AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047407.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047407.01.T01 MTR_4g126910 80.000 235 29 3 1 235 2 218 3.83e-128 366
MsG0880047407.01.T01 MTR_4g126910 80.000 235 29 3 1 235 2 218 1.39e-126 367
MsG0880047407.01.T01 MTR_4g126910 90.805 87 8 0 230 316 292 378 3.22e-49 168
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 64 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTTTGGCCTCGTTCTTA+TGG 0.166432 8:+85840805 MsG0880047407.01.T01:CDS
TGGTTTCCTGATAGCCATTT+TGG 0.203919 8:-85839151 None:intergenic
ATCTTTGGCCTCGTTCTTAT+GGG 0.226475 8:+85840806 MsG0880047407.01.T01:CDS
ATTCGCCCTGCTGACGTTAA+TGG 0.233739 8:+85840865 MsG0880047407.01.T01:CDS
TTGAAGCATTTCAGACTAAA+AGG 0.234226 8:+85838462 MsG0880047407.01.T01:CDS
CTCAATTTCTCCTCCCTTGA+AGG 0.247560 8:-85842109 None:intergenic
ATCTTACAGGGGAGCATCTT+TGG 0.274682 8:+85840791 MsG0880047407.01.T01:intron
CTTCAAAGGGGAATAGTAAT+TGG 0.307261 8:-85838445 None:intergenic
TACACGCAGTATCAACTTTC+CGG 0.310484 8:+85838104 MsG0880047407.01.T01:CDS
CACTGAGAGTTGTTCCAAAA+TGG 0.332819 8:+85839137 MsG0880047407.01.T01:CDS
CGGAGTATGTGAATCTTATA+TGG 0.339164 8:+85842188 MsG0880047407.01.T01:CDS
TGATAGACCAGAAGCTTCAT+TGG 0.369693 8:+85838958 MsG0880047407.01.T01:CDS
TGCTTTCCACATTATTAGAA+TGG 0.377837 8:+85842071 MsG0880047407.01.T01:CDS
GAAACTGGAAACGGAGGATT+AGG 0.388918 8:-85838157 None:intergenic
TACATTCCCAATGAAGCTTC+TGG 0.389428 8:-85838965 None:intergenic
ACAGGTGTGGGATGCTCTTA+AGG 0.395646 8:+85838916 MsG0880047407.01.T01:intron
TCAAACCGCCACTACTTGTC+GGG 0.402780 8:+85838052 MsG0880047407.01.T01:CDS
CCCTTACCATTAACGTCAGC+AGG 0.409584 8:-85840871 None:intergenic
TGGTGAATGTTGTTAGAAAC+TGG 0.410462 8:-85838172 None:intergenic
CAACTTTCCGGCGCGGCGGT+TGG 0.421785 8:+85838116 MsG0880047407.01.T01:CDS
TCCTCACATGCATAAGTAGA+AGG 0.433646 8:-85838417 None:intergenic
TTAGTCTGAAATGCTTCAAA+GGG 0.436352 8:-85838458 None:intergenic
GACTTACTATTCCATCCCTC+TGG 0.443630 8:-85839171 None:intergenic
GTTGTTCCAAAATGGCTATC+AGG 0.449836 8:+85839145 MsG0880047407.01.T01:CDS
TTTAGTCTGAAATGCTTCAA+AGG 0.471185 8:-85838459 None:intergenic
TTCAAACCGCCACTACTTGT+CGG 0.475885 8:+85838051 MsG0880047407.01.T01:CDS
TGAATGATGTGGAGCAATGA+TGG 0.497150 8:-85838511 None:intergenic
ATGAAGTAGATCCACCTTCA+AGG 0.498181 8:+85842095 MsG0880047407.01.T01:CDS
TTCATTCCATTCTAATAATG+TGG 0.499048 8:-85842077 None:intergenic
GATAGACCAGAAGCTTCATT+GGG 0.499403 8:+85838959 MsG0880047407.01.T01:CDS
GGATGGAATAGTAAGTCATC+TGG 0.502206 8:+85839177 MsG0880047407.01.T01:CDS
AATTTCTCCTCCCTTGAAGG+TGG 0.505594 8:-85842106 None:intergenic
TTGTGCAAATCAGTCAAAGA+TGG 0.511899 8:-85840841 None:intergenic
CATGCATAAGTAGAAGGAGT+TGG 0.513697 8:-85838411 None:intergenic
TTTCTAACAACATTCACCAT+TGG 0.514282 8:+85838176 MsG0880047407.01.T01:CDS
TTGTAGCATACTTTCTCAGT+CGG 0.518647 8:+85839283 MsG0880047407.01.T01:intron
ATTGCAGAAAACGGAGAGAT+GGG 0.521782 8:+85842046 MsG0880047407.01.T01:intron
TATTGCAGAAAACGGAGAGA+TGG 0.533665 8:+85842045 MsG0880047407.01.T01:intron
CATATAAGATTCACATACTC+CGG 0.541628 8:-85842187 None:intergenic
TACTCCGGATGATCAACAAA+AGG 0.542530 8:-85842172 None:intergenic
GGATAATCCAACCGCCGCGC+CGG 0.551390 8:-85838123 None:intergenic
GAGGATTAGGACGGCTTGCA+CGG 0.571755 8:-85838144 None:intergenic
TCCTTCTACTTATGCATGTG+AGG 0.574535 8:+85838416 MsG0880047407.01.T01:CDS
GAACTGTTCCCGACAAGTAG+TGG 0.580457 8:-85838060 None:intergenic
TGAAGTAGATCCACCTTCAA+GGG 0.586411 8:+85842096 MsG0880047407.01.T01:CDS
AGAAGGAGTTGGATATTCAG+AGG 0.600784 8:-85838400 None:intergenic
CTATCAGGAAACCAGAGGGA+TGG 0.603613 8:+85839160 MsG0880047407.01.T01:CDS
AACATGAATGACCTCTTGGT+AGG 0.607659 8:-85838538 None:intergenic
GGGACTCAATGGAACAAATG+TGG 0.631529 8:+85838289 MsG0880047407.01.T01:intron
TGGTAGGACAATGAATGATG+TGG 0.641618 8:-85838522 None:intergenic
TCATTCATTGTCCTACCAAG+AGG 0.643823 8:+85838527 MsG0880047407.01.T01:CDS
TAGTCTGAAATGCTTCAAAG+GGG 0.662090 8:-85838457 None:intergenic
GGGGAGTATCAAGTGACTTG+TGG 0.662339 8:-85838020 None:intergenic
ATGTTGTTAGAAACTGGAAA+CGG 0.664250 8:-85838166 None:intergenic
TTGTTAGAAACTGGAAACGG+AGG 0.667555 8:-85838163 None:intergenic
AGTAGATCCACCTTCAAGGG+AGG 0.669378 8:+85842099 MsG0880047407.01.T01:CDS
CTGTTCCCGACAAGTAGTGG+CGG 0.672425 8:-85838057 None:intergenic
GTATCAACTTTCCGGCGCGG+CGG 0.674326 8:+85838112 MsG0880047407.01.T01:CDS
ATGGCTATCAGGAAACCAGA+GGG 0.675831 8:+85839156 MsG0880047407.01.T01:CDS
CTGGAAACGGAGGATTAGGA+CGG 0.677054 8:-85838153 None:intergenic
CCTTACCATTAACGTCAGCA+GGG 0.678653 8:-85840870 None:intergenic
AATGGCTATCAGGAAACCAG+AGG 0.694203 8:+85839155 MsG0880047407.01.T01:CDS
GCAGTATCAACTTTCCGGCG+CGG 0.745739 8:+85838109 MsG0880047407.01.T01:CDS
GTTGTCAGCCCATAAGAACG+AGG 0.754084 8:-85840814 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATTAAAGAATTTAGA+AGG - Chr8:85841949-85841968 None:intergenic 10.0%
!! GTATTATAAAAAAATATATC+AGG - Chr8:85841774-85841793 None:intergenic 10.0%
!! ATTAGAATGAGAAAAAAAAA+AGG - Chr8:85838208-85838227 None:intergenic 15.0%
!! TAAACTGATATATAAATAAG+AGG - Chr8:85840744-85840763 None:intergenic 15.0%
!!! ACCTATTATTTCAATTTTTA+GGG + Chr8:85838269-85838288 MsG0880047407.01.T01:intron 15.0%
!!! ATATTGTTTTATGTTGAAAA+AGG + Chr8:85841860-85841879 MsG0880047407.01.T01:intron 15.0%
!!! TACCTATTATTTCAATTTTT+AGG + Chr8:85838268-85838287 MsG0880047407.01.T01:intron 15.0%
!! AATTGGAATTTGTAACAAAA+GGG + Chr8:85839307-85839326 MsG0880047407.01.T01:intron 20.0%
!! TAAATCTTTATTGCAGAAAA+CGG + Chr8:85842037-85842056 MsG0880047407.01.T01:intron 20.0%
!! TAATTGGAATTTGTAACAAA+AGG + Chr8:85839306-85839325 MsG0880047407.01.T01:intron 20.0%
!! TAGATTCAATTCTTATCAAT+TGG - Chr8:85840601-85840620 None:intergenic 20.0%
!! TATTAATCTTGCTTCTTATT+TGG + Chr8:85841715-85841734 MsG0880047407.01.T01:intron 20.0%
!! TCCCTAAAAATTGAAATAAT+AGG - Chr8:85838273-85838292 None:intergenic 20.0%
!! TGATAGAAATTAATAGGAAT+TGG + Chr8:85839782-85839801 MsG0880047407.01.T01:intron 20.0%
!! TGATATATAAATAAGAGGAA+AGG - Chr8:85840739-85840758 None:intergenic 20.0%
!! TTATGTAATTGTATCTTACA+GGG + Chr8:85840779-85840798 MsG0880047407.01.T01:intron 20.0%
!!! GATTTTGTTTTTGTAATAAC+AGG + Chr8:85838898-85838917 MsG0880047407.01.T01:intron 20.0%
!!! GTAAATTTTATCAGCATAAT+CGG + Chr8:85842146-85842165 MsG0880047407.01.T01:CDS 20.0%
!!! TTTTGGATAAGAACTTATAT+GGG - Chr8:85840692-85840711 None:intergenic 20.0%
! AAAATATATCAGGGATGAAA+AGG - Chr8:85841764-85841783 None:intergenic 25.0%
! AAATAAGAGGAAAGGAAAAT+TGG - Chr8:85840731-85840750 None:intergenic 25.0%
! AAGAAAAAAAATTAGGACGT+GGG + Chr8:85842272-85842291 MsG0880047407.01.T01:CDS 25.0%
! AAGTTTACAAGTAAGAAGAA+AGG - Chr8:85839932-85839951 None:intergenic 25.0%
! AATGAGAAAAAAAAAAGGCA+CGG - Chr8:85838203-85838222 None:intergenic 25.0%
! AATTGAGTATAAAATAGCTC+TGG + Chr8:85841911-85841930 MsG0880047407.01.T01:intron 25.0%
! ACTGAAAATTAATCCAACTA+AGG - Chr8:85841694-85841713 None:intergenic 25.0%
! ACTTGAAAAAAGAAGTAGTA+TGG - Chr8:85841383-85841402 None:intergenic 25.0%
! ATCAACCAAAATTGTAATGT+TGG - Chr8:85840918-85840937 None:intergenic 25.0%
! ATGACAATCAGAAACAAAAA+TGG - Chr8:85841105-85841124 None:intergenic 25.0%
! ATGATCAGCAATCAATTAAA+AGG - Chr8:85841136-85841155 None:intergenic 25.0%
! CAATTTATCCATAGCAAAAA+TGG - Chr8:85841896-85841915 None:intergenic 25.0%
! CAGCAATATATTAATTGTTC+AGG - Chr8:85841424-85841443 None:intergenic 25.0%
! CTTATGTAATTGTATCTTAC+AGG + Chr8:85840778-85840797 MsG0880047407.01.T01:intron 25.0%
! GAGATAAAATCTTAATGTCA+TGG - Chr8:85841274-85841293 None:intergenic 25.0%
! GAGTTTGAAAAATGATTGAA+GGG + Chr8:85841982-85842001 MsG0880047407.01.T01:intron 25.0%
! GCTCAATTTACAATAATGTT+TGG + Chr8:85841633-85841652 MsG0880047407.01.T01:intron 25.0%
! GTATGCTACAAAAAAAAAAG+AGG - Chr8:85839274-85839293 None:intergenic 25.0%
! TAGAAATGTAAAAAAACACC+AGG - Chr8:85840635-85840654 None:intergenic 25.0%
! TATGTAATTGTATCTTACAG+GGG + Chr8:85840780-85840799 MsG0880047407.01.T01:intron 25.0%
! TCAACCAAAATTGTAATGTT+GGG - Chr8:85840917-85840936 None:intergenic 25.0%
! TCCAACGAAGAAAAAAAATT+AGG + Chr8:85842265-85842284 MsG0880047407.01.T01:CDS 25.0%
! TGAGTTTGAAAAATGATTGA+AGG + Chr8:85841981-85842000 MsG0880047407.01.T01:intron 25.0%
! TTAACAGTTTCTGAACTTAA+AGG + Chr8:85839612-85839631 MsG0880047407.01.T01:intron 25.0%
! TTACATTTCTATTACATCCT+TGG + Chr8:85840644-85840663 MsG0880047407.01.T01:intron 25.0%
! TTATCTGAGCTATTATAGTT+AGG + Chr8:85841200-85841219 MsG0880047407.01.T01:intron 25.0%
! TTCATTCCATTCTAATAATG+TGG - Chr8:85842080-85842099 None:intergenic 25.0%
! TTCTGAACTTAAAGGAAATT+AGG + Chr8:85839620-85839639 MsG0880047407.01.T01:intron 25.0%
! TTCTTATCAATTGGTATCAA+AGG - Chr8:85840592-85840611 None:intergenic 25.0%
!! TTTTAGCGGTATTAATGTTA+AGG + Chr8:85839720-85839739 MsG0880047407.01.T01:intron 25.0%
!! TTTTCCCAACATTACAATTT+TGG + Chr8:85840910-85840929 MsG0880047407.01.T01:intron 25.0%
!!! ACAACTGATATTAATTTGCA+AGG - Chr8:85841325-85841344 None:intergenic 25.0%
!!! GTTTTGGATAAGAACTTATA+TGG - Chr8:85840693-85840712 None:intergenic 25.0%
!!! TAACTTGTTTTCATTTCTCA+TGG + Chr8:85838313-85838332 MsG0880047407.01.T01:CDS 25.0%
!!! TCCTAATTTTTTTTCTTCGT+TGG - Chr8:85842269-85842288 None:intergenic 25.0%
!!! TTCAAAGTGAAGGTTTTTTA+GGG - Chr8:85840009-85840028 None:intergenic 25.0%
AAAGGTCTACTATTAGAGTT+GGG - Chr8:85840574-85840593 None:intergenic 30.0%
AAAGTGGAACAAAGTAGAAT+TGG - Chr8:85840157-85840176 None:intergenic 30.0%
AGAAAAAAAATTAGGACGTG+GGG + Chr8:85842273-85842292 MsG0880047407.01.T01:CDS 30.0%
AGCTTTACAATTGTGTTTGT+TGG - Chr8:85838241-85838260 None:intergenic 30.0%
AGGGAGTGATAGAAATTAAT+AGG + Chr8:85839776-85839795 MsG0880047407.01.T01:intron 30.0%
ATAGCTCAGATAACTTATGA+AGG - Chr8:85841193-85841212 None:intergenic 30.0%
ATGTTGTTAGAAACTGGAAA+CGG - Chr8:85838169-85838188 None:intergenic 30.0%
ATTATGACCTATACTTGCAA+GGG + Chr8:85841656-85841675 MsG0880047407.01.T01:intron 30.0%
CAACACAAATCTTTCTACTT+TGG - Chr8:85839551-85839570 None:intergenic 30.0%
CATATAAGATTCACATACTC+CGG - Chr8:85842190-85842209 None:intergenic 30.0%
CTTGAAGTTAAAATAACCTC+AGG + Chr8:85841481-85841500 MsG0880047407.01.T01:intron 30.0%
GAAGAAAAAAAATTAGGACG+TGG + Chr8:85842271-85842290 MsG0880047407.01.T01:CDS 30.0%
GAATCTAATATAGAAGAACC+TGG + Chr8:85840614-85840633 MsG0880047407.01.T01:intron 30.0%
GTGTAATAGGAGAGATATAA+CGG - Chr8:85840117-85840136 None:intergenic 30.0%
GTTAAATGAACGTGAATTGT+TGG + Chr8:85841343-85841362 MsG0880047407.01.T01:intron 30.0%
TAAAAACATGAATGACCTCT+TGG - Chr8:85838545-85838564 None:intergenic 30.0%
TAACTTATGAAGGAATTACC+AGG - Chr8:85841183-85841202 None:intergenic 30.0%
TATAGTTAGGCATATCAGAT+GGG + Chr8:85841213-85841232 MsG0880047407.01.T01:intron 30.0%
TGCTTTCCACATTATTAGAA+TGG + Chr8:85842071-85842090 MsG0880047407.01.T01:CDS 30.0%
TTAAAATAACCTCAGGTTAG+AGG + Chr8:85841488-85841507 MsG0880047407.01.T01:intron 30.0%
TTATAGTTAGGCATATCAGA+TGG + Chr8:85841212-85841231 MsG0880047407.01.T01:intron 30.0%
TTTCTAACAACATTCACCAT+TGG + Chr8:85838176-85838195 MsG0880047407.01.T01:CDS 30.0%
TTTGATGAGCATGTCATTAA+TGG + Chr8:85839343-85839362 MsG0880047407.01.T01:intron 30.0%
! ATATTCTTTTGTCTTGCCTA+AGG + Chr8:85839693-85839712 MsG0880047407.01.T01:intron 30.0%
! ATCTGATCAAGTTCCTTTTT+AGG + Chr8:85839520-85839539 MsG0880047407.01.T01:intron 30.0%
! GTTTTTGTAATAACAGGTGT+GGG + Chr8:85838904-85838923 MsG0880047407.01.T01:intron 30.0%
! TATATATATGTTTGTTGCCG+CGG + Chr8:85838569-85838588 MsG0880047407.01.T01:intron 30.0%
! TCTTTTAGTGAACTCATCAA+GGG + Chr8:85840948-85840967 MsG0880047407.01.T01:intron 30.0%
! TTAGTCTGAAATGCTTCAAA+GGG - Chr8:85838461-85838480 None:intergenic 30.0%
! TTCTTTTAGTGAACTCATCA+AGG + Chr8:85840947-85840966 MsG0880047407.01.T01:intron 30.0%
! TTGAAGCATTTCAGACTAAA+AGG + Chr8:85838462-85838481 MsG0880047407.01.T01:CDS 30.0%
! TTGTTCATTTTCTCATTAGC+AGG - Chr8:85839501-85839520 None:intergenic 30.0%
! TTTAGTCTGAAATGCTTCAA+AGG - Chr8:85838462-85838481 None:intergenic 30.0%
!! GTTATTTTCCTAAGATATCC+AGG + Chr8:85838723-85838742 MsG0880047407.01.T01:intron 30.0%
!! TGTTTTTGTAATAACAGGTG+TGG + Chr8:85838903-85838922 MsG0880047407.01.T01:intron 30.0%
!! TTAGCTGATTTTTATATGCC+TGG + Chr8:85839083-85839102 MsG0880047407.01.T01:intron 30.0%
!! TTCAATTTTTAGGGACTCAA+TGG + Chr8:85838278-85838297 MsG0880047407.01.T01:intron 30.0%
!! TTCTAGTTTGAGATCAAGAT+GGG - Chr8:85840310-85840329 None:intergenic 30.0%
!! TTTTGGAAAGGAATTTAGAG+TGG - Chr8:85839885-85839904 None:intergenic 30.0%
!!! GTTCAAAGTGAAGGTTTTTT+AGG - Chr8:85840010-85840029 None:intergenic 30.0%
!!! TCAAAGTGAAGGTTTTTTAG+GGG - Chr8:85840008-85840027 None:intergenic 30.0%
AAAGTCTTCCATCAACATCA+TGG - Chr8:85840087-85840106 None:intergenic 35.0%
AAGAAAGACACCATGTTAAG+TGG - Chr8:85838997-85839016 None:intergenic 35.0%
ACCAGATTTCATGAATACCA+AGG - Chr8:85840664-85840683 None:intergenic 35.0%
ACCATATTTAAGGGTCTGTT+TGG - Chr8:85838853-85838872 None:intergenic 35.0%
AGAAGAAAGGAAGATTAGTG+AGG - Chr8:85839919-85839938 None:intergenic 35.0%
AGAGAGTAATCGCATAATTG+AGG + Chr8:85839661-85839680 MsG0880047407.01.T01:intron 35.0%
AGATTAGTGAGGGTTATCTT+TGG - Chr8:85839908-85839927 None:intergenic 35.0%
AGCATGTCATTAATGGAGAA+TGG + Chr8:85839350-85839369 MsG0880047407.01.T01:intron 35.0%
AGTAGAATTGGAACTATCAC+AGG - Chr8:85840145-85840164 None:intergenic 35.0%
ATACTTTCTCAGTCGGTAAT+TGG + Chr8:85839290-85839309 MsG0880047407.01.T01:intron 35.0%
ATAGTTAGGCATATCAGATG+GGG + Chr8:85841214-85841233 MsG0880047407.01.T01:intron 35.0%
ATCTTAATGTCATGGACAGA+TGG - Chr8:85841266-85841285 None:intergenic 35.0%
ATGTCATTAATGGAGAATGG+TGG + Chr8:85839353-85839372 MsG0880047407.01.T01:intron 35.0%
ATTAGCAGGTCGTCAAATAT+CGG - Chr8:85839487-85839506 None:intergenic 35.0%
CAAAGGTCTACTATTAGAGT+TGG - Chr8:85840575-85840594 None:intergenic 35.0%
CAAGCAGGTCATATTTATGT+CGG + Chr8:85841079-85841098 MsG0880047407.01.T01:intron 35.0%
CAAGCCAGTACCATATTTAA+GGG - Chr8:85838862-85838881 None:intergenic 35.0%
CAAGGAAAACATGATCAAAG+TGG - Chr8:85840173-85840192 None:intergenic 35.0%
CAATGCAAATCAGTATCTAG+AGG - Chr8:85840488-85840507 None:intergenic 35.0%
CGGAGTATGTGAATCTTATA+TGG + Chr8:85842188-85842207 MsG0880047407.01.T01:CDS 35.0%
CTACAAACTGTTCAAAGTGA+AGG - Chr8:85840019-85840038 None:intergenic 35.0%
CTTCAAAGGGGAATAGTAAT+TGG - Chr8:85838448-85838467 None:intergenic 35.0%
CTTGAGATTCTACTGATATC+TGG + Chr8:85841157-85841176 MsG0880047407.01.T01:intron 35.0%
GAAGAAAGGAAGATTAGTGA+GGG - Chr8:85839918-85839937 None:intergenic 35.0%
GACATAAATATGACCTGCTT+GGG - Chr8:85841080-85841099 None:intergenic 35.0%
GATGTTGCTCTTTGATTACT+TGG + Chr8:85839227-85839246 MsG0880047407.01.T01:intron 35.0%
GATTATGACCTATACTTGCA+AGG + Chr8:85841655-85841674 MsG0880047407.01.T01:intron 35.0%
GGTAAAATACATGCCTTAGT+TGG + Chr8:85841678-85841697 MsG0880047407.01.T01:intron 35.0%
GTAAATCGCATAAAACTCGA+TGG + Chr8:85839395-85839414 MsG0880047407.01.T01:intron 35.0%
GTAAATTGCAACATTAGTCG+AGG - Chr8:85841840-85841859 None:intergenic 35.0%
TACTTTGGCATGACCTAAAA+AGG - Chr8:85839536-85839555 None:intergenic 35.0%
TCCAAACAGACCCTTAAATA+TGG + Chr8:85838849-85838868 MsG0880047407.01.T01:intron 35.0%
TCCTTGGTATTCATGAAATC+TGG + Chr8:85840660-85840679 MsG0880047407.01.T01:intron 35.0%
TCTGCATATGATAAATCACC+AGG - Chr8:85839104-85839123 None:intergenic 35.0%
TGGTGAATGTTGTTAGAAAC+TGG - Chr8:85838175-85838194 None:intergenic 35.0%
TGTATGCATTCCACTTAACA+TGG + Chr8:85838984-85839003 MsG0880047407.01.T01:intron 35.0%
TTATGACCTATACTTGCAAG+GGG + Chr8:85841657-85841676 MsG0880047407.01.T01:intron 35.0%
TTGTAGCATACTTTCTCAGT+CGG + Chr8:85839283-85839302 MsG0880047407.01.T01:intron 35.0%
TTGTGCAAATCAGTCAAAGA+TGG - Chr8:85840844-85840863 None:intergenic 35.0%
! AGGTACTTCAGAGATTTGTT+TGG + Chr8:85839859-85839878 MsG0880047407.01.T01:intron 35.0%
! ATTTTACCCCTTGCAAGTAT+AGG - Chr8:85841666-85841685 None:intergenic 35.0%
! CACTTTGATCATGTTTTCCT+TGG + Chr8:85840171-85840190 MsG0880047407.01.T01:intron 35.0%
! CTTTTAGTGAACTCATCAAG+GGG + Chr8:85840949-85840968 MsG0880047407.01.T01:intron 35.0%
! GAATCCTTTTGTTGATCATC+CGG + Chr8:85842168-85842187 MsG0880047407.01.T01:CDS 35.0%
! TAGTCTGAAATGCTTCAAAG+GGG - Chr8:85838460-85838479 None:intergenic 35.0%
! TCTAGTTTGAGATCAAGATG+GGG - Chr8:85840309-85840328 None:intergenic 35.0%
! TGTTTCAAATAATGGAGCCT+GGG - Chr8:85840058-85840077 None:intergenic 35.0%
!! AAACAAATCTCTGAAGTACC+TGG - Chr8:85839860-85839879 None:intergenic 35.0%
!! CGAGTTTTATGCGATTTACA+CGG - Chr8:85839394-85839413 None:intergenic 35.0%
!! GGTTTTTCAGCTGTTTTGTT+TGG + Chr8:85839248-85839267 MsG0880047407.01.T01:intron 35.0%
!! GTTCTAGTTTGAGATCAAGA+TGG - Chr8:85840311-85840330 None:intergenic 35.0%
!! TTGCAACTCCATTTTTGCTA+TGG + Chr8:85841885-85841904 MsG0880047407.01.T01:intron 35.0%
!!! CAAAGTGAAGGTTTTTTAGG+GGG - Chr8:85840007-85840026 None:intergenic 35.0%
!!! GGTTATCTTTGGTTTTGGAA+AGG - Chr8:85839897-85839916 None:intergenic 35.0%
!!! GTTTTTTAGGGGGTATTCAA+GGG - Chr8:85839997-85840016 None:intergenic 35.0%
AAATTGGCGACGGTTAACTT+TGG - Chr8:85840715-85840734 None:intergenic 40.0%
AACATGAATGACCTCTTGGT+AGG - Chr8:85838541-85838560 None:intergenic 40.0%
AACGTCTCTCAAACATTCCA+CGG + Chr8:85838792-85838811 MsG0880047407.01.T01:intron 40.0%
AACTCAAGTTCTTCCACATG+AGG - Chr8:85840225-85840244 None:intergenic 40.0%
AAGATGGGGACTTGGAATAT+TGG - Chr8:85840295-85840314 None:intergenic 40.0%
AAGGGGAAACAAGTACTATG+GGG + Chr8:85840966-85840985 MsG0880047407.01.T01:intron 40.0%
AGAAGGAGTTGGATATTCAG+AGG - Chr8:85838403-85838422 None:intergenic 40.0%
AGATGGGGACTTGGAATATT+GGG - Chr8:85840294-85840313 None:intergenic 40.0%
AGATTTGGAAGGGACTGAAA+AGG - Chr8:85840202-85840221 None:intergenic 40.0%
ATAAATATGACCTGCTTGGG+CGG - Chr8:85841077-85841096 None:intergenic 40.0%
ATACCGCTAAAAGAGACCTT+AGG - Chr8:85839712-85839731 None:intergenic 40.0%
ATCACAGGAGTCTGTGTAAT+AGG - Chr8:85840130-85840149 None:intergenic 40.0%
ATCTTTGGCCTCGTTCTTAT+GGG + Chr8:85840806-85840825 MsG0880047407.01.T01:CDS 40.0%
ATGAAGTAGATCCACCTTCA+AGG + Chr8:85842095-85842114 MsG0880047407.01.T01:CDS 40.0%
ATGTACATGGCAGTCTGTTA+TGG + Chr8:85841530-85841549 MsG0880047407.01.T01:intron 40.0%
ATGTGGAAGAACTTGAGTTC+AGG + Chr8:85840226-85840245 MsG0880047407.01.T01:intron 40.0%
ATTGCAGAAAACGGAGAGAT+GGG + Chr8:85842046-85842065 MsG0880047407.01.T01:intron 40.0%
ATTTCTAACAAAAACGCCCG+TGG - Chr8:85838812-85838831 None:intergenic 40.0%
CAACATTTGATGGAAGGGAA+GGG - Chr8:85840530-85840549 None:intergenic 40.0%
CAAGGGGAAACAAGTACTAT+GGG + Chr8:85840965-85840984 MsG0880047407.01.T01:intron 40.0%
CAAGTTCTCCTGGATATCTT+AGG - Chr8:85838734-85838753 None:intergenic 40.0%
CACTGAGAGTTGTTCCAAAA+TGG + Chr8:85839137-85839156 MsG0880047407.01.T01:CDS 40.0%
CAGACCCTTAAATATGGTAC+TGG + Chr8:85838855-85838874 MsG0880047407.01.T01:intron 40.0%
CAGTCTAACCTACCAACATT+TGG - Chr8:85841602-85841621 None:intergenic 40.0%
CATCCTTCACAAATTGGTCA+TGG + Chr8:85839424-85839443 MsG0880047407.01.T01:intron 40.0%
CATGACCAATTTGTGAAGGA+TGG - Chr8:85839426-85839445 None:intergenic 40.0%
CATGACTTAAATCAAGACCG+CGG - Chr8:85838589-85838608 None:intergenic 40.0%
CATGCATAAGTAGAAGGAGT+TGG - Chr8:85838414-85838433 None:intergenic 40.0%
CGACATAAATATGACCTGCT+TGG - Chr8:85841081-85841100 None:intergenic 40.0%
CTTCCCTTCCATCAAATGTT+GGG + Chr8:85840529-85840548 MsG0880047407.01.T01:intron 40.0%
CTTTCAGACACTCCAAATGT+TGG + Chr8:85841587-85841606 MsG0880047407.01.T01:intron 40.0%
GAATATTGGGAAGGAAGAAC+GGG - Chr8:85840281-85840300 None:intergenic 40.0%
GATAGACCAGAAGCTTCATT+GGG + Chr8:85838959-85838978 MsG0880047407.01.T01:CDS 40.0%
GCAAGCCAGTACCATATTTA+AGG - Chr8:85838863-85838882 None:intergenic 40.0%
GGAATATTGGGAAGGAAGAA+CGG - Chr8:85840282-85840301 None:intergenic 40.0%
GGATGGAATAGTAAGTCATC+TGG + Chr8:85839177-85839196 MsG0880047407.01.T01:CDS 40.0%
GGTCCTCGTGTTTCAAATAA+TGG - Chr8:85840066-85840085 None:intergenic 40.0%
GTTGTTCCAAAATGGCTATC+AGG + Chr8:85839145-85839164 MsG0880047407.01.T01:CDS 40.0%
TACACGCAGTATCAACTTTC+CGG + Chr8:85838104-85838123 MsG0880047407.01.T01:CDS 40.0%
TACATTCCCAATGAAGCTTC+TGG - Chr8:85838968-85838987 None:intergenic 40.0%
TACTCCGGATGATCAACAAA+AGG - Chr8:85842175-85842194 None:intergenic 40.0%
TAGTTAGGCATATCAGATGG+GGG + Chr8:85841215-85841234 MsG0880047407.01.T01:intron 40.0%
TATTGCAGAAAACGGAGAGA+TGG + Chr8:85842045-85842064 MsG0880047407.01.T01:intron 40.0%
TCAAGGGGAAACAAGTACTA+TGG + Chr8:85840964-85840983 MsG0880047407.01.T01:intron 40.0%
TCATTCATTGTCCTACCAAG+AGG + Chr8:85838527-85838546 MsG0880047407.01.T01:CDS 40.0%
TCCTCACATGCATAAGTAGA+AGG - Chr8:85838420-85838439 None:intergenic 40.0%
TCCTTCTACTTATGCATGTG+AGG + Chr8:85838416-85838435 MsG0880047407.01.T01:CDS 40.0%
TGAACATGTCTAGTACATCC+AGG + Chr8:85839839-85839858 MsG0880047407.01.T01:intron 40.0%
TGAAGTAGATCCACCTTCAA+GGG + Chr8:85842096-85842115 MsG0880047407.01.T01:CDS 40.0%
TGAATGATGTGGAGCAATGA+TGG - Chr8:85838514-85838533 None:intergenic 40.0%
TGATAGACCAGAAGCTTCAT+TGG + Chr8:85838958-85838977 MsG0880047407.01.T01:CDS 40.0%
TGGTAGGACAATGAATGATG+TGG - Chr8:85838525-85838544 None:intergenic 40.0%
TGTACATGGCAGTCTGTTAT+GGG + Chr8:85841531-85841550 MsG0880047407.01.T01:intron 40.0%
TTAAACCCAACATCACCAAC+AGG - Chr8:85840255-85840274 None:intergenic 40.0%
TTCCCTTCCATCAAATGTTG+GGG + Chr8:85840530-85840549 MsG0880047407.01.T01:intron 40.0%
TTCTTCCACATGAGGAGATT+TGG - Chr8:85840217-85840236 None:intergenic 40.0%
TTGTTAGAAACTGGAAACGG+AGG - Chr8:85838166-85838185 None:intergenic 40.0%
! AAAAAAAAGGCACGGACCAA+TGG - Chr8:85838195-85838214 None:intergenic 40.0%
! CAACATTTGGAGTGTCTGAA+AGG - Chr8:85841589-85841608 None:intergenic 40.0%
! GCTCCATTATTTGAAACACG+AGG + Chr8:85840060-85840079 MsG0880047407.01.T01:intron 40.0%
! GTGTTTCAAATAATGGAGCC+TGG - Chr8:85840059-85840078 None:intergenic 40.0%
! GTTTCAAATAATGGAGCCTG+GGG - Chr8:85840057-85840076 None:intergenic 40.0%
! GTTTTATGCGATTTACACGG+CGG - Chr8:85839391-85839410 None:intergenic 40.0%
! TGGTTTCCTGATAGCCATTT+TGG - Chr8:85839154-85839173 None:intergenic 40.0%
! TTGCCTAAGGTCTCTTTTAG+CGG + Chr8:85839706-85839725 MsG0880047407.01.T01:intron 40.0%
!! GTGAGGGTTATCTTTGGTTT+TGG - Chr8:85839902-85839921 None:intergenic 40.0%
!! GTTGTTTTCACAAGTTCTCC+TGG - Chr8:85838744-85838763 None:intergenic 40.0%
!!! GGTTTTTTAGGGGGTATTCA+AGG - Chr8:85839998-85840017 None:intergenic 40.0%
AAAGCAGCTTCTTTGTTGGC+TGG - Chr8:85841023-85841042 None:intergenic 45.0%
AAGTCATCTGGTCAACTCAC+TGG + Chr8:85839189-85839208 MsG0880047407.01.T01:intron 45.0%
AATGGCTATCAGGAAACCAG+AGG + Chr8:85839155-85839174 MsG0880047407.01.T01:CDS 45.0%
AATTTCTCCTCCCTTGAAGG+TGG - Chr8:85842109-85842128 None:intergenic 45.0%
ACACACACTTACACAGAGAG+AGG + Chr8:85839756-85839775 MsG0880047407.01.T01:intron 45.0%
ACGTCTCTCAAACATTCCAC+GGG + Chr8:85838793-85838812 MsG0880047407.01.T01:intron 45.0%
AGAAGCTATCATGGCTGTGA+AGG - Chr8:85840445-85840464 None:intergenic 45.0%
AGCCAACAAAGAAGCTGCTT+TGG + Chr8:85841022-85841041 MsG0880047407.01.T01:intron 45.0%
AGGGAAGGGAGAATTATTGG+TGG - Chr8:85840516-85840535 None:intergenic 45.0%
AGGTTAGAGGAGATATTGCG+AGG + Chr8:85841501-85841520 MsG0880047407.01.T01:intron 45.0%
ATAAAGGGAGCAACCAGACA+CGG - Chr8:85840388-85840407 None:intergenic 45.0%
ATGGCTATCAGGAAACCAGA+GGG + Chr8:85839156-85839175 MsG0880047407.01.T01:CDS 45.0%
CACACACTTACACAGAGAGA+GGG + Chr8:85839757-85839776 MsG0880047407.01.T01:intron 45.0%
CAGACACTCCAAATGTTGGT+AGG + Chr8:85841591-85841610 MsG0880047407.01.T01:intron 45.0%
CATCTTTGGCCTCGTTCTTA+TGG + Chr8:85840805-85840824 MsG0880047407.01.T01:CDS 45.0%
CCAACATTTGATGGAAGGGA+AGG - Chr8:85840531-85840550 None:intergenic 45.0%
CCACATGAGGAGATTTGGAA+GGG - Chr8:85840212-85840231 None:intergenic 45.0%
CCTGCTGACGTTAATGGTAA+GGG + Chr8:85840871-85840890 MsG0880047407.01.T01:intron 45.0%
CCTTACCATTAACGTCAGCA+GGG - Chr8:85840873-85840892 None:intergenic 45.0%
CCTTCACAAATTGGTCATGG+CGG + Chr8:85839427-85839446 MsG0880047407.01.T01:intron 45.0%
CCTTCCCTTCCATCAAATGT+TGG + Chr8:85840528-85840547 MsG0880047407.01.T01:intron 45.0%
CTCAATTTCTCCTCCCTTGA+AGG - Chr8:85842112-85842131 None:intergenic 45.0%
CTGCTGACGTTAATGGTAAG+GGG + Chr8:85840872-85840891 MsG0880047407.01.T01:intron 45.0%
CTTGAGTTCAGGTATCCTGT+TGG + Chr8:85840237-85840256 MsG0880047407.01.T01:intron 45.0%
CTTTGAACAGTTTGTAGCCG+TGG + Chr8:85840022-85840041 MsG0880047407.01.T01:intron 45.0%
GAAACGACCCCAACATTTGA+TGG - Chr8:85840540-85840559 None:intergenic 45.0%
GAAACTGGAAACGGAGGATT+AGG - Chr8:85838160-85838179 None:intergenic 45.0%
GACCAATTTGTGAAGGATGG+CGG - Chr8:85839423-85839442 None:intergenic 45.0%
GACCCCAACATTTGATGGAA+GGG - Chr8:85840535-85840554 None:intergenic 45.0%
GACTTACTATTCCATCCCTC+TGG - Chr8:85839174-85839193 None:intergenic 45.0%
GAGGAAAGGAAAATTGGCGA+CGG - Chr8:85840725-85840744 None:intergenic 45.0%
GATTCTACTGATATCTGGCC+TGG + Chr8:85841162-85841181 MsG0880047407.01.T01:intron 45.0%
GCAATATCTCCTCTAACCTG+AGG - Chr8:85841500-85841519 None:intergenic 45.0%
GGAAGGGAAGGGAGAATTAT+TGG - Chr8:85840519-85840538 None:intergenic 45.0%
GGACTGAAAAGGACTTTCCA+AGG - Chr8:85840191-85840210 None:intergenic 45.0%
GGGACTCAATGGAACAAATG+TGG + Chr8:85838289-85838308 MsG0880047407.01.T01:intron 45.0%
GGTTAGAGGAGATATTGCGA+GGG + Chr8:85841502-85841521 MsG0880047407.01.T01:intron 45.0%
GTACTATGGGGATGCATAAC+TGG + Chr8:85840978-85840997 MsG0880047407.01.T01:intron 45.0%
GTCCAAAGCAGCTTCTTTGT+TGG - Chr8:85841027-85841046 None:intergenic 45.0%
GTGGCGGTTTGAAAAAACTG+CGG - Chr8:85838044-85838063 None:intergenic 45.0%
TCAAATGTTGGGGTCGTTTC+AGG + Chr8:85840540-85840559 MsG0880047407.01.T01:intron 45.0%
TCCACATGAGGAGATTTGGA+AGG - Chr8:85840213-85840232 None:intergenic 45.0%
TGCTGACGTTAATGGTAAGG+GGG + Chr8:85840873-85840892 MsG0880047407.01.T01:intron 45.0%
TGGCGGTTTGAAAAAACTGC+GGG - Chr8:85838043-85838062 None:intergenic 45.0%
TGGTTGCTCCCTTTATACCA+AGG + Chr8:85840392-85840411 MsG0880047407.01.T01:intron 45.0%
TGTTATGGGTTTCCACAACC+AGG + Chr8:85841545-85841564 MsG0880047407.01.T01:intron 45.0%
TTCAAACCGCCACTACTTGT+CGG + Chr8:85838051-85838070 MsG0880047407.01.T01:CDS 45.0%
TTGAGATCAAGATGGGGACT+TGG - Chr8:85840303-85840322 None:intergenic 45.0%
TTTGACCACCTCCTTCTCAA+AGG + Chr8:85840358-85840377 MsG0880047407.01.T01:intron 45.0%
! AGTGGTGGCCTTGGTATAAA+GGG - Chr8:85840403-85840422 None:intergenic 45.0%
!! AGGTATCCTGTTGGTGATGT+TGG + Chr8:85840246-85840265 MsG0880047407.01.T01:intron 45.0%
!! ATCTTACAGGGGAGCATCTT+TGG + Chr8:85840791-85840810 MsG0880047407.01.T01:intron 45.0%
!! CGATTTACACGGCGGATTTT+TGG - Chr8:85839383-85839402 None:intergenic 45.0%
!! GCGACGGTTAACTTTGGTTT+TGG - Chr8:85840709-85840728 None:intergenic 45.0%
!! GGTATCCTGTTGGTGATGTT+GGG + Chr8:85840247-85840266 MsG0880047407.01.T01:intron 45.0%
!! GTTGGCTGGTCTAAGACATT+TGG - Chr8:85841009-85841028 None:intergenic 45.0%
!! TGCGAGGGCATTAATGTACA+TGG + Chr8:85841517-85841536 MsG0880047407.01.T01:intron 45.0%
!! TATTATAAAAAAATATATCA+GGG - Chr8:85841773-85841792 None:intergenic 5.0%
ACACTGAAGCAGACAAGAGG+AGG + Chr8:85841045-85841064 MsG0880047407.01.T01:intron 50.0%
ACAGGTGTGGGATGCTCTTA+AGG + Chr8:85838916-85838935 MsG0880047407.01.T01:intron 50.0%
AGGTCGTCAAATATCGGCCA+TGG - Chr8:85839481-85839500 None:intergenic 50.0%
AGTAGATCCACCTTCAAGGG+AGG + Chr8:85842099-85842118 MsG0880047407.01.T01:CDS 50.0%
ATATCGGCCATGGCAGATTG+TGG - Chr8:85839471-85839490 None:intergenic 50.0%
ATTCGCCCTGCTGACGTTAA+TGG + Chr8:85840865-85840884 MsG0880047407.01.T01:CDS 50.0%
CACCGCCATCCTTCACAAAT+TGG + Chr8:85839418-85839437 MsG0880047407.01.T01:intron 50.0%
CACGAGGACCATGATGTTGA+TGG + Chr8:85840076-85840095 MsG0880047407.01.T01:intron 50.0%
CATGATAGCTTCTCCTCCTC+GGG + Chr8:85840452-85840471 MsG0880047407.01.T01:intron 50.0%
CCATGATAGCTTCTCCTCCT+CGG + Chr8:85840451-85840470 MsG0880047407.01.T01:intron 50.0%
CCCTGCTGACGTTAATGGTA+AGG + Chr8:85840870-85840889 MsG0880047407.01.T01:intron 50.0%
CCCTTACCATTAACGTCAGC+AGG - Chr8:85840874-85840893 None:intergenic 50.0%
CCCTTCCAAATCTCCTCATG+TGG + Chr8:85840209-85840228 MsG0880047407.01.T01:intron 50.0%
CCGCCATGACCAATTTGTGA+AGG - Chr8:85839430-85839449 None:intergenic 50.0%
CGACCCCAACATTTGATGGA+AGG - Chr8:85840536-85840555 None:intergenic 50.0%
CTATCAGGAAACCAGAGGGA+TGG + Chr8:85839160-85839179 MsG0880047407.01.T01:CDS 50.0%
CTGGAAACGGAGGATTAGGA+CGG - Chr8:85838156-85838175 None:intergenic 50.0%
GAACTGTTCCCGACAAGTAG+TGG - Chr8:85838063-85838082 None:intergenic 50.0%
GGCGGTTTGAAAAAACTGCG+GGG - Chr8:85838042-85838061 None:intergenic 50.0%
GGCTTGCGTTTGCTTTGCTA+AGG + Chr8:85838876-85838895 MsG0880047407.01.T01:intron 50.0%
GGGGACTTGGAATATTGGGA+AGG - Chr8:85840290-85840309 None:intergenic 50.0%
GTTGTCAGCCCATAAGAACG+AGG - Chr8:85840817-85840836 None:intergenic 50.0%
TAGGCATATCAGATGGGGGT+TGG + Chr8:85841219-85841238 MsG0880047407.01.T01:intron 50.0%
TATGGGTTTCCACAACCAGG+AGG + Chr8:85841548-85841567 MsG0880047407.01.T01:intron 50.0%
TCAAACCGCCACTACTTGTC+GGG + Chr8:85838052-85838071 MsG0880047407.01.T01:CDS 50.0%
TGAAGCAGACAAGAGGAGGT+GGG + Chr8:85841049-85841068 MsG0880047407.01.T01:intron 50.0%
TGGACACTGAAGCAGACAAG+AGG + Chr8:85841042-85841061 MsG0880047407.01.T01:intron 50.0%
TTATACCAAGGCCACCACTG+AGG + Chr8:85840404-85840423 MsG0880047407.01.T01:intron 50.0%
! CAGTGGTGGCCTTGGTATAA+AGG - Chr8:85840404-85840423 None:intergenic 50.0%
!! ATGGCTGTGAAGGCATTGCA+AGG - Chr8:85840435-85840454 None:intergenic 50.0%
!! GCCTGGGGATTTGTTTTCCA+CGG - Chr8:85840042-85840061 None:intergenic 50.0%
!! GGGGAGTATCAAGTGACTTG+TGG - Chr8:85838023-85838042 None:intergenic 50.0%
!! TGGCTGTGAAGGCATTGCAA+GGG - Chr8:85840434-85840453 None:intergenic 50.0%
ACGTCCACCACAATCTGCCA+TGG + Chr8:85839461-85839480 MsG0880047407.01.T01:intron 55.0%
ATTGCAAGGGACTGCCTCAG+TGG - Chr8:85840421-85840440 None:intergenic 55.0%
CCGAGGAGGAGAAGCTATCA+TGG - Chr8:85840454-85840473 None:intergenic 55.0%
CTGAAGCAGACAAGAGGAGG+TGG + Chr8:85841048-85841067 MsG0880047407.01.T01:intron 55.0%
CTGTTCCCGACAAGTAGTGG+CGG - Chr8:85838060-85838079 None:intergenic 55.0%
GAGGATTAGGACGGCTTGCA+CGG - Chr8:85838147-85838166 None:intergenic 55.0%
GCAGTATCAACTTTCCGGCG+CGG + Chr8:85838109-85838128 MsG0880047407.01.T01:CDS 55.0%
GCCGTGGAAAACAAATCCCC+AGG + Chr8:85840038-85840057 MsG0880047407.01.T01:intron 55.0%
GTGTCTGAAAGGCGAAGACC+TGG - Chr8:85841578-85841597 None:intergenic 55.0%
TAGAGGCCACAGAATACCCG+AGG - Chr8:85840471-85840490 None:intergenic 55.0%
TCTCCTCCTCGGGTATTCTG+TGG + Chr8:85840462-85840481 MsG0880047407.01.T01:intron 55.0%
! ACGGTGCACCTTTGAGAAGG+AGG - Chr8:85840369-85840388 None:intergenic 55.0%
! GACACGGTGCACCTTTGAGA+AGG - Chr8:85840372-85840391 None:intergenic 55.0%
! GTGCACCTTTGAGAAGGAGG+TGG - Chr8:85840366-85840385 None:intergenic 55.0%
! TCTCAAAGGTGCACCGTGTC+TGG + Chr8:85840372-85840391 MsG0880047407.01.T01:intron 55.0%
AGGCCACAGAATACCCGAGG+AGG - Chr8:85840468-85840487 None:intergenic 60.0%
CCACAACCAGGAGGAAGTCC+AGG + Chr8:85841557-85841576 MsG0880047407.01.T01:intron 60.0%
CCTGGACTTCCTCCTGGTTG+TGG - Chr8:85841560-85841579 None:intergenic 60.0%
CGAAGACCTGGACTTCCTCC+TGG - Chr8:85841566-85841585 None:intergenic 60.0%
GTATCAACTTTCCGGCGCGG+CGG + Chr8:85838112-85838131 MsG0880047407.01.T01:CDS 60.0%
TCGGCCATGGCAGATTGTGG+TGG - Chr8:85839468-85839487 None:intergenic 60.0%
GACTGCCTCAGTGGTGGCCT+TGG - Chr8:85840412-85840431 None:intergenic 65.0%
GCAAGGGACTGCCTCAGTGG+TGG - Chr8:85840418-85840437 None:intergenic 65.0%
GGATAATCCAACCGCCGCGC+CGG - Chr8:85838126-85838145 None:intergenic 65.0%
CAACTTTCCGGCGCGGCGGT+TGG + Chr8:85838116-85838135 MsG0880047407.01.T01:CDS 70.0%
! GAGGTGGGCACCGCCCAAGC+AGG + Chr8:85841064-85841083 MsG0880047407.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 85838013 85842315 85838013 ID=MsG0880047407.01;Name=MsG0880047407.01
Chr8 mRNA 85838013 85842315 85838013 ID=MsG0880047407.01.T01;Parent=MsG0880047407.01;Name=MsG0880047407.01.T01;_AED=0.39;_eAED=0.41;_QI=0|0|0|1|0.66|0.71|7|0|316
Chr8 exon 85838013 85838197 85838013 ID=MsG0880047407.01.T01:exon:15558;Parent=MsG0880047407.01.T01
Chr8 exon 85838290 85838548 85838290 ID=MsG0880047407.01.T01:exon:15559;Parent=MsG0880047407.01.T01
Chr8 exon 85838920 85838984 85838920 ID=MsG0880047407.01.T01:exon:15560;Parent=MsG0880047407.01.T01
Chr8 exon 85839123 85839198 85839123 ID=MsG0880047407.01.T01:exon:15561;Parent=MsG0880047407.01.T01
Chr8 exon 85839289 85839304 85839289 ID=MsG0880047407.01.T01:exon:15562;Parent=MsG0880047407.01.T01
Chr8 exon 85840800 85840886 85840800 ID=MsG0880047407.01.T01:exon:15563;Parent=MsG0880047407.01.T01
Chr8 exon 85842053 85842315 85842053 ID=MsG0880047407.01.T01:exon:15564;Parent=MsG0880047407.01.T01
Chr8 CDS 85838013 85838197 85838013 ID=MsG0880047407.01.T01:cds;Parent=MsG0880047407.01.T01
Chr8 CDS 85838290 85838548 85838290 ID=MsG0880047407.01.T01:cds;Parent=MsG0880047407.01.T01
Chr8 CDS 85838920 85838984 85838920 ID=MsG0880047407.01.T01:cds;Parent=MsG0880047407.01.T01
Chr8 CDS 85839123 85839198 85839123 ID=MsG0880047407.01.T01:cds;Parent=MsG0880047407.01.T01
Chr8 CDS 85839289 85839304 85839289 ID=MsG0880047407.01.T01:cds;Parent=MsG0880047407.01.T01
Chr8 CDS 85840800 85840886 85840800 ID=MsG0880047407.01.T01:cds;Parent=MsG0880047407.01.T01
Chr8 CDS 85842053 85842315 85842053 ID=MsG0880047407.01.T01:cds;Parent=MsG0880047407.01.T01
Gene Sequence

>MsG0880047407.01.T01

ATGACAACCACAAGTCACTTGATACTCCCCGCAGTTTTTTCAAACCGCCACTACTTGTCGGGAACAGTTCAACTTCACAATCAAAATCTCATACACGCAGTATCAACTTTCCGGCGCGGCGGTTGGATTATCCGTGCAAGCCGTCCTAATCCTCCGTTTCCAGTTTCTAACAACATTCACCATTGGGACTCAATGGAACAAATGTGGCTAACTTGTTTTCATTTCTCATGGAAATGCTTGTTTTCTAGACTTGTTTCTTTTTACTTGTTATTATCTCTTAATCTTGTTGCTGTTGCCTCTGAATATCCAACTCCTTCTACTTATGCATGTGAGGATGTTGCCAATTACTATTCCCCTTTGAAGCATTTCAGACTAAAAGGTGAAAAACTCAAGAGAAAATTGAATTCCATCATTGCTCCACATCATTCATTGTCCTACCAAGAGGTGTGGGATGCTCTTAAGGTTCTTGATGCTGCTGATATTGATAGACCAGAAGCTTCATTGGGAATAGTCGAAATATACTCACTGAGAGTTGTTCCAAAATGGCTATCAGGAAACCAGAGGGATGGAATAGTAAGTCATCTGCATACTTTCTCAGTCGGGGAGCATCTTTGGCCTCGTTCTTATGGGCTGACAACTGTTCCATCTTTGACTGATTTGCACAACATTCGCCCTGCTGACGTTAATGAAAACGGAGAGATGGGACTGCTTTCCACATTATTAGAATGGAATGAAGTAGATCCACCTTCAAGGGAGGAGAAATTGAGAAACGAGAGAATATGTAAATTTTATCAGCATAATCGGAATCCTTTTGTTGATCATCCGGAGTATGTGAATCTTATATGGAAGCGACTTGTTTCAATGCGTGCTCATAATAATAACGATGATGATAAGAATGTCTCCAACGAAGAAAAAAAATTAGGACGTGGGGCTCAATTGCTTCACTTATGA

Protein sequence

>MsG0880047407.01.T01

MTTTSHLILPAVFSNRHYLSGTVQLHNQNLIHAVSTFRRGGWIIRASRPNPPFPVSNNIHHWDSMEQMWLTCFHFSWKCLFSRLVSFYLLLSLNLVAVASEYPTPSTYACEDVANYYSPLKHFRLKGEKLKRKLNSIIAPHHSLSYQEVWDALKVLDAADIDRPEASLGIVEIYSLRVVPKWLSGNQRDGIVSHLHTFSVGEHLWPRSYGLTTVPSLTDLHNIRPADVNENGEMGLLSTLLEWNEVDPPSREEKLRNERICKFYQHNRNPFVDHPEYVNLIWKRLVSMRAHNNNDDDKNVSNEEKKLGRGAQLLHL*