AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003155.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003155.01.T01 MTR_1g054965 84.255 235 35 1 1 235 1 233 1.62e-139 410
MsG0180003155.01.T01 MTR_1g054965 98.734 79 1 0 280 358 422 500 1.48e-43 160
MsG0180003155.01.T01 MTR_1g054965 84.255 235 35 1 1 235 1 233 2.60e-138 410
MsG0180003155.01.T01 MTR_1g054965 99.371 159 1 0 280 438 422 580 5.21e-107 329
MsG0180003155.01.T01 MTR_1g054965 99.429 175 1 0 280 454 266 440 2.01e-121 361
MsG0180003155.01.T01 MTR_1g054965 91.429 70 6 0 209 278 114 183 8.97e-34 132
MsG0180003155.01.T01 MTR_1g054965 70.886 79 21 1 157 235 1 77 1.35e-30 123
MsG0180003155.01.T01 MTR_1g054965 98.734 79 1 0 280 358 224 302 1.48e-45 161
MsG0180003155.01.T01 MTR_1g054965 91.429 70 6 0 209 278 72 141 4.29e-35 133
MsG0180003155.01.T01 MTR_4g134780 37.267 161 90 5 287 442 423 577 9.90e-23 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003155.01.T01 AT1G06820 44.253 522 130 17 69 438 67 579 8.19e-104 321
MsG0180003155.01.T01 AT1G06820 43.454 527 135 18 69 443 67 582 9.63e-101 313
MsG0180003155.01.T01 AT1G06820 85.714 161 23 0 278 438 300 460 7.69e-92 286
MsG0180003155.01.T01 AT1G06820 63.918 97 33 1 139 235 19 113 5.06e-34 133
MsG0180003155.01.T01 AT1G06820 72.619 168 43 2 69 235 67 232 1.68e-75 245
MsG0180003155.01.T01 AT1G06820 80.247 81 16 0 278 358 419 499 1.19e-32 130
MsG0180003155.01.T01 AT1G57770 38.037 163 90 5 287 444 418 574 2.05e-21 97.4

Find 134 sgRNAs with CRISPR-Local

Find 450 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATACCTGGTGGGAGTTC+TGG 0.127565 1:-57531545 MsG0180003155.01.T01:CDS
GGGATTGGTGGGTTGGTTGC+TGG 0.141035 1:-57531617 MsG0180003155.01.T01:CDS
AGCTGCATAGAATCCGATTT+TGG 0.213653 1:-57525869 MsG0180003155.01.T01:three_prime_UTR
AATTGAGCATGGTTGGTTAA+TGG 0.268735 1:+57531888 None:intergenic
GGGTTTGATGCAATTGTTAT+TGG 0.272864 1:-57531644 MsG0180003155.01.T01:CDS
TGGGTCTGGGATTGGTGGGT+TGG 0.303657 1:-57531624 MsG0180003155.01.T01:CDS
GTGGGATTAACTACCCTCTT+GGG 0.310382 1:-57528269 MsG0180003155.01.T01:CDS
TATATTCACAACTTCTTCAA+TGG 0.321714 1:-57527512 MsG0180003155.01.T01:CDS
TTATACCTGGTGGGAGTTCT+GGG 0.324237 1:-57531544 MsG0180003155.01.T01:CDS
GGTTAGAAACGGAGAGTATA+AGG 0.324411 1:+57531864 None:intergenic
TCTTGGTACAACTCTTTGTT+TGG 0.324571 1:+57525787 None:intergenic
GGATTGGTGGGTTGGTTGCT+GGG 0.332135 1:-57531616 MsG0180003155.01.T01:CDS
GATGCAATTGTTATTGGGTC+TGG 0.348955 1:-57531638 MsG0180003155.01.T01:CDS
GCCCGTGACGAGGGTACTTA+TGG 0.350068 1:-57526898 MsG0180003155.01.T01:CDS
GGTTTGATGCAATTGTTATT+GGG 0.352695 1:-57531643 MsG0180003155.01.T01:CDS
GGCATGCTGCTTGGGTTGCT+TGG 0.354118 1:-57526180 MsG0180003155.01.T01:CDS
TGTGAAAGGTGCTAGAGTTT+TGG 0.359350 1:-57531582 MsG0180003155.01.T01:CDS
TTGTTTGGATAAAAGAAAAC+TGG 0.361173 1:+57525802 None:intergenic
TGCTGCTTGGGTTGCTTGGT+TGG 0.365552 1:-57526176 MsG0180003155.01.T01:CDS
CATCGAGTAGCTGCAGATAT+TGG 0.371399 1:-57526624 MsG0180003155.01.T01:intron
GGCAAAAGGTCTAGTTGATC+AGG 0.375101 1:-57528220 MsG0180003155.01.T01:CDS
GGGTGTGATGGTAGATGATG+GGG 0.379033 1:+57531837 None:intergenic
GTTATTGCTGTAGCTTTCTC+AGG 0.379480 1:-57526660 MsG0180003155.01.T01:CDS
GTTGGTTCTTCTGTTATGTT+TGG 0.379751 1:-57531491 MsG0180003155.01.T01:CDS
AAGTATCGTCGATGTGTCTT+AGG 0.386513 1:+57526922 None:intergenic
AGCATTCCAAAGGGGTTGTT+AGG 0.391726 1:-57526862 MsG0180003155.01.T01:CDS
ATTGTTATTGGGTCTGGGAT+TGG 0.392967 1:-57531632 MsG0180003155.01.T01:CDS
GGTAAAGATTGAAACTTTGT+AGG 0.393664 1:+57531812 None:intergenic
TTAGAGAAGAAATTGTTTCC+AGG 0.395116 1:-57527245 MsG0180003155.01.T01:CDS
AGCATTCACCATAAAATTTG+AGG 0.398663 1:+57530099 None:intergenic
TGAAGGATATGACGACCTTC+AGG 0.399654 1:+57527535 None:intergenic
TTATTGGGTCTGGGATTGGT+GGG 0.401354 1:-57531628 MsG0180003155.01.T01:CDS
AAACTTACGGTTGTGTTAAA+CGG 0.405692 1:+57526835 None:intergenic
GTTGGAGACAGTTGCTTCCC+TGG 0.408956 1:-57526690 MsG0180003155.01.T01:CDS
ATGCAATTGTTATTGGGTCT+GGG 0.415335 1:-57531637 MsG0180003155.01.T01:CDS
GGCATTCCTAACAACCCCTT+TGG 0.415481 1:+57526856 None:intergenic
TTTGGAATGCTGCGTGGCAT+TGG 0.424414 1:+57526874 None:intergenic
TGGTGGATAGTGGGAAGAGA+AGG 0.426899 1:-57531679 MsG0180003155.01.T01:CDS
AGCAGCATGCCGTCCAAAAC+AGG 0.432079 1:+57526192 None:intergenic
GTTATTGGGTCTGGGATTGG+TGG 0.434710 1:-57531629 MsG0180003155.01.T01:CDS
TAATGCCATGAAAATGATAA+TGG 0.437425 1:+57531955 None:intergenic
ACTTGCTTTCAGAGCATAGA+TGG 0.443465 1:-57526723 MsG0180003155.01.T01:intron
GGGGTGTGATGGTAGATGAT+GGG 0.445186 1:+57531836 None:intergenic
GGTGGGATTAACTACCCTCT+TGG 0.447475 1:-57528270 MsG0180003155.01.T01:CDS
TTCTTCAATGGACGATTGGC+AGG 0.456294 1:-57527500 MsG0180003155.01.T01:intron
ACCAGTTTGGAGGAACCATA+TGG 0.456800 1:-57527604 MsG0180003155.01.T01:intron
GCTTAGCTGCGTGCCAATGC+GGG 0.457813 1:-57525899 MsG0180003155.01.T01:three_prime_UTR
AGTGAAAGGGATGGTGAAGT+TGG 0.461843 1:-57531711 MsG0180003155.01.T01:CDS
AAATGAACAGTTGTCGGATC+AGG 0.464086 1:+57530218 None:intergenic
TGGAGTCTGCAAAGCGTTGA+CGG 0.473220 1:+57528847 None:intergenic
AAGATTGAAACTTTGTAGGT+GGG 0.478712 1:+57531816 None:intergenic
ACCATGCTAGCATTAATCAT+TGG 0.478809 1:+57528827 None:intergenic
TGGGATTAACTACCCTCTTG+GGG 0.481634 1:-57528268 MsG0180003155.01.T01:CDS
ATTTACACAGTTATAGAACT+AGG 0.485783 1:-57526021 MsG0180003155.01.T01:three_prime_UTR
CAACTTGATAACACAAGCAT+TGG 0.487277 1:-57530270 MsG0180003155.01.T01:CDS
TGGGGTGTGATGGTAGATGA+TGG 0.491055 1:+57531835 None:intergenic
GCATGGTTGGTTAATGGAAG+TGG 0.492990 1:+57531894 None:intergenic
CAACTTCTTCAATGGACGAT+TGG 0.495431 1:-57527504 MsG0180003155.01.T01:CDS
GGGACTCAGTTGGCTGTGAA+AGG 0.502136 1:-57531596 MsG0180003155.01.T01:CDS
AGTTACAGAAAGGAATATCT+TGG 0.502589 1:+57525770 None:intergenic
TCTTTACCTTCATGTAGCTA+TGG 0.503305 1:-57531797 MsG0180003155.01.T01:CDS
TCGCAATTTGATGCACAAGA+TGG 0.505044 1:-57525921 MsG0180003155.01.T01:three_prime_UTR
ATTGCAAAGTCCTTGGCAAA+AGG 0.507882 1:-57528234 MsG0180003155.01.T01:CDS
AAAGATTGAAACTTTGTAGG+TGG 0.509708 1:+57531815 None:intergenic
CGAATATGAGGCAAAGAAGC+AGG 0.510443 1:-57527294 MsG0180003155.01.T01:CDS
GGTGGATAGTGGGAAGAGAA+GGG 0.511612 1:-57531678 MsG0180003155.01.T01:CDS
AAGAGAAGGGATTTAAGTGA+AGG 0.512251 1:-57531665 MsG0180003155.01.T01:CDS
GTTAGAAACGGAGAGTATAA+GGG 0.515019 1:+57531865 None:intergenic
ATAAGGGAATTGAGCATGGT+TGG 0.515630 1:+57531881 None:intergenic
AAGGTGACGGTGAAAGTGAA+AGG 0.516101 1:-57531725 MsG0180003155.01.T01:CDS
GTTGGTTGCTGGGACTCAGT+TGG 0.518251 1:-57531606 MsG0180003155.01.T01:CDS
AGATGAAAATGAACAGTTGT+CGG 0.518578 1:+57530212 None:intergenic
TCACGAGTATATCACCGAGC+AGG 0.520075 1:-57528170 MsG0180003155.01.T01:CDS
TTCTACCTCTATAAAATCGA+TGG 0.521134 1:+57527211 None:intergenic
ACTCGAACAGAGAGGTGGTT+TGG 0.522462 1:+57530188 None:intergenic
GAACAATTGGACCAGTTTGG+AGG 0.525975 1:-57527614 MsG0180003155.01.T01:intron
ACTTTGTAGGTGGGGTGTGA+TGG 0.526748 1:+57531825 None:intergenic
GAAAGGGATGGTGAAGTTGG+AGG 0.529091 1:-57531708 MsG0180003155.01.T01:CDS
ATGCCACGCAGCATTCCAAA+GGG 0.532817 1:-57526871 MsG0180003155.01.T01:CDS
ATAGATGGTCTTTACTGTGT+TGG 0.534434 1:-57526708 MsG0180003155.01.T01:CDS
ACTTACGGCTTTGCCCTGCT+CGG 0.535017 1:+57528156 None:intergenic
GACAGTTGCTTCCCTGGACA+AGG 0.535454 1:-57526684 MsG0180003155.01.T01:CDS
TGTGTGACAGACACTTTGGT+GGG 0.539652 1:-57528287 MsG0180003155.01.T01:CDS
AGAGAAGGGATTTAAGTGAA+GGG 0.540614 1:-57531664 MsG0180003155.01.T01:CDS
AAGAAGTTGTGAATATATGA+AGG 0.541078 1:+57527518 None:intergenic
ACAGCAATAACACCTTGTCC+AGG 0.542134 1:+57526672 None:intergenic
GTCCATAAGTACCCTCGTCA+CGG 0.543450 1:+57526896 None:intergenic
GCTTGGTTGGTTAAGAACAT+TGG 0.543596 1:-57526163 MsG0180003155.01.T01:CDS
TTGGAGAAGTATGTTATACC+TGG 0.544910 1:-57531557 MsG0180003155.01.T01:CDS
TCGATGGATGATCTAAGACC+TGG 0.552826 1:+57527227 None:intergenic
GGCTTAGCTGCGTGCCAATG+CGG 0.553372 1:-57525900 MsG0180003155.01.T01:three_prime_UTR
AGGTGACGGTGAAAGTGAAA+GGG 0.554994 1:-57531724 MsG0180003155.01.T01:CDS
TCCAATGATTAATGCTAGCA+TGG 0.556512 1:-57528828 MsG0180003155.01.T01:intron
AGATTGAAACTTTGTAGGTG+GGG 0.558184 1:+57531817 None:intergenic
TATGTTTGGTTTCAGTGACA+AGG 0.559412 1:-57531477 MsG0180003155.01.T01:intron
TCTCTCAAGAATCGAATATG+AGG 0.561899 1:-57527306 MsG0180003155.01.T01:CDS
ACACAAGCATTGGAAGCAGT+TGG 0.564007 1:-57530260 MsG0180003155.01.T01:CDS
GGAAGCAGTTGGTTGTCAGA+TGG 0.564032 1:-57530249 MsG0180003155.01.T01:CDS
TTTACACAGTTATAGAACTA+GGG 0.564228 1:-57526020 MsG0180003155.01.T01:three_prime_UTR
TAAAATGCATAGTTACAGAA+AGG 0.565180 1:+57525760 None:intergenic
ATAGAACTAGGGCGTTCGAT+CGG 0.570562 1:-57526009 MsG0180003155.01.T01:three_prime_UTR
TGGTGGGATTGCAAAGTCCT+TGG 0.575419 1:-57528241 MsG0180003155.01.T01:CDS
AACTATAAATAATGTTACAC+AGG 0.578612 1:+57526095 None:intergenic
TCCATAAGTACCCTCGTCAC+GGG 0.581708 1:+57526897 None:intergenic
GTTCTGTGTGACAGACACTT+TGG 0.585250 1:-57528291 MsG0180003155.01.T01:CDS
CACGAGTATATCACCGAGCA+GGG 0.586689 1:-57528169 MsG0180003155.01.T01:CDS
AATGATGAATCAAGTATAGT+CGG 0.590388 1:+57527562 None:intergenic
AATGCCACGCAGCATTCCAA+AGG 0.592149 1:-57526872 MsG0180003155.01.T01:CDS
GATTCATCATTAGCTCCTGA+AGG 0.593456 1:-57527550 MsG0180003155.01.T01:CDS
CTGTGTGACAGACACTTTGG+TGG 0.593994 1:-57528288 MsG0180003155.01.T01:CDS
CATGACCCAGATGAAAATTG+AGG 0.599036 1:+57531770 None:intergenic
GGTCTTCCATAGCTACATGA+AGG 0.607346 1:+57531791 None:intergenic
TCTTGTGCATCAAATTGCGA+TGG 0.607687 1:+57525924 None:intergenic
GGTGTGATGGTAGATGATGG+GGG 0.615243 1:+57531838 None:intergenic
GGGATTAACTACCCTCTTGG+GGG 0.619406 1:-57528267 MsG0180003155.01.T01:CDS
AGCAGTTGGTTGTCAGATGG+AGG 0.621877 1:-57530246 MsG0180003155.01.T01:CDS
AGAAGTATGTTATACCTGGT+GGG 0.622034 1:-57531553 MsG0180003155.01.T01:CDS
GGGTAGTCAGATACTTTACA+AGG 0.622656 1:-57528199 MsG0180003155.01.T01:CDS
GCAAAAGGTCTAGTTGATCA+GGG 0.623548 1:-57528219 MsG0180003155.01.T01:CDS
GAGAAGTATGTTATACCTGG+TGG 0.625923 1:-57531554 MsG0180003155.01.T01:CDS
TCTATAACTGTGTAAATGCG+AGG 0.632971 1:+57526027 None:intergenic
CAGCAATAACACCTTGTCCA+GGG 0.633374 1:+57526673 None:intergenic
TAAAACCCAGAACTCCCACC+AGG 0.637843 1:+57531539 None:intergenic
GAGTATAAGGGAATTGAGCA+TGG 0.637900 1:+57531877 None:intergenic
TTGTTGGGGAGGGAGGAGAG+CGG 0.643982 1:-57526053 MsG0180003155.01.T01:three_prime_UTR
GCAGCTATAGAATCCCGCAT+TGG 0.651693 1:+57525886 None:intergenic
ACGATACTTAGCCCGTGACG+AGG 0.654000 1:-57526908 MsG0180003155.01.T01:CDS
TGTGCACTCGAACAGAGAGG+TGG 0.665428 1:+57530183 None:intergenic
CGATACTTAGCCCGTGACGA+GGG 0.667190 1:-57526907 MsG0180003155.01.T01:CDS
GACGGTGAAAGTGAAAGGGA+TGG 0.673142 1:-57531720 MsG0180003155.01.T01:CDS
AACCCCTTTGGAATGCTGCG+TGG 0.680893 1:+57526868 None:intergenic
CTCTGTGCACTCGAACAGAG+AGG 0.688933 1:+57530180 None:intergenic
ATATGAGGCAAAGAAGCAGG+TGG 0.709650 1:-57527291 MsG0180003155.01.T01:CDS
TGCCACGCAGCATTCCAAAG+GGG 0.750458 1:-57526870 MsG0180003155.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATTAATTACAAAAG+CGG + Chr1:57527690-57527709 None:intergenic 10.0%
!!! ATTATTTTAAAGTAAACTTA+CGG + Chr1:57530891-57530910 None:intergenic 10.0%
!!! ATTGTATTTTTATTTTTTGT+TGG - Chr1:57531641-57531660 MsG0180003155.01.T01:CDS 10.0%
!!! TTGTATTTTTATTTTTTGTT+GGG - Chr1:57531642-57531661 MsG0180003155.01.T01:CDS 10.0%
!! AAAAAGATGTAACATTATTA+CGG - Chr1:57528358-57528377 MsG0180003155.01.T01:intron 15.0%
!! AAAATTAATCAAATAAGAAG+CGG + Chr1:57529391-57529410 None:intergenic 15.0%
!! ACTTATAATTCAAATAATTG+AGG - Chr1:57528000-57528019 MsG0180003155.01.T01:intron 15.0%
!! CATTTATTATGAAAATAATG+TGG + Chr1:57528727-57528746 None:intergenic 15.0%
!! CTTATAATTCAAATAATTGA+GGG - Chr1:57528001-57528020 MsG0180003155.01.T01:intron 15.0%
!! GTTTATATAAGAAATTCATA+GGG - Chr1:57526678-57526697 MsG0180003155.01.T01:CDS 15.0%
!! TAATATATTAAATGAGTGTT+TGG + Chr1:57531362-57531381 None:intergenic 15.0%
!! TAATTATTGTTTATGTTGAA+TGG - Chr1:57527357-57527376 MsG0180003155.01.T01:intron 15.0%
!! TTATAATTCAAATAATTGAG+GGG - Chr1:57528002-57528021 MsG0180003155.01.T01:intron 15.0%
!! TTATTATTAAAAAATAGGGT+TGG - Chr1:57531484-57531503 MsG0180003155.01.T01:CDS 15.0%
!!! AATGTATTTTATCTTTTTCA+TGG - Chr1:57527216-57527235 MsG0180003155.01.T01:intron 15.0%
!!! AATTATTTTTGTATTTGTCT+AGG - Chr1:57527042-57527061 MsG0180003155.01.T01:intron 15.0%
!!! AGATTTCAACTTTATTTTAT+TGG + Chr1:57530259-57530278 None:intergenic 15.0%
!!! ATCAATATTTTCATATGATT+TGG - Chr1:57528504-57528523 MsG0180003155.01.T01:intron 15.0%
!!! TGTATTTTTATTTTTTGTTG+GGG - Chr1:57531643-57531662 MsG0180003155.01.T01:CDS 15.0%
!!! TGTTTCTTTTGAAATAAAAA+AGG - Chr1:57526258-57526277 MsG0180003155.01.T01:intron 15.0%
!! AAAAATTTGCAACACATTAT+AGG - Chr1:57526591-57526610 MsG0180003155.01.T01:intron 20.0%
!! AAAAGATGTAACATTATTAC+GGG - Chr1:57528359-57528378 MsG0180003155.01.T01:intron 20.0%
!! AAAATACAGCAAAATTAATG+AGG + Chr1:57530538-57530557 None:intergenic 20.0%
!! AAAATTTGCAACACATTATA+GGG - Chr1:57526592-57526611 MsG0180003155.01.T01:intron 20.0%
!! AAAGAAATTGCTCAATTTAT+AGG - Chr1:57526654-57526673 MsG0180003155.01.T01:CDS 20.0%
!! AAATTAATCAAATAAGAAGC+GGG + Chr1:57529390-57529409 None:intergenic 20.0%
!! AACTATAAATAATGTTACAC+AGG + Chr1:57531618-57531637 None:intergenic 20.0%
!! AAGAAATTGCTCAATTTATA+GGG - Chr1:57526655-57526674 MsG0180003155.01.T01:CDS 20.0%
!! ACACATAAATAATCAAGATT+TGG + Chr1:57530715-57530734 None:intergenic 20.0%
!! ATGCAATTGAAAATTTGAAA+GGG - Chr1:57528404-57528423 MsG0180003155.01.T01:intron 20.0%
!! GGTTTATATAAGAAATTCAT+AGG - Chr1:57526677-57526696 MsG0180003155.01.T01:CDS 20.0%
!! TAAAATAATGATTCAATGAC+AGG - Chr1:57530902-57530921 MsG0180003155.01.T01:intron 20.0%
!! TATTGTGCTTATATATTAGT+AGG + Chr1:57527068-57527087 None:intergenic 20.0%
!! TTAAAAGTCTATATTTGTCA+TGG - Chr1:57527712-57527731 MsG0180003155.01.T01:intron 20.0%
!! TTTCTTAAATTACTTCTCAT+AGG + Chr1:57527179-57527198 None:intergenic 20.0%
!!! AAAAGAAAATTTTGTAAAGC+TGG - Chr1:57531749-57531768 MsG0180003155.01.T01:CDS 20.0%
!!! ACAAGAAATTGCAAAAATTT+TGG - Chr1:57526707-57526726 MsG0180003155.01.T01:CDS 20.0%
!!! ACTAATACTACCTTTAAAAT+TGG + Chr1:57527900-57527919 None:intergenic 20.0%
!!! ACTGTTTTCATATAAGTTAT+AGG + Chr1:57526879-57526898 None:intergenic 20.0%
!!! ATTTTCATTCATAAAATCTC+TGG - Chr1:57528816-57528835 MsG0180003155.01.T01:intron 20.0%
!!! CAAGAAATTGCAAAAATTTT+GGG - Chr1:57526708-57526727 MsG0180003155.01.T01:CDS 20.0%
!!! CTTCTCTCTTTTTTTTTTTT+TGG + Chr1:57530637-57530656 None:intergenic 20.0%
!!! TCTTTTCATCATTTTAGAAT+CGG + Chr1:57529231-57529250 None:intergenic 20.0%
! AAAATTAATTACAAAAGCGG+AGG + Chr1:57527687-57527706 None:intergenic 25.0%
! AAATGCTCTTAGAAGAAAAA+AGG - Chr1:57525966-57525985 MsG0180003155.01.T01:three_prime_UTR 25.0%
! AAATTTGCAACACATTATAG+GGG - Chr1:57526593-57526612 MsG0180003155.01.T01:intron 25.0%
! AAGAAGTTGTGAATATATGA+AGG + Chr1:57530195-57530214 None:intergenic 25.0%
! AATATTCTATGTTAGCATCA+AGG - Chr1:57527084-57527103 MsG0180003155.01.T01:intron 25.0%
! AATGATGAATCAAGTATAGT+CGG + Chr1:57530151-57530170 None:intergenic 25.0%
! AGAAATTGCTCAATTTATAG+GGG - Chr1:57526656-57526675 MsG0180003155.01.T01:CDS 25.0%
! ATGTACCTTAAATTTGTGTA+GGG - Chr1:57527411-57527430 MsG0180003155.01.T01:intron 25.0%
! ATGTGTATTGAAAGAAAAGA+TGG + Chr1:57529928-57529947 None:intergenic 25.0%
! ATTGTAGGAAAGTTAGTAAA+AGG - Chr1:57529850-57529869 MsG0180003155.01.T01:intron 25.0%
! ATTTAAGAAACCAAGAACAA+AGG - Chr1:57527189-57527208 MsG0180003155.01.T01:intron 25.0%
! ATTTACACAGTTATAGAACT+AGG - Chr1:57531689-57531708 MsG0180003155.01.T01:CDS 25.0%
! CAGAAATCAATATTTACCTA+AGG + Chr1:57527264-57527283 None:intergenic 25.0%
! CATTGAAATAAACAAAAGCA+CGG + Chr1:57531334-57531353 None:intergenic 25.0%
! CGATTTAATACACACAATAT+TGG - Chr1:57531978-57531997 MsG0180003155.01.T01:five_prime_UTR 25.0%
! GAATGAAAATTACTAATCAC+AGG + Chr1:57528806-57528825 None:intergenic 25.0%
! GAATGATTAATGAATGAGTA+GGG + Chr1:57528773-57528792 None:intergenic 25.0%
! GATGCAATTGAAAATTTGAA+AGG - Chr1:57528403-57528422 MsG0180003155.01.T01:intron 25.0%
! GATTCTTTCAAAATCTATCA+CGG + Chr1:57526857-57526876 None:intergenic 25.0%
! GCTATATAGATTTATAGTTG+AGG + Chr1:57530023-57530042 None:intergenic 25.0%
! TAAAATGCATAGTTACAGAA+AGG + Chr1:57531953-57531972 None:intergenic 25.0%
! TAATGCCATGAAAATGATAA+TGG + Chr1:57525758-57525777 None:intergenic 25.0%
! TATAAAAAGGAGGTAGTATA+TGG - Chr1:57528431-57528450 MsG0180003155.01.T01:intron 25.0%
! TATATTCACAACTTCTTCAA+TGG - Chr1:57530198-57530217 MsG0180003155.01.T01:CDS 25.0%
! TATTGATACAATGCTCAATT+AGG + Chr1:57528491-57528510 None:intergenic 25.0%
! TATTTGTTTGTTTGAACATG+AGG - Chr1:57527851-57527870 MsG0180003155.01.T01:intron 25.0%
! TCAATTTGGTCCTATATTTA+GGG + Chr1:57528208-57528227 None:intergenic 25.0%
! TCATTCATTCAAAGTTATCA+AGG + Chr1:57530045-57530064 None:intergenic 25.0%
! TGAATGATTAATGAATGAGT+AGG + Chr1:57528774-57528793 None:intergenic 25.0%
! TGACATATTTATATCGTGTT+TGG - Chr1:57531237-57531256 MsG0180003155.01.T01:intron 25.0%
! TGACTCTTTCTATGAAAAAT+AGG + Chr1:57528691-57528710 None:intergenic 25.0%
! TGCAATTGAAAATTTGAAAG+GGG - Chr1:57528405-57528424 MsG0180003155.01.T01:intron 25.0%
! TTGTTTGGATAAAAGAAAAC+TGG + Chr1:57531911-57531930 None:intergenic 25.0%
! TTTACACAGTTATAGAACTA+GGG - Chr1:57531690-57531709 MsG0180003155.01.T01:CDS 25.0%
!! AAAAAGCTTTTAACAACGTA+TGG + Chr1:57530568-57530587 None:intergenic 25.0%
!! ACTCATTTGAATGTAGTTTT+AGG + Chr1:57531269-57531288 None:intergenic 25.0%
!! ATCTTTTCTTTCAATACACA+TGG - Chr1:57529927-57529946 MsG0180003155.01.T01:intron 25.0%
!! ATTTGATTAATTTTGTGTCC+AGG - Chr1:57529397-57529416 MsG0180003155.01.T01:intron 25.0%
!! GATAACTTTTTGTATTTCAC+TGG - Chr1:57530063-57530082 MsG0180003155.01.T01:intron 25.0%
!! TCTAAGATAGCTTATGAAAA+CGG - Chr1:57526357-57526376 MsG0180003155.01.T01:intron 25.0%
!! TCTTTGCATTTTCATTGATA+GGG - Chr1:57527943-57527962 MsG0180003155.01.T01:intron 25.0%
!! TCTTTTCTTTCAATACACAT+GGG - Chr1:57529928-57529947 MsG0180003155.01.T01:intron 25.0%
!! TGATGATGTACGTTATTATA+TGG - Chr1:57528540-57528559 MsG0180003155.01.T01:intron 25.0%
!! TTCTTTGCATTTTCATTGAT+AGG - Chr1:57527942-57527961 MsG0180003155.01.T01:intron 25.0%
!!! AAAGGTAATTTTTGAAGTCA+TGG + Chr1:57530300-57530319 None:intergenic 25.0%
!!! AGGACTTTCCTTTTTAATTA+GGG + Chr1:57527159-57527178 None:intergenic 25.0%
!!! ATTTTGAGATTTACATGTAC+AGG + Chr1:57530353-57530372 None:intergenic 25.0%
!!! ATTTTTATTTTTTGTTGGGG+AGG - Chr1:57531646-57531665 MsG0180003155.01.T01:CDS 25.0%
!!! TACCTTTAAAATTGGAGTTT+GGG + Chr1:57527892-57527911 None:intergenic 25.0%
!!! TAGGACTTTCCTTTTTAATT+AGG + Chr1:57527160-57527179 None:intergenic 25.0%
!!! TGCTTTTGTTTATTTCAATG+TGG - Chr1:57531334-57531353 MsG0180003155.01.T01:intron 25.0%
!!! TTTTTATTTTTTGTTGGGGA+GGG - Chr1:57531647-57531666 MsG0180003155.01.T01:CDS 25.0%
AAACACTTGTGATCTTGTTA+GGG - Chr1:57526766-57526785 MsG0180003155.01.T01:intron 30.0%
AAACTTACGGTTGTGTTAAA+CGG + Chr1:57530878-57530897 None:intergenic 30.0%
AAAGATTGAAACTTTGTAGG+TGG + Chr1:57525898-57525917 None:intergenic 30.0%
AAATATAGGACCAAATTGAC+CGG - Chr1:57528209-57528228 MsG0180003155.01.T01:CDS 30.0%
AAGACAAATGATGTCTTCTA+GGG + Chr1:57530612-57530631 None:intergenic 30.0%
AAGATTGAAACTTTGTAGGT+GGG + Chr1:57525897-57525916 None:intergenic 30.0%
AATATCAAATGCTACCAGAT+GGG - Chr1:57529705-57529724 MsG0180003155.01.T01:intron 30.0%
AATGAAGGTAGACAAAAAAC+AGG + Chr1:57529799-57529818 None:intergenic 30.0%
AATGTAACATTATGCAGTTC+GGG + Chr1:57529833-57529852 None:intergenic 30.0%
ACTGCATAATGTTACATTGT+AGG - Chr1:57529835-57529854 MsG0180003155.01.T01:intron 30.0%
AGAGTTCAATGTTATAGTGA+AGG - Chr1:57526296-57526315 MsG0180003155.01.T01:intron 30.0%
AGATGAAAATGAACAGTTGT+CGG + Chr1:57527501-57527520 None:intergenic 30.0%
AGCATTCACCATAAAATTTG+AGG + Chr1:57527614-57527633 None:intergenic 30.0%
AGTACAATAAGAACATTGCA+TGG + Chr1:57528943-57528962 None:intergenic 30.0%
AGTTACAGAAAGGAATATCT+TGG + Chr1:57531943-57531962 None:intergenic 30.0%
ATAAGCTAGAAAACAACTGA+TGG + Chr1:57526821-57526840 None:intergenic 30.0%
ATGAAAGAAAGCAAAAAGCT+AGG + Chr1:57528919-57528938 None:intergenic 30.0%
ATGCAACTAAAAGCAATGAA+AGG + Chr1:57528997-57529016 None:intergenic 30.0%
ATTCAAATGAGTTTCAACGT+GGG - Chr1:57531277-57531296 MsG0180003155.01.T01:intron 30.0%
CAATGTAACATTATGCAGTT+CGG + Chr1:57529834-57529853 None:intergenic 30.0%
CAGGCAAATGAATAAAAAGA+AGG + Chr1:57530334-57530353 None:intergenic 30.0%
CATGTACCTTAAATTTGTGT+AGG - Chr1:57527410-57527429 MsG0180003155.01.T01:intron 30.0%
CGGGATTAACTAATTAATGA+AGG + Chr1:57529814-57529833 None:intergenic 30.0%
CTACTTCTCCCTAATTAAAA+AGG - Chr1:57527148-57527167 MsG0180003155.01.T01:intron 30.0%
CTCAAAAAGATACTTCCATA+TGG + Chr1:57530124-57530143 None:intergenic 30.0%
GATTACCCTACACAAATTTA+AGG + Chr1:57527419-57527438 None:intergenic 30.0%
GGTAAAGATTGAAACTTTGT+AGG + Chr1:57525901-57525920 None:intergenic 30.0%
GGTTTACATAAGAAATTGCA+AGG - Chr1:57526614-57526633 MsG0180003155.01.T01:intron 30.0%
GTCAATTTGGTCCTATATTT+AGG + Chr1:57528209-57528228 None:intergenic 30.0%
TAAACACTTGTGATCTTGTT+AGG - Chr1:57526765-57526784 MsG0180003155.01.T01:intron 30.0%
TAATATCAAATGCTACCAGA+TGG - Chr1:57529704-57529723 MsG0180003155.01.T01:intron 30.0%
TACATCATCAGAAAAGCAAA+TGG + Chr1:57528530-57528549 None:intergenic 30.0%
TACATTTACACCTTTGTTCT+TGG + Chr1:57527202-57527221 None:intergenic 30.0%
TATTATTTGCCTCAAAATGC+TGG - Chr1:57528568-57528587 MsG0180003155.01.T01:intron 30.0%
TCTGGTAGCATTTGATATTA+CGG + Chr1:57529704-57529723 None:intergenic 30.0%
TCTTAGAAGAAAAAAGGTGA+CGG - Chr1:57525972-57525991 MsG0180003155.01.T01:three_prime_UTR 30.0%
TGCAACTAAAAGCAATGAAA+GGG + Chr1:57528996-57529015 None:intergenic 30.0%
TTAGAGAAGAAATTGTTTCC+AGG - Chr1:57530465-57530484 MsG0180003155.01.T01:intron 30.0%
TTCTACCTCTATAAAATCGA+TGG + Chr1:57530502-57530521 None:intergenic 30.0%
TTGAGGGGAAACTAAATAAA+CGG - Chr1:57528017-57528036 MsG0180003155.01.T01:intron 30.0%
! AAATTGCAAAAATTTTGGGC+CGG - Chr1:57526712-57526731 MsG0180003155.01.T01:CDS 30.0%
! AGCATTTGATATTACGGTTT+TGG + Chr1:57529698-57529717 None:intergenic 30.0%
! ATTTTCATTGATAGGGACTA+GGG - Chr1:57527950-57527969 MsG0180003155.01.T01:intron 30.0%
! CTACACAAATTTAAGGTACA+TGG + Chr1:57527412-57527431 None:intergenic 30.0%
! CTTCACCATTATCATTTTCA+TGG - Chr1:57525750-57525769 MsG0180003155.01.T01:three_prime_UTR 30.0%
! CTTTTCTTTCAATACACATG+GGG - Chr1:57529929-57529948 MsG0180003155.01.T01:intron 30.0%
! GACAAAAAAGCATACAATGT+TGG + Chr1:57529084-57529103 None:intergenic 30.0%
! GATTTGTACTATACTTTTGC+AGG - Chr1:57529636-57529655 MsG0180003155.01.T01:intron 30.0%
! GGTTTGATGCAATTGTTATT+GGG - Chr1:57526067-57526086 MsG0180003155.01.T01:three_prime_UTR 30.0%
! GTAATCTGATATGTCACTTA+CGG + Chr1:57529572-57529591 None:intergenic 30.0%
! GTTAAGTTGTTATCCAAACA+TGG - Chr1:57526479-57526498 MsG0180003155.01.T01:intron 30.0%
! TCAAATTTTATGGTGAATGC+TGG - Chr1:57527613-57527632 MsG0180003155.01.T01:intron 30.0%
! TGGTACTTATCTAGAACAAT+TGG - Chr1:57530083-57530102 MsG0180003155.01.T01:intron 30.0%
! TGTCTTGGTAACTATACAAA+TGG - Chr1:57529100-57529119 MsG0180003155.01.T01:intron 30.0%
! TTCTGAAAAAACTGTCCAAA+AGG + Chr1:57527795-57527814 None:intergenic 30.0%
! TTGAAAGGGGTCTTATAAAA+AGG - Chr1:57528418-57528437 MsG0180003155.01.T01:intron 30.0%
! TTTTCTTTCAATACACATGG+GGG - Chr1:57529930-57529949 MsG0180003155.01.T01:intron 30.0%
!! AAGTTATTTTGCCCATGAAA+AGG - Chr1:57527581-57527600 MsG0180003155.01.T01:CDS 30.0%
!! CTACCTTTAAAATTGGAGTT+TGG + Chr1:57527893-57527912 None:intergenic 30.0%
!! GCTTTAAGGTTTGTTTAGAT+TGG - Chr1:57526501-57526520 MsG0180003155.01.T01:intron 30.0%
!! TTCATTGCTTTTAGTTGCAT+TGG - Chr1:57528997-57529016 MsG0180003155.01.T01:intron 30.0%
!!! AGCATTTTGAGGCAAATAAT+AGG + Chr1:57528569-57528588 None:intergenic 30.0%
!!! ATCATCCATCGATTTTATAG+AGG - Chr1:57530494-57530513 MsG0180003155.01.T01:intron 30.0%
!!! ATGTTCTTGTTTTCTGTTCT+AGG - Chr1:57530380-57530399 MsG0180003155.01.T01:intron 30.0%
!!! CATTGTATGCTTTTTTGTCT+TGG - Chr1:57529085-57529104 MsG0180003155.01.T01:intron 30.0%
!!! TGTTCTTGTTTTCTGTTCTA+GGG - Chr1:57530381-57530400 MsG0180003155.01.T01:intron 30.0%
!!! TGTTGCAAATTTTTTTTGCC+CGG + Chr1:57526585-57526604 None:intergenic 30.0%
AAACTCATTCTCTCTCTGAA+GGG + Chr1:57528304-57528323 None:intergenic 35.0%
AAAGCATACAATGTTGGACT+TGG + Chr1:57529078-57529097 None:intergenic 35.0%
AAATGCAAAGAAGATATGCC+AGG + Chr1:57527934-57527953 None:intergenic 35.0%
AAATGGTGACAATCTGTATC+TGG + Chr1:57529976-57529995 None:intergenic 35.0%
AAGAGAAGGGATTTAAGTGA+AGG - Chr1:57526045-57526064 MsG0180003155.01.T01:three_prime_UTR 35.0%
AAGTGAAGCAGTATTACTCT+TGG - Chr1:57528086-57528105 MsG0180003155.01.T01:intron 35.0%
AATCTATCACGGAGAACTTA+TGG + Chr1:57526846-57526865 None:intergenic 35.0%
ACAAACCTTAAAGCCATGTT+TGG + Chr1:57526495-57526514 None:intergenic 35.0%
ACCATGCTAGCATTAATCAT+TGG + Chr1:57528886-57528905 None:intergenic 35.0%
ACTAATGTCAAGCATTCAAC+TGG + Chr1:57527819-57527838 None:intergenic 35.0%
AGAGAAGGGATTTAAGTGAA+GGG - Chr1:57526046-57526065 MsG0180003155.01.T01:three_prime_UTR 35.0%
AGATTGAAACTTTGTAGGTG+GGG + Chr1:57525896-57525915 None:intergenic 35.0%
AGCAAAATTAATGAGGTCAG+AGG + Chr1:57530531-57530550 None:intergenic 35.0%
AGTTATTCGATTCTGTCAGA+AGG - Chr1:57528661-57528680 MsG0180003155.01.T01:intron 35.0%
ATAACTAGTTGCATCTACCT+CGG + Chr1:57528647-57528666 None:intergenic 35.0%
ATAGATGGTCTTTACTGTGT+TGG - Chr1:57531002-57531021 MsG0180003155.01.T01:intron 35.0%
CAAAACATCGTACACAACAA+TGG + Chr1:57529179-57529198 None:intergenic 35.0%
CAAGACAAATGATGTCTTCT+AGG + Chr1:57530613-57530632 None:intergenic 35.0%
CATTCAAATGAGTTTCAACG+TGG - Chr1:57531276-57531295 MsG0180003155.01.T01:intron 35.0%
CCTTAGTCAATAATAGCTTG+AGG - Chr1:57527324-57527343 MsG0180003155.01.T01:intron 35.0%
GGGTTTGATGCAATTGTTAT+TGG - Chr1:57526066-57526085 MsG0180003155.01.T01:three_prime_UTR 35.0%
GGTTGTCTACCATATGAATT+CGG + Chr1:57528126-57528145 None:intergenic 35.0%
GTTGTCTACCATATGAATTC+GGG + Chr1:57528125-57528144 None:intergenic 35.0%
TAAACTCATTCTCTCTCTGA+AGG + Chr1:57528305-57528324 None:intergenic 35.0%
TAACATTATTACGGGTTTGC+TGG - Chr1:57528367-57528386 MsG0180003155.01.T01:intron 35.0%
TACCTAATAGCATAAACCAG+TGG - Chr1:57526536-57526555 MsG0180003155.01.T01:intron 35.0%
TATTTACCTAAGGCAACTCA+TGG + Chr1:57527254-57527273 None:intergenic 35.0%
TCCAATGATTAATGCTAGCA+TGG - Chr1:57528882-57528901 MsG0180003155.01.T01:intron 35.0%
TCTATAACTGTGTAAATGCG+AGG + Chr1:57531686-57531705 None:intergenic 35.0%
TCTATGAAAGACAACAACTG+TGG + Chr1:57528622-57528641 None:intergenic 35.0%
TCTCTCAAGAATCGAATATG+AGG - Chr1:57530404-57530423 MsG0180003155.01.T01:intron 35.0%
TCTTGGTACAACTCTTTGTT+TGG + Chr1:57531926-57531945 None:intergenic 35.0%
TCTTTACCTTCATGTAGCTA+TGG - Chr1:57525913-57525932 MsG0180003155.01.T01:three_prime_UTR 35.0%
TGGAAGGTTTGTCTTAATTG+AGG - Chr1:57527633-57527652 MsG0180003155.01.T01:intron 35.0%
TTGCAAACAGTTTACAGCTA+TGG + Chr1:57531132-57531151 None:intergenic 35.0%
TTTGTGTACCCGAATTCATA+TGG - Chr1:57528114-57528133 MsG0180003155.01.T01:intron 35.0%
! AAAGGGGTCTTATAAAAAGG+AGG - Chr1:57528421-57528440 MsG0180003155.01.T01:intron 35.0%
! AAGAAGGCACAGCATAAAAA+AGG + Chr1:57530318-57530337 None:intergenic 35.0%
! AATTGAGCATGGTTGGTTAA+TGG + Chr1:57525825-57525844 None:intergenic 35.0%
! AGAAGTATGTTATACCTGGT+GGG - Chr1:57526157-57526176 MsG0180003155.01.T01:exon 35.0%
! AGGCCATTGTTATTAGTTAG+TGG - Chr1:57527104-57527123 MsG0180003155.01.T01:intron 35.0%
! AGGGACTAATTGTTTCTTTC+TGG - Chr1:57526985-57527004 MsG0180003155.01.T01:intron 35.0%
! ATGCAATTGTTATTGGGTCT+GGG - Chr1:57526073-57526092 MsG0180003155.01.T01:three_prime_UTR 35.0%
! ATTTTATGGTGAATGCTGGA+AGG - Chr1:57527617-57527636 MsG0180003155.01.T01:intron 35.0%
! CAACTTGATAACACAAGCAT+TGG - Chr1:57527440-57527459 MsG0180003155.01.T01:intron 35.0%
! CATTGTTGTGTACGATGTTT+TGG - Chr1:57529177-57529196 MsG0180003155.01.T01:intron 35.0%
! CATTTTCATTGATAGGGACT+AGG - Chr1:57527949-57527968 MsG0180003155.01.T01:intron 35.0%
! CCTCAAGCTATTATTGACTA+AGG + Chr1:57527327-57527346 None:intergenic 35.0%
! CTCCCAAACTCCAATTTTAA+AGG - Chr1:57527887-57527906 MsG0180003155.01.T01:intron 35.0%
! GAAGACCTCAATTTTCATCT+GGG - Chr1:57525935-57525954 MsG0180003155.01.T01:three_prime_UTR 35.0%
! GTGCCACTAACTAATAACAA+TGG + Chr1:57527110-57527129 None:intergenic 35.0%
! GTTAGAAACGGAGAGTATAA+GGG + Chr1:57525848-57525867 None:intergenic 35.0%
! GTTATCCAAACATGGCTTTA+AGG - Chr1:57526487-57526506 MsG0180003155.01.T01:intron 35.0%
! GTTGGTTCTTCTGTTATGTT+TGG - Chr1:57526219-57526238 MsG0180003155.01.T01:intron 35.0%
! TATGTTTGGTTTCAGTGACA+AGG - Chr1:57526233-57526252 MsG0180003155.01.T01:intron 35.0%
! TATTAGTTTCTATTGCCACC+TGG - Chr1:57527913-57527932 MsG0180003155.01.T01:intron 35.0%
! TATTTTGCCCATGAAAAGGA+CGG - Chr1:57527585-57527604 MsG0180003155.01.T01:CDS 35.0%
! TGAAAGTTCTCTTCCTCTTT+TGG + Chr1:57529886-57529905 None:intergenic 35.0%
! TGTACTATACTTTTGCAGGT+AGG - Chr1:57529640-57529659 MsG0180003155.01.T01:intron 35.0%
! TTGGAGAAGTATGTTATACC+TGG - Chr1:57526153-57526172 MsG0180003155.01.T01:exon 35.0%
! TTTCAATGCTCTGAATTCGT+TGG - Chr1:57527741-57527760 MsG0180003155.01.T01:intron 35.0%
!! AAAAAGTCACCTGTTTTGGA+CGG - Chr1:57531509-57531528 MsG0180003155.01.T01:CDS 35.0%
!! GCTATGCTTTAGAAATGGAA+TGG - Chr1:57527010-57527029 MsG0180003155.01.T01:intron 35.0%
!! GCTTTAGAAATGGAATGGAA+TGG - Chr1:57527015-57527034 MsG0180003155.01.T01:intron 35.0%
!! TTTTATTGGTAACCACTGCT+CGG + Chr1:57530245-57530264 None:intergenic 35.0%
!!! GAGTTCTGGGTTTTATCATA+GGG - Chr1:57526179-57526198 MsG0180003155.01.T01:CDS 35.0%
!!! GTTGCAAATTTTTTTTGCCC+GGG + Chr1:57526584-57526603 None:intergenic 35.0%
AAACTGTCCAAAAGGTAGAG+TGG + Chr1:57527787-57527806 None:intergenic 40.0%
AAATGAACAGTTGTCGGATC+AGG + Chr1:57527495-57527514 None:intergenic 40.0%
AAGAAACAATTAGTCCCTGC+TGG + Chr1:57526983-57527002 None:intergenic 40.0%
ACTTGCTTTCAGAGCATAGA+TGG - Chr1:57530987-57531006 MsG0180003155.01.T01:intron 40.0%
AGAAACAATTAGTCCCTGCT+GGG + Chr1:57526982-57527001 None:intergenic 40.0%
AGTTAGAGTTGGGGGTTAAA+AGG + Chr1:57530755-57530774 None:intergenic 40.0%
ATAAGGGAATTGAGCATGGT+TGG + Chr1:57525832-57525851 None:intergenic 40.0%
ATTGCAAAGTCCTTGGCAAA+AGG - Chr1:57529476-57529495 MsG0180003155.01.T01:intron 40.0%
CAACTACCTCAAGCACAAAA+TGG + Chr1:57529993-57530012 None:intergenic 40.0%
CAACTTCTTCAATGGACGAT+TGG - Chr1:57530206-57530225 MsG0180003155.01.T01:CDS 40.0%
CATGACCCAGATGAAAATTG+AGG + Chr1:57525943-57525962 None:intergenic 40.0%
CCACCTCTATCCCTAAATAT+AGG - Chr1:57528195-57528214 MsG0180003155.01.T01:CDS 40.0%
CCTATATTTAGGGATAGAGG+TGG + Chr1:57528198-57528217 None:intergenic 40.0%
CGTACACAACAATGGAAGAA+TGG + Chr1:57529171-57529190 None:intergenic 40.0%
CTAATAGCATAAACCAGTGG+CGG - Chr1:57526539-57526558 MsG0180003155.01.T01:intron 40.0%
CTAGAACAATTGGACCAGTT+TGG - Chr1:57530093-57530112 MsG0180003155.01.T01:intron 40.0%
CTGAATATACTTCCTGGCTA+TGG + Chr1:57528596-57528615 None:intergenic 40.0%
GAGTATAAGGGAATTGAGCA+TGG + Chr1:57525836-57525855 None:intergenic 40.0%
GATTCATCATTAGCTCCTGA+AGG - Chr1:57530160-57530179 MsG0180003155.01.T01:CDS 40.0%
GCAAAAGGTCTAGTTGATCA+GGG - Chr1:57529491-57529510 MsG0180003155.01.T01:intron 40.0%
GGAATTCAGAATGTTGCTAC+TGG - Chr1:57528238-57528257 MsG0180003155.01.T01:CDS 40.0%
GGGTAGTCAGATACTTTACA+AGG - Chr1:57529511-57529530 MsG0180003155.01.T01:intron 40.0%
GGTCCTATATTTAGGGATAG+AGG + Chr1:57528201-57528220 None:intergenic 40.0%
GTTATTGCTGTAGCTTTCTC+AGG - Chr1:57531050-57531069 MsG0180003155.01.T01:intron 40.0%
TCATCCATATAAGTCGACAC+AGG + Chr1:57528147-57528166 None:intergenic 40.0%
TCGCAATTTGATGCACAAGA+TGG - Chr1:57531789-57531808 MsG0180003155.01.T01:CDS 40.0%
TCTTGTGCATCAAATTGCGA+TGG + Chr1:57531789-57531808 None:intergenic 40.0%
TGGATCCTGAATATACTTCC+TGG + Chr1:57528602-57528621 None:intergenic 40.0%
TGTCATCCCTACATTTCCAA+AGG + Chr1:57529267-57529286 None:intergenic 40.0%
! AAGTATCGTCGATGTGTCTT+AGG + Chr1:57530791-57530810 None:intergenic 40.0%
! AAGTCATGGAAGCACACAAA+AGG + Chr1:57530286-57530305 None:intergenic 40.0%
! AGCTGCATAGAATCCGATTT+TGG - Chr1:57531841-57531860 MsG0180003155.01.T01:CDS 40.0%
! ATCAACTAGACCTTTTGCCA+AGG + Chr1:57529489-57529508 None:intergenic 40.0%
! ATTGTTATTGGGTCTGGGAT+TGG - Chr1:57526078-57526097 MsG0180003155.01.T01:three_prime_UTR 40.0%
! CAAAAGCACGGCAATAATGA+AGG + Chr1:57531322-57531341 None:intergenic 40.0%
! CATAGCCAGGAAGTATATTC+AGG - Chr1:57528594-57528613 MsG0180003155.01.T01:intron 40.0%
! CATTTTGTGCTTGAGGTAGT+TGG - Chr1:57529991-57530010 MsG0180003155.01.T01:intron 40.0%
! GAAGCACCTTTGGAAATGTA+GGG - Chr1:57529258-57529277 MsG0180003155.01.T01:intron 40.0%
! GACGGCATCCTCAAATTTTA+TGG - Chr1:57527603-57527622 MsG0180003155.01.T01:intron 40.0%
! GAGAAGTATGTTATACCTGG+TGG - Chr1:57526156-57526175 MsG0180003155.01.T01:exon 40.0%
! GATGCAATTGTTATTGGGTC+TGG - Chr1:57526072-57526091 MsG0180003155.01.T01:three_prime_UTR 40.0%
! GCTGCATAGAATCCGATTTT+GGG - Chr1:57531842-57531861 MsG0180003155.01.T01:CDS 40.0%
! GCTTGGTTGGTTAAGAACAT+TGG - Chr1:57531547-57531566 MsG0180003155.01.T01:CDS 40.0%
! GGAAGACCTCAATTTTCATC+TGG - Chr1:57525934-57525953 MsG0180003155.01.T01:three_prime_UTR 40.0%
! GGAGAAAAAGTCACCTGTTT+TGG - Chr1:57531505-57531524 MsG0180003155.01.T01:CDS 40.0%
! GGTTAGAAACGGAGAGTATA+AGG + Chr1:57525849-57525868 None:intergenic 40.0%
! TCACTGTCATTCTAGCTATC+TGG + Chr1:57529043-57529062 None:intergenic 40.0%
! TTGTCACCATTTTGTGCTTG+AGG - Chr1:57529984-57530003 MsG0180003155.01.T01:intron 40.0%
!! ACAACCTGTGTCGACTTATA+TGG - Chr1:57528140-57528159 MsG0180003155.01.T01:intron 40.0%
!! AGAAGCACCTTTGGAAATGT+AGG - Chr1:57529257-57529276 MsG0180003155.01.T01:intron 40.0%
!! AGGAAAAAGTGGTGGATAGT+GGG - Chr1:57526022-57526041 MsG0180003155.01.T01:three_prime_UTR 40.0%
!! ATAGAATCCGATTTTGGGAG+TGG - Chr1:57531847-57531866 MsG0180003155.01.T01:CDS 40.0%
!! GAGGGGTATACTTTTGATGT+TGG - Chr1:57526201-57526220 MsG0180003155.01.T01:CDS 40.0%
!! TAGAATCCGATTTTGGGAGT+GGG - Chr1:57531848-57531867 MsG0180003155.01.T01:CDS 40.0%
!! TCTGGGTTTTATCATAGGGA+GGG - Chr1:57526183-57526202 MsG0180003155.01.T01:CDS 40.0%
!! TGGCTGCTATGCTTTAGAAA+TGG - Chr1:57527005-57527024 MsG0180003155.01.T01:intron 40.0%
!! TTCTGGGTTTTATCATAGGG+AGG - Chr1:57526182-57526201 MsG0180003155.01.T01:CDS 40.0%
!!! AGGTGCTAGAGTTTTGGTTT+TGG - Chr1:57526134-57526153 MsG0180003155.01.T01:three_prime_UTR 40.0%
!!! GGAGTTCTGGGTTTTATCAT+AGG - Chr1:57526178-57526197 MsG0180003155.01.T01:CDS 40.0%
!!! TGTGAAAGGTGCTAGAGTTT+TGG - Chr1:57526128-57526147 MsG0180003155.01.T01:three_prime_UTR 40.0%
!!! TTATTTTTTGTTGGGGAGGG+AGG - Chr1:57531650-57531669 MsG0180003155.01.T01:CDS 40.0%
AAGCAAAAAGCTAGGTGAGC+AGG + Chr1:57528911-57528930 None:intergenic 45.0%
ACAGCAATAACACCTTGTCC+AGG + Chr1:57531041-57531060 None:intergenic 45.0%
ACCAGTTTGGAGGAACCATA+TGG - Chr1:57530106-57530125 MsG0180003155.01.T01:CDS 45.0%
AGAGAGAGCAAGAGAGAAAG+AGG + Chr1:57529365-57529384 None:intergenic 45.0%
AGCACGGCAATAATGAAGGA+CGG + Chr1:57531318-57531337 None:intergenic 45.0%
AGCATTCCAAAGGGGTTGTT+AGG - Chr1:57530848-57530867 MsG0180003155.01.T01:intron 45.0%
AGGAGAATCACTGCCAAAAG+AGG - Chr1:57529870-57529889 MsG0180003155.01.T01:intron 45.0%
AGTGAAAGGGATGGTGAAGT+TGG - Chr1:57525999-57526018 MsG0180003155.01.T01:three_prime_UTR 45.0%
AGTTGGGGGTTAAAAGGTTC+AGG + Chr1:57530749-57530768 None:intergenic 45.0%
ATATGAGGCAAAGAAGCAGG+TGG - Chr1:57530419-57530438 MsG0180003155.01.T01:intron 45.0%
ATTATGCTGTGTATCCCAGC+AGG - Chr1:57526965-57526984 MsG0180003155.01.T01:intron 45.0%
CAGCAATAACACCTTGTCCA+GGG + Chr1:57531040-57531059 None:intergenic 45.0%
CATCGAGTAGCTGCAGATAT+TGG - Chr1:57531086-57531105 MsG0180003155.01.T01:intron 45.0%
CATTCTGAATTCCCGTGATC+CGG + Chr1:57528231-57528250 None:intergenic 45.0%
CCAGGATTATTGTAAAGCCC+GGG - Chr1:57526564-57526583 MsG0180003155.01.T01:intron 45.0%
CCCAACTCTAACTCTAGGTA+GGG - Chr1:57530762-57530781 MsG0180003155.01.T01:intron 45.0%
CCCTACCTAGAGTTAGAGTT+GGG + Chr1:57530765-57530784 None:intergenic 45.0%
CCTACCTAGAGTTAGAGTTG+GGG + Chr1:57530764-57530783 None:intergenic 45.0%
CGAATATGAGGCAAAGAAGC+AGG - Chr1:57530416-57530435 MsG0180003155.01.T01:intron 45.0%
CTACCTAGAGTTAGAGTTGG+GGG + Chr1:57530763-57530782 None:intergenic 45.0%
GAACAATTGGACCAGTTTGG+AGG - Chr1:57530096-57530115 MsG0180003155.01.T01:CDS 45.0%
GAAGTTGGAGGAAAAAGTGG+TGG - Chr1:57526014-57526033 MsG0180003155.01.T01:three_prime_UTR 45.0%
GAGGCAAAACGCCTTATAAG+GGG + Chr1:57527668-57527687 None:intergenic 45.0%
GCAATAATGAAGGACGGTAC+AGG + Chr1:57531312-57531331 None:intergenic 45.0%
GCCAGGATTATTGTAAAGCC+CGG - Chr1:57526563-57526582 MsG0180003155.01.T01:intron 45.0%
GGAGGCAAAACGCCTTATAA+GGG + Chr1:57527669-57527688 None:intergenic 45.0%
GGCAAAAGGTCTAGTTGATC+AGG - Chr1:57529490-57529509 MsG0180003155.01.T01:intron 45.0%
GGTCTTCCATAGCTACATGA+AGG + Chr1:57525922-57525941 None:intergenic 45.0%
GGTGAAGTTGGAGGAAAAAG+TGG - Chr1:57526011-57526030 MsG0180003155.01.T01:three_prime_UTR 45.0%
GTGGGATTAACTACCCTCTT+GGG - Chr1:57529441-57529460 MsG0180003155.01.T01:intron 45.0%
GTTCTGTGTGACAGACACTT+TGG - Chr1:57529419-57529438 MsG0180003155.01.T01:intron 45.0%
GTTGGAGCTAAAATCGCTTG+AGG - Chr1:57527759-57527778 MsG0180003155.01.T01:intron 45.0%
GTTGGGGGTTAAAAGGTTCA+GGG + Chr1:57530748-57530767 None:intergenic 45.0%
GTTGTCTTTCATAGATGCCG+AGG - Chr1:57528627-57528646 MsG0180003155.01.T01:intron 45.0%
TAACCCCCAACTCTAACTCT+AGG - Chr1:57530757-57530776 MsG0180003155.01.T01:intron 45.0%
TCATGACCATGAGTTGCCTT+AGG - Chr1:57527245-57527264 MsG0180003155.01.T01:CDS 45.0%
TCCATATGGTTCCTCCAAAC+TGG + Chr1:57530110-57530129 None:intergenic 45.0%
TCCCTACCTAGAGTTAGAGT+TGG + Chr1:57530766-57530785 None:intergenic 45.0%
TGAAGGATATGACGACCTTC+AGG + Chr1:57530178-57530197 None:intergenic 45.0%
TGCAAAGAAGATATGCCAGG+TGG + Chr1:57527931-57527950 None:intergenic 45.0%
TGCTTCACTTCAGCAGCTAA+TGG + Chr1:57528076-57528095 None:intergenic 45.0%
TGGGATTAACTACCCTCTTG+GGG - Chr1:57529442-57529461 MsG0180003155.01.T01:intron 45.0%
TGGTGACAATCTGTATCTGG+TGG + Chr1:57529973-57529992 None:intergenic 45.0%
TGTGTGACAGACACTTTGGT+GGG - Chr1:57529423-57529442 MsG0180003155.01.T01:intron 45.0%
TTATACCTGGTGGGAGTTCT+GGG - Chr1:57526166-57526185 MsG0180003155.01.T01:CDS 45.0%
TTATGCTGTGTATCCCAGCA+GGG - Chr1:57526966-57526985 MsG0180003155.01.T01:intron 45.0%
TTCATTGATAGGGACTAGGG+AGG - Chr1:57527953-57527972 MsG0180003155.01.T01:intron 45.0%
TTCTTCAATGGACGATTGGC+AGG - Chr1:57530210-57530229 MsG0180003155.01.T01:CDS 45.0%
! AAGGTGACGGTGAAAGTGAA+AGG - Chr1:57525985-57526004 MsG0180003155.01.T01:three_prime_UTR 45.0%
! AGGTGACGGTGAAAGTGAAA+GGG - Chr1:57525986-57526005 MsG0180003155.01.T01:three_prime_UTR 45.0%
! ATAGAACTAGGGCGTTCGAT+CGG - Chr1:57531701-57531720 MsG0180003155.01.T01:CDS 45.0%
! GCATGGTTGGTTAATGGAAG+TGG + Chr1:57525819-57525838 None:intergenic 45.0%
! TACTTTTGCAGGTAGGAGTG+AGG - Chr1:57529647-57529666 MsG0180003155.01.T01:intron 45.0%
! TCGATGGATGATCTAAGACC+TGG + Chr1:57530486-57530505 None:intergenic 45.0%
! TTATTGGGTCTGGGATTGGT+GGG - Chr1:57526082-57526101 MsG0180003155.01.T01:three_prime_UTR 45.0%
!! ACACAAGCATTGGAAGCAGT+TGG - Chr1:57527450-57527469 MsG0180003155.01.T01:intron 45.0%
!! AGAATCCGATTTTGGGAGTG+GGG - Chr1:57531849-57531868 MsG0180003155.01.T01:CDS 45.0%
!! AGATGATGCAGAAGCACCTT+TGG - Chr1:57529248-57529267 MsG0180003155.01.T01:intron 45.0%
!! CGCCACTGGTTTATGCTATT+AGG + Chr1:57526541-57526560 None:intergenic 45.0%
!! CTGGGTTTTATCATAGGGAG+GGG - Chr1:57526184-57526203 MsG0180003155.01.T01:CDS 45.0%
!! GAGGAAAAAGTGGTGGATAG+TGG - Chr1:57526021-57526040 MsG0180003155.01.T01:three_prime_UTR 45.0%
!!! AGGGAGGCGTTATCTTTTAG+CGG - Chr1:57527969-57527988 MsG0180003155.01.T01:intron 45.0%
!!! ACTTTTTATTATTAAAAAAT+AGG - Chr1:57531479-57531498 MsG0180003155.01.T01:CDS 5.0%
!!! CTTTTTATTATTAAAAAATA+GGG - Chr1:57531480-57531499 MsG0180003155.01.T01:CDS 5.0%
AAAATGCTGGAGCCATAGCC+AGG - Chr1:57528581-57528600 MsG0180003155.01.T01:intron 50.0%
AATGCCACGCAGCATTCCAA+AGG - Chr1:57530838-57530857 MsG0180003155.01.T01:intron 50.0%
ACACATGGGGGTTAAAGCAG+AGG - Chr1:57529942-57529961 MsG0180003155.01.T01:intron 50.0%
ACTCGAACAGAGAGGTGGTT+TGG + Chr1:57527525-57527544 None:intergenic 50.0%
ACTTTGTAGGTGGGGTGTGA+TGG + Chr1:57525888-57525907 None:intergenic 50.0%
AGCAGTTGGTTGTCAGATGG+AGG - Chr1:57527464-57527483 MsG0180003155.01.T01:intron 50.0%
AGTGTCTGTCACACAGAACC+TGG + Chr1:57529418-57529437 None:intergenic 50.0%
ATGCCACGCAGCATTCCAAA+GGG - Chr1:57530839-57530858 MsG0180003155.01.T01:intron 50.0%
CACGAGTATATCACCGAGCA+GGG - Chr1:57529541-57529560 MsG0180003155.01.T01:intron 50.0%
CCCCAACTCTAACTCTAGGT+AGG - Chr1:57530761-57530780 MsG0180003155.01.T01:intron 50.0%
CCCGGGCTTTACAATAATCC+TGG + Chr1:57526567-57526586 None:intergenic 50.0%
CGGAGGCAAAACGCCTTATA+AGG + Chr1:57527670-57527689 None:intergenic 50.0%
CTGTGTGACAGACACTTTGG+TGG - Chr1:57529422-57529441 MsG0180003155.01.T01:intron 50.0%
GAAAGGGATGGTGAAGTTGG+AGG - Chr1:57526002-57526021 MsG0180003155.01.T01:three_prime_UTR 50.0%
GACCAAATTGACCGGATCAC+GGG - Chr1:57528217-57528236 MsG0180003155.01.T01:CDS 50.0%
GACGGTGAAAGTGAAAGGGA+TGG - Chr1:57525990-57526009 MsG0180003155.01.T01:three_prime_UTR 50.0%
GCAGCTATAGAATCCCGCAT+TGG + Chr1:57531827-57531846 None:intergenic 50.0%
GGAAGCAGTTGGTTGTCAGA+TGG - Chr1:57527461-57527480 MsG0180003155.01.T01:intron 50.0%
GGACCAAATTGACCGGATCA+CGG - Chr1:57528216-57528235 MsG0180003155.01.T01:CDS 50.0%
GGCATTCCTAACAACCCCTT+TGG + Chr1:57530857-57530876 None:intergenic 50.0%
GGGATTAACTACCCTCTTGG+GGG - Chr1:57529443-57529462 MsG0180003155.01.T01:intron 50.0%
GGGGTGTGATGGTAGATGAT+GGG + Chr1:57525877-57525896 None:intergenic 50.0%
GGGTGTGATGGTAGATGATG+GGG + Chr1:57525876-57525895 None:intergenic 50.0%
GGTGGGATTAACTACCCTCT+TGG - Chr1:57529440-57529459 MsG0180003155.01.T01:intron 50.0%
GTAGGAGTGAGGCTTTCAGA+TGG - Chr1:57529658-57529677 MsG0180003155.01.T01:intron 50.0%
GTCCATAAGTACCCTCGTCA+CGG + Chr1:57530817-57530836 None:intergenic 50.0%
GTTATACCTGGTGGGAGTTC+TGG - Chr1:57526165-57526184 MsG0180003155.01.T01:CDS 50.0%
TAAAACCCAGAACTCCCACC+AGG + Chr1:57526174-57526193 None:intergenic 50.0%
TCAATGGACGATTGGCAGGT+AGG - Chr1:57530214-57530233 MsG0180003155.01.T01:CDS 50.0%
TCACGAGTATATCACCGAGC+AGG - Chr1:57529540-57529559 MsG0180003155.01.T01:intron 50.0%
TCCATAAGTACCCTCGTCAC+GGG + Chr1:57530816-57530835 None:intergenic 50.0%
TGGGGTGTGATGGTAGATGA+TGG + Chr1:57525878-57525897 None:intergenic 50.0%
TGGTGGGATTGCAAAGTCCT+TGG - Chr1:57529469-57529488 MsG0180003155.01.T01:intron 50.0%
TTCCCGTGATCCGGTCAATT+TGG + Chr1:57528222-57528241 None:intergenic 50.0%
! AAAAATTTTGGGCCGGAGCC+CGG - Chr1:57526719-57526738 MsG0180003155.01.T01:intron 50.0%
! GAGGATGCCGTCCTTTTCAT+GGG + Chr1:57527595-57527614 None:intergenic 50.0%
! GATGGGGGTGTGGTTAGAAA+CGG + Chr1:57525860-57525879 None:intergenic 50.0%
! GCTATGGCTCCAGCATTTTG+AGG + Chr1:57528580-57528599 None:intergenic 50.0%
! GGCGTTATCTTTTAGCGGTG+AGG - Chr1:57527974-57527993 MsG0180003155.01.T01:intron 50.0%
! GGTGTGATGGTAGATGATGG+GGG + Chr1:57525875-57525894 None:intergenic 50.0%
! GTTATTGGGTCTGGGATTGG+TGG - Chr1:57526081-57526100 MsG0180003155.01.T01:three_prime_UTR 50.0%
! TGAGGAGCCACTCTACCTTT+TGG - Chr1:57527777-57527796 MsG0180003155.01.T01:intron 50.0%
! TGAGGATGCCGTCCTTTTCA+TGG + Chr1:57527596-57527615 None:intergenic 50.0%
! TTTGGAATGCTGCGTGGCAT+TGG + Chr1:57530839-57530858 None:intergenic 50.0%
!! AATCCGATTTTGGGAGTGGG+GGG - Chr1:57531851-57531870 MsG0180003155.01.T01:CDS 50.0%
!! GAATCCGATTTTGGGAGTGG+GGG - Chr1:57531850-57531869 MsG0180003155.01.T01:CDS 50.0%
!! GGTGGATAGTGGGAAGAGAA+GGG - Chr1:57526032-57526051 MsG0180003155.01.T01:three_prime_UTR 50.0%
!! TGGAGTCTGCAAAGCGTTGA+CGG + Chr1:57528866-57528885 None:intergenic 50.0%
!! TGGTGGATAGTGGGAAGAGA+AGG - Chr1:57526031-57526050 MsG0180003155.01.T01:three_prime_UTR 50.0%
!! TTTTGGACGGCATGCTGCTT+GGG - Chr1:57531522-57531541 MsG0180003155.01.T01:CDS 50.0%
AATAATCCTGGCTCCGCCAC+TGG + Chr1:57526555-57526574 None:intergenic 55.0%
ACGATACTTAGCCCGTGACG+AGG - Chr1:57530802-57530821 MsG0180003155.01.T01:intron 55.0%
ACTTACGGCTTTGCCCTGCT+CGG + Chr1:57529557-57529576 None:intergenic 55.0%
AGCAGCATGCCGTCCAAAAC+AGG + Chr1:57531521-57531540 None:intergenic 55.0%
AGGTAGGCAATACCGAGCAG+TGG - Chr1:57530230-57530249 MsG0180003155.01.T01:CDS 55.0%
AGGTGTGCCTGTGTGTGTAG+AGG + Chr1:57528471-57528490 None:intergenic 55.0%
AGTGTTTATGCCAGCGACCC+CGG + Chr1:57526753-57526772 None:intergenic 55.0%
CGATACTTAGCCCGTGACGA+GGG - Chr1:57530803-57530822 MsG0180003155.01.T01:intron 55.0%
CTCTGTGCACTCGAACAGAG+AGG + Chr1:57527533-57527552 None:intergenic 55.0%
GACAGTTGCTTCCCTGGACA+AGG - Chr1:57531026-57531045 MsG0180003155.01.T01:intron 55.0%
GGGACTCAGTTGGCTGTGAA+AGG - Chr1:57526114-57526133 MsG0180003155.01.T01:three_prime_UTR 55.0%
GGTGACTGCAGCCCCTTATA+AGG - Chr1:57527654-57527673 MsG0180003155.01.T01:intron 55.0%
GGTGTGCCTGTGTGTGTAGA+GGG + Chr1:57528470-57528489 None:intergenic 55.0%
GTTGGAGACAGTTGCTTCCC+TGG - Chr1:57531020-57531039 MsG0180003155.01.T01:intron 55.0%
GTTGGTTGCTGGGACTCAGT+TGG - Chr1:57526104-57526123 MsG0180003155.01.T01:three_prime_UTR 55.0%
TGACGACCCTCTACACACAC+AGG - Chr1:57528461-57528480 MsG0180003155.01.T01:intron 55.0%
TGCCACGCAGCATTCCAAAG+GGG - Chr1:57530840-57530859 MsG0180003155.01.T01:intron 55.0%
TGTGCACTCGAACAGAGAGG+TGG + Chr1:57527530-57527549 None:intergenic 55.0%
! AAAATTTTGGGCCGGAGCCC+GGG - Chr1:57526720-57526739 MsG0180003155.01.T01:intron 55.0%
! AACTACCCTCTTGGGGGTGT+TGG - Chr1:57529449-57529468 MsG0180003155.01.T01:intron 55.0%
! TGCTGCTTGGGTTGCTTGGT+TGG - Chr1:57531534-57531553 MsG0180003155.01.T01:CDS 55.0%
!! AACCCCTTTGGAATGCTGCG+TGG + Chr1:57530845-57530864 None:intergenic 55.0%
!! GATGGTAGATGATGGGGGTG+TGG + Chr1:57525870-57525889 None:intergenic 55.0%
!! GGATTGGTGGGTTGGTTGCT+GGG - Chr1:57526094-57526113 MsG0180003155.01.T01:three_prime_UTR 55.0%
!! GTTTTGGACGGCATGCTGCT+TGG - Chr1:57531521-57531540 MsG0180003155.01.T01:CDS 55.0%
ATCCCACCAACACCCCCAAG+AGG + Chr1:57529458-57529477 None:intergenic 60.0%
CAGCCCCCCACTCCCAAAAT+CGG + Chr1:57531857-57531876 None:intergenic 60.0%
GCTTAGCTGCGTGCCAATGC+GGG - Chr1:57531811-57531830 MsG0180003155.01.T01:CDS 60.0%
GGCTTAGCTGCGTGCCAATG+CGG - Chr1:57531810-57531829 MsG0180003155.01.T01:CDS 60.0%
GTGTTTATGCCAGCGACCCC+GGG + Chr1:57526752-57526771 None:intergenic 60.0%
TCCCACCAACACCCCCAAGA+GGG + Chr1:57529457-57529476 None:intergenic 60.0%
TTGTTGGGGAGGGAGGAGAG+CGG - Chr1:57531657-57531676 MsG0180003155.01.T01:CDS 60.0%
! CATAAACCAGTGGCGGAGCC+AGG - Chr1:57526546-57526565 MsG0180003155.01.T01:intron 60.0%
! GGCATGCTGCTTGGGTTGCT+TGG - Chr1:57531530-57531549 MsG0180003155.01.T01:CDS 60.0%
! TGGGTCTGGGATTGGTGGGT+TGG - Chr1:57526086-57526105 MsG0180003155.01.T01:three_prime_UTR 60.0%
!! ACCCTCTTGGGGGTGTTGGT+GGG - Chr1:57529453-57529472 MsG0180003155.01.T01:intron 60.0%
!! GCCCGTGACGAGGGTACTTA+TGG - Chr1:57530812-57530831 MsG0180003155.01.T01:intron 60.0%
!! GGGATTGGTGGGTTGGTTGC+TGG - Chr1:57526093-57526112 MsG0180003155.01.T01:three_prime_UTR 60.0%
!! TACCCTCTTGGGGGTGTTGG+TGG - Chr1:57529452-57529471 MsG0180003155.01.T01:intron 60.0%
! AGCGACCCCGGGCACTCGCC+CGG + Chr1:57526741-57526760 None:intergenic 80.0%
! CCGGAGCCCGGGCGAGTGCC+CGG - Chr1:57526731-57526750 MsG0180003155.01.T01:intron 85.0%
! CCGGGCACTCGCCCGGGCTC+CGG + Chr1:57526734-57526753 None:intergenic 85.0%
! CGGAGCCCGGGCGAGTGCCC+GGG - Chr1:57526732-57526751 MsG0180003155.01.T01:intron 85.0%
! GCGACCCCGGGCACTCGCCC+GGG + Chr1:57526740-57526759 None:intergenic 85.0%
! GGAGCCCGGGCGAGTGCCCG+GGG - Chr1:57526733-57526752 MsG0180003155.01.T01:intron 85.0%
! GGGCGAGTGCCCGGGGTCGC+TGG - Chr1:57526740-57526759 MsG0180003155.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr1 gene 57525735 57531997 57525735 ID=MsG0180003155.01;Name=MsG0180003155.01
Chr1 mRNA 57525735 57531997 57525735 ID=MsG0180003155.01.T01;Parent=MsG0180003155.01;Name=MsG0180003155.01.T01;_AED=0.34;_eAED=0.34;_QI=100|0.75|0.88|1|1|1|9|423|454
Chr1 exon 57525735 57526231 57525735 ID=MsG0180003155.01.T01:exon:48802;Parent=MsG0180003155.01.T01
Chr1 exon 57526625 57526733 57526625 ID=MsG0180003155.01.T01:exon:48801;Parent=MsG0180003155.01.T01
Chr1 exon 57526843 57526953 57526843 ID=MsG0180003155.01.T01:exon:48800;Parent=MsG0180003155.01.T01
Chr1 exon 57527217 57527330 57527217 ID=MsG0180003155.01.T01:exon:48799;Parent=MsG0180003155.01.T01
Chr1 exon 57527501 57527621 57527501 ID=MsG0180003155.01.T01:exon:48798;Parent=MsG0180003155.01.T01
Chr1 exon 57528162 57528313 57528162 ID=MsG0180003155.01.T01:exon:48797;Parent=MsG0180003155.01.T01
Chr1 exon 57528829 57528885 57528829 ID=MsG0180003155.01.T01:exon:48796;Parent=MsG0180003155.01.T01
Chr1 exon 57530094 57530300 57530094 ID=MsG0180003155.01.T01:exon:48795;Parent=MsG0180003155.01.T01
Chr1 exon 57531478 57531997 57531478 ID=MsG0180003155.01.T01:exon:48794;Parent=MsG0180003155.01.T01
Chr1 five_prime_UTR 57531898 57531997 57531898 ID=MsG0180003155.01.T01:five_prime_utr;Parent=MsG0180003155.01.T01
Chr1 CDS 57531478 57531897 57531478 ID=MsG0180003155.01.T01:cds;Parent=MsG0180003155.01.T01
Chr1 CDS 57530094 57530300 57530094 ID=MsG0180003155.01.T01:cds;Parent=MsG0180003155.01.T01
Chr1 CDS 57528829 57528885 57528829 ID=MsG0180003155.01.T01:cds;Parent=MsG0180003155.01.T01
Chr1 CDS 57528162 57528313 57528162 ID=MsG0180003155.01.T01:cds;Parent=MsG0180003155.01.T01
Chr1 CDS 57527501 57527621 57527501 ID=MsG0180003155.01.T01:cds;Parent=MsG0180003155.01.T01
Chr1 CDS 57527217 57527330 57527217 ID=MsG0180003155.01.T01:cds;Parent=MsG0180003155.01.T01
Chr1 CDS 57526843 57526953 57526843 ID=MsG0180003155.01.T01:cds;Parent=MsG0180003155.01.T01
Chr1 CDS 57526625 57526733 57526625 ID=MsG0180003155.01.T01:cds;Parent=MsG0180003155.01.T01
Chr1 CDS 57526158 57526231 57526158 ID=MsG0180003155.01.T01:cds;Parent=MsG0180003155.01.T01
Chr1 three_prime_UTR 57525735 57526157 57525735 ID=MsG0180003155.01.T01:three_prime_utr;Parent=MsG0180003155.01.T01
Gene Sequence

>MsG0180003155.01.T01

ATGCTCAATTCCCTTATACTCTCCGTTTCTAACCACACCCCCATCATCTACCATCACACCCCACCTACAAAGTTTCAATCTTTACCTTCATGTAGCTATGGAAGACCTCAATTTTCATCTGGGTCATGCTCAAATGCTCTTAGAAGAAAAAAGGTGACGGTGAAAGTGAAAGGGATGGTGAAGTTGGAGGAAAAAGTGGTGGATAGTGGGAAGAGAAGGGATTTAAGTGAAGGGTTTGATGCAATTGTTATTGGGTCTGGGATTGGTGGGTTGGTTGCTGGGACTCAGTTGGCTGTGAAAGGTGCTAGAGTTTTGGTTTTGGAGAAGTATGTTATACCTGGTGGGAGTTCTGGGTTTTATCATAGGGAGGGGTATACTTTTGATGTTGGTTCTTCTGTTATGTTTGGTTTCAGTGACAAGGGTAATCTCAACTTGATAACACAAGCATTGGAAGCAGTTGGTTGTCAGATGGAGGTAATACCTGATCCGACAACTGTTCATTTTCATCTACCAAACCACCTCTCTGTTCGAGTGCACAGAGAATATGATAAGTTCATTGAAGAACTGACAAGTTATTTTGCCCATGAAAAGGACGGCATCCTCAAATTTTATGGTGAATGCTGGAAGTGTTTTATAGTGAGCACCGTCAACGCTTTGCAGACTCCAATGATTAATGCTAGCATGGTTCTGTGTGACAGACACTTTGGTGGGATTAACTACCCTCTTGGGGGTGTTGGTGGGATTGCAAAGTCCTTGGCAAAAGGTCTAGTTGATCAGGGTAGTCAGATACTTTACAAGGCAAATGTCACGAGTATATCACCGAGCAGGGCAAAGCCTTTGGAGGAACCATATGGAAGTATCTTTTTGAGTATACCGACTATACTTGATTCATCATTAGCTCCTGAAGGTCGTCATATCCTTCATATATTCACAACTTCTTCAATGGACGATTGGCAGGGTCTCTCAAGAATCGAATATGAGGCAAAGAAGCAGGTGGTAGCAGATGAAATCATAAGCAGATTAGAGAAGAAATTGTTTCCAGGTCTTAGATCATCCATCGATTTTATAGAGGTAGGGACACCTAAGACACATCGACGATACTTAGCCCGTGACGAGGGTACTTATGGACCAATGCCACGCAGCATTCCAAAGGGGTTGTTAGGAATGCCGTTTAACACAACCAGCATAGATGGTCTTTACTGTGTTGGAGACAGTTGCTTCCCTGGACAAGGTGTTATTGCTGTAGCTTTCTCAGGAGTTATGTGTGCTCATCGAGTAGCTGCAGATATTGGGTTGGAGAAAAAGTCACCTGTTTTGGACGGCATGCTGCTTGGGTTGCTTGGTTGGTTAAGAACATTGGCATGA

Protein sequence

>MsG0180003155.01.T01

MLNSLILSVSNHTPIIYHHTPPTKFQSLPSCSYGRPQFSSGSCSNALRRKKVTVKVKGMVKLEEKVVDSGKRRDLSEGFDAIVIGSGIGGLVAGTQLAVKGARVLVLEKYVIPGGSSGFYHREGYTFDVGSSVMFGFSDKGNLNLITQALEAVGCQMEVIPDPTTVHFHLPNHLSVRVHREYDKFIEELTSYFAHEKDGILKFYGECWKCFIVSTVNALQTPMINASMVLCDRHFGGINYPLGGVGGIAKSLAKGLVDQGSQILYKANVTSISPSRAKPLEEPYGSIFLSIPTILDSSLAPEGRHILHIFTTSSMDDWQGLSRIEYEAKKQVVADEIISRLEKKLFPGLRSSIDFIEVGTPKTHRRYLARDEGTYGPMPRSIPKGLLGMPFNTTSIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDGMLLGLLGWLRTLA*