e-47 |
| Msa0410650 | Msa0615870 | 0.805089 | 1.579756e-49 | -8.615850e-47 |
| Msa0413450 | Msa0615870 | 0.805006 | 1.643728e-49 | -8.615850e-47 |
| Msa0414800 | Msa0615870 | 0.843498 | 1.350485e-58 | -8.615850e-47 |
| Msa0416400 | Msa0615870 | 0.806957 | 6.389527e-50 | -8.615850e-47 |
| Msa0423040 | Msa0615870 | 0.817329 | 3.488695e-52 | -8.615850e-47 |
| Msa0458060 | Msa0615870 | 0.852164 | 5.524520e-61 | -8.615850e-47 |
| Msa0471590 | Msa0615870 | 0.831851 | 1.320229e-55 | -8.615850e-47 |
| Msa0474950 | Msa0615870 | 0.813862 | 2.064769e-51 | -8.615850e-47 |
| Msa0239450 | Msa0615870 | 0.804014 | 2.646968e-49 | -8.615850e-47 |
| Msa0242230 | Msa0615870 | 0.814929 | 1.199267e-51 | -8.615850e-47 |
| Msa0244780 | Msa0615870 | 0.801601 | 8.339121e-49 | -8.615850e-47 |
| Msa0260830 | Msa0615870 | 0.819350 | 1.216173e-52 | -8.615850e-47 |
| Msa0268130 | Msa0615870 | 0.801824 | 7.501985e-49 | -8.615850e-47 |
| Msa0280430 | Msa0615870 | 0.813727 | 2.211128e-51 | -8.615850e-47 |
| Msa0280610 | Msa0615870 | 0.804684 | 1.919149e-49 | -8.615850e-47 |
| Msa0291520 | Msa0615870 | 0.813471 | 2.516638e-51 | -8.615850e-47 |
| Msa0298990 | Msa0615870 | 0.803650 | 3.150345e-49 | -8.615850e-47 |
| Msa0300120 | Msa0615870 | 0.826116 | 3.236764e-54 | -8.615850e-47 |
| Msa0304590 | Msa0615870 | 0.809858 | 1.537443e-50 | -8.615850e-47 |
| Msa0304660 | Msa0615870 | 0.802897 | 4.511541e-49 | -8.615850e-47 |
| Msa0331700 | Msa0615870 | 0.805411 | 1.352132e-49 | -8.615850e-47 |
| Msa0337650 | Msa0615870 | 0.800315 | 1.527123e-48 | -8.615850e-47 |
| Msa0355270 | Msa0615870 | 0.809444 | 1.886320e-50 | -8.615850e-47 |
| Msa0507680 | Msa0615870 | 0.800159 | 1.642611e-48 | -8.615850e-47 |
| Msa0508590 | Msa0615870 | 0.806990 | 6.289701e-50 | -8.615850e-47 |
| Msa0508630 | Msa0615870 | 0.810786 | 9.695629e-51 | -8.615850e-47 |
| Msa0516040 | Msa0615870 | 0.806080 | 9.784997e-50 | -8.615850e-47 |
| Msa0524500 | Msa0615870 | 0.835738 | 1.409118e-56 | -8.615850e-47 |
| Msa0526540 | Msa0615870 | 0.800353 | 1.499895e-48 | -8.615850e-47 |
| Msa0541860 | Msa0615870 | 0.820997 | 5.103440e-53 | -8.615850e-47 |
| Msa0547360 | Msa0615870 | 0.804207 | 2.412980e-49 | -8.615850e-47 |
| Msa0552810 | Msa0615870 | 0.838670 | 2.504610e-57 | -8.615850e-47 |
| Msa0556790 | Msa0615870 | 0.803296 | 3.730139e-49 | -8.615850e-47 |
| Msa0568820 | Msa0615870 | 0.807779 | 4.277788e-50 | -8.615850e-47 |
| Msa0571920 | Msa0615870 | 0.808511 | 2.987706e-50 | -8.615850e-47 |
| Msa0576940 | Msa0615870 | 0.800999 | 1.107379e-48 | -8.615850e-47 |
| Msa0581070 | Msa0615870 | 0.822099 | 2.839166e-53 | -8.615850e-47 |
| Msa0600610 | Msa0615870 | 0.801295 | 9.632828e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615870 | MtrunA17_Chr4g0052801 | 98.750 | 80 | 1 | 0 | 1 | 80 | 1 | 80 | 3.47e-55 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615870 | AT1G47278.3 | 57.500 | 80 | 34 | 0 | 1 | 80 | 1 | 80 | 7.66e-31 | 103 |
| Msa0615870 | AT1G47278.1 | 57.500 | 80 | 34 | 0 | 1 | 80 | 1 | 80 | 7.66e-31 | 103 |
| Msa0615870 | AT1G47278.2 | 57.500 | 80 | 34 | 0 | 1 | 80 | 12 | 91 | 9.57e-31 | 103 |
Find 27 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAACTTAACTAAATAAA+TGG | 0.229984 | 4_2:+65421729 | None:intergenic |
| CAATTCAAGATTGTGTTATC+TGG | 0.235113 | 4_2:-65421775 | Msa0615870:three_prime_UTR |
| TGCAAAGAGTTTCGTTAATC+TGG | 0.261218 | 4_2:+65425234 | None:intergenic |
| GATTTCAAGTTGTAGGATAA+TGG | 0.313664 | 4_2:-65422205 | Msa0615870:intron |
| AGATTAACGAAACTCTTTGC+AGG | 0.372535 | 4_2:-65425232 | Msa0615870:intron |
| ATTTCAAGTTGTAGGATAAT+GGG | 0.372893 | 4_2:-65422204 | Msa0615870:intron |
| AGGATAATGGGGCGGAAAGC+TGG | 0.409342 | 4_2:-65422192 | Msa0615870:exon |
| ATTGTGAAAATGATTAATAT+CGG | 0.440892 | 4_2:+65421794 | None:intergenic |
| AAATACATGTACAGAATCTC+AGG | 0.478456 | 4_2:-65422037 | Msa0615870:intron |
| TTTAGTTAAGTTGAAAGAGT+TGG | 0.483286 | 4_2:-65421722 | Msa0615870:three_prime_UTR |
| TAATGGGGCGGAAAGCTGGC+GGG | 0.509687 | 4_2:-65422188 | Msa0615870:CDS |
| ACTTCATAAACCTTGCATGA+AGG | 0.526107 | 4_2:-65422136 | Msa0615870:CDS |
| CATCAAACTACTTCCTTCCA+CGG | 0.534795 | 4_2:+65421821 | None:intergenic |
| GATCATGTTTATGAACTGTA+TGG | 0.548690 | 4_2:-65422109 | Msa0615870:CDS |
| CACATGCTTCAACATCGCTA+TGG | 0.552240 | 4_2:+65422079 | None:intergenic |
| ATGATCATTTCCTTCATGCA+AGG | 0.553694 | 4_2:+65422126 | None:intergenic |
| ATAATGGGGCGGAAAGCTGG+CGG | 0.563977 | 4_2:-65422189 | Msa0615870:CDS |
| TGCAGAGGCTTAGCCGTGGA+AGG | 0.569997 | 4_2:-65421834 | Msa0615870:CDS |
| ATTATATTGAAGAATACCAA+TGG | 0.581230 | 4_2:-65421695 | Msa0615870:three_prime_UTR |
| TGATACAAGAAATATTCCAT+TGG | 0.588434 | 4_2:+65421679 | None:intergenic |
| GAACAAATATGACAAGGTGA+TGG | 0.599602 | 4_2:+65421620 | None:intergenic |
| TGAAGCATGTGCTAAGCAGA+AGG | 0.631587 | 4_2:-65422067 | Msa0615870:CDS |
| TTTCAAGTTGTAGGATAATG+GGG | 0.640667 | 4_2:-65422203 | Msa0615870:intron |
| GTATCAATTATCAACTGCAG+AGG | 0.657183 | 4_2:-65421849 | Msa0615870:CDS |
| CAAGTTGTAGGATAATGGGG+CGG | 0.699621 | 4_2:-65422200 | Msa0615870:intron |
| AAAAGAACAGAAAGTCTTGG+GGG | 0.704646 | 4_2:-65421873 | Msa0615870:CDS |
| CAACTGCAGAGGCTTAGCCG+TGG | 0.708407 | 4_2:-65421838 | Msa0615870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATAACAATTACTTTA+AGG | - | chr4_2:65422393-65422412 | Msa0615870:intron | 10.0% |
| !! | AAAAAAATATATAAGTTATG+AGG | + | chr4_2:65422426-65422445 | None:intergenic | 10.0% |
| !! | CTAAAGTAATAAAAATATAT+AGG | + | chr4_2:65422568-65422587 | None:intergenic | 10.0% |
| !!! | CTATATATTTTTATTACTTT+AGG | - | chr4_2:65422566-65422585 | Msa0615870:intron | 10.0% |
| !!! | TTAATTAAAACTTTTAATTG+TGG | - | chr4_2:65424604-65424623 | Msa0615870:intron | 10.0% |
| !!! | TAATTAAAACTTTTAATTGT+GGG | - | chr4_2:65424605-65424624 | Msa0615870:intron | 10.0% |
| !!! | TTGTTTCTAATACATATTTT+TGG | - | chr4_2:65421698-65421717 | Msa0615870:three_prime_UTR | 15.0% |
| !! | TTTGAAAACTAAGATAAAAA+GGG | + | chr4_2:65422001-65422020 | None:intergenic | 15.0% |
| !! | ATTTGAAAACTAAGATAAAA+AGG | + | chr4_2:65422002-65422021 | None:intergenic | 15.0% |
| !!! | GTATTAAATTAGTTACTTTT+AGG | + | chr4_2:65422516-65422535 | None:intergenic | 15.0% |
| !! | ATTTAATACCAATTACTTTA+AGG | - | chr4_2:65422527-65422546 | Msa0615870:intron | 15.0% |
| !!! | ATTAAAACTGTTATTTGATT+TGG | + | chr4_2:65424660-65424679 | None:intergenic | 15.0% |
| !!! | AATAACAGTTTTAATTTTTC+TGG | - | chr4_2:65424665-65424684 | Msa0615870:intron | 15.0% |
| !! | ATTGTGAAAATGATTAATAT+CGG | + | chr4_2:65425105-65425124 | None:intergenic | 15.0% |
| !! | TTTCAACTTAACTAAATAAA+TGG | + | chr4_2:65425170-65425189 | None:intergenic | 15.0% |
| !!! | TTTTGGTTATTTTTATGCAA+TGG | - | chr4_2:65421715-65421734 | Msa0615870:three_prime_UTR | 20.0% |
| !!! | ATCTAATATGCTCATTTTAA+GGG | + | chr4_2:65421780-65421799 | None:intergenic | 20.0% |
| !!! | AATCTAATATGCTCATTTTA+AGG | + | chr4_2:65421781-65421800 | None:intergenic | 20.0% |
| !! | ATTGAAAACAATGATCAAAA+GGG | + | chr4_2:65421814-65421833 | None:intergenic | 20.0% |
| !! | AATTGAAAACAATGATCAAA+AGG | + | chr4_2:65421815-65421834 | None:intergenic | 20.0% |
| !! | ATAAAAATATATAGGTGATG+AGG | + | chr4_2:65422560-65422579 | None:intergenic | 20.0% |
| !!! | TTAGGATTTTGAATAGTTTT+AGG | - | chr4_2:65422612-65422631 | Msa0615870:intron | 20.0% |
| !!! | TTGAAATAGAAATTTAGCTT+AGG | - | chr4_2:65422845-65422864 | Msa0615870:intron | 20.0% |
| !!! | TTTTTGTTGTATACAAGAAA+AGG | - | chr4_2:65423392-65423411 | Msa0615870:intron | 20.0% |
| !!! | TTTTGTTGTATACAAGAAAA+GGG | - | chr4_2:65423393-65423412 | Msa0615870:intron | 20.0% |
| !!! | TTTTATCATCACTTCAATTT+TGG | - | chr4_2:65423476-65423495 | Msa0615870:intron | 20.0% |
| !!! | AGTAGAAATAACTGAATTTT+TGG | + | chr4_2:65423947-65423966 | None:intergenic | 20.0% |
| !! | CATTAAATGATCTTTCAAAT+TGG | - | chr4_2:65423968-65423987 | Msa0615870:intron | 20.0% |
| !!! | ATTGAATTTGCTTCATTAAT+AGG | - | chr4_2:65424042-65424061 | Msa0615870:intron | 20.0% |
| !!! | TTTTGTTATAGCATCTATAA+TGG | + | chr4_2:65424343-65424362 | None:intergenic | 20.0% |
| !! | ATAGATCTTAGTTTATTGAT+AGG | - | chr4_2:65424886-65424905 | Msa0615870:intron | 20.0% |
| !! | ATTATATTGAAGAATACCAA+TGG | - | chr4_2:65425201-65425220 | Msa0615870:intron | 20.0% |
| !! | TCTAATATGCTCATTTTAAG+GGG | + | chr4_2:65421779-65421798 | None:intergenic | 25.0% |
| ! | CAACTGTAATAATATATTGC+AGG | + | chr4_2:65422070-65422089 | None:intergenic | 25.0% |
| ! | CAATATATTATTACAGTTGC+TGG | - | chr4_2:65422071-65422090 | Msa0615870:CDS | 25.0% |
| ! | GTAATCATTGATCAATCTTA+TGG | - | chr4_2:65422156-65422175 | Msa0615870:CDS | 25.0% |
| ! | ACAAGATTTCTTTCTGTAAA+AGG | - | chr4_2:65422467-65422486 | Msa0615870:intron | 25.0% |
| !! | TTTCTGTAAAAGGTTACTTT+AGG | - | chr4_2:65422477-65422496 | Msa0615870:intron | 25.0% |
| ! | TTTCTGTAAAAGCTTAGTTT+AGG | - | chr4_2:65422594-65422613 | Msa0615870:intron | 25.0% |
| ! | TATTAGTATCATAACGTGAT+TGG | + | chr4_2:65422690-65422709 | None:intergenic | 25.0% |
| !!! | GAAATCATACTAGCTATTTT+GGG | + | chr4_2:65422799-65422818 | None:intergenic | 25.0% |
| !! | AGAAATCATACTAGCTATTT+TGG | + | chr4_2:65422800-65422819 | None:intergenic | 25.0% |
| ! | ATGTTAATTGCTTGAAGAAA+GGG | + | chr4_2:65422899-65422918 | None:intergenic | 25.0% |
| ! | AATGTTAATTGCTTGAAGAA+AGG | + | chr4_2:65422900-65422919 | None:intergenic | 25.0% |
| !!! | ATGAAATAGTGGATAAGTTT+TGG | - | chr4_2:65422931-65422950 | Msa0615870:intron | 25.0% |
| ! | TTGGAATTCATCTTAATTAG+TGG | - | chr4_2:65423000-65423019 | Msa0615870:intron | 25.0% |
| !!! | ATTTTGGAAACTTTTTGTTC+TGG | - | chr4_2:65423492-65423511 | Msa0615870:intron | 25.0% |
| ! | CATAAACTAAACCAACAATT+AGG | + | chr4_2:65423813-65423832 | None:intergenic | 25.0% |
| !!! | TTGGTTTTTTGATCAAGTAA+GGG | + | chr4_2:65423928-65423947 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTTTGATCAAGTA+AGG | + | chr4_2:65423929-65423948 | None:intergenic | 25.0% |
| ! | TCATATAATCGAACTAAAGA+AGG | + | chr4_2:65424168-65424187 | None:intergenic | 25.0% |
| !!! | AGCAATAACATATTTTGGTT+CGG | + | chr4_2:65424199-65424218 | None:intergenic | 25.0% |
| ! | ACCAAAATATGTTATTGCTA+TGG | - | chr4_2:65424200-65424219 | Msa0615870:intron | 25.0% |
| ! | CCAAAATATGTTATTGCTAT+GGG | - | chr4_2:65424201-65424220 | Msa0615870:intron | 25.0% |
| !!! | TCAGTTAGGTGAATATTTTT+TGG | - | chr4_2:65424498-65424517 | Msa0615870:intron | 25.0% |
| !!! | TGACTGTTTGTAATTTTTTC+TGG | - | chr4_2:65424558-65424577 | Msa0615870:intron | 25.0% |
| !!! | ACAGTTTTAATTTTTCTGGT+TGG | - | chr4_2:65424669-65424688 | Msa0615870:intron | 25.0% |
| !!! | ATTTCAAGTTGTAGGATAAT+GGG | - | chr4_2:65424692-65424711 | Msa0615870:intron | 25.0% |
| ! | GTAATCTGATAACTAAAACA+GGG | + | chr4_2:65424947-65424966 | None:intergenic | 25.0% |
| ! | TGTAATCTGATAACTAAAAC+AGG | + | chr4_2:65424948-65424967 | None:intergenic | 25.0% |
| ! | TAAAAAGAACAGAAAGTCTT+GGG | - | chr4_2:65425021-65425040 | Msa0615870:intron | 25.0% |
| !!! | TTTAGTTAAGTTGAAAGAGT+TGG | - | chr4_2:65425174-65425193 | Msa0615870:intron | 25.0% |
| ! | TGATACAAGAAATATTCCAT+TGG | + | chr4_2:65425220-65425239 | None:intergenic | 25.0% |
| ! | TTTGCTTATGTTTTGTCATC+TGG | - | chr4_2:65421853-65421872 | Msa0615870:CDS | 30.0% |
| !! | TGCATTTTGTTGTAGTTGTT+AGG | - | chr4_2:65421961-65421980 | Msa0615870:intron | 30.0% |
| GCTACAATACTCAGTTTAAA+TGG | - | chr4_2:65422251-65422270 | Msa0615870:intron | 30.0% | |
| ACAAAAACCATTCAAGACAA+TGG | + | chr4_2:65422353-65422372 | None:intergenic | 30.0% | |
| GTTGACAACCTTAAAGTAAT+TGG | + | chr4_2:65422404-65422423 | None:intergenic | 30.0% | |
| !!! | AGTTTTAGGAAAAGTGATGA+TGG | - | chr4_2:65422626-65422645 | Msa0615870:intron | 30.0% |
| GATGTCTAGTTATGAAATAG+TGG | - | chr4_2:65422920-65422939 | Msa0615870:intron | 30.0% | |
| !!! | ATTTTAAAAGTACCCTGATG+AGG | - | chr4_2:65423040-65423059 | Msa0615870:intron | 30.0% |
| GTCATTCCTTAATCAAATCA+TGG | - | chr4_2:65423242-65423261 | Msa0615870:intron | 30.0% | |
| TGTATACAACAAAAATGTGC+TGG | + | chr4_2:65423387-65423406 | None:intergenic | 30.0% | |
| !! | CTTTTTGTTCTGGCTAAATT+AGG | - | chr4_2:65423502-65423521 | Msa0615870:intron | 30.0% |
| TATTCTGAACCTCAAAGAAA+TGG | + | chr4_2:65423585-65423604 | None:intergenic | 30.0% | |
| CTGTCTGTTGAAGTAATTAT+TGG | + | chr4_2:65423636-65423655 | None:intergenic | 30.0% | |
| !! | TGATGGATTATAGTAGGAAT+AGG | - | chr4_2:65423656-65423675 | Msa0615870:intron | 30.0% |
| ! | TTTGTTATCAACGAGAGAAT+AGG | - | chr4_2:65423748-65423767 | Msa0615870:intron | 30.0% |
| CTAAACCAACAATTAGGATA+AGG | + | chr4_2:65423807-65423826 | None:intergenic | 30.0% | |
| !! | TTGTTGGTTTAGTTTATGCA+TGG | - | chr4_2:65423815-65423834 | Msa0615870:intron | 30.0% |
| !!! | GCAATAACATATTTTGGTTC+GGG | + | chr4_2:65424198-65424217 | None:intergenic | 30.0% |
| ! | CCCATAGCAATAACATATTT+TGG | + | chr4_2:65424204-65424223 | None:intergenic | 30.0% |
| ! | TTTGTTATCAACGAGAGAAT+AGG | - | chr4_2:65423748-65423767 | Msa0615870:intron | 30.0% |
| GCATAATTTCATGATGTTGA+CGG | + | chr4_2:65424475-65424494 | None:intergenic | 30.0% | |
| TGAAATTATGCTCTTCAGTT+AGG | - | chr4_2:65424484-65424503 | Msa0615870:intron | 30.0% | |
| !! | GATTTCAAGTTGTAGGATAA+TGG | - | chr4_2:65424691-65424710 | Msa0615870:intron | 30.0% |
| !! | TTTCAAGTTGTAGGATAATG+GGG | - | chr4_2:65424693-65424712 | Msa0615870:intron | 30.0% |
| GATCATGTTTATGAACTGTA+TGG | - | chr4_2:65424787-65424806 | Msa0615870:intron | 30.0% | |
| AAATACATGTACAGAATCTC+AGG | - | chr4_2:65424859-65424878 | Msa0615870:intron | 30.0% | |
| GATTACATGACATGAAAACT+AGG | - | chr4_2:65424961-65424980 | Msa0615870:intron | 30.0% | |
| GTAAAAAGAACAGAAAGTCT+TGG | - | chr4_2:65425020-65425039 | Msa0615870:intron | 30.0% | |
| AAAAAGAACAGAAAGTCTTG+GGG | - | chr4_2:65425022-65425041 | Msa0615870:intron | 30.0% | |
| CAATTCAAGATTGTGTTATC+TGG | - | chr4_2:65425121-65425140 | Msa0615870:intron | 30.0% | |
| TGCAAAGAGTTTCGTTAATC+TGG | + | chr4_2:65421665-65421684 | None:intergenic | 35.0% | |
| AGATTAACGAAACTCTTTGC+AGG | - | chr4_2:65421664-65421683 | Msa0615870:three_prime_UTR | 35.0% | |
| ACTAAGATAAAAAGGGTGAG+TGG | + | chr4_2:65421994-65422013 | None:intergenic | 35.0% | |
| AAGAAAGCAACCTTAGTAAG+AGG | - | chr4_2:65422325-65422344 | Msa0615870:intron | 35.0% | |
| ACTAATAGCAACAACAACTG+TGG | - | chr4_2:65422703-65422722 | Msa0615870:intron | 35.0% | |
| TGCTTGAAGAAAGGGAAATA+CGG | + | chr4_2:65422891-65422910 | None:intergenic | 35.0% | |
| TAATGTGAACTTCTGTCAAG+TGG | - | chr4_2:65422974-65422993 | Msa0615870:intron | 35.0% | |
| AATGTGAACTTCTGTCAAGT+GGG | - | chr4_2:65422975-65422994 | Msa0615870:intron | 35.0% | |
| ! | TTAGTGGATAAGTCTGAGTT+TGG | - | chr4_2:65423016-65423035 | Msa0615870:intron | 35.0% |
| TTAAGGAATGACACGAAGTA+AGG | + | chr4_2:65423234-65423253 | None:intergenic | 35.0% | |
| CAGCAACCATGATTTGATTA+AGG | + | chr4_2:65423251-65423270 | None:intergenic | 35.0% | |
| ! | CTTACATGATGCACATGTTT+TGG | - | chr4_2:65423276-65423295 | Msa0615870:intron | 35.0% |
| AAATTGCTGCTATACTTACG+TGG | - | chr4_2:65423316-65423335 | Msa0615870:intron | 35.0% | |
| AATTGCTGCTATACTTACGT+GGG | - | chr4_2:65423317-65423336 | Msa0615870:intron | 35.0% | |
| TGTTGTATACAAGAAAAGGG+TGG | - | chr4_2:65423396-65423415 | Msa0615870:intron | 35.0% | |
| !!! | AGTTGTGTCTTGCTTTTTTG+AGG | - | chr4_2:65423427-65423446 | Msa0615870:intron | 35.0% |
| AACCTTCATCCATTTCTTTG+AGG | - | chr4_2:65423573-65423592 | Msa0615870:intron | 35.0% | |
| AACCTCAAAGAAATGGATGA+AGG | + | chr4_2:65423578-65423597 | None:intergenic | 35.0% | |
| ATTACTTCAACAGACAGTGA+TGG | - | chr4_2:65423639-65423658 | Msa0615870:intron | 35.0% | |
| !! | AGACAGTGATGGATTATAGT+AGG | - | chr4_2:65423650-65423669 | Msa0615870:intron | 35.0% |
| AAGGACGAAGATGAAATTTG+TGG | + | chr4_2:65423788-65423807 | None:intergenic | 35.0% | |
| TTCGTCCTTATCCTAATTGT+TGG | - | chr4_2:65423799-65423818 | Msa0615870:intron | 35.0% | |
| ! | TTGGTTTAGTTTATGCATGG+CGG | - | chr4_2:65423818-65423837 | Msa0615870:intron | 35.0% |
| ATCAAGTAAGGGAAACTCAA+TGG | + | chr4_2:65423917-65423936 | None:intergenic | 35.0% | |
| ! | CGATTTGACTTTGATCGTTA+TGG | - | chr4_2:65424069-65424088 | Msa0615870:intron | 35.0% |
| !! | AGGAGCCATTTTCATAGTTA+CGG | + | chr4_2:65424148-65424167 | None:intergenic | 35.0% |
| CCGAACAGTACTATAAGAAT+CGG | + | chr4_2:65424259-65424278 | None:intergenic | 35.0% | |
| CCGATTCTTATAGTACTGTT+CGG | - | chr4_2:65424256-65424275 | Msa0615870:intron | 35.0% | |
| CGATTCTTATAGTACTGTTC+GGG | - | chr4_2:65424257-65424276 | Msa0615870:intron | 35.0% | |
| GATTCTTATAGTACTGTTCG+GGG | - | chr4_2:65424258-65424277 | Msa0615870:intron | 35.0% | |
| ATAGCATCTATAATGGCTTC+CGG | + | chr4_2:65424336-65424355 | None:intergenic | 35.0% | |
| ACGAACCACAAATTTCATCT+TGG | - | chr4_2:65423780-65423799 | Msa0615870:intron | 35.0% | |
| AAATCTAATGCCAATGCACA+TGG | + | chr4_2:65424529-65424548 | None:intergenic | 35.0% | |
| ACTTCATAAACCTTGCATGA+AGG | - | chr4_2:65424760-65424779 | Msa0615870:intron | 35.0% | |
| ATGATCATTTCCTTCATGCA+AGG | + | chr4_2:65424773-65424792 | None:intergenic | 35.0% | |
| AAAAGAACAGAAAGTCTTGG+GGG | - | chr4_2:65425023-65425042 | Msa0615870:intron | 35.0% | |
| GTATCAATTATCAACTGCAG+AGG | - | chr4_2:65425047-65425066 | Msa0615870:intron | 35.0% | |
| ! | TTGCTGGTGTTAATTAGCAG+AGG | - | chr4_2:65422087-65422106 | Msa0615870:CDS | 40.0% |
| AACGTGATTGGATCAACAGA+AGG | + | chr4_2:65422678-65422697 | None:intergenic | 40.0% | |
| TTTGGGAGCTGTTAATGAAG+TGG | + | chr4_2:65422782-65422801 | None:intergenic | 40.0% | |
| TCCATCATAGAAGAAGTCTG+TGG | - | chr4_2:65423077-65423096 | Msa0615870:intron | 40.0% | |
| ACCACAGACTTCTTCTATGA+TGG | + | chr4_2:65423081-65423100 | None:intergenic | 40.0% | |
| TGAATCTGCGTAACATGAAC+AGG | - | chr4_2:65423204-65423223 | Msa0615870:intron | 40.0% | |
| !!! | GTCTTGCTTTTTTGAGGACA+TGG | - | chr4_2:65423433-65423452 | Msa0615870:intron | 40.0% |
| TTTGTCAACAGACAGTGATG+AGG | - | chr4_2:65423693-65423712 | Msa0615870:intron | 40.0% | |
| ! | TTTAGTTTATGCATGGCGGA+AGG | - | chr4_2:65423822-65423841 | Msa0615870:intron | 40.0% |
| ! | TTAGTTTATGCATGGCGGAA+GGG | - | chr4_2:65423823-65423842 | Msa0615870:intron | 40.0% |
| GGTCAAGACTATCCAGTTTA+TGG | - | chr4_2:65423989-65424008 | Msa0615870:intron | 40.0% | |
| ATAGAGAAGTGGCCATAAAC+TGG | + | chr4_2:65424004-65424023 | None:intergenic | 40.0% | |
| AGTTTATGGCCACTTCTCTA+TGG | - | chr4_2:65424003-65424022 | Msa0615870:intron | 40.0% | |
| CAACTAGTACCATAGAGAAG+TGG | + | chr4_2:65424015-65424034 | None:intergenic | 40.0% | |
| TGACTTTGATCGTTATGGAC+TGG | - | chr4_2:65424074-65424093 | Msa0615870:intron | 40.0% | |
| !!! | GGCAGACCTTATTTTAACAG+CGG | - | chr4_2:65424119-65424138 | Msa0615870:intron | 40.0% |
| !!! | GCAGACCTTATTTTAACAGC+GGG | - | chr4_2:65424120-65424139 | Msa0615870:intron | 40.0% |
| TCTATAATGGCTTCCGGTTT+AGG | + | chr4_2:65424330-65424349 | None:intergenic | 40.0% | |
| TGCGTCCAAGATGAAATTTG+TGG | + | chr4_2:65424443-65424462 | None:intergenic | 40.0% | |
| ! | TTTGGTGATTCCATGTGCAT+TGG | - | chr4_2:65424516-65424535 | Msa0615870:intron | 40.0% |
| !! | CTGGTTGGATTTCAAGTTGT+AGG | - | chr4_2:65424684-65424703 | Msa0615870:intron | 40.0% |
| AAACAGGGAACAATGAGAAG+AGG | + | chr4_2:65424932-65424951 | None:intergenic | 40.0% | |
| CATCAAACTACTTCCTTCCA+CGG | + | chr4_2:65425078-65425097 | None:intergenic | 40.0% | |
| GACAATGGAGCCTCTTACTA+AGG | + | chr4_2:65422338-65422357 | None:intergenic | 45.0% | |
| AGAGGCTCCATTGTCTTGAA+TGG | - | chr4_2:65422343-65422362 | Msa0615870:intron | 45.0% | |
| ! | GCAACAACAACTGTGGATTG+TGG | - | chr4_2:65422710-65422729 | Msa0615870:intron | 45.0% |
| AACTTCTGTCAAGTGGGTGT+TGG | - | chr4_2:65422981-65423000 | Msa0615870:intron | 45.0% | |
| CATTCCAAACAGCCTCATCA+GGG | + | chr4_2:65423055-65423074 | None:intergenic | 45.0% | |
| ACATTCCAAACAGCCTCATC+AGG | + | chr4_2:65423056-65423075 | None:intergenic | 45.0% | |
| CACTCACCAACTCTTCATCT+AGG | - | chr4_2:65423151-65423170 | Msa0615870:intron | 45.0% | |
| TACCAGCCTAGATGAAGAGT+TGG | + | chr4_2:65423160-65423179 | None:intergenic | 45.0% | |
| TCAACAGACAGTGATGAGGA+AGG | - | chr4_2:65423697-65423716 | Msa0615870:intron | 45.0% | |
| CAACAGACAGTGATGAGGAA+GGG | - | chr4_2:65423698-65423717 | Msa0615870:intron | 45.0% | |
| !! | ATCGTTATGGACTGGTACCA+CGG | - | chr4_2:65424082-65424101 | Msa0615870:intron | 45.0% |
| AAAATAAGGTCTGCCTGCCT+AGG | + | chr4_2:65424114-65424133 | None:intergenic | 45.0% | |
| ! | GGGCACCGTAACTATGAAAA+TGG | - | chr4_2:65424140-65424159 | Msa0615870:intron | 45.0% |
| ATGGGAGCCTGTACAATTAC+AGG | - | chr4_2:65424219-65424238 | Msa0615870:intron | 45.0% | |
| GAGCCTGTACAATTACAGGA+GGG | - | chr4_2:65424223-65424242 | Msa0615870:intron | 45.0% | |
| CATCCCTCCTGTAATTGTAC+AGG | + | chr4_2:65424229-65424248 | None:intergenic | 45.0% | |
| CGTGGATAAGCTAATTCCTG+TGG | - | chr4_2:65424281-65424300 | Msa0615870:intron | 45.0% | |
| ATAATGGCTTCCGGTTTAGG+TGG | + | chr4_2:65424327-65424346 | None:intergenic | 45.0% | |
| !! | CAAGTTGTAGGATAATGGGG+CGG | - | chr4_2:65424696-65424715 | Msa0615870:intron | 45.0% |
| CACATGCTTCAACATCGCTA+TGG | + | chr4_2:65424820-65424839 | None:intergenic | 45.0% | |
| TGAAGCATGTGCTAAGCAGA+AGG | - | chr4_2:65424829-65424848 | Msa0615870:intron | 45.0% | |
| AGGGAACAATGAGAAGAGGA+GGG | + | chr4_2:65424928-65424947 | None:intergenic | 45.0% | |
| AGTACCCTGATGAGGCTGTT+TGG | - | chr4_2:65423048-65423067 | Msa0615870:intron | 50.0% | |
| CACCAACTCTTCATCTAGGC+TGG | - | chr4_2:65423155-65423174 | Msa0615870:intron | 50.0% | |
| CGGTGCCCGCTGTTAAAATA+AGG | + | chr4_2:65424128-65424147 | None:intergenic | 50.0% | |
| GGAGCCTGTACAATTACAGG+AGG | - | chr4_2:65424222-65424241 | Msa0615870:intron | 50.0% | |
| TTATAGTACTGTTCGGGGCG+TGG | - | chr4_2:65424263-65424282 | Msa0615870:intron | 50.0% | |
| CCTGGCAAATAGACATCCAC+AGG | + | chr4_2:65424300-65424319 | None:intergenic | 50.0% | |
| CCTGTGGATGTCTATTTGCC+AGG | - | chr4_2:65424297-65424316 | Msa0615870:intron | 50.0% | |
| GGGAACAATGAGAAGAGGAG+GGG | + | chr4_2:65424927-65424946 | None:intergenic | 50.0% | |
| CAGGGAACAATGAGAAGAGG+AGG | + | chr4_2:65424929-65424948 | None:intergenic | 50.0% | |
| !! | GGCGGAAGGGAGCATTAGAA+TGG | - | chr4_2:65423836-65423855 | Msa0615870:intron | 55.0% |
| !! | AGGATAATGGGGCGGAAAGC+TGG | - | chr4_2:65424704-65424723 | Msa0615870:intron | 55.0% |
| ! | ATAATGGGGCGGAAAGCTGG+CGG | - | chr4_2:65424707-65424726 | Msa0615870:intron | 55.0% |
| TGGTACCACGGTCGAGTCCT+AGG | - | chr4_2:65424094-65424113 | Msa0615870:intron | 60.0% | |
| GCCAGGCTGTCCACCTAAAC+CGG | - | chr4_2:65424314-65424333 | Msa0615870:intron | 60.0% | |
| TCCGGTTTAGGTGGACAGCC+TGG | + | chr4_2:65424318-65424337 | None:intergenic | 60.0% | |
| TAATGGGGCGGAAAGCTGGC+GGG | - | chr4_2:65424708-65424727 | Msa0615870:intron | 60.0% | |
| CAACTGCAGAGGCTTAGCCG+TGG | - | chr4_2:65425058-65425077 | Msa0615870:intron | 60.0% | |
| TGCAGAGGCTTAGCCGTGGA+AGG | - | chr4_2:65425062-65425081 | Msa0615870:intron | 60.0% | |
| ACCACGGTCGAGTCCTAGGC+AGG | - | chr4_2:65424098-65424117 | Msa0615870:intron | 65.0% | |
| GCCTGCCTAGGACTCGACCG+TGG | + | chr4_2:65424102-65424121 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 65421635 | 65425283 | 65421635 | ID=Msa0615870;Name=Msa0615870 |
| chr4_2 | mRNA | 65421635 | 65425283 | 65421635 | ID=Msa0615870-mRNA-1;Parent=Msa0615870;Name=Msa0615870-mRNA-1;_AED=0.11;_eAED=0.11;_QI=55|0.5|0.66|1|0.5|1|3|193|80 |
| chr4_2 | exon | 65421635 | 65421899 | 65421635 | ID=Msa0615870-mRNA-1:exon:18539;Parent=Msa0615870-mRNA-1 |
| chr4_2 | exon | 65422038 | 65422212 | 65422038 | ID=Msa0615870-mRNA-1:exon:18538;Parent=Msa0615870-mRNA-1 |
| chr4_2 | exon | 65425233 | 65425283 | 65425233 | ID=Msa0615870-mRNA-1:exon:18537;Parent=Msa0615870-mRNA-1 |
| chr4_2 | five_prime_UTR | 65425233 | 65425283 | 65425233 | ID=Msa0615870-mRNA-1:five_prime_utr;Parent=Msa0615870-mRNA-1 |
| chr4_2 | five_prime_UTR | 65422209 | 65422212 | 65422209 | ID=Msa0615870-mRNA-1:five_prime_utr;Parent=Msa0615870-mRNA-1 |
| chr4_2 | CDS | 65422038 | 65422208 | 65422038 | ID=Msa0615870-mRNA-1:cds;Parent=Msa0615870-mRNA-1 |
| chr4_2 | CDS | 65421828 | 65421899 | 65421828 | ID=Msa0615870-mRNA-1:cds;Parent=Msa0615870-mRNA-1 |
| chr4_2 | three_prime_UTR | 65421635 | 65421827 | 65421635 | ID=Msa0615870-mRNA-1:three_prime_utr;Parent=Msa0615870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
