Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057640 | sp|Q9FNE9|ATXR6_ARATH | 72.642 | 318 | 84 | 3 | 26 | 341 | 33 | 349 | 1.88e-167 | 473 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057640 | G7I3E6 | 97.368 | 342 | 8 | 1 | 1 | 341 | 1 | 342 | 0.0 | 689 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0057640 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016530 | Msa0057640 | 0.825944 | 3.555050e-54 | -8.615850e-47 |
| Msa0027800 | Msa0057640 | 0.826795 | 2.229391e-54 | -8.615850e-47 |
| Msa0030070 | Msa0057640 | 0.826846 | 2.167515e-54 | -8.615850e-47 |
| Msa0032970 | Msa0057640 | 0.820376 | 7.088469e-53 | -8.615850e-47 |
| Msa0032980 | Msa0057640 | 0.838601 | 2.609935e-57 | -8.615850e-47 |
| Msa0040640 | Msa0057640 | 0.804923 | 1.711193e-49 | -8.615850e-47 |
| Msa0057640 | Msa0062340 | 0.800607 | 1.331104e-48 | -8.615850e-47 |
| Msa0057640 | Msa0078130 | 0.809511 | 1.825237e-50 | -8.615850e-47 |
| Msa0057640 | Msa0091350 | 0.866032 | 3.834054e-65 | -8.615850e-47 |
| Msa0057640 | Msa0093860 | 0.821497 | 3.912116e-53 | -8.615850e-47 |
| Msa0057640 | Msa0098410 | 0.822425 | 2.385825e-53 | -8.615850e-47 |
| Msa0057640 | Msa0103200 | 0.842262 | 2.879756e-58 | -8.615850e-47 |
| Msa0057640 | Msa0106630 | 0.840331 | 9.273055e-58 | -8.615850e-47 |
| Msa0057640 | Msa0115550 | 0.807446 | 5.035998e-50 | -8.615850e-47 |
| Msa0057640 | Msa0123320 | 0.814594 | 1.422573e-51 | -8.615850e-47 |
| Msa0057640 | Msa0125590 | 0.842020 | 3.336743e-58 | -8.615850e-47 |
| Msa0057640 | Msa0127340 | 0.856043 | 4.199396e-62 | -8.615850e-47 |
| Msa0057640 | Msa0127680 | 0.823199 | 1.574900e-53 | -8.615850e-47 |
| Msa0057640 | Msa0140380 | 0.824668 | 7.124690e-54 | -8.615850e-47 |
| Msa0057640 | Msa0153210 | 0.843374 | 1.457431e-58 | -8.615850e-47 |
| Msa0057640 | Msa0158900 | 0.818317 | 2.088256e-52 | -8.615850e-47 |
| Msa0057640 | Msa0159590 | 0.816240 | 6.125048e-52 | -8.615850e-47 |
| Msa0057640 | Msa0159620 | 0.800913 | 1.152748e-48 | -8.615850e-47 |
| Msa0057640 | Msa0160160 | 0.891904 | 2.592364e-74 | -8.615850e-47 |
| Msa0057640 | Msa0160170 | 0.893660 | 5.108865e-75 | -8.615850e-47 |
| Msa0057640 | Msa0160290 | 0.896395 | 3.843980e-76 | -8.615850e-47 |
| Msa0057640 | Msa0165830 | 0.845143 | 4.880654e-59 | -8.615850e-47 |
| Msa0057640 | Msa0170070 | 0.811964 | 5.378370e-51 | -8.615850e-47 |
| Msa0057640 | Msa0184700 | 0.807477 | 4.959163e-50 | -8.615850e-47 |
| Msa0057640 | Msa0186180 | 0.802071 | 6.677172e-49 | -8.615850e-47 |
| Msa0057640 | Msa0186360 | 0.814176 | 1.760205e-51 | -8.615850e-47 |
| Msa0057640 | Msa0272260 | 0.804459 | 2.138782e-49 | -8.615850e-47 |
| Msa0057640 | Msa0341680 | 0.820425 | 6.907505e-53 | -8.615850e-47 |
| Msa0057640 | Msa0368860 | 0.832753 | 7.895264e-56 | -8.615850e-47 |
| Msa0057640 | Msa0373170 | 0.844767 | 6.163535e-59 | -8.615850e-47 |
| Msa0057640 | Msa0373590 | 0.803198 | 3.909163e-49 | -8.615850e-47 |
| Msa0057640 | Msa0382230 | 0.805850 | 1.093626e-49 | -8.615850e-47 |
| Msa0057640 | Msa0383000 | 0.825735 | 3.985106e-54 | -8.615850e-47 |
| Msa0057640 | Msa0412130 | 0.824452 | 8.011767e-54 | -8.615850e-47 |
| Msa0057640 | Msa0413170 | 0.811561 | 6.584062e-51 | -8.615850e-47 |
| Msa0057640 | Msa0416160 | 0.813817 | 2.112314e-51 | -8.615850e-47 |
| Msa0057640 | Msa0420670 | 0.831172 | 1.940946e-55 | -8.615850e-47 |
| Msa0057640 | Msa0421130 | 0.807001 | 6.254223e-50 | -8.615850e-47 |
| Msa0057640 | Msa0421750 | 0.849018 | 4.233304e-60 | -8.615850e-47 |
| Msa0057640 | Msa0433150 | 0.805089 | 1.579601e-49 | -8.615850e-47 |
| Msa0057640 | Msa0433760 | 0.819449 | 1.154756e-52 | -8.615850e-47 |
| Msa0057640 | Msa0462780 | 0.831184 | 1.927046e-55 | -8.615850e-47 |
| Msa0057640 | Msa0466520 | 0.815387 | 9.488331e-52 | -8.615850e-47 |
| Msa0057640 | Msa0466880 | 0.808172 | 3.528733e-50 | -8.615850e-47 |
| Msa0057640 | Msa0467690 | 0.846418 | 2.200042e-59 | -8.615850e-47 |
| Msa0057640 | Msa0477630 | 0.824197 | 9.194398e-54 | -8.615850e-47 |
| Msa0057640 | Msa0478140 | 0.803301 | 3.721815e-49 | -8.615850e-47 |
| Msa0057640 | Msa0480730 | 0.821050 | 4.960322e-53 | -8.615850e-47 |
| Msa0057640 | Msa0504720 | 0.808971 | 2.382618e-50 | -8.615850e-47 |
| Msa0057640 | Msa0507810 | 0.809552 | 1.788904e-50 | -8.615850e-47 |
| Msa0057640 | Msa0507820 | 0.800105 | 1.684786e-48 | -8.615850e-47 |
| Msa0057640 | Msa0507920 | 0.815903 | 7.284005e-52 | -8.615850e-47 |
| Msa0057640 | Msa0512530 | 0.834287 | 3.270634e-56 | -8.615850e-47 |
| Msa0057640 | Msa0513080 | 0.802366 | 5.805983e-49 | -8.615850e-47 |
| Msa0057640 | Msa0513560 | 0.818654 | 1.750879e-52 | -8.615850e-47 |
| Msa0057640 | Msa0514020 | 0.844157 | 8.997174e-59 | -8.615850e-47 |
| Msa0057640 | Msa0514500 | 0.801012 | 1.100692e-48 | -8.615850e-47 |
| Msa0057640 | Msa0520680 | 0.806131 | 9.548011e-50 | -8.615850e-47 |
| Msa0057640 | Msa0520870 | 0.811739 | 6.020449e-51 | -8.615850e-47 |
| Msa0057640 | Msa0521680 | 0.818132 | 2.299470e-52 | -8.615850e-47 |
| Msa0057640 | Msa0523380 | 0.826403 | 2.765982e-54 | -8.615850e-47 |
| Msa0057640 | Msa0527850 | 0.805986 | 1.024374e-49 | -8.615850e-47 |
| Msa0057640 | Msa0541740 | 0.808567 | 2.906786e-50 | -8.615850e-47 |
| Msa0057640 | Msa0544410 | 0.807867 | 4.097520e-50 | -8.615850e-47 |
| Msa0057640 | Msa0550590 | 0.821693 | 3.525958e-53 | -8.615850e-47 |
| Msa0057640 | Msa0553750 | 0.814552 | 1.453797e-51 | -8.615850e-47 |
| Msa0057640 | Msa0554300 | 0.845446 | 4.041345e-59 | -8.615850e-47 |
| Msa0057640 | Msa0559100 | 0.829759 | 4.299744e-55 | -8.615850e-47 |
| Msa0057640 | Msa0561560 | 0.840103 | 1.063774e-57 | -8.615850e-47 |
| Msa0057640 | Msa0563900 | 0.827190 | 1.793609e-54 | -8.615850e-47 |
| Msa0057640 | Msa0564980 | 0.801717 | 7.893030e-49 | -8.615850e-47 |
| Msa0057640 | Msa0572830 | 0.826274 | 2.967405e-54 | -8.615850e-47 |
| Msa0057640 | Msa0577280 | 0.841128 | 5.731627e-58 | -8.615850e-47 |
| Msa0057640 | Msa0577330 | 0.843458 | 1.383645e-58 | -8.615850e-47 |
| Msa0057640 | Msa0586200 | 0.819480 | 1.136170e-52 | -8.615850e-47 |
| Msa0057640 | Msa0606100 | 0.821846 | 3.249714e-53 | -8.615850e-47 |
| Msa0057640 | Msa0607800 | 0.824088 | 9.751979e-54 | -8.615850e-47 |
| Msa0057640 | Msa0608350 | 0.814285 | 1.665161e-51 | -8.615850e-47 |
| Msa0057640 | Msa0613580 | 0.832160 | 1.107638e-55 | -8.615850e-47 |
| Msa0057640 | Msa0613630 | 0.825958 | 3.529670e-54 | -8.615850e-47 |
| Msa0057640 | Msa0615630 | 0.824106 | 9.658298e-54 | -8.615850e-47 |
| Msa0057640 | Msa0620500 | 0.848689 | 5.221857e-60 | -8.615850e-47 |
| Msa0057640 | Msa0622920 | 0.840515 | 8.302098e-58 | -8.615850e-47 |
| Msa0057640 | Msa0647050 | 0.839298 | 1.723151e-57 | -8.615850e-47 |
| Msa0057640 | Msa0647440 | 0.845735 | 3.373607e-59 | -8.615850e-47 |
| Msa0057640 | Msa0648040 | 0.833198 | 6.120292e-56 | -8.615850e-47 |
| Msa0057640 | Msa0648760 | 0.839692 | 1.360663e-57 | -8.615850e-47 |
| Msa0057640 | Msa0654740 | 0.824407 | 8.206724e-54 | -8.615850e-47 |
| Msa0057640 | Msa0657210 | 0.804379 | 2.222217e-49 | -8.615850e-47 |
| Msa0057640 | Msa0668900 | 0.802876 | 4.556186e-49 | -8.615850e-47 |
| Msa0057640 | Msa0690320 | 0.840745 | 7.226612e-58 | -8.615850e-47 |
| Msa0057640 | Msa0690740 | 0.843146 | 1.676003e-58 | -8.615850e-47 |
| Msa0057640 | Msa0691270 | 0.823050 | 1.706232e-53 | -8.615850e-47 |
| Msa0057640 | Msa0701250 | 0.808094 | 3.666582e-50 | -8.615850e-47 |
| Msa0057640 | Msa0714520 | 0.856063 | 4.144966e-62 | -8.615850e-47 |
| Msa0057640 | Msa0717900 | 0.849014 | 4.242503e-60 | -8.615850e-47 |
| Msa0057640 | Msa0720280 | 0.823547 | 1.305904e-53 | -8.615850e-47 |
| Msa0057640 | Msa0747740 | 0.814968 | 1.175995e-51 | -8.615850e-47 |
| Msa0057640 | Msa0800660 | 0.807070 | 6.048327e-50 | -8.615850e-47 |
| Msa0057640 | Msa0803140 | 0.823791 | 1.144890e-53 | -8.615850e-47 |
| Msa0057640 | Msa0805680 | 0.800591 | 1.341561e-48 | -8.615850e-47 |
| Msa0057640 | Msa0811020 | 0.801816 | 7.531158e-49 | -8.615850e-47 |
| Msa0057640 | Msa0816080 | 0.847127 | 1.407358e-59 | -8.615850e-47 |
| Msa0057640 | Msa0816230 | 0.821456 | 3.998861e-53 | -8.615850e-47 |
| Msa0057640 | Msa0837680 | 0.807113 | 5.923649e-50 | -8.615850e-47 |
| Msa0057640 | Msa0841500 | 0.817563 | 3.090724e-52 | -8.615850e-47 |
| Msa0057640 | Msa0861440 | 0.803807 | 2.922664e-49 | -8.615850e-47 |
| Msa0057640 | Msa0879920 | 0.808999 | 2.349449e-50 | -8.615850e-47 |
| Msa0057640 | Msa0897790 | 0.813760 | 2.174640e-51 | -8.615850e-47 |
| Msa0057640 | Msa0900090 | 0.803996 | 2.670404e-49 | -8.615850e-47 |
| Msa0057640 | Msa0909760 | 0.828860 | 7.108016e-55 | -8.615850e-47 |
| Msa0057640 | Msa0924430 | 0.801075 | 1.068321e-48 | -8.615850e-47 |
| Msa0057640 | Msa0926310 | 0.821597 | 3.710038e-53 | -8.615850e-47 |
| Msa0057640 | Msa0931590 | 0.802217 | 6.228723e-49 | -8.615850e-47 |
| Msa0057640 | Msa0989370 | 0.815086 | 1.106663e-51 | -8.615850e-47 |
| Msa0057640 | Msa1000780 | 0.811352 | 7.308040e-51 | -8.615850e-47 |
| Msa0057640 | Msa1002640 | 0.810211 | 1.290301e-50 | -8.615850e-47 |
| Msa0057640 | Msa1008670 | 0.833227 | 6.020271e-56 | -8.615850e-47 |
| Msa0057640 | Msa1008680 | 0.808528 | 2.962957e-50 | -8.615850e-47 |
| Msa0057640 | Msa1033920 | 0.809377 | 1.949805e-50 | -8.615850e-47 |
| Msa0057640 | Msa1035650 | 0.804211 | 2.408319e-49 | -8.615850e-47 |
| Msa0057640 | Msa1060900 | 0.804377 | 2.224577e-49 | -8.615850e-47 |
| Msa0057640 | Msa1074150 | 0.807901 | 4.031353e-50 | -8.615850e-47 |
| Msa0057640 | Msa1076020 | 0.814742 | 1.319286e-51 | -8.615850e-47 |
| Msa0057640 | Msa1078860 | 0.809733 | 1.635119e-50 | -8.615850e-47 |
| Msa0057640 | Msa1078990 | 0.814848 | 1.249704e-51 | -8.615850e-47 |
| Msa0057640 | Msa1082380 | 0.817581 | 3.061108e-52 | -8.615850e-47 |
| Msa0057640 | Msa1104220 | 0.806886 | 6.617365e-50 | -8.615850e-47 |
| Msa0057640 | Msa1106220 | 0.825672 | 4.125010e-54 | -8.615850e-47 |
| Msa0057640 | Msa1116190 | 0.800314 | 1.527828e-48 | -8.615850e-47 |
| Msa0057640 | Msa1127280 | 0.822466 | 2.333847e-53 | -8.615850e-47 |
| Msa0057640 | Msa1149450 | 0.853573 | 2.185258e-61 | -8.615850e-47 |
| Msa0057640 | Msa1159590 | 0.808361 | 3.216873e-50 | -8.615850e-47 |
| Msa0057640 | Msa1162880 | 0.828050 | 1.114849e-54 | -8.615850e-47 |
| Msa0057640 | Msa1163180 | 0.828650 | 7.990383e-55 | -8.615850e-47 |
| Msa0057640 | Msa1165480 | 0.829670 | 4.520705e-55 | -8.615850e-47 |
| Msa0057640 | Msa1169170 | 0.803274 | 3.770436e-49 | -8.615850e-47 |
| Msa0057640 | Msa1169690 | 0.811418 | 7.072332e-51 | -8.615850e-47 |
| Msa0057640 | Msa1190390 | 0.811018 | 8.634005e-51 | -8.615850e-47 |
| Msa0057640 | Msa1213830 | 0.811152 | 8.074819e-51 | -8.615850e-47 |
| Msa0057640 | Msa1214350 | 0.827662 | 1.382158e-54 | -8.615850e-47 |
| Msa0057640 | Msa1215980 | 0.849856 | 2.472097e-60 | -8.615850e-47 |
| Msa0057640 | Msa1220030 | 0.806681 | 7.309459e-50 | -8.615850e-47 |
| Msa0057640 | Msa1223390 | 0.822130 | 2.793106e-53 | -8.615850e-47 |
| Msa0057640 | Msa1240940 | 0.808779 | 2.618913e-50 | -8.615850e-47 |
| Msa0057640 | Msa1244670 | 0.800341 | 1.508313e-48 | -8.615850e-47 |
| Msa0057640 | Msa1254420 | 0.863285 | 2.776530e-64 | -8.615850e-47 |
| Msa0057640 | Msa1254540 | 0.863127 | 3.108265e-64 | -8.615850e-47 |
| Msa0057640 | Msa1261050 | 0.818454 | 1.943517e-52 | -8.615850e-47 |
| Msa0057640 | Msa1263740 | 0.816945 | 4.257137e-52 | -8.615850e-47 |
| Msa0057640 | Msa1263780 | 0.816074 | 6.668476e-52 | -8.615850e-47 |
| Msa0057640 | Msa1266300 | 0.817688 | 2.896322e-52 | -8.615850e-47 |
| Msa0057640 | Msa1267930 | 0.807814 | 4.206114e-50 | -8.615850e-47 |
| Msa0057640 | Msa1294460 | 0.846224 | 2.483842e-59 | -8.615850e-47 |
| Msa0057640 | Msa1294790 | 0.859229 | 4.779822e-63 | -8.615850e-47 |
| Msa0057640 | Msa1300460 | 0.820019 | 8.555263e-53 | -8.615850e-47 |
| Msa0057640 | Msa1301820 | 0.837953 | 3.834792e-57 | -8.615850e-47 |
| Msa0057640 | Msa1305780 | 0.819671 | 1.027683e-52 | -8.615850e-47 |
| Msa0057640 | Msa1305920 | 0.828119 | 1.073291e-54 | -8.615850e-47 |
| Msa0057640 | Msa1306790 | 0.804410 | 2.189601e-49 | -8.615850e-47 |
| Msa0057640 | Msa1321530 | 0.802979 | 4.338786e-49 | -8.615850e-47 |
| Msa0057640 | Msa1332950 | 0.839759 | 1.307656e-57 | -8.615850e-47 |
| Msa0057640 | Msa1339170 | 0.852004 | 6.134640e-61 | -8.615850e-47 |
| Msa0057640 | Msa1339230 | 0.825037 | 5.832565e-54 | -8.615850e-47 |
| Msa0057640 | Msa1361930 | 0.808351 | 3.232523e-50 | -8.615850e-47 |
| Msa0057640 | Msa1364410 | 0.802692 | 4.973726e-49 | -8.615850e-47 |
| Msa0057640 | Msa1381470 | 0.815223 | 1.032078e-51 | -8.615850e-47 |
| Msa0057640 | Msa1387500 | 0.810504 | 1.115350e-50 | -8.615850e-47 |
| Msa0057640 | Msa1399190 | 0.804744 | 1.864707e-49 | -8.615850e-47 |
| Msa0057640 | Msa1406720 | 0.811407 | 7.110557e-51 | -8.615850e-47 |
| Msa0057640 | Msa1426320 | 0.806300 | 8.794539e-50 | -8.615850e-47 |
| Msa0057640 | Msa1432520 | 0.817710 | 2.863609e-52 | -8.615850e-47 |
| Msa0057640 | Msa1434640 | 0.845082 | 5.068971e-59 | -8.615850e-47 |
| Msa0057640 | Msa1439730 | 0.801314 | 9.548229e-49 | -8.615850e-47 |
| Msa0057640 | Msa1442260 | 0.830686 | 2.553745e-55 | -8.615850e-47 |
| Msa0057640 | Msa1450190 | 0.816886 | 4.387462e-52 | -8.615850e-47 |
| Msa0057640 | Msa1457840 | 0.815361 | 9.617129e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057640 | MtrunA17_Chr1g0146731 | 97.368 | 342 | 8 | 1 | 1 | 341 | 1 | 342 | 0.0 | 689 |
| Msa0057640 | MtrunA17_Chr1g0146761 | 68.023 | 344 | 73 | 7 | 1 | 341 | 51 | 360 | 2.56e-157 | 445 |
| Msa0057640 | MtrunA17_Chr3g0129881 | 60.870 | 322 | 123 | 2 | 22 | 341 | 70 | 390 | 1.95e-135 | 390 |
| Msa0057640 | MtrunA17_Chr1g0146751 | 82.031 | 128 | 23 | 0 | 184 | 311 | 69 | 196 | 4.81e-72 | 222 |
| Msa0057640 | MtrunA17_Chr1g0146741 | 68.902 | 164 | 26 | 2 | 116 | 264 | 27 | 180 | 9.19e-68 | 211 |
| Msa0057640 | MtrunA17_Chr8g0357751 | 73.786 | 103 | 26 | 1 | 184 | 285 | 14 | 116 | 3.95e-47 | 157 |
| Msa0057640 | MtrunA17_Chr3g0129871 | 44.444 | 72 | 35 | 1 | 1 | 72 | 1 | 67 | 3.76e-16 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057640 | AT5G24330.1 | 72.642 | 318 | 84 | 3 | 26 | 341 | 33 | 349 | 1.91e-168 | 473 |
| Msa0057640 | AT5G09790.2 | 59.875 | 319 | 123 | 2 | 25 | 341 | 64 | 379 | 7.67e-140 | 401 |
| Msa0057640 | AT5G09790.1 | 60.063 | 318 | 123 | 2 | 25 | 341 | 64 | 378 | 2.93e-139 | 400 |
Find 81 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCATACATTTGGGGATTT+TGG | 0.088459 | 1_2:+13828756 | None:intergenic |
| GCTATATTGCTACGTTTATC+TGG | 0.121333 | 1_2:+13826480 | None:intergenic |
| CTTGAAGAAATCAATAATTT+TGG | 0.167292 | 1_2:+13828462 | None:intergenic |
| ATTTGCCGGAGTTGCATTTC+TGG | 0.190452 | 1_2:+13828899 | None:intergenic |
| AATATAGCACGTTTCATTAA+TGG | 0.211173 | 1_2:-13826465 | Msa0057640:CDS |
| CATTATATCTCACGCATTTC+AGG | 0.255009 | 1_2:+13825932 | None:intergenic |
| GCATCCCTTGGCGCCATTCC+AGG | 0.276840 | 1_2:+13827687 | None:intergenic |
| GAAATGAGAAGAGGAATAGT+AGG | 0.313646 | 1_2:+13829050 | None:intergenic |
| CGCAAAGAAGCAACTTAGTT+GGG | 0.323658 | 1_2:+13828875 | None:intergenic |
| CAACTTAGTTGGGGATTTGC+CGG | 0.329908 | 1_2:+13828885 | None:intergenic |
| GGGCAAAACCAAGAGGATTT+AGG | 0.342107 | 1_2:+13828796 | None:intergenic |
| CTCCTCTTCAAATCATCATT+TGG | 0.347535 | 1_2:+13827786 | None:intergenic |
| TGTAATTAAGTAGTAAGAAT+TGG | 0.361300 | 1_2:+13829076 | None:intergenic |
| GGTGAAGCCATGGTGAGATT+TGG | 0.379936 | 1_2:+13828994 | None:intergenic |
| TACAATAAGTTGTTATTGAC+AGG | 0.382876 | 1_2:+13825785 | None:intergenic |
| GTCATCATCGTTGAAGGTTG+TGG | 0.391049 | 1_2:+13828933 | None:intergenic |
| GAGAAAGCGGAGTAGTAGTT+TGG | 0.397233 | 1_2:-13827847 | Msa0057640:CDS |
| GTTGTTTATGATCCTGTAGA+AGG | 0.406850 | 1_2:-13826745 | Msa0057640:CDS |
| GTGAAGCCATGGTGAGATTT+GGG | 0.417759 | 1_2:+13828995 | None:intergenic |
| CTTCTGTACCTAAATCCTCT+TGG | 0.418430 | 1_2:-13828804 | Msa0057640:CDS |
| GAGATATAGCAAAGGGAGAA+AGG | 0.428636 | 1_2:-13825873 | Msa0057640:CDS |
| ACGTTCAAGAACAGGAGAAT+TGG | 0.452094 | 1_2:+13827665 | None:intergenic |
| ATTCCTCCACGTTCAAGAAC+AGG | 0.452190 | 1_2:+13827657 | None:intergenic |
| TCGCAAAGAAGCAACTTAGT+TGG | 0.454512 | 1_2:+13828874 | None:intergenic |
| AAAGCGGAGTAGTAGTTTGG+TGG | 0.462327 | 1_2:-13827844 | Msa0057640:CDS |
| CTTTGCGACAATTGCGACAA+CGG | 0.472963 | 1_2:-13828859 | Msa0057640:CDS |
| CGCGTTGACTGCTACTAAAA+CGG | 0.476912 | 1_2:-13827736 | Msa0057640:CDS |
| TAGGTGTGAGGCAGAAGAGA+TGG | 0.477113 | 1_2:+13828833 | None:intergenic |
| CTATATTGCTACGTTTATCT+GGG | 0.481139 | 1_2:+13826481 | None:intergenic |
| TGCGTGAGATATAATGTTGA+TGG | 0.484685 | 1_2:-13825925 | Msa0057640:CDS |
| ACAATAATAACAGAATATGT+TGG | 0.490743 | 1_2:-13826600 | Msa0057640:CDS |
| CAAGAGGATTTAGGTACAGA+AGG | 0.492170 | 1_2:+13828805 | None:intergenic |
| TAACTTGTGCAGAAGTATGA+TGG | 0.493269 | 1_2:-13826794 | Msa0057640:CDS |
| AAATGAGAAGAGGAATAGTA+GGG | 0.499503 | 1_2:+13829051 | None:intergenic |
| TTTGGGATTTGAGAATGAAT+CGG | 0.499862 | 1_2:+13829012 | None:intergenic |
| TTAGGTACAGAAGGGAGGAT+AGG | 0.500711 | 1_2:+13828814 | None:intergenic |
| TTCTAATCCTTCACAGTCAC+TGG | 0.505311 | 1_2:-13826511 | Msa0057640:CDS |
| GACGTCGTCATCATCGTTGA+AGG | 0.512130 | 1_2:+13828927 | None:intergenic |
| GCATCTAAGATTCTGAATCA+TGG | 0.512650 | 1_2:-13828421 | Msa0057640:intron |
| ATAAGTACTTACCCTTCTAC+AGG | 0.515050 | 1_2:+13826733 | None:intergenic |
| ATTAGAACAGATGGCGTCGT+TGG | 0.518768 | 1_2:-13827763 | Msa0057640:CDS |
| GCAAATAGAGATATAGCAAA+GGG | 0.521433 | 1_2:-13825880 | Msa0057640:CDS |
| ATTCAAAGAAGAAGAGAAAG+CGG | 0.540362 | 1_2:-13827860 | Msa0057640:CDS |
| ACAGGAGAATTGGCATCCCT+TGG | 0.541184 | 1_2:+13827675 | None:intergenic |
| TCTTGAACGTGGAGGAATGC+AGG | 0.541405 | 1_2:-13827652 | Msa0057640:intron |
| AATTAGACAAAATGTTCAGT+TGG | 0.544685 | 1_2:+13825814 | None:intergenic |
| AAGAATCGGGAATATGATGA+TGG | 0.544853 | 1_2:-13826561 | Msa0057640:CDS |
| AGGAGAATGTCCGCCCCTCA+TGG | 0.545962 | 1_2:-13826767 | Msa0057640:CDS |
| TGCAGAAGTATGATGGAAAG+AGG | 0.546783 | 1_2:-13826787 | Msa0057640:CDS |
| TGGGGTTGTGAGAGCAGGAA+GGG | 0.547853 | 1_2:+13828776 | None:intergenic |
| TAAGTAGTAAGAATTGGAAG+AGG | 0.548910 | 1_2:+13829082 | None:intergenic |
| AAGAAATGAGAAATGAGAAG+AGG | 0.549396 | 1_2:+13829041 | None:intergenic |
| AATGAGCTTACATACATGCC+TGG | 0.552496 | 1_2:-13827705 | Msa0057640:CDS |
| CATGCCTGGAATGGCGCCAA+GGG | 0.555292 | 1_2:-13827691 | Msa0057640:CDS |
| AATTCTCCTGTTCTTGAACG+TGG | 0.561001 | 1_2:-13827663 | Msa0057640:CDS |
| TGCAAATAGAGATATAGCAA+AGG | 0.569319 | 1_2:-13825881 | Msa0057640:CDS |
| GGAATTCTTCTTCGACGAAG+TGG | 0.577490 | 1_2:+13828973 | None:intergenic |
| ACATGCCTGGAATGGCGCCA+AGG | 0.581749 | 1_2:-13827692 | Msa0057640:CDS |
| GCTTACATACATGCCTGGAA+TGG | 0.584838 | 1_2:-13827700 | Msa0057640:CDS |
| TCGACGAAGTGGTGAAGCCA+TGG | 0.587847 | 1_2:+13828984 | None:intergenic |
| CAGAATCTTAGATGCATCAA+CGG | 0.589395 | 1_2:+13828429 | None:intergenic |
| TGCCAAATGATGATTTGAAG+AGG | 0.592036 | 1_2:-13827788 | Msa0057640:CDS |
| GAAGAGGAGATTAGAACAGA+TGG | 0.593117 | 1_2:-13827772 | Msa0057640:CDS |
| TGAAAGGATGCATACATTTG+GGG | 0.604501 | 1_2:+13828749 | None:intergenic |
| TTGGGGTTGTGAGAGCAGGA+AGG | 0.612150 | 1_2:+13828775 | None:intergenic |
| TTGTTTATGATCCTGTAGAA+GGG | 0.614616 | 1_2:-13826744 | Msa0057640:intron |
| TCTGCACAAGTTAAGAGTCT+CGG | 0.617054 | 1_2:+13826804 | None:intergenic |
| GCAAAGAAGCAACTTAGTTG+GGG | 0.617673 | 1_2:+13828876 | None:intergenic |
| AAGAGGATTTAGGTACAGAA+GGG | 0.621884 | 1_2:+13828806 | None:intergenic |
| GTTTGCCAGAAATGCAACTC+CGG | 0.639299 | 1_2:-13828904 | Msa0057640:CDS |
| AGGATTTAGGTACAGAAGGG+AGG | 0.647659 | 1_2:+13828809 | None:intergenic |
| TCTCCTGTTCTTGAACGTGG+AGG | 0.653986 | 1_2:-13827660 | Msa0057640:CDS |
| CAGAAGGGAGGATAGGTGTG+AGG | 0.654698 | 1_2:+13828821 | None:intergenic |
| TCAAATCCCAAATCTCACCA+TGG | 0.657568 | 1_2:-13829001 | Msa0057640:exon |
| AGGTTGTATTATGACTACAA+TGG | 0.669535 | 1_2:-13825853 | Msa0057640:CDS |
| GGATCATAAACAACCATGAG+GGG | 0.675550 | 1_2:+13826754 | None:intergenic |
| AGGATCATAAACAACCATGA+GGG | 0.678750 | 1_2:+13826753 | None:intergenic |
| TCATAAACAACCATGAGGGG+CGG | 0.687468 | 1_2:+13826757 | None:intergenic |
| CAGGATCATAAACAACCATG+AGG | 0.703912 | 1_2:+13826752 | None:intergenic |
| GCAGGAAGGGCAAAACCAAG+AGG | 0.707902 | 1_2:+13828789 | None:intergenic |
| CAGATGACCAGTGACTGTGA+AGG | 0.718767 | 1_2:+13826504 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTTCTTTTTTTTGT+AGG | - | chr1_2:13828221-13828240 | Msa0057640:intron | 10.0% |
| !! | AAAAAAGAAAATTAAAAGTC+AGG | + | chr1_2:13828217-13828236 | None:intergenic | 15.0% |
| !!! | TATTATTGTCAAATCTTTTA+TGG | + | chr1_2:13828269-13828288 | None:intergenic | 15.0% |
| !! | AATATAATATAGTGAGAAAT+TGG | - | chr1_2:13828522-13828541 | Msa0057640:intron | 15.0% |
| !! | TGTAATTAAGTAGTAAGAAT+TGG | + | chr1_2:13825807-13825826 | None:intergenic | 20.0% |
| !! | ATGAAATGAAATCAAATGAA+AGG | + | chr1_2:13826150-13826169 | None:intergenic | 20.0% |
| !!! | CTTGAAGAAATCAATAATTT+TGG | + | chr1_2:13826421-13826440 | None:intergenic | 20.0% |
| !! | TAATGTTTAGAGAATTTGAT+TGG | - | chr1_2:13826521-13826540 | Msa0057640:CDS | 20.0% |
| !!! | TTAGGTATTATATTGTTGTT+AGG | - | chr1_2:13827280-13827299 | Msa0057640:intron | 20.0% |
| !! | TTAATTGAAAAATTCTACTG+TGG | - | chr1_2:13827381-13827400 | Msa0057640:intron | 20.0% |
| !!! | GTTTGTATATATTTTTTCTC+AGG | - | chr1_2:13828035-13828054 | Msa0057640:intron | 20.0% |
| !! | ACAATAATAACAGAATATGT+TGG | - | chr1_2:13828280-13828299 | Msa0057640:intron | 20.0% |
| !! | CAGAGAATAAAATTTGAAAA+AGG | + | chr1_2:13828470-13828489 | None:intergenic | 20.0% |
| !! | TTCATCTTAAAGAATGTTAT+CGG | - | chr1_2:13828549-13828568 | Msa0057640:intron | 20.0% |
| ! | TTTAATAACGTGATTAGATC+TGG | - | chr1_2:13826298-13826317 | Msa0057640:intron | 25.0% |
| !!! | ATAATTTTGGTTTGTACAAG+AGG | + | chr1_2:13826408-13826427 | None:intergenic | 25.0% |
| !! | TATGTTTTCACAAGCTATTA+TGG | - | chr1_2:13826692-13826711 | Msa0057640:intron | 25.0% |
| !! | ATAACTTTTGTAAGACTGTT+TGG | + | chr1_2:13826914-13826933 | None:intergenic | 25.0% |
| ! | AAAAAAGAAAAGGAAGTTGT+TGG | - | chr1_2:13827063-13827082 | Msa0057640:intron | 25.0% |
| !!! | CTTAATTGAGTTTGTTAGTT+AGG | - | chr1_2:13827262-13827281 | Msa0057640:intron | 25.0% |
| !!! | TATTGTTGTTAGGATACTTT+TGG | - | chr1_2:13827290-13827309 | Msa0057640:intron | 25.0% |
| ! | TGCAATACTGAAGTATAAAA+TGG | - | chr1_2:13827862-13827881 | Msa0057640:CDS | 25.0% |
| !!! | ATGTAGACTTTTTGAAGAAT+CGG | - | chr1_2:13828305-13828324 | Msa0057640:intron | 25.0% |
| ! | AATATAGCACGTTTCATTAA+TGG | - | chr1_2:13828415-13828434 | Msa0057640:intron | 25.0% |
| ! | TTGAAAAAGGAAGAAACATA+CGG | + | chr1_2:13828457-13828476 | None:intergenic | 25.0% |
| !! | ATTTTATTCTCTGCATATGT+AGG | - | chr1_2:13828477-13828496 | Msa0057640:CDS | 25.0% |
| !!! | TGTTTTGTGTGTTTTAGAAA+GGG | - | chr1_2:13828606-13828625 | Msa0057640:intron | 25.0% |
| ! | TAATTATCAATTGCTACTAC+TGG | + | chr1_2:13828644-13828663 | None:intergenic | 25.0% |
| ! | AATTAGACAAAATGTTCAGT+TGG | + | chr1_2:13829069-13829088 | None:intergenic | 25.0% |
| TAAGTAGTAAGAATTGGAAG+AGG | + | chr1_2:13825801-13825820 | None:intergenic | 30.0% | |
| AAATGAGAAGAGGAATAGTA+GGG | + | chr1_2:13825832-13825851 | None:intergenic | 30.0% | |
| AAGAAATGAGAAATGAGAAG+AGG | + | chr1_2:13825842-13825861 | None:intergenic | 30.0% | |
| ! | TTTGGGATTTGAGAATGAAT+CGG | + | chr1_2:13825871-13825890 | None:intergenic | 30.0% |
| !!! | AAGGTTGTGGATTGTTTTTT+GGG | + | chr1_2:13825937-13825956 | None:intergenic | 30.0% |
| ATGAAAGGATGCATACATTT+GGG | + | chr1_2:13826135-13826154 | None:intergenic | 30.0% | |
| AATGAAAGGATGCATACATT+TGG | + | chr1_2:13826136-13826155 | None:intergenic | 30.0% | |
| CATTTCAATACGTCAATGTT+TGG | - | chr1_2:13826167-13826186 | Msa0057640:intron | 30.0% | |
| GTTTAGAGAATTTGATTGGA+TGG | - | chr1_2:13826525-13826544 | Msa0057640:CDS | 30.0% | |
| !!! | GCTGTTTTTACAAGTTATTG+TGG | - | chr1_2:13826583-13826602 | Msa0057640:CDS | 30.0% |
| !! | CTATTTTTCACAACCTATTG+TGG | - | chr1_2:13826763-13826782 | Msa0057640:CDS | 30.0% |
| !! | GAAGTGTGTGTTTTAAATTG+TGG | - | chr1_2:13826990-13827009 | Msa0057640:intron | 30.0% |
| ATTCAAAGAAGAAGAGAAAG+CGG | - | chr1_2:13827020-13827039 | Msa0057640:intron | 30.0% | |
| TGGTGGTTTCAAAAAAGAAA+AGG | - | chr1_2:13827053-13827072 | Msa0057640:intron | 30.0% | |
| TGTTGAGTTATGTTTGTATG+AGG | - | chr1_2:13827353-13827372 | Msa0057640:intron | 30.0% | |
| TGAGACATTGAATTGATTGT+TGG | - | chr1_2:13827507-13827526 | Msa0057640:intron | 30.0% | |
| !! | TTGTTTTGTTGAACTGATAC+TGG | - | chr1_2:13827595-13827614 | Msa0057640:intron | 30.0% |
| ! | TTAGGTTGTCAACACTAATT+AGG | - | chr1_2:13827618-13827637 | Msa0057640:intron | 30.0% |
| !! | AGTTTATACTTTTTGAGAGC+TGG | - | chr1_2:13827676-13827695 | Msa0057640:CDS | 30.0% |
| ! | ACTTTGTTGCCTTTATTTCT+AGG | + | chr1_2:13827841-13827860 | None:intergenic | 30.0% |
| !! | CTACAAACTAGTTTGGATTT+TGG | - | chr1_2:13827890-13827909 | Msa0057640:intron | 30.0% |
| TTGTTTATGATCCTGTAGAA+GGG | - | chr1_2:13828136-13828155 | Msa0057640:intron | 30.0% | |
| !! | TGTAGACTTTTTGAAGAATC+GGG | - | chr1_2:13828306-13828325 | Msa0057640:intron | 30.0% |
| CTATATTGCTACGTTTATCT+GGG | + | chr1_2:13828402-13828421 | None:intergenic | 30.0% | |
| !! | CTTTCTAAAACACACAAAAC+AGG | + | chr1_2:13828607-13828626 | None:intergenic | 30.0% |
| !!! | CTGTTTTGTGTGTTTTAGAA+AGG | - | chr1_2:13828605-13828624 | Msa0057640:intron | 30.0% |
| !!! | GTTTTGTGTGTTTTAGAAAG+GGG | - | chr1_2:13828607-13828626 | Msa0057640:intron | 30.0% |
| CTCAAGTTAAACAGATTTCA+GGG | + | chr1_2:13828700-13828719 | None:intergenic | 30.0% | |
| ACTCAAGTTAAACAGATTTC+AGG | + | chr1_2:13828701-13828720 | None:intergenic | 30.0% | |
| !! | GTTTAGTGCAAATTGACTTT+TGG | - | chr1_2:13828723-13828742 | Msa0057640:intron | 30.0% |
| CATCTTAGCATTACATGAAA+AGG | + | chr1_2:13828781-13828800 | None:intergenic | 30.0% | |
| !!! | TTCTTGTTTTTATGCAGTGA+AGG | - | chr1_2:13828910-13828929 | Msa0057640:CDS | 30.0% |
| TGCAAATAGAGATATAGCAA+AGG | - | chr1_2:13828999-13829018 | Msa0057640:exon | 30.0% | |
| GCAAATAGAGATATAGCAAA+GGG | - | chr1_2:13829000-13829019 | Msa0057640:exon | 30.0% | |
| AGGTTGTATTATGACTACAA+TGG | - | chr1_2:13829027-13829046 | Msa0057640:five_prime_UTR | 30.0% | |
| GAAATGAGAAGAGGAATAGT+AGG | + | chr1_2:13825833-13825852 | None:intergenic | 35.0% | |
| !!! | GAAGGTTGTGGATTGTTTTT+TGG | + | chr1_2:13825938-13825957 | None:intergenic | 35.0% |
| AAGAGGATTTAGGTACAGAA+GGG | + | chr1_2:13826077-13826096 | None:intergenic | 35.0% | |
| ! | TGCATACATTTGGGGATTTT+GGG | + | chr1_2:13826126-13826145 | None:intergenic | 35.0% |
| ! | ATGCATACATTTGGGGATTT+TGG | + | chr1_2:13826127-13826146 | None:intergenic | 35.0% |
| TGAAAGGATGCATACATTTG+GGG | + | chr1_2:13826134-13826153 | None:intergenic | 35.0% | |
| TCTATTGACGTTATGCTGTT+TGG | - | chr1_2:13826369-13826388 | Msa0057640:intron | 35.0% | |
| ! | CTATTGACGTTATGCTGTTT+GGG | - | chr1_2:13826370-13826389 | Msa0057640:intron | 35.0% |
| CAGAATCTTAGATGCATCAA+CGG | + | chr1_2:13826454-13826473 | None:intergenic | 35.0% | |
| ! | GCATCTAAGATTCTGAATCA+TGG | - | chr1_2:13826459-13826478 | Msa0057640:CDS | 35.0% |
| GAGAATTTGATTGGATGGAT+TGG | - | chr1_2:13826530-13826549 | Msa0057640:CDS | 35.0% | |
| !! | TTTGATTGGATGGATTGGTT+TGG | - | chr1_2:13826535-13826554 | Msa0057640:CDS | 35.0% |
| !! | TTGATTGGATGGATTGGTTT+GGG | - | chr1_2:13826536-13826555 | Msa0057640:CDS | 35.0% |
| !! | GCTGTTTTCATAAGCTAATG+TGG | - | chr1_2:13826652-13826671 | Msa0057640:intron | 35.0% |
| ! | TAGCTTGTGAAAACAGTTGA+TGG | + | chr1_2:13826819-13826838 | None:intergenic | 35.0% |
| TGCCAAATGATGATTTGAAG+AGG | - | chr1_2:13827092-13827111 | Msa0057640:intron | 35.0% | |
| CTCCTCTTCAAATCATCATT+TGG | + | chr1_2:13827097-13827116 | None:intergenic | 35.0% | |
| GACATTGAATTGATTGTTGG+TGG | - | chr1_2:13827510-13827529 | Msa0057640:intron | 35.0% | |
| ! | TTGTTGAACTGATACTGGTT+AGG | - | chr1_2:13827600-13827619 | Msa0057640:intron | 35.0% |
| TCGTCTTCATTTGTACAACT+AGG | + | chr1_2:13827651-13827670 | None:intergenic | 35.0% | |
| !! | TTATACTTTTTGAGAGCTGG+TGG | - | chr1_2:13827679-13827698 | Msa0057640:CDS | 35.0% |
| TAATACAAGCGCAATGTCTT+TGG | - | chr1_2:13827729-13827748 | Msa0057640:CDS | 35.0% | |
| TCTCAACTTATGCTCAATGT+AGG | - | chr1_2:13827754-13827773 | Msa0057640:CDS | 35.0% | |
| GCAGTGTTACCTAGAAATAA+AGG | - | chr1_2:13827829-13827848 | Msa0057640:CDS | 35.0% | |
| CTGCACTATTTGTCATGATT+TGG | - | chr1_2:13827917-13827936 | Msa0057640:intron | 35.0% | |
| GCTCTGATAATCTGATTAAG+TGG | + | chr1_2:13827967-13827986 | None:intergenic | 35.0% | |
| ! | TAACTTGTGCAGAAGTATGA+TGG | - | chr1_2:13828086-13828105 | Msa0057640:intron | 35.0% |
| AGGATCATAAACAACCATGA+GGG | + | chr1_2:13828130-13828149 | None:intergenic | 35.0% | |
| GTTGTTTATGATCCTGTAGA+AGG | - | chr1_2:13828135-13828154 | Msa0057640:intron | 35.0% | |
| ATAAGTACTTACCCTTCTAC+AGG | + | chr1_2:13828150-13828169 | None:intergenic | 35.0% | |
| AAGAATCGGGAATATGATGA+TGG | - | chr1_2:13828319-13828338 | Msa0057640:intron | 35.0% | |
| GCTATATTGCTACGTTTATC+TGG | + | chr1_2:13828403-13828422 | None:intergenic | 35.0% | |
| CATTATATCTCACGCATTTC+AGG | + | chr1_2:13828951-13828970 | None:intergenic | 35.0% | |
| TGCGTGAGATATAATGTTGA+TGG | - | chr1_2:13828955-13828974 | Msa0057640:CDS | 35.0% | |
| TCAAATCCCAAATCTCACCA+TGG | - | chr1_2:13825879-13825898 | Msa0057640:CDS | 40.0% | |
| GCAAAGAAGCAACTTAGTTG+GGG | + | chr1_2:13826007-13826026 | None:intergenic | 40.0% | |
| CGCAAAGAAGCAACTTAGTT+GGG | + | chr1_2:13826008-13826027 | None:intergenic | 40.0% | |
| TCGCAAAGAAGCAACTTAGT+TGG | + | chr1_2:13826009-13826028 | None:intergenic | 40.0% | |
| CAAGAGGATTTAGGTACAGA+AGG | + | chr1_2:13826078-13826097 | None:intergenic | 40.0% | |
| CTTCTGTACCTAAATCCTCT+TGG | - | chr1_2:13826076-13826095 | Msa0057640:intron | 40.0% | |
| ! | GCATACATTTGGGGATTTTG+GGG | + | chr1_2:13826125-13826144 | None:intergenic | 40.0% |
| TGGTATCACAGTGAGTTTGT+CGG | - | chr1_2:13826187-13826206 | Msa0057640:intron | 40.0% | |
| ACCAAACATTCACAACACCT+AGG | - | chr1_2:13826233-13826252 | Msa0057640:intron | 40.0% | |
| CCAAACATTCACAACACCTA+GGG | - | chr1_2:13826234-13826253 | Msa0057640:intron | 40.0% | |
| ! | ATTAGAGTATTCACGACCCT+AGG | + | chr1_2:13826253-13826272 | None:intergenic | 40.0% |
| TTTCACATGCTCTCCACAAT+AGG | + | chr1_2:13826779-13826798 | None:intergenic | 40.0% | |
| GAAGAGGAGATTAGAACAGA+TGG | - | chr1_2:13827108-13827127 | Msa0057640:intron | 40.0% | |
| AATGAGCTTACATACATGCC+TGG | - | chr1_2:13827175-13827194 | Msa0057640:intron | 40.0% | |
| ACGTTCAAGAACAGGAGAAT+TGG | + | chr1_2:13827218-13827237 | None:intergenic | 40.0% | |
| AATTCTCCTGTTCTTGAACG+TGG | - | chr1_2:13827217-13827236 | Msa0057640:intron | 40.0% | |
| GGTCTGTCTACAAACTAGTT+TGG | - | chr1_2:13827883-13827902 | Msa0057640:intron | 40.0% | |
| TCTGCACAAGTTAAGAGTCT+CGG | + | chr1_2:13828079-13828098 | None:intergenic | 40.0% | |
| ! | TGCAGAAGTATGATGGAAAG+AGG | - | chr1_2:13828093-13828112 | Msa0057640:intron | 40.0% |
| GGATCATAAACAACCATGAG+GGG | + | chr1_2:13828129-13828148 | None:intergenic | 40.0% | |
| CAGGATCATAAACAACCATG+AGG | + | chr1_2:13828131-13828150 | None:intergenic | 40.0% | |
| TTCTAATCCTTCACAGTCAC+TGG | - | chr1_2:13828369-13828388 | Msa0057640:intron | 40.0% | |
| GAATAGCACTAATATCCACC+TGG | - | chr1_2:13828755-13828774 | Msa0057640:intron | 40.0% | |
| TAGCATTACATGAAAAGGCC+AGG | + | chr1_2:13828776-13828795 | None:intergenic | 40.0% | |
| GAGATATAGCAAAGGGAGAA+AGG | - | chr1_2:13829007-13829026 | Msa0057640:five_prime_UTR | 40.0% | |
| GTGAAGCCATGGTGAGATTT+GGG | + | chr1_2:13825888-13825907 | None:intergenic | 45.0% | |
| GGAATTCTTCTTCGACGAAG+TGG | + | chr1_2:13825910-13825929 | None:intergenic | 45.0% | |
| !!! | GTGGATTGTTTTTTGGGAGC+TGG | + | chr1_2:13825931-13825950 | None:intergenic | 45.0% |
| GTCATCATCGTTGAAGGTTG+TGG | + | chr1_2:13825950-13825969 | None:intergenic | 45.0% | |
| GTTTGCCAGAAATGCAACTC+CGG | - | chr1_2:13825976-13825995 | Msa0057640:intron | 45.0% | |
| ATTTGCCGGAGTTGCATTTC+TGG | + | chr1_2:13825984-13826003 | None:intergenic | 45.0% | |
| CAACTTAGTTGGGGATTTGC+CGG | + | chr1_2:13825998-13826017 | None:intergenic | 45.0% | |
| CTTTGCGACAATTGCGACAA+CGG | - | chr1_2:13826021-13826040 | Msa0057640:intron | 45.0% | |
| TTAGGTACAGAAGGGAGGAT+AGG | + | chr1_2:13826069-13826088 | None:intergenic | 45.0% | |
| AGGATTTAGGTACAGAAGGG+AGG | + | chr1_2:13826074-13826093 | None:intergenic | 45.0% | |
| GGGCAAAACCAAGAGGATTT+AGG | + | chr1_2:13826087-13826106 | None:intergenic | 45.0% | |
| ! | CCCTAGGTGTTGTGAATGTT+TGG | + | chr1_2:13826237-13826256 | None:intergenic | 45.0% |
| GAGAAAGCGGAGTAGTAGTT+TGG | - | chr1_2:13827033-13827052 | Msa0057640:intron | 45.0% | |
| AAAGCGGAGTAGTAGTTTGG+TGG | - | chr1_2:13827036-13827055 | Msa0057640:intron | 45.0% | |
| ATTAGAACAGATGGCGTCGT+TGG | - | chr1_2:13827117-13827136 | Msa0057640:intron | 45.0% | |
| !! | CGTTTTAGTAGCAGTCAACG+CGG | + | chr1_2:13827146-13827165 | None:intergenic | 45.0% |
| !! | CGCGTTGACTGCTACTAAAA+CGG | - | chr1_2:13827144-13827163 | Msa0057640:intron | 45.0% |
| GCTTACATACATGCCTGGAA+TGG | - | chr1_2:13827180-13827199 | Msa0057640:intron | 45.0% | |
| ATTCCTCCACGTTCAAGAAC+AGG | + | chr1_2:13827226-13827245 | None:intergenic | 45.0% | |
| TTGCATCTCAGTGTGCATGT+TGG | - | chr1_2:13827322-13827341 | Msa0057640:intron | 45.0% | |
| ! | CAGTGTGCATGTTGGTTGTT+TGG | - | chr1_2:13827330-13827349 | Msa0057640:intron | 45.0% |
| ATGTTGCCTCTTTGTCGTCA+TGG | - | chr1_2:13827475-13827494 | Msa0057640:intron | 45.0% | |
| TCTTAGCCATGACGACAAAG+AGG | + | chr1_2:13827484-13827503 | None:intergenic | 45.0% | |
| TCTAGGTAACACTGCGTACT+AGG | + | chr1_2:13827824-13827843 | None:intergenic | 45.0% | |
| TCATAAACAACCATGAGGGG+CGG | + | chr1_2:13828126-13828145 | None:intergenic | 45.0% | |
| CATTACATGAAAAGGCCAGG+TGG | + | chr1_2:13828773-13828792 | None:intergenic | 45.0% | |
| !! | ATATTATATTATTGTATTTA+GGG | + | chr1_2:13828512-13828531 | None:intergenic | 5.0% |
| !! | TATATTATATTATTGTATTT+AGG | + | chr1_2:13828513-13828532 | None:intergenic | 5.0% |
| GGTGAAGCCATGGTGAGATT+TGG | + | chr1_2:13825889-13825908 | None:intergenic | 50.0% | |
| GACGTCGTCATCATCGTTGA+AGG | + | chr1_2:13825956-13825975 | None:intergenic | 50.0% | |
| TAGGTGTGAGGCAGAAGAGA+TGG | + | chr1_2:13826050-13826069 | None:intergenic | 50.0% | |
| !!! | GATTTTGGGGTTGTGAGAGC+AGG | + | chr1_2:13826112-13826131 | None:intergenic | 50.0% |
| ACAGGAGAATTGGCATCCCT+TGG | + | chr1_2:13827208-13827227 | None:intergenic | 50.0% | |
| TCTCCTGTTCTTGAACGTGG+AGG | - | chr1_2:13827220-13827239 | Msa0057640:intron | 50.0% | |
| TCTTGAACGTGGAGGAATGC+AGG | - | chr1_2:13827228-13827247 | Msa0057640:intron | 50.0% | |
| CAGATGACCAGTGACTGTGA+AGG | + | chr1_2:13828379-13828398 | None:intergenic | 50.0% | |
| TCGACGAAGTGGTGAAGCCA+TGG | + | chr1_2:13825899-13825918 | None:intergenic | 55.0% | |
| CAGAAGGGAGGATAGGTGTG+AGG | + | chr1_2:13826062-13826081 | None:intergenic | 55.0% | |
| GCAGGAAGGGCAAAACCAAG+AGG | + | chr1_2:13826094-13826113 | None:intergenic | 55.0% | |
| TGGGGTTGTGAGAGCAGGAA+GGG | + | chr1_2:13826107-13826126 | None:intergenic | 55.0% | |
| TTGGGGTTGTGAGAGCAGGA+AGG | + | chr1_2:13826108-13826127 | None:intergenic | 55.0% | |
| ACATGCCTGGAATGGCGCCA+AGG | - | chr1_2:13827188-13827207 | Msa0057640:intron | 60.0% | |
| CATGCCTGGAATGGCGCCAA+GGG | - | chr1_2:13827189-13827208 | Msa0057640:intron | 60.0% | |
| AGGAGAATGTCCGCCCCTCA+TGG | - | chr1_2:13828113-13828132 | Msa0057640:intron | 60.0% | |
| GCATCCCTTGGCGCCATTCC+AGG | + | chr1_2:13827196-13827215 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 13825797 | 13829105 | 13825797 | ID=Msa0057640;Name=Msa0057640 |
| chr1_2 | mRNA | 13825797 | 13829105 | 13825797 | ID=Msa0057640-mRNA-1;Parent=Msa0057640;Name=Msa0057640-mRNA-1;_AED=0.38;_eAED=0.38;_QI=101|1|1|1|1|1|6|19|341 |
| chr1_2 | exon | 13825797 | 13825975 | 13825797 | ID=Msa0057640-mRNA-1:exon:5505;Parent=Msa0057640-mRNA-1 |
| chr1_2 | exon | 13826447 | 13826659 | 13826447 | ID=Msa0057640-mRNA-1:exon:5504;Parent=Msa0057640-mRNA-1 |
| chr1_2 | exon | 13826745 | 13826845 | 13826745 | ID=Msa0057640-mRNA-1:exon:5503;Parent=Msa0057640-mRNA-1 |
| chr1_2 | exon | 13827653 | 13827882 | 13827653 | ID=Msa0057640-mRNA-1:exon:5502;Parent=Msa0057640-mRNA-1 |
| chr1_2 | exon | 13828422 | 13828502 | 13828422 | ID=Msa0057640-mRNA-1:exon:5501;Parent=Msa0057640-mRNA-1 |
| chr1_2 | exon | 13828764 | 13829105 | 13828764 | ID=Msa0057640-mRNA-1:exon:5500;Parent=Msa0057640-mRNA-1 |
| chr1_2 | five_prime_UTR | 13829005 | 13829105 | 13829005 | ID=Msa0057640-mRNA-1:five_prime_utr;Parent=Msa0057640-mRNA-1 |
| chr1_2 | CDS | 13828764 | 13829004 | 13828764 | ID=Msa0057640-mRNA-1:cds;Parent=Msa0057640-mRNA-1 |
| chr1_2 | CDS | 13828422 | 13828502 | 13828422 | ID=Msa0057640-mRNA-1:cds;Parent=Msa0057640-mRNA-1 |
| chr1_2 | CDS | 13827653 | 13827882 | 13827653 | ID=Msa0057640-mRNA-1:cds;Parent=Msa0057640-mRNA-1 |
| chr1_2 | CDS | 13826745 | 13826845 | 13826745 | ID=Msa0057640-mRNA-1:cds;Parent=Msa0057640-mRNA-1 |
| chr1_2 | CDS | 13826447 | 13826659 | 13826447 | ID=Msa0057640-mRNA-1:cds;Parent=Msa0057640-mRNA-1 |
| chr1_2 | CDS | 13825816 | 13825975 | 13825816 | ID=Msa0057640-mRNA-1:cds;Parent=Msa0057640-mRNA-1 |
| chr1_2 | three_prime_UTR | 13825797 | 13825815 | 13825797 | ID=Msa0057640-mRNA-1:three_prime_utr;Parent=Msa0057640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
