AlfalfaGEDB | Msa0852390

M. sativa cultivar zhongmu-4 / Msa0852390

KEGG: K03537
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009249 GO:0009987 GO:0010467 GO:0018065 GO:0018193 GO:0018205 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051604 GO:0071704 GO:1901564
PFAM: PF01900.22

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0852390	XP_003615482.1	100.000	153	0	0	1	153	1	153	1.00e-109	318

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0852390	sp\|Q6AWV1\|POP5_ARATH	61.184	152	54	2	3	153	4	151	9.26e-65	197

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0852390	G7K656	100.000	153	0	0	1	153	1	153	4.78e-110	318

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0002490	Msa0852390	0.814553	1.453104e-51	-8.615850e-47
Msa0008090	Msa0852390	0.835106	2.035728e-56	-8.615850e-47
Msa0025730	Msa0852390	0.809586	1.759047e-50	-8.615850e-47
Msa0027260	Msa0852390	0.814653	1.380447e-51	-8.615850e-47
Msa0032260	Msa0852390	0.833110	6.437244e-56	-8.615850e-47
Msa0042280	Msa0852390	0.802454	5.567101e-49	-8.615850e-47
Msa0047160	Msa0852390	0.816329	5.848438e-52	-8.615850e-47
Msa0048180	Msa0852390	0.810400	1.174761e-50	-8.615850e-47
Msa0057140	Msa0852390	0.807432	5.069047e-50	-8.615850e-47
Msa0057400	Msa0852390	0.827703	1.351363e-54	-8.615850e-47
Msa0073670	Msa0852390	0.809116	2.217890e-50	-8.615850e-47
Msa0076000	Msa0852390	0.800013	1.758955e-48	-8.615850e-47
Msa0090520	Msa0852390	0.813080	3.067465e-51	-8.615850e-47
Msa0091570	Msa0852390	0.813362	2.659437e-51	-8.615850e-47
Msa0091610	Msa0852390	0.804661	1.940740e-49	-8.615850e-47
Msa0094470	Msa0852390	0.824428	8.115465e-54	-8.615850e-47
Msa0115370	Msa0852390	0.810036	1.407472e-50	-8.615850e-47
Msa0115390	Msa0852390	0.805378	1.374270e-49	-8.615850e-47
Msa0609000	Msa0852390	0.800336	1.512125e-48	-8.615850e-47
Msa0610390	Msa0852390	0.804611	1.988284e-49	-8.615850e-47
Msa0615440	Msa0852390	0.801318	9.527942e-49	-8.615850e-47
Msa0615870	Msa0852390	0.817209	3.712372e-52	-8.615850e-47
Msa0619070	Msa0852390	0.802253	6.124579e-49	-8.615850e-47
Msa0623700	Msa0852390	0.817975	2.494887e-52	-8.615850e-47
Msa0639120	Msa0852390	0.807251	5.538320e-50	-8.615850e-47
Msa0650920	Msa0852390	0.813721	2.217292e-51	-8.615850e-47
Msa0652300	Msa0852390	0.805749	1.148451e-49	-8.615850e-47
Msa0661090	Msa0852390	0.800461	1.426060e-48	-8.615850e-47
Msa0666230	Msa0852390	0.804407	2.192966e-49	-8.615850e-47
Msa0687020	Msa0852390	0.802911	4.480574e-49	-8.615850e-47
Msa0687630	Msa0852390	0.813883	2.043220e-51	-8.615850e-47
Msa0689500	Msa0852390	0.828517	8.605577e-55	-8.615850e-47
Msa0692840	Msa0852390	0.803925	2.761650e-49	-8.615850e-47
Msa0692940	Msa0852390	0.813603	2.354471e-51	-8.615850e-47
Msa0694840	Msa0852390	0.829599	4.705002e-55	-8.615850e-47
Msa0697940	Msa0852390	0.803268	3.780559e-49	-8.615850e-47
Msa0698060	Msa0852390	0.801900	7.238632e-49	-8.615850e-47
Msa0698490	Msa0852390	0.801017	1.097946e-48	-8.615850e-47
Msa0698660	Msa0852390	0.803221	3.865483e-49	-8.615850e-47
Msa0722020	Msa0852390	0.817186	3.758526e-52	-8.615850e-47
Msa0726830	Msa0852390	0.802360	5.821560e-49	-8.615850e-47
Msa0733480	Msa0852390	0.957632	1.698507e-115	-8.615850e-47
Msa0735310	Msa0852390	0.828308	9.663172e-55	-8.615850e-47
Msa0738100	Msa0852390	0.802634	5.110834e-49	-8.615850e-47
Msa0750920	Msa0852390	0.800223	1.593692e-48	-8.615850e-47
Msa0763070	Msa0852390	0.804727	1.880362e-49	-8.615850e-47
Msa0774540	Msa0852390	0.938203	9.911429e-99	-8.615850e-47
Msa0780880	Msa0852390	0.815882	7.361768e-52	-8.615850e-47
Msa0781270	Msa0852390	0.802596	5.204698e-49	-8.615850e-47
Msa0787750	Msa0852390	0.811149	8.087412e-51	-8.615850e-47
Msa0793390	Msa0852390	0.836793	7.597253e-57	-8.615850e-47
Msa0797750	Msa0852390	0.821012	5.062365e-53	-8.615850e-47
Msa0800370	Msa0852390	0.804562	2.035774e-49	-8.615850e-47
Msa0805500	Msa0852390	0.824264	8.866661e-54	-8.615850e-47
Msa0806920	Msa0852390	0.809999	1.433199e-50	-8.615850e-47
Msa0812140	Msa0852390	0.902417	9.908499e-79	-8.615850e-47
Msa0812570	Msa0852390	0.802864	4.583175e-49	-8.615850e-47
Msa0814320	Msa0852390	0.820181	7.853920e-53	-8.615850e-47
Msa0823090	Msa0852390	0.803350	3.635810e-49	-8.615850e-47
Msa0823500	Msa0852390	0.806374	8.485041e-50	-8.615850e-47
Msa0824640	Msa0852390	0.803688	3.094266e-49	-8.615850e-47
Msa0826500	Msa0852390	0.810393	1.178916e-50	-8.615850e-47
Msa0835280	Msa0852390	0.816785	4.624199e-52	-8.615850e-47
Msa0127310	Msa0852390	0.837104	6.327143e-57	-8.615850e-47
Msa0128860	Msa0852390	0.805749	1.148660e-49	-8.615850e-47
Msa0137990	Msa0852390	0.813486	2.498679e-51	-8.615850e-47
Msa0142950	Msa0852390	0.827186	1.798103e-54	-8.615850e-47
Msa0148100	Msa0852390	0.808196	3.487403e-50	-8.615850e-47
Msa0149390	Msa0852390	0.805763	1.140781e-49	-8.615850e-47
Msa0165950	Msa0852390	0.817186	3.757301e-52	-8.615850e-47
Msa0166750	Msa0852390	0.820125	8.090355e-53	-8.615850e-47
Msa0167480	Msa0852390	0.808233	3.424583e-50	-8.615850e-47
Msa0174730	Msa0852390	0.803694	3.085339e-49	-8.615850e-47
Msa0182280	Msa0852390	0.806854	6.718855e-50	-8.615850e-47
Msa0183460	Msa0852390	0.815997	6.937555e-52	-8.615850e-47
Msa0183900	Msa0852390	0.824764	6.763443e-54	-8.615850e-47
Msa0191050	Msa0852390	0.812429	4.258761e-51	-8.615850e-47
Msa0194480	Msa0852390	0.802085	6.631351e-49	-8.615850e-47
Msa0199690	Msa0852390	0.814730	1.327654e-51	-8.615850e-47
Msa0199880	Msa0852390	0.812210	4.755189e-51	-8.615850e-47
Msa0211860	Msa0852390	0.800828	1.199985e-48	-8.615850e-47
Msa0219250	Msa0852390	-0.801828	7.488642e-49	-8.615850e-47
Msa0226460	Msa0852390	0.801862	7.370050e-49	-8.615850e-47
Msa0226470	Msa0852390	0.817334	3.480271e-52	-8.615850e-47
Msa0227400	Msa0852390	0.814058	1.868751e-51	-8.615850e-47
Msa0231880	Msa0852390	0.809844	1.547583e-50	-8.615850e-47
Msa0233350	Msa0852390	0.820626	6.208609e-53	-8.615850e-47
Msa0236270	Msa0852390	0.811069	8.419584e-51	-8.615850e-47
Msa0237410	Msa0852390	0.801807	7.564839e-49	-8.615850e-47
Msa0366890	Msa0852390	0.811628	6.366340e-51	-8.615850e-47
Msa0369050	Msa0852390	0.800239	1.582445e-48	-8.615850e-47
Msa0376300	Msa0852390	0.808536	2.952078e-50	-8.615850e-47
Msa0376310	Msa0852390	0.802569	5.272307e-49	-8.615850e-47
Msa0376690	Msa0852390	0.829713	4.412379e-55	-8.615850e-47
Msa0392940	Msa0852390	0.804459	2.137987e-49	-8.615850e-47
Msa0394400	Msa0852390	0.808235	3.421910e-50	-8.615850e-47
Msa0402330	Msa0852390	0.827140	1.844114e-54	-8.615850e-47
Msa0405650	Msa0852390	0.803595	3.234313e-49	-8.615850e-47
Msa0414800	Msa0852390	0.809340	1.985588e-50	-8.615850e-47
Msa0443390	Msa0852390	0.816714	4.795743e-52	-8.615850e-47
Msa0453230	Msa0852390	0.822123	2.803557e-53	-8.615850e-47
Msa0458060	Msa0852390	0.823477	1.356349e-53	-8.615850e-47
Msa0465550	Msa0852390	0.825835	3.774326e-54	-8.615850e-47
Msa0471590	Msa0852390	0.817289	3.563216e-52	-8.615850e-47
Msa0481480	Msa0852390	0.802085	6.631351e-49	-8.615850e-47
Msa0239450	Msa0852390	0.815756	7.854996e-52	-8.615850e-47
Msa0255080	Msa0852390	0.800471	1.419206e-48	-8.615850e-47
Msa0258880	Msa0852390	-0.803674	3.115197e-49	-8.615850e-47
Msa0262310	Msa0852390	0.803231	3.846755e-49	-8.615850e-47
Msa0275360	Msa0852390	0.814273	1.675402e-51	-8.615850e-47
Msa0280430	Msa0852390	0.829386	5.300232e-55	-8.615850e-47
Msa0291520	Msa0852390	0.822542	2.240176e-53	-8.615850e-47
Msa0304590	Msa0852390	0.837592	4.746070e-57	-8.615850e-47
Msa0304660	Msa0852390	0.836018	1.196771e-56	-8.615850e-47
Msa0331700	Msa0852390	0.835092	2.052173e-56	-8.615850e-47
Msa0337650	Msa0852390	0.805140	1.541193e-49	-8.615850e-47
Msa0355270	Msa0852390	0.826282	2.954921e-54	-8.615850e-47
Msa0360990	Msa0852390	0.833977	3.911687e-56	-8.615850e-47
Msa0484290	Msa0852390	0.804288	2.321126e-49	-8.615850e-47
Msa0484740	Msa0852390	0.810805	9.600561e-51	-8.615850e-47
Msa0508590	Msa0852390	0.804048	2.604760e-49	-8.615850e-47
Msa0508630	Msa0852390	0.801808	7.560335e-49	-8.615850e-47
Msa0534900	Msa0852390	0.805209	1.491079e-49	-8.615850e-47
Msa0546360	Msa0852390	0.813986	1.939119e-51	-8.615850e-47
Msa0550570	Msa0852390	0.808007	3.825641e-50	-8.615850e-47
Msa0556790	Msa0852390	0.832168	1.102434e-55	-8.615850e-47
Msa0560470	Msa0852390	0.803338	3.655520e-49	-8.615850e-47
Msa0581070	Msa0852390	0.814601	1.417997e-51	-8.615850e-47
Msa0847080	Msa0852390	0.822649	2.115821e-53	-8.615850e-47
Msa0852390	Msa0862500	0.808109	3.640594e-50	-8.615850e-47
Msa0852390	Msa0863870	0.808752	2.654290e-50	-8.615850e-47
Msa0852390	Msa0864010	0.804055	2.595614e-49	-8.615850e-47
Msa0852390	Msa0902760	0.808643	2.799777e-50	-8.615850e-47
Msa0852390	Msa0906780	0.800285	1.548261e-48	-8.615850e-47
Msa0852390	Msa0959840	0.809309	2.016772e-50	-8.615850e-47
Msa0852390	Msa0960830	0.811038	8.547543e-51	-8.615850e-47
Msa0852390	Msa0967370	0.800358	1.496137e-48	-8.615850e-47
Msa0852390	Msa0970030	0.820735	5.863359e-53	-8.615850e-47
Msa0852390	Msa1006840	0.812210	4.754843e-51	-8.615850e-47
Msa0852390	Msa1013040	0.821589	3.725894e-53	-8.615850e-47
Msa0852390	Msa1019240	0.824582	7.467061e-54	-8.615850e-47
Msa0852390	Msa1019260	0.824672	7.108654e-54	-8.615850e-47
Msa0852390	Msa1040400	0.805858	1.089783e-49	-8.615850e-47
Msa0852390	Msa1046020	0.807030	6.166697e-50	-8.615850e-47
Msa0852390	Msa1046060	0.801521	8.658755e-49	-8.615850e-47
Msa0852390	Msa1073900	0.808836	2.546933e-50	-8.615850e-47
Msa0852390	Msa1077030	0.801131	1.040763e-48	-8.615850e-47
Msa0852390	Msa1084470	0.810656	1.034331e-50	-8.615850e-47
Msa0852390	Msa1091100	0.805616	1.225023e-49	-8.615850e-47
Msa0852390	Msa1093330	0.817776	2.767109e-52	-8.615850e-47
Msa0852390	Msa1093530	0.803185	3.932162e-49	-8.615850e-47
Msa0852390	Msa1096230	0.815069	1.116512e-51	-8.615850e-47
Msa0852390	Msa1104140	0.813721	2.217340e-51	-8.615850e-47
Msa0852390	Msa1104210	0.805836	1.101168e-49	-8.615850e-47
Msa0852390	Msa1126510	0.817219	3.693303e-52	-8.615850e-47
Msa0852390	Msa1126770	0.808276	3.352940e-50	-8.615850e-47
Msa0852390	Msa1131560	0.803522	3.348414e-49	-8.615850e-47
Msa0852390	Msa1134090	0.808173	3.527686e-50	-8.615850e-47
Msa0852390	Msa1165870	0.812434	4.247814e-51	-8.615850e-47
Msa0852390	Msa1166330	0.828358	9.399148e-55	-8.615850e-47
Msa0852390	Msa1166340	0.828954	6.746457e-55	-8.615850e-47
Msa0852390	Msa1166860	0.810707	1.008188e-50	-8.615850e-47
Msa0852390	Msa1166870	0.834802	2.428042e-56	-8.615850e-47
Msa0852390	Msa1171870	0.808792	2.602669e-50	-8.615850e-47
Msa0852390	Msa1179950	0.829133	6.104772e-55	-8.615850e-47
Msa0852390	Msa1179980	0.826232	3.037218e-54	-8.615850e-47
Msa0852390	Msa1184370	0.818164	2.260866e-52	-8.615850e-47
Msa0852390	Msa1193950	-0.807609	4.649964e-50	-8.615850e-47
Msa0852390	Msa1201830	0.820773	5.744995e-53	-8.615850e-47
Msa0852390	Msa1202580	0.802606	5.179769e-49	-8.615850e-47
Msa0852390	Msa1204250	0.806349	8.590989e-50	-8.615850e-47
Msa0852390	Msa1207270	0.820374	7.094870e-53	-8.615850e-47
Msa0852390	Msa1218600	0.809784	1.594627e-50	-8.615850e-47
Msa0852390	Msa1227690	0.822362	2.466785e-53	-8.615850e-47
Msa0852390	Msa1237940	0.821691	3.528806e-53	-8.615850e-47
Msa0852390	Msa1254710	0.801926	7.150502e-49	-8.615850e-47
Msa0852390	Msa1255040	-0.800129	1.665790e-48	-8.615850e-47
Msa0852390	Msa1265630	0.817844	2.671360e-52	-8.615850e-47
Msa0852390	Msa1270620	0.826591	2.494657e-54	-8.615850e-47
Msa0852390	Msa1270690	0.820759	5.788984e-53	-8.615850e-47
Msa0852390	Msa1271580	0.802030	6.807647e-49	-8.615850e-47
Msa0852390	Msa1294840	0.819854	9.330372e-53	-8.615850e-47
Msa0852390	Msa1295110	0.811462	6.916053e-51	-8.615850e-47
Msa0852390	Msa1295490	-0.818805	1.618103e-52	-8.615850e-47
Msa0852390	Msa1304820	0.819134	1.362271e-52	-8.615850e-47
Msa0852390	Msa1306430	0.807080	6.018114e-50	-8.615850e-47
Msa0852390	Msa1306990	0.833194	6.136183e-56	-8.615850e-47
Msa0852390	Msa1307950	0.825458	4.635859e-54	-8.615850e-47
Msa0852390	Msa1333110	0.806875	6.650008e-50	-8.615850e-47
Msa0852390	Msa1335940	0.802102	6.580093e-49	-8.615850e-47
Msa0852390	Msa1336560	0.805810	1.115351e-49	-8.615850e-47
Msa0852390	Msa1355700	0.825448	4.660994e-54	-8.615850e-47
Msa0852390	Msa1356440	0.817686	2.899508e-52	-8.615850e-47
Msa0852390	Msa1362420	0.810842	9.427402e-51	-8.615850e-47
Msa0852390	Msa1376650	0.806162	9.402293e-50	-8.615850e-47
Msa0852390	Msa1379760	0.810676	1.024136e-50	-8.615850e-47
Msa0852390	Msa1394290	0.810114	1.353635e-50	-8.615850e-47
Msa0852390	Msa1397810	0.825829	3.787341e-54	-8.615850e-47
Msa0852390	Msa1420990	0.802491	5.471430e-49	-8.615850e-47
Msa0852390	Msa1442850	0.813689	2.254167e-51	-8.615850e-47
Msa0852390	Msa1444310	0.821154	4.694259e-53	-8.615850e-47
Msa0852390	Msa1450280	0.807939	3.956945e-50	-8.615850e-47
Msa0852390	Msa1454680	0.822329	2.510355e-53	-8.615850e-47
Msa0852390	Msa1461280	0.830276	3.216907e-55	-8.615850e-47
Msa0852390	Msa1461490	0.802576	5.255333e-49	-8.615850e-47
Msa0852390	Msa1465080	0.805271	1.447117e-49	-8.615850e-47
Msa0852390	Msa1466300	0.833368	5.551101e-56	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0852390	MtrunA17_Chr5g0428771	100.000	153	0	0	1	153	1	153	9.21e-114	318

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0852390	AT1G04635.1	61.184	152	54	2	3	153	4	151	9.41e-66	197

Find 73 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATAGCATCTTGGTGAATTT+TGG	0.109041	5_4:-43473274	Msa0852390:CDS
GTTTGTTCTGATTGTAATTT+TGG	0.140549	5_4:-43473967	Msa0852390:five_prime_UTR
TAACAATTTGTTTAAATTTC+GGG	0.172170	5_4:-43474015	Msa0852390:five_prime_UTR
GTGTTTACTTTGTCTGGTTT+GGG	0.195469	5_4:-43473945	Msa0852390:five_prime_UTR
CTAATGTACTATAGTCTTAA+TGG	0.211551	5_4:-43470489	Msa0852390:three_prime_UTR
ATAACAATTTGTTTAAATTT+CGG	0.213236	5_4:-43474016	Msa0852390:five_prime_UTR
GTGTGGTTTGGCTGCATCAC+TGG	0.252366	5_4:-43473248	Msa0852390:CDS
CGAGAATCCGGAGGAGGTTT+TGG	0.254330	5_4:-43474123	Msa0852390:five_prime_UTR
GGTGTTTACTTTGTCTGGTT+TGG	0.261224	5_4:-43473946	Msa0852390:five_prime_UTR
ATCTATAGTTACAGGCTTAC+AGG	0.265987	5_4:-43470617	Msa0852390:three_prime_UTR
TCAAGACTATCTATAGTTAC+AGG	0.267411	5_4:-43470625	Msa0852390:three_prime_UTR
TTTAATTTGCTTGATTTATC+TGG	0.270551	5_4:-43472971	Msa0852390:intron
CTTTGGTTCAGGAAATTTAC+AGG	0.272476	5_4:-43470973	Msa0852390:intron
GTCTGTGTTCAATCACAAAT+TGG	0.274240	5_4:-43470808	Msa0852390:three_prime_UTR
ATTTGAGCAGTTCAAACTTA+TGG	0.275431	5_4:-43470913	Msa0852390:CDS
TCTTGCTAAGATCGAAGTTT+TGG	0.279590	5_4:-43470844	Msa0852390:CDS
TCACTAATGTGTGCATCATT+AGG	0.290850	5_4:-43473069	Msa0852390:CDS
AGGTTGGTTAGCTGCAATTT+AGG	0.293189	5_4:+43474100	None:intergenic
TACACAGACTTCACTGTTCC+TGG	0.309387	5_4:+43473856	None:intergenic
CCCGCCGCTTGGTCCTTGTT+AGG	0.311025	5_4:+43473343	None:intergenic
CACAAATTGGCCACAACTCT+TGG	0.337659	5_4:-43470795	Msa0852390:three_prime_UTR
TCAAGCAAATTAAACACAAC+TGG	0.340230	5_4:+43472980	None:intergenic
CTTGCTTCAATTTGTTAGTC+AGG	0.340332	5_4:+43470512	None:intergenic
CACTAATGTGTGCATCATTA+GGG	0.362836	5_4:-43473068	Msa0852390:CDS
GATGGAGCTTATACCATTCA+TGG	0.376840	5_4:+43470569	None:intergenic
TAGAAAATGCTGCTATCTCC+TGG	0.379620	5_4:-43470312	Msa0852390:three_prime_UTR
CTGCTTAGCTGCGGCCTGCG+CGG	0.409986	5_4:+43473818	None:intergenic
TGCTTAGCTGCGGCCTGCGC+GGG	0.412901	5_4:+43473819	None:intergenic
ATCACAATGGTCAGAAGTAT+TGG	0.427749	5_4:-43473010	Msa0852390:CDS
TGTTTGCAGATTTGCGACTT+TGG	0.440494	5_4:+43473789	None:intergenic
ATGATGCACACATTAGTGAT+TGG	0.442861	5_4:+43473073	None:intergenic
ACCTCCATTGTAACCATGAA+TGG	0.479248	5_4:-43470582	Msa0852390:three_prime_UTR
TAGTGAAGAGCCAGTGGAGA+GGG	0.487108	5_4:-43473763	Msa0852390:five_prime_UTR
ATTTAGGCCAAAACCTCCTC+CGG	0.487633	5_4:+43474116	None:intergenic
TCGCAGAGATATCGAGAATC+CGG	0.491532	5_4:-43474135	Msa0852390:five_prime_UTR
GCATCACTGGGATCATTTCA+AGG	0.508076	5_4:-43473235	Msa0852390:intron
TGTTTACTTTGTCTGGTTTG+GGG	0.510789	5_4:-43473944	Msa0852390:five_prime_UTR
GTCTGTCTGTACTAGAATGA+TGG	0.511160	5_4:+43470551	None:intergenic
GGGTTCTAGGAAAAGGGTGA+TGG	0.511596	5_4:-43473407	Msa0852390:intron
TGTGGTTTGGCTGCATCACT+GGG	0.515656	5_4:-43473247	Msa0852390:CDS
TGCTATAAAAGATAGCATCT+TGG	0.524489	5_4:-43473284	Msa0852390:CDS
GAGCAGTTCAAACTTATGGT+TGG	0.536131	5_4:-43470909	Msa0852390:CDS
TAATAGAATCACCCGCCGCT+TGG	0.540293	5_4:+43473332	None:intergenic
GTTTACTTTGTCTGGTTTGG+GGG	0.548714	5_4:-43473943	Msa0852390:five_prime_UTR
AATACTTCTGACCATTGTGA+TGG	0.548904	5_4:+43473012	None:intergenic
TCTATAGTTACAGGCTTACA+GGG	0.552556	5_4:-43470616	Msa0852390:three_prime_UTR
CCTAACAAGGACCAAGCGGC+GGG	0.555344	5_4:-43473343	Msa0852390:CDS
TATACCATTCATGGTTACAA+TGG	0.564761	5_4:+43470578	None:intergenic
ATTTAAACTTCCAAGAGTTG+TGG	0.568256	5_4:+43470785	Msa0852400:intron
GACTGCTGCATTAAAGTGTG+AGG	0.576828	5_4:-43470943	Msa0852390:CDS
ACCATTCATGGTTACAATGG+AGG	0.580680	5_4:+43470581	None:intergenic
ATGTAACTACACCATATGCT+AGG	0.583964	5_4:+43470681	Msa0852400:intron
AGAAAATGCTGCTATCTCCT+GGG	0.591464	5_4:-43470311	Msa0852390:three_prime_UTR
TCTCCACTGGCTCTTCACTA+CGG	0.593380	5_4:+43473766	None:intergenic
CTCGCACACATACATTGCCC+AGG	0.603017	5_4:+43470294	None:intergenic
GTGAAGAGCCAGTGGAGAGG+GGG	0.605523	5_4:-43473761	Msa0852390:intron
CAAGCAAATTAAACACAACT+GGG	0.605699	5_4:+43472981	None:intergenic
AGCATTGTAGCATAAATGCA+AGG	0.609452	5_4:+43474067	None:intergenic
AGATATCGAGAATCCGGAGG+AGG	0.610044	5_4:-43474129	Msa0852390:five_prime_UTR
TCCTAACAAGGACCAAGCGG+CGG	0.612927	5_4:-43473344	Msa0852390:CDS
AAACAGATACATGGTGATGG+AGG	0.614082	5_4:-43473377	Msa0852390:CDS
CATTCTAGTACAGACAGACA+TGG	0.626237	5_4:-43470547	Msa0852390:three_prime_UTR
TTACAGGCTTACAGGGGACA+TGG	0.637149	5_4:-43470609	Msa0852390:three_prime_UTR
TAATATTGAGTTGATACACC+AGG	0.637963	5_4:-43473874	Msa0852390:five_prime_UTR
AGTGAAGAGCCAGTGGAGAG+GGG	0.641316	5_4:-43473762	Msa0852390:five_prime_UTR
ACACCGTAGTGAAGAGCCAG+TGG	0.651530	5_4:-43473769	Msa0852390:five_prime_UTR
GTAGTGAAGAGCCAGTGGAG+AGG	0.658713	5_4:-43473764	Msa0852390:five_prime_UTR
TGGTGATCGATTATCAGCTG+AGG	0.675265	5_4:-43470889	Msa0852390:CDS
GAATCCTAACAAGGACCAAG+CGG	0.677581	5_4:-43473347	Msa0852390:CDS
TGGCACAAACTGCTTAGCTG+CGG	0.678726	5_4:+43473809	None:intergenic
AGTATGGGCTTCCATCACAA+TGG	0.688002	5_4:-43473023	Msa0852390:CDS
CAGAGATATCGAGAATCCGG+AGG	0.697342	5_4:-43474132	Msa0852390:five_prime_UTR
CTATAGTTACAGGCTTACAG+GGG	0.739906	5_4:-43470615	Msa0852390:three_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATAACAATTTGTTTAAATTT+CGG	-	chr5_4:43470368-43470387	Msa0852390:three_prime_UTR	10.0%
!!!	ATTTTATGTTTTTTTAATAG+GGG	-	chr5_4:43470678-43470697	Msa0852390:three_prime_UTR	10.0%
!!!	TAATTATTATTATCATTTTG+GGG	-	chr5_4:43470711-43470730	Msa0852390:three_prime_UTR	10.0%
!!!	TATTTTGTATAATGTTTATT+TGG	+	chr5_4:43471787-43471806	Msa0852400:CDS	10.0%
!!!	TAACAATTTGTTTAAATTTC+GGG	-	chr5_4:43470369-43470388	Msa0852390:three_prime_UTR	15.0%
!!!	AATTATTATTATCATTTTGG+GGG	-	chr5_4:43470712-43470731	Msa0852390:three_prime_UTR	15.0%
!!!	TAATTTGAAAACTTTGATTT+TGG	-	chr5_4:43470956-43470975	Msa0852390:CDS	15.0%
!!!	AATTTGAAAACTTTGATTTT+GGG	-	chr5_4:43470957-43470976	Msa0852390:CDS	15.0%
!!	TTATACAAAATATGAAATGA+AGG	-	chr5_4:43471795-43471814	Msa0852390:intron	15.0%
!!	AAAAGTCTATATGTATAAAT+AGG	+	chr5_4:43472333-43472352	None:intergenic	15.0%
!!!	GAAATAATTTAAAATCAGAT+AGG	+	chr5_4:43472734-43472753	None:intergenic	15.0%
!!	TATTAATTGAAAAGTAAGAA+AGG	+	chr5_4:43473180-43473199	None:intergenic	15.0%
!!!	CTCAATATTAAAAAAGTGTA+TGG	+	chr5_4:43470500-43470519	None:intergenic	20.0%
!!!	ATTATTATTATCATTTTGGG+GGG	-	chr5_4:43470713-43470732	Msa0852390:three_prime_UTR	20.0%
!!	TATTTAATATGTATAGACTG+TGG	-	chr5_4:43470844-43470863	Msa0852390:CDS	20.0%
!!!	TTTAATTTGCTTGATTTATC+TGG	-	chr5_4:43471413-43471432	Msa0852390:intron	20.0%
!!	TTATTCCAATATTGTCATAA+AGG	+	chr5_4:43471497-43471516	Msa0852400:intron	20.0%
!!	AATATTGGAATAACAGAAAA+GGG	-	chr5_4:43471504-43471523	Msa0852390:intron	20.0%
!!	AAAAGAAAATTGAGAAATTC+TGG	-	chr5_4:43471551-43471570	Msa0852390:intron	20.0%
!!!	ATATTGGTTATGAAATATGA+AGG	+	chr5_4:43472077-43472096	None:intergenic	20.0%
!!	TATTTCTTATACCAAAAGAA+AGG	+	chr5_4:43472133-43472152	None:intergenic	20.0%
!!	AAAATTAAAAATTCTCCTCA+TGG	-	chr5_4:43472485-43472504	Msa0852390:intron	20.0%
!!!	AAGTTGGTTGAAATAAAATT+TGG	+	chr5_4:43472536-43472555	None:intergenic	20.0%
!!!	CCAAAAATAATCTTGTTTTT+GGG	+	chr5_4:43472789-43472808	None:intergenic	20.0%
!!	AAATTGATAAAACAGAGAAA+AGG	+	chr5_4:43473301-43473320	None:intergenic	20.0%
!!!	AAATGCAAGGTTTTAAATGA+AGG	+	chr5_4:43470307-43470326	None:intergenic	25.0%
!!	GTTTGTTCTGATTGTAATTT+TGG	-	chr5_4:43470417-43470436	Msa0852390:three_prime_UTR	25.0%
!!!	TTATGTTTTTTTAATAGGGG+AGG	-	chr5_4:43470681-43470700	Msa0852390:three_prime_UTR	25.0%
!	TGAGAAAATTACTAAACAGA+AGG	+	chr5_4:43471219-43471238	Msa0852400:intron	25.0%
!!!	TTTGATAATTTTCTCACCTT+TGG	-	chr5_4:43471260-43471279	Msa0852390:intron	25.0%
!!	AGAAGAGTATGAAAAAGTAT+GGG	-	chr5_4:43471346-43471365	Msa0852390:intron	25.0%
!	CAAAAAAGGAAGGAAAAAAA+AGG	+	chr5_4:43471465-43471484	Msa0852400:intron	25.0%
!	CAATATTGGAATAACAGAAA+AGG	-	chr5_4:43471503-43471522	Msa0852390:intron	25.0%
!	ATATTGGAATAACAGAAAAG+GGG	-	chr5_4:43471505-43471524	Msa0852390:intron	25.0%
!!	TGTGTTAGATACTATTTTCA+TGG	-	chr5_4:43471528-43471547	Msa0852390:intron	25.0%
!!	ATACTGGTTATGAAATATGA+AGG	+	chr5_4:43471720-43471739	Msa0852400:CDS	25.0%
!	TTAAAGAAAAGTCTATCTCA+GGG	+	chr5_4:43471868-43471887	Msa0852400:CDS	25.0%
!	ATTAAAGAAAAGTCTATCTC+AGG	+	chr5_4:43471869-43471888	Msa0852400:CDS	25.0%
!!	TGAGATAGACTTTTCTTTAA+TGG	-	chr5_4:43471868-43471887	Msa0852390:intron	25.0%
!	TATTTCTCTATAGTCTATCT+CGG	+	chr5_4:43471897-43471916	None:intergenic	25.0%
!!!	TTTTGAGAAATCTATATACC+AGG	+	chr5_4:43471953-43471972	None:intergenic	25.0%
!	AAAAAAGTCCTGTTATATAG+AGG	-	chr5_4:43471970-43471989	Msa0852390:intron	25.0%
!	TTCTATTACCTCTATATAAC+AGG	+	chr5_4:43471981-43472000	None:intergenic	25.0%
!	TAAGAAATAATTCCCAAAAC+CGG	-	chr5_4:43472144-43472163	Msa0852390:intron	25.0%
!	TGAGAAATGATAAAGAGAAT+AGG	-	chr5_4:43472206-43472225	Msa0852390:intron	25.0%
!!!	AATAATCTTGTTTTTGGGAA+AGG	+	chr5_4:43472784-43472803	None:intergenic	25.0%
!!	CCCAAAAACAAGATTATTTT+TGG	-	chr5_4:43472786-43472805	Msa0852390:intron	25.0%
!!!	GCCAAAAATAATCTTGTTTT+TGG	+	chr5_4:43472790-43472809	None:intergenic	25.0%
!!	ATGATCAACACTATGTTTTT+AGG	-	chr5_4:43472981-43473000	Msa0852390:CDS	25.0%
!!!	TTTTTAGGTTACAACAATTC+AGG	-	chr5_4:43472996-43473015	Msa0852390:CDS	25.0%
!!!	TGAAATTTTTGGCAGAAAAT+TGG	-	chr5_4:43473088-43473107	Msa0852390:CDS	25.0%
!	GTAATATGCAAAACATGATA+AGG	+	chr5_4:43473230-43473249	None:intergenic	25.0%
!!	CTAATGTACTATAGTCTTAA+TGG	-	chr5_4:43473895-43473914	Msa0852390:five_prime_UTR	25.0%
!!!	ATTTTGGTGTTTACTTTGTC+TGG	-	chr5_4:43470433-43470452	Msa0852390:three_prime_UTR	30.0%
!!	TAATATTGAGTTGATACACC+AGG	-	chr5_4:43470510-43470529	Msa0852390:three_prime_UTR	30.0%
	TGAGACAATAAATTCCTAAG+TGG	-	chr5_4:43470750-43470769	Msa0852390:three_prime_UTR	30.0%
	CTTTACTTAATCAAGATCGT+TGG	+	chr5_4:43470893-43470912	Msa0852400:intron	30.0%
!!!	AAACTTTGATTTTGGGTTCT+AGG	-	chr5_4:43470964-43470983	Msa0852390:CDS	30.0%
!	GGTTTTTATGAATCCTAACA+AGG	-	chr5_4:43471028-43471047	Msa0852390:intron	30.0%
!	GATGCTATCTTTTATAGCAT+TGG	+	chr5_4:43471099-43471118	Msa0852400:intron	30.0%
	TGCTATAAAAGATAGCATCT+TGG	-	chr5_4:43471100-43471119	Msa0852390:intron	30.0%
!	ATAGCATCTTGGTGAATTTT+GGG	-	chr5_4:43471111-43471130	Msa0852390:intron	30.0%
	CTAAACAGAAGGAAAACAAT+AGG	+	chr5_4:43471208-43471227	Msa0852400:intron	30.0%
!	TAATTTTCTCACCTTTGGAT+CGG	-	chr5_4:43471265-43471284	Msa0852390:intron	30.0%
!	GAGAAGAGTATGAAAAAGTA+TGG	-	chr5_4:43471345-43471364	Msa0852390:intron	30.0%
	CAAGCAAATTAAACACAACT+GGG	+	chr5_4:43471406-43471425	Msa0852400:intron	30.0%
	TCAAGCAAATTAAACACAAC+TGG	+	chr5_4:43471407-43471426	Msa0852400:intron	30.0%
	GAACTCCTTTATGACAATAT+TGG	-	chr5_4:43471489-43471508	Msa0852390:intron	30.0%
!	TTCTGTTTCTTCTACATAAC+AGG	+	chr5_4:43471618-43471637	Msa0852400:intron	30.0%
	TTAATGATAACCCAAGATGA+GGG	+	chr5_4:43471749-43471768	Msa0852400:CDS	30.0%
	TCATCTTGGGTTATCATTAA+CGG	-	chr5_4:43471749-43471768	Msa0852390:intron	30.0%
	TTTACTATTACTCACGCTAT+CGG	+	chr5_4:43471837-43471856	Msa0852400:CDS	30.0%
	ATAGCGTGAGTAATAGTAAA+TGG	-	chr5_4:43471837-43471856	Msa0852390:intron	30.0%
	TAGCGTGAGTAATAGTAAAT+GGG	-	chr5_4:43471838-43471857	Msa0852390:intron	30.0%
	ATTTCTCTATAGTCTATCTC+GGG	+	chr5_4:43471896-43471915	None:intergenic	30.0%
	AAGAAATAATTCCCAAAACC+GGG	-	chr5_4:43472145-43472164	Msa0852390:intron	30.0%
	TAAGAGTTGTTAGTTAGTTG+AGG	+	chr5_4:43472361-43472380	None:intergenic	30.0%
	AGTAATAGATTTCAACCTTG+AGG	+	chr5_4:43472434-43472453	None:intergenic	30.0%
	TCGTTTCTCTGTAATAATGA+TGG	-	chr5_4:43472939-43472958	Msa0852390:intron	30.0%
!!	TTGATCATTCTTTTTAGCGA+TGG	+	chr5_4:43472969-43472988	None:intergenic	30.0%
	ACTAATAGATGACATGACTT+TGG	-	chr5_4:43473039-43473058	Msa0852390:CDS	30.0%
	TGGTTCATAGTAGTTTGATA+TGG	-	chr5_4:43473108-43473127	Msa0852390:intron	30.0%
	CATAGTAGTTTGATATGGTT+TGG	-	chr5_4:43473113-43473132	Msa0852390:intron	30.0%
!!	TAGTTTGATATGGTTTGGTA+GGG	-	chr5_4:43473118-43473137	Msa0852390:intron	30.0%
	TATCAATTTGATCTTGCCAT+TGG	-	chr5_4:43473312-43473331	Msa0852390:CDS	30.0%
	AAAAGATGGTATCATGCATA+TGG	+	chr5_4:43473338-43473357	None:intergenic	30.0%
!	CAAAGGTACAATTTCATATC+AGG	+	chr5_4:43473396-43473415	None:intergenic	30.0%
	CTGATATGAAATTGTACCTT+TGG	-	chr5_4:43473394-43473413	Msa0852390:exon	30.0%
	ATTTGAGCAGTTCAAACTTA+TGG	-	chr5_4:43473471-43473490	Msa0852390:intron	30.0%
	ATTTAAACTTCCAAGAGTTG+TGG	+	chr5_4:43473602-43473621	None:intergenic	30.0%
!	ATTGTAGTTTTCCTAGCATA+TGG	-	chr5_4:43473692-43473711	Msa0852390:intron	30.0%
!!	TGAAATTTTAAGCTTGCTCA+TGG	+	chr5_4:43473735-43473754	None:intergenic	30.0%
	TCAAGACTATCTATAGTTAC+AGG	-	chr5_4:43473759-43473778	Msa0852390:intron	30.0%
	TATACCATTCATGGTTACAA+TGG	+	chr5_4:43473809-43473828	None:intergenic	30.0%
!	GCATTTTCTGAATAACAGTA+TGG	+	chr5_4:43473965-43473984	None:intergenic	30.0%
!	AATGCTTGAAACATTTTGAG+TGG	-	chr5_4:43473980-43473999	Msa0852390:five_prime_UTR	30.0%
!!!	GCAAGGTTTTAAATGAAGGT+TGG	+	chr5_4:43470303-43470322	None:intergenic	35.0%
	AGCATTGTAGCATAAATGCA+AGG	+	chr5_4:43470320-43470339	None:intergenic	35.0%
!	GTGTTTACTTTGTCTGGTTT+GGG	-	chr5_4:43470439-43470458	Msa0852390:three_prime_UTR	35.0%
!	TGTTTACTTTGTCTGGTTTG+GGG	-	chr5_4:43470440-43470459	Msa0852390:three_prime_UTR	35.0%
!!	TGGGGGTATTCTAAGTAATT+AGG	-	chr5_4:43470458-43470477	Msa0852390:three_prime_UTR	35.0%
!!!	TGTTTTTTTAATAGGGGAGG+AGG	-	chr5_4:43470684-43470703	Msa0852390:three_prime_UTR	35.0%
!!	ATTATTATCATTTTGGGGGG+TGG	-	chr5_4:43470716-43470735	Msa0852390:three_prime_UTR	35.0%
!!	TTATTATCATTTTGGGGGGT+GGG	-	chr5_4:43470717-43470736	Msa0852390:three_prime_UTR	35.0%
!!!	TGATTTTGGGTTCTAGGAAA+AGG	-	chr5_4:43470970-43470989	Msa0852390:intron	35.0%
!!!	GATTTTGGGTTCTAGGAAAA+GGG	-	chr5_4:43470971-43470990	Msa0852390:intron	35.0%
	GGTGTTCAAAAACAGATACA+TGG	-	chr5_4:43470998-43471017	Msa0852390:intron	35.0%
	CAAAAACAGATACATGGTGA+TGG	-	chr5_4:43471004-43471023	Msa0852390:intron	35.0%
!	GATAGCATCTTGGTGAATTT+TGG	-	chr5_4:43471110-43471129	Msa0852390:intron	35.0%
!	TAGCATCTTGGTGAATTTTG+GGG	-	chr5_4:43471112-43471131	Msa0852390:intron	35.0%
	ATGATGCACACATTAGTGAT+TGG	+	chr5_4:43471314-43471333	Msa0852400:intron	35.0%
	TCACTAATGTGTGCATCATT+AGG	-	chr5_4:43471315-43471334	Msa0852390:intron	35.0%
	CACTAATGTGTGCATCATTA+GGG	-	chr5_4:43471316-43471335	Msa0852390:intron	35.0%
	AATACTTCTGACCATTGTGA+TGG	+	chr5_4:43471375-43471394	Msa0852400:intron	35.0%
!	ATCACAATGGTCAGAAGTAT+TGG	-	chr5_4:43471374-43471393	Msa0852390:intron	35.0%
	TAAGAGCAAATACTGCATGT+TGG	-	chr5_4:43471436-43471455	Msa0852390:intron	35.0%
	AAAGGAGTTCGCAACAAAAA+AGG	+	chr5_4:43471479-43471498	Msa0852400:intron	35.0%
	TAGATCAGGATAACAAGCAT+CGG	+	chr5_4:43471664-43471683	Msa0852400:intron	35.0%
	TTGCAAATGAGTGATAGATC+AGG	+	chr5_4:43471678-43471697	Msa0852400:CDS	35.0%
	TAATGATAACCCAAGATGAG+GGG	+	chr5_4:43471748-43471767	Msa0852400:CDS	35.0%
	GTTAATGATAACCCAAGATG+AGG	+	chr5_4:43471750-43471769	Msa0852400:CDS	35.0%
	TTTCTCTATAGTCTATCTCG+GGG	+	chr5_4:43471895-43471914	None:intergenic	35.0%
	TCTCTGTAATCATAAAGTCC+TGG	-	chr5_4:43471932-43471951	Msa0852390:intron	35.0%
	GAATGATAGATTCAAGTGAC+AGG	+	chr5_4:43472037-43472056	None:intergenic	35.0%
	TATGAAGGCTTTCAATTGTG+TGG	+	chr5_4:43472062-43472081	None:intergenic	35.0%
	CCAACAATAATCCACAATGA+GGG	+	chr5_4:43472105-43472124	None:intergenic	35.0%
!	CCTCATTGTGGATTATTGTT+GGG	-	chr5_4:43472103-43472122	Msa0852390:intron	35.0%
	TGAGGTATACTGCTATTGAA+AGG	-	chr5_4:43472182-43472201	Msa0852390:intron	35.0%
	AGTAGTGACTCTATTGTGAA+GGG	+	chr5_4:43472257-43472276	None:intergenic	35.0%
!!	TTGAGGATAAGGTTGTTTTG+CGG	+	chr5_4:43472417-43472436	None:intergenic	35.0%
	AGATTTCAACCTTGAGGATA+AGG	+	chr5_4:43472428-43472447	None:intergenic	35.0%
	TTACTGTCTTCTTGTTCCAT+TGG	-	chr5_4:43472449-43472468	Msa0852390:intron	35.0%
	TACTGTCTTCTTGTTCCATT+GGG	-	chr5_4:43472450-43472469	Msa0852390:intron	35.0%
!!!	TTTTTTTTCTCTGCACCCAA+TGG	+	chr5_4:43472468-43472487	None:intergenic	35.0%
	GCAACAATGCTGAAAAAACA+AGG	+	chr5_4:43472706-43472725	None:intergenic	35.0%
!!!	TGTTTTTGGGAAAGGAAGTT+AGG	+	chr5_4:43472776-43472795	None:intergenic	35.0%
	GGCAAAGAGAACATTTATGA+AGG	+	chr5_4:43472818-43472837	None:intergenic	35.0%
!!	GTAGTTTGATATGGTTTGGT+AGG	-	chr5_4:43473117-43473136	Msa0852390:intron	35.0%
	TCAGAGTTTCATTCAGATGA+TGG	+	chr5_4:43473278-43473297	None:intergenic	35.0%
	TCTCTGAGTGAAAGAAAAGA+TGG	+	chr5_4:43473352-43473371	None:intergenic	35.0%
!	TGAAATTGTACCTTTGGTTC+AGG	-	chr5_4:43473400-43473419	Msa0852390:exon	35.0%
	CTGTAAATTTCCTGAACCAA+AGG	+	chr5_4:43473413-43473432	None:intergenic	35.0%
!	CTTTGGTTCAGGAAATTTAC+AGG	-	chr5_4:43473411-43473430	Msa0852390:intron	35.0%
!	TCTTGCTAAGATCGAAGTTT+TGG	-	chr5_4:43473540-43473559	Msa0852390:intron	35.0%
	GTCTGTGTTCAATCACAAAT+TGG	-	chr5_4:43473576-43473595	Msa0852390:intron	35.0%
	ATGTAACTACACCATATGCT+AGG	+	chr5_4:43473706-43473725	None:intergenic	35.0%
	ATCTATAGTTACAGGCTTAC+AGG	-	chr5_4:43473767-43473786	Msa0852390:five_prime_UTR	35.0%
	TCTATAGTTACAGGCTTACA+GGG	-	chr5_4:43473768-43473787	Msa0852390:five_prime_UTR	35.0%
!!	CTTGCTTCAATTTGTTAGTC+AGG	+	chr5_4:43473875-43473894	None:intergenic	35.0%
!	AGGTTGGTTAGCTGCAATTT+AGG	+	chr5_4:43470287-43470306	None:intergenic	40.0%
	GGTGTTTACTTTGTCTGGTT+TGG	-	chr5_4:43470438-43470457	Msa0852390:three_prime_UTR	40.0%
!!	GTTTACTTTGTCTGGTTTGG+GGG	-	chr5_4:43470441-43470460	Msa0852390:three_prime_UTR	40.0%
	TGTTTGCAGATTTGCGACTT+TGG	+	chr5_4:43470598-43470617	Msa0852400:intron	40.0%
!!	TATTATCATTTTGGGGGGTG+GGG	-	chr5_4:43470718-43470737	Msa0852390:three_prime_UTR	40.0%
	AACCACTTCATTAGCACACA+TGG	-	chr5_4:43470808-43470827	Msa0852390:three_prime_UTR	40.0%
	ATCCATGTGTGCTAATGAAG+TGG	+	chr5_4:43470813-43470832	Msa0852400:intron	40.0%
!!	AAACAGATACATGGTGATGG+AGG	-	chr5_4:43471007-43471026	Msa0852390:intron	40.0%
	GAGTTCGCAACAAAAAAGGA+AGG	+	chr5_4:43471475-43471494	Msa0852400:intron	40.0%
	GAAATGAAGGTCAACACATC+AGG	-	chr5_4:43471808-43471827	Msa0852390:intron	40.0%
	AGTGACAGGATGATAAGCAT+TGG	+	chr5_4:43472023-43472042	None:intergenic	40.0%
	CACAATGAGGGAACGAATAT+TGG	+	chr5_4:43472093-43472112	None:intergenic	40.0%
	CAATATTCGTTCCCTCATTG+TGG	-	chr5_4:43472091-43472110	Msa0852390:intron	40.0%
!	CCCTCATTGTGGATTATTGT+TGG	-	chr5_4:43472102-43472121	Msa0852390:intron	40.0%
	CCCAACAATAATCCACAATG+AGG	+	chr5_4:43472106-43472125	None:intergenic	40.0%
!	TGTTGGGAACACCTTTCTTT+TGG	-	chr5_4:43472119-43472138	Msa0852390:intron	40.0%
!	TATCAATTCTGCCCGGTTTT+GGG	+	chr5_4:43472159-43472178	None:intergenic	40.0%
	CTCATTCTATCAATTCTGCC+CGG	+	chr5_4:43472166-43472185	None:intergenic	40.0%
	TATTGTGAAGGGAAAACCCT+TGG	+	chr5_4:43472246-43472265	None:intergenic	40.0%
	GAGTAGTGACTCTATTGTGA+AGG	+	chr5_4:43472258-43472277	None:intergenic	40.0%
	GCAAAACAACCTTATCCTCA+AGG	-	chr5_4:43472416-43472435	Msa0852390:intron	40.0%
	CAGTGCATAATTGCAGAAGT+TGG	+	chr5_4:43472671-43472690	None:intergenic	40.0%
!!	AGGTGATGGGTCTAATTCAA+TGG	+	chr5_4:43472756-43472775	None:intergenic	40.0%
	ACAACCTTCTCCAAAGATCT+TGG	+	chr5_4:43472847-43472866	None:intergenic	40.0%
	ACTGCAAAATGGCAAGTTAG+AGG	+	chr5_4:43472871-43472890	None:intergenic	40.0%
	ACCTTGTTGGAACTGCAAAA+TGG	+	chr5_4:43472882-43472901	None:intergenic	40.0%
	CACAAAGCTTCCTATGAAGA+GGG	-	chr5_4:43473062-43473081	Msa0852390:CDS	40.0%
	ACAAAGCTTCCTATGAAGAG+GGG	-	chr5_4:43473063-43473082	Msa0852390:CDS	40.0%
	AATTTCATCCCCCTCTTCAT+AGG	+	chr5_4:43473075-43473094	None:intergenic	40.0%
!	GAAGAGGGGGATGAAATTTT+TGG	-	chr5_4:43473077-43473096	Msa0852390:CDS	40.0%
	CATGATAAGGTGATGCATCA+AGG	+	chr5_4:43473217-43473236	None:intergenic	40.0%
	GAGCAGTTCAAACTTATGGT+TGG	-	chr5_4:43473475-43473494	Msa0852390:intron	40.0%
	CTATAGTTACAGGCTTACAG+GGG	-	chr5_4:43473769-43473788	Msa0852390:five_prime_UTR	40.0%
	ACCTCCATTGTAACCATGAA+TGG	-	chr5_4:43473802-43473821	Msa0852390:five_prime_UTR	40.0%
	ACCATTCATGGTTACAATGG+AGG	+	chr5_4:43473806-43473825	None:intergenic	40.0%
	GATGGAGCTTATACCATTCA+TGG	+	chr5_4:43473818-43473837	None:intergenic	40.0%
	GTCTGTCTGTACTAGAATGA+TGG	+	chr5_4:43473836-43473855	None:intergenic	40.0%
	CATTCTAGTACAGACAGACA+TGG	-	chr5_4:43473837-43473856	Msa0852390:five_prime_UTR	40.0%
	TAGAAAATGCTGCTATCTCC+TGG	-	chr5_4:43474072-43474091	Msa0852390:five_prime_UTR	40.0%
	AGAAAATGCTGCTATCTCCT+GGG	-	chr5_4:43474073-43474092	Msa0852390:five_prime_UTR	40.0%
	ATTTAGGCCAAAACCTCCTC+CGG	+	chr5_4:43470271-43470290	None:intergenic	45.0%
	TACACAGACTTCACTGTTCC+TGG	+	chr5_4:43470531-43470550	None:intergenic	45.0%
!!	ATTATCATTTTGGGGGGTGG+GGG	-	chr5_4:43470719-43470738	Msa0852390:three_prime_UTR	45.0%
	TCGAGTTCGAATCTCCACTT+AGG	+	chr5_4:43470767-43470786	Msa0852400:intron	45.0%
	GAATCCTAACAAGGACCAAG+CGG	-	chr5_4:43471037-43471056	Msa0852390:intron	45.0%
!!	TTGGTGAATTTTGGGGAGTG+TGG	-	chr5_4:43471119-43471138	Msa0852390:intron	45.0%
!!	GAATTTTGGGGAGTGTGGTT+TGG	-	chr5_4:43471124-43471143	Msa0852390:intron	45.0%
	GCATCACTGGGATCATTTCA+AGG	-	chr5_4:43471149-43471168	Msa0852390:intron	45.0%
	AGTATGGGCTTCCATCACAA+TGG	-	chr5_4:43471361-43471380	Msa0852390:intron	45.0%
	AAGATGAGGGGACAACATAC+TGG	+	chr5_4:43471736-43471755	Msa0852400:CDS	45.0%
	AGTATGTTGTCCCCTCATCT+TGG	-	chr5_4:43471735-43471754	Msa0852390:intron	45.0%
	GTATGTTGTCCCCTCATCTT+GGG	-	chr5_4:43471736-43471755	Msa0852390:intron	45.0%
!	CTATCAATTCTGCCCGGTTT+TGG	+	chr5_4:43472160-43472179	None:intergenic	45.0%
	CGGGCAGAATTGATAGAATG+AGG	-	chr5_4:43472164-43472183	Msa0852390:intron	45.0%
	AGGAGATAATCTCTCCTCCA+AGG	-	chr5_4:43472226-43472245	Msa0852390:intron	45.0%
	GGAGATAATCTCTCCTCCAA+GGG	-	chr5_4:43472227-43472246	Msa0852390:intron	45.0%
	CCTTCATTAGCAACAGCAGT+GGG	+	chr5_4:43472599-43472618	None:intergenic	45.0%
	TCCTTCATTAGCAACAGCAG+TGG	+	chr5_4:43472600-43472619	None:intergenic	45.0%
	GGGAAAGGAAGTTAGGTGAT+GGG	+	chr5_4:43472769-43472788	None:intergenic	45.0%
	TGGGAAAGGAAGTTAGGTGA+TGG	+	chr5_4:43472770-43472789	None:intergenic	45.0%
!	TGTGCCAAGATCTTTGGAGA+AGG	-	chr5_4:43472840-43472859	Msa0852390:intron	45.0%
!!	GCCATTTTGCAGTTCCAACA+AGG	-	chr5_4:43472878-43472897	Msa0852390:intron	45.0%
	TCTTGATCTGCTCCATGTCA+GGG	-	chr5_4:43472901-43472920	Msa0852390:intron	45.0%
	GCACAAAGCTTCCTATGAAG+AGG	-	chr5_4:43473061-43473080	Msa0852390:CDS	45.0%
	CAAAGCTTCCTATGAAGAGG+GGG	-	chr5_4:43473064-43473083	Msa0852390:CDS	45.0%
	GGTATCATGCATATGGCCAA+TGG	+	chr5_4:43473331-43473350	None:intergenic	45.0%
	GACTGCTGCATTAAAGTGTG+AGG	-	chr5_4:43473441-43473460	Msa0852390:intron	45.0%
	TGGTGATCGATTATCAGCTG+AGG	-	chr5_4:43473495-43473514	Msa0852390:intron	45.0%
	CACAAATTGGCCACAACTCT+TGG	-	chr5_4:43473589-43473608	Msa0852390:intron	45.0%
!!!	TAATTTTATGTTTTTTTAAT+AGG	-	chr5_4:43470676-43470695	Msa0852390:three_prime_UTR	5.0%
!!!	AATTTTATGTTTTTTTAATA+GGG	-	chr5_4:43470677-43470696	Msa0852390:three_prime_UTR	5.0%
!!!	TATAATTATTATTATCATTT+TGG	-	chr5_4:43470709-43470728	Msa0852390:three_prime_UTR	5.0%
!!!	ATAATTATTATTATCATTTT+GGG	-	chr5_4:43470710-43470729	Msa0852390:three_prime_UTR	5.0%
	CAGAGATATCGAGAATCCGG+AGG	-	chr5_4:43470252-43470271	Msa0852390:three_prime_UTR	50.0%
	AGATATCGAGAATCCGGAGG+AGG	-	chr5_4:43470255-43470274	Msa0852390:three_prime_UTR	50.0%
	TGGCACAAACTGCTTAGCTG+CGG	+	chr5_4:43470578-43470597	None:intergenic	50.0%
!!	TCTCCACTGGCTCTTCACTA+CGG	+	chr5_4:43470621-43470640	Msa0852400:intron	50.0%
	TAGTGAAGAGCCAGTGGAGA+GGG	-	chr5_4:43470621-43470640	Msa0852390:three_prime_UTR	50.0%
!!	GGGTTCTAGGAAAAGGGTGA+TGG	-	chr5_4:43470977-43470996	Msa0852390:intron	50.0%
	TAATAGAATCACCCGCCGCT+TGG	+	chr5_4:43471055-43471074	Msa0852400:intron	50.0%
!	TGTGGTTTGGCTGCATCACT+GGG	-	chr5_4:43471137-43471156	Msa0852390:intron	50.0%
	TGTGAAGGGAAAACCCTTGG+AGG	+	chr5_4:43472243-43472262	None:intergenic	50.0%
!!	GTTGTTTTGCGGACGAGTGA+CGG	+	chr5_4:43472406-43472425	None:intergenic	50.0%
	TTCGTCAAGCTCTCAGCAGT+CGG	+	chr5_4:43472513-43472532	None:intergenic	50.0%
	CCCACTGCTGTTGCTAATGA+AGG	-	chr5_4:43472596-43472615	Msa0852390:intron	50.0%
	AATCATTCCCAAGCGCCACA+TGG	-	chr5_4:43472621-43472640	Msa0852390:intron	50.0%
	ATCATTCCCAAGCGCCACAT+GGG	-	chr5_4:43472622-43472641	Msa0852390:intron	50.0%
	AACTTTCCCATGTGGCGCTT+GGG	+	chr5_4:43472631-43472650	None:intergenic	50.0%
	TCCAGCTGAACTTTCCCATG+TGG	+	chr5_4:43472639-43472658	None:intergenic	50.0%
	CTCCAAAGATCTTGGCACAG+CGG	+	chr5_4:43472839-43472858	None:intergenic	50.0%
	GGAGCAGATCAAGACCTTGT+TGG	+	chr5_4:43472895-43472914	None:intergenic	50.0%
	GTCTTGATCTGCTCCATGTC+AGG	-	chr5_4:43472900-43472919	Msa0852390:intron	50.0%
	TTACAGGCTTACAGGGGACA+TGG	-	chr5_4:43473775-43473794	Msa0852390:five_prime_UTR	50.0%
!	CGAGAATCCGGAGGAGGTTT+TGG	-	chr5_4:43470261-43470280	Msa0852390:three_prime_UTR	55.0%
!!	ATAGCTGTTTTGTCCCGCGC+AGG	-	chr5_4:43470552-43470571	Msa0852390:three_prime_UTR	55.0%
	ACACCGTAGTGAAGAGCCAG+TGG	-	chr5_4:43470615-43470634	Msa0852390:three_prime_UTR	55.0%
	GTAGTGAAGAGCCAGTGGAG+AGG	-	chr5_4:43470620-43470639	Msa0852390:three_prime_UTR	55.0%
	AGTGAAGAGCCAGTGGAGAG+GGG	-	chr5_4:43470622-43470641	Msa0852390:three_prime_UTR	55.0%
	TCCTAACAAGGACCAAGCGG+CGG	-	chr5_4:43471040-43471059	Msa0852390:intron	55.0%
!	GTGTGGTTTGGCTGCATCAC+TGG	-	chr5_4:43471136-43471155	Msa0852390:intron	55.0%
	GACTGCACACACCGATCCAA+AGG	+	chr5_4:43471279-43471298	Msa0852400:intron	55.0%
	CGGACGAGTGACGGTGTAAT+GGG	+	chr5_4:43472397-43472416	None:intergenic	55.0%
!	GGACGACTGGGATCTGAAGT+TGG	+	chr5_4:43472552-43472571	None:intergenic	55.0%
!	GCAAGTGCTGCAGCAAACTG+CGG	+	chr5_4:43472573-43472592	None:intergenic	55.0%
	GAACTTTCCCATGTGGCGCT+TGG	+	chr5_4:43472632-43472651	None:intergenic	55.0%
	GCCACATGGGAAAGTTCAGC+TGG	-	chr5_4:43472635-43472654	Msa0852390:intron	55.0%
	TGCCGCTGTGCCAAGATCTT+TGG	-	chr5_4:43472834-43472853	Msa0852390:intron	55.0%
	CTCGCACACATACATTGCCC+AGG	+	chr5_4:43474093-43474112	None:intergenic	55.0%
	GTGAAGAGCCAGTGGAGAGG+GGG	-	chr5_4:43470623-43470642	Msa0852390:three_prime_UTR	60.0%
!!	TCATTTTGGGGGGTGGGGGT+TGG	-	chr5_4:43470723-43470742	Msa0852390:three_prime_UTR	60.0%
	CCTAACAAGGACCAAGCGGC+GGG	-	chr5_4:43471041-43471060	Msa0852390:intron	60.0%
	GCGGACGAGTGACGGTGTAA+TGG	+	chr5_4:43472398-43472417	None:intergenic	60.0%
!	TCTCAGCAGTCGGCTCCATG+AGG	+	chr5_4:43472503-43472522	None:intergenic	60.0%
	GCAGCAAACTGCGGACGACT+GGG	+	chr5_4:43472564-43472583	None:intergenic	60.0%
	TGCAGCAAACTGCGGACGAC+TGG	+	chr5_4:43472565-43472584	None:intergenic	60.0%
	CCTCAGCAGAGTCCCTGACA+TGG	+	chr5_4:43472916-43472935	None:intergenic	60.0%
	CCATGTCAGGGACTCTGCTG+AGG	-	chr5_4:43472913-43472932	Msa0852390:intron	60.0%
	CACTCGTACCCCCTCTCCAC+TGG	+	chr5_4:43470634-43470653	Msa0852400:intron	65.0%
!	CAGTGGAGAGGGGGTACGAG+TGG	-	chr5_4:43470632-43470651	Msa0852390:three_prime_UTR	65.0%
!!	TTTTGGGGGGTGGGGGTTGG+TGG	-	chr5_4:43470726-43470745	Msa0852390:three_prime_UTR	65.0%
	CCCGCCGCTTGGTCCTTGTT+AGG	+	chr5_4:43471044-43471063	Msa0852400:intron	65.0%
	TGCTTAGCTGCGGCCTGCGC+GGG	+	chr5_4:43470568-43470587	None:intergenic	70.0%
	CTGCTTAGCTGCGGCCTGCG+CGG	+	chr5_4:43470569-43470588	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_4	gene	43470251	43474155	43470251	ID=Msa0852390;Name=Msa0852390
chr5_4	mRNA	43470251	43474155	43470251	ID=Msa0852390-mRNA-1;Parent=Msa0852390;Name=Msa0852390-mRNA-1;_AED=0.08;_eAED=0.08;_QI=404\|1\|1\|1\|0.66\|1\|4\|585\|153
chr5_4	exon	43470251	43470984	43470251	ID=Msa0852390-mRNA-1:exon:13751;Parent=Msa0852390-mRNA-1
chr5_4	exon	43472972	43473109	43472972	ID=Msa0852390-mRNA-1:exon:13750;Parent=Msa0852390-mRNA-1
chr5_4	exon	43473236	43473420	43473236	ID=Msa0852390-mRNA-1:exon:13749;Parent=Msa0852390-mRNA-1
chr5_4	exon	43473762	43474155	43473762	ID=Msa0852390-mRNA-1:exon:13748;Parent=Msa0852390-mRNA-1
chr5_4	five_prime_UTR	43473762	43474155	43473762	ID=Msa0852390-mRNA-1:five_prime_utr;Parent=Msa0852390-mRNA-1
chr5_4	five_prime_UTR	43473411	43473420	43473411	ID=Msa0852390-mRNA-1:five_prime_utr;Parent=Msa0852390-mRNA-1
chr5_4	CDS	43473236	43473410	43473236	ID=Msa0852390-mRNA-1:cds;Parent=Msa0852390-mRNA-1
chr5_4	CDS	43472972	43473109	43472972	ID=Msa0852390-mRNA-1:cds;Parent=Msa0852390-mRNA-1
chr5_4	CDS	43470836	43470984	43470836	ID=Msa0852390-mRNA-1:cds;Parent=Msa0852390-mRNA-1
chr5_4	three_prime_UTR	43470251	43470835	43470251	ID=Msa0852390-mRNA-1:three_prime_utr;Parent=Msa0852390-mRNA-1

Gene Sequence

>Msa0852390

ATGGTGTTCAAAAACAGATACATGGTGATGGAGGTTTTTATGAATCCTAACAAGGACCAAGCGGCGGGTGATTCTATTATAATTACGCAGTTTAATGTCTCCAATGCTATAAAAGATAGCATCTTGGTGAATTTTGGGGAGTGTGGTTTGGCTGCATCACTGGGATCATTTCAAGTCAAGTATGTGAATCCAATCACTAATGTGTGCATCATTAGGGCTTCAAGAGAAGAGTATGAAAAAGTATGGGCTTCCATCACAATGGTCAGAAGTATTGGAAATTTCCCAGTTGTGTTTAATTTGCTTGATTTATCTGGAAATTTACAGGCTACTAAGACTGCTGCATTAAAGTGTGAGGAAGCAAAATTTGAGCAGTTCAAACTTATGGTTGGTGATCGATTATCAGCTGAGGATACACATCGCATGAATAATCATCTTGCTAAGATCGAAGTTTTGGAGCATTGA

Protein sequence

>Msa0852390

MVFKNRYMVMEVFMNPNKDQAAGDSIIITQFNVSNAIKDSILVNFGECGLAASLGSFQVKYVNPITNVCIIRASREEYEKVWASITMVRSIGNFPVVFNLLDLSGNLQATKTAALKCEEAKFEQFKLMVGDRLSAEDTHRMNNHLAKIEVLEH*