Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160160 | XP_003588480.1 | 80.702 | 342 | 8 | 3 | 1 | 284 | 1 | 342 | 0.0 | 544 |
| Msa0160160 | XP_003588480.1 | 83.636 | 55 | 9 | 0 | 284 | 338 | 186 | 240 | 3.80e-19 | 99.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160160 | sp|Q9FNE9|ATXR6_ARATH | 61.392 | 316 | 64 | 3 | 27 | 284 | 34 | 349 | 2.26e-131 | 384 |
| Msa0160160 | sp|Q9FNE9|ATXR6_ARATH | 66.667 | 60 | 20 | 0 | 284 | 343 | 192 | 251 | 6.14e-17 | 85.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160160 | G7I3E6 | 80.702 | 342 | 8 | 3 | 1 | 284 | 1 | 342 | 0.0 | 544 |
| Msa0160160 | G7I3E6 | 83.636 | 55 | 9 | 0 | 284 | 338 | 186 | 240 | 1.81e-19 | 99.8 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0160160 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005020 | Msa0160160 | 0.830751 | 2.462204e-55 | -8.615850e-47 |
| Msa0016040 | Msa0160160 | 0.807877 | 4.077349e-50 | -8.615850e-47 |
| Msa0016530 | Msa0160160 | 0.821060 | 4.934999e-53 | -8.615850e-47 |
| Msa0019930 | Msa0160160 | 0.822234 | 2.641342e-53 | -8.615850e-47 |
| Msa0020540 | Msa0160160 | 0.800394 | 1.471015e-48 | -8.615850e-47 |
| Msa0030070 | Msa0160160 | 0.814300 | 1.652908e-51 | -8.615850e-47 |
| Msa0032970 | Msa0160160 | 0.816883 | 4.395198e-52 | -8.615850e-47 |
| Msa0032980 | Msa0160160 | 0.836965 | 6.866783e-57 | -8.615850e-47 |
| Msa0037740 | Msa0160160 | 0.812390 | 4.342562e-51 | -8.615850e-47 |
| Msa0053070 | Msa0160160 | 0.836796 | 7.585636e-57 | -8.615850e-47 |
| Msa0056180 | Msa0160160 | 0.804308 | 2.299229e-49 | -8.615850e-47 |
| Msa0057640 | Msa0160160 | 0.891904 | 2.592364e-74 | -8.615850e-47 |
| Msa0062340 | Msa0160160 | 0.828365 | 9.362908e-55 | -8.615850e-47 |
| Msa0067380 | Msa0160160 | 0.815439 | 9.238477e-52 | -8.615850e-47 |
| Msa0068150 | Msa0160160 | 0.800500 | 1.399603e-48 | -8.615850e-47 |
| Msa0090440 | Msa0160160 | 0.802906 | 4.492318e-49 | -8.615850e-47 |
| Msa0091350 | Msa0160160 | 0.849344 | 3.433791e-60 | -8.615850e-47 |
| Msa0093860 | Msa0160160 | 0.850343 | 1.805373e-60 | -8.615850e-47 |
| Msa0098410 | Msa0160160 | 0.858223 | 9.545506e-63 | -8.615850e-47 |
| Msa0103200 | Msa0160160 | 0.845616 | 3.634150e-59 | -8.615850e-47 |
| Msa0106630 | Msa0160160 | 0.838153 | 3.406540e-57 | -8.615850e-47 |
| Msa0110200 | Msa0160160 | 0.803909 | 2.783280e-49 | -8.615850e-47 |
| Msa0115550 | Msa0160160 | 0.828419 | 9.084600e-55 | -8.615850e-47 |
| Msa0123320 | Msa0160160 | 0.817244 | 3.646960e-52 | -8.615850e-47 |
| Msa0125590 | Msa0160160 | 0.828139 | 1.061618e-54 | -8.615850e-47 |
| Msa0126210 | Msa0160160 | 0.800462 | 1.425337e-48 | -8.615850e-47 |
| Msa0127340 | Msa0160160 | 0.832251 | 1.051664e-55 | -8.615850e-47 |
| Msa0127680 | Msa0160160 | 0.835512 | 1.607167e-56 | -8.615850e-47 |
| Msa0140380 | Msa0160160 | 0.839605 | 1.434034e-57 | -8.615850e-47 |
| Msa0153210 | Msa0160160 | 0.841248 | 5.330816e-58 | -8.615850e-47 |
| Msa0156510 | Msa0160160 | 0.800168 | 1.635992e-48 | -8.615850e-47 |
| Msa0158900 | Msa0160160 | 0.808933 | 2.428182e-50 | -8.615850e-47 |
| Msa0159590 | Msa0160160 | 0.827880 | 1.225058e-54 | -8.615850e-47 |
| Msa0159620 | Msa0160160 | 0.800599 | 1.336627e-48 | -8.615850e-47 |
| Msa0160160 | Msa0160170 | 0.993167 | 6.711340e-198 | -8.615850e-47 |
| Msa0160160 | Msa0160290 | 0.928152 | 4.323076e-92 | -8.615850e-47 |
| Msa0160160 | Msa0165830 | 0.853903 | 1.756628e-61 | -8.615850e-47 |
| Msa0160160 | Msa0166170 | 0.818351 | 2.051214e-52 | -8.615850e-47 |
| Msa0160160 | Msa0170070 | 0.803119 | 4.058211e-49 | -8.615850e-47 |
| Msa0160160 | Msa0186360 | 0.820892 | 5.393399e-53 | -8.615850e-47 |
| Msa0160160 | Msa0232760 | 0.811128 | 8.174648e-51 | -8.615850e-47 |
| Msa0160160 | Msa0272260 | 0.806710 | 7.208451e-50 | -8.615850e-47 |
| Msa0160160 | Msa0341680 | 0.827163 | 1.821155e-54 | -8.615850e-47 |
| Msa0160160 | Msa0367520 | 0.822559 | 2.220679e-53 | -8.615850e-47 |
| Msa0160160 | Msa0368860 | 0.821317 | 4.306046e-53 | -8.615850e-47 |
| Msa0160160 | Msa0373170 | 0.841971 | 3.438429e-58 | -8.615850e-47 |
| Msa0160160 | Msa0373500 | 0.807164 | 5.778990e-50 | -8.615850e-47 |
| Msa0160160 | Msa0373590 | 0.813855 | 2.072138e-51 | -8.615850e-47 |
| Msa0160160 | Msa0381730 | 0.801633 | 8.213065e-49 | -8.615850e-47 |
| Msa0160160 | Msa0383000 | 0.828529 | 8.546291e-55 | -8.615850e-47 |
| Msa0160160 | Msa0412130 | 0.806402 | 8.371033e-50 | -8.615850e-47 |
| Msa0160160 | Msa0415140 | 0.814474 | 1.512888e-51 | -8.615850e-47 |
| Msa0160160 | Msa0420670 | 0.817227 | 3.678469e-52 | -8.615850e-47 |
| Msa0160160 | Msa0421130 | 0.821391 | 4.139002e-53 | -8.615850e-47 |
| Msa0160160 | Msa0421750 | 0.839964 | 1.156326e-57 | -8.615850e-47 |
| Msa0160160 | Msa0431200 | 0.816644 | 4.973570e-52 | -8.615850e-47 |
| Msa0160160 | Msa0432010 | 0.820139 | 8.030208e-53 | -8.615850e-47 |
| Msa0160160 | Msa0433150 | 0.826155 | 3.167582e-54 | -8.615850e-47 |
| Msa0160160 | Msa0433760 | 0.821379 | 4.165090e-53 | -8.615850e-47 |
| Msa0160160 | Msa0443410 | 0.828496 | 8.704102e-55 | -8.615850e-47 |
| Msa0160160 | Msa0456670 | 0.814325 | 1.631655e-51 | -8.615850e-47 |
| Msa0160160 | Msa0462780 | 0.808225 | 3.439121e-50 | -8.615850e-47 |
| Msa0160160 | Msa0466520 | 0.821242 | 4.481157e-53 | -8.615850e-47 |
| Msa0160160 | Msa0466880 | 0.817180 | 3.769880e-52 | -8.615850e-47 |
| Msa0160160 | Msa0467690 | 0.842222 | 2.950144e-58 | -8.615850e-47 |
| Msa0160160 | Msa0468620 | 0.802280 | 6.046789e-49 | -8.615850e-47 |
| Msa0160160 | Msa0476280 | 0.806147 | 9.472385e-50 | -8.615850e-47 |
| Msa0160160 | Msa0477630 | 0.823496 | 1.342838e-53 | -8.615850e-47 |
| Msa0160160 | Msa0480730 | 0.843540 | 1.316053e-58 | -8.615850e-47 |
| Msa0160160 | Msa0481890 | 0.806700 | 7.243715e-50 | -8.615850e-47 |
| Msa0160160 | Msa0507810 | 0.806446 | 8.193080e-50 | -8.615850e-47 |
| Msa0160160 | Msa0507920 | 0.817531 | 3.141628e-52 | -8.615850e-47 |
| Msa0160160 | Msa0512530 | 0.820720 | 5.908575e-53 | -8.615850e-47 |
| Msa0160160 | Msa0513080 | 0.803410 | 3.532410e-49 | -8.615850e-47 |
| Msa0160160 | Msa0513560 | 0.820726 | 5.888782e-53 | -8.615850e-47 |
| Msa0160160 | Msa0514020 | 0.838464 | 2.831231e-57 | -8.615850e-47 |
| Msa0160160 | Msa0514500 | 0.803602 | 3.222865e-49 | -8.615850e-47 |
| Msa0160160 | Msa0520260 | 0.818692 | 1.716400e-52 | -8.615850e-47 |
| Msa0160160 | Msa0520870 | 0.840047 | 1.100139e-57 | -8.615850e-47 |
| Msa0160160 | Msa0521680 | 0.822729 | 2.027142e-53 | -8.615850e-47 |
| Msa0160160 | Msa0523380 | 0.816405 | 5.624842e-52 | -8.615850e-47 |
| Msa0160160 | Msa0524320 | 0.808750 | 2.656750e-50 | -8.615850e-47 |
| Msa0160160 | Msa0524430 | 0.811525 | 6.704231e-51 | -8.615850e-47 |
| Msa0160160 | Msa0524520 | 0.812739 | 3.644169e-51 | -8.615850e-47 |
| Msa0160160 | Msa0531960 | 0.817951 | 2.526787e-52 | -8.615850e-47 |
| Msa0160160 | Msa0534100 | 0.841450 | 4.718586e-58 | -8.615850e-47 |
| Msa0160160 | Msa0541740 | 0.810273 | 1.251218e-50 | -8.615850e-47 |
| Msa0160160 | Msa0550590 | 0.848981 | 4.332641e-60 | -8.615850e-47 |
| Msa0160160 | Msa0553750 | 0.818956 | 1.494990e-52 | -8.615850e-47 |
| Msa0160160 | Msa0554300 | 0.838323 | 3.079708e-57 | -8.615850e-47 |
| Msa0160160 | Msa0559100 | 0.842149 | 3.085189e-58 | -8.615850e-47 |
| Msa0160160 | Msa0561560 | 0.845071 | 5.103969e-59 | -8.615850e-47 |
| Msa0160160 | Msa0563740 | 0.828964 | 6.707426e-55 | -8.615850e-47 |
| Msa0160160 | Msa0563900 | 0.822904 | 1.845594e-53 | -8.615850e-47 |
| Msa0160160 | Msa0571620 | 0.834106 | 3.631531e-56 | -8.615850e-47 |
| Msa0160160 | Msa0572830 | 0.825766 | 3.918884e-54 | -8.615850e-47 |
| Msa0160160 | Msa0577280 | 0.850413 | 1.725412e-60 | -8.615850e-47 |
| Msa0160160 | Msa0577330 | 0.854264 | 1.382319e-61 | -8.615850e-47 |
| Msa0160160 | Msa0577450 | 0.814222 | 1.719300e-51 | -8.615850e-47 |
| Msa0160160 | Msa0577820 | 0.814069 | 1.858939e-51 | -8.615850e-47 |
| Msa0160160 | Msa0586200 | 0.808234 | 3.423236e-50 | -8.615850e-47 |
| Msa0160160 | Msa0588920 | 0.802458 | 5.556707e-49 | -8.615850e-47 |
| Msa0160160 | Msa0590200 | 0.851437 | 8.879663e-61 | -8.615850e-47 |
| Msa0160160 | Msa0603410 | 0.806288 | 8.846537e-50 | -8.615850e-47 |
| Msa0160160 | Msa0606100 | 0.853597 | 2.150979e-61 | -8.615850e-47 |
| Msa0160160 | Msa0607800 | 0.843500 | 1.349113e-58 | -8.615850e-47 |
| Msa0160160 | Msa0608350 | 0.814865 | 1.239091e-51 | -8.615850e-47 |
| Msa0160160 | Msa0613580 | 0.832559 | 8.821487e-56 | -8.615850e-47 |
| Msa0160160 | Msa0613630 | 0.850062 | 2.165219e-60 | -8.615850e-47 |
| Msa0160160 | Msa0615630 | 0.837565 | 4.823024e-57 | -8.615850e-47 |
| Msa0160160 | Msa0620500 | 0.856046 | 4.191871e-62 | -8.615850e-47 |
| Msa0160160 | Msa0621710 | 0.834503 | 2.886867e-56 | -8.615850e-47 |
| Msa0160160 | Msa0622920 | 0.852123 | 5.674145e-61 | -8.615850e-47 |
| Msa0160160 | Msa0625620 | 0.809605 | 1.742634e-50 | -8.615850e-47 |
| Msa0160160 | Msa0630660 | 0.829934 | 3.898212e-55 | -8.615850e-47 |
| Msa0160160 | Msa0645340 | 0.800079 | 1.705538e-48 | -8.615850e-47 |
| Msa0160160 | Msa0647050 | 0.855204 | 7.380003e-62 | -8.615850e-47 |
| Msa0160160 | Msa0647440 | 0.833810 | 4.305209e-56 | -8.615850e-47 |
| Msa0160160 | Msa0648040 | 0.842022 | 3.332225e-58 | -8.615850e-47 |
| Msa0160160 | Msa0648760 | 0.835073 | 2.074723e-56 | -8.615850e-47 |
| Msa0160160 | Msa0654740 | 0.819716 | 1.003455e-52 | -8.615850e-47 |
| Msa0160160 | Msa0657210 | 0.811451 | 6.956427e-51 | -8.615850e-47 |
| Msa0160160 | Msa0668900 | 0.840080 | 1.078535e-57 | -8.615850e-47 |
| Msa0160160 | Msa0687090 | 0.832342 | 9.986161e-56 | -8.615850e-47 |
| Msa0160160 | Msa0688380 | 0.815813 | 7.625760e-52 | -8.615850e-47 |
| Msa0160160 | Msa0690320 | 0.820392 | 7.026482e-53 | -8.615850e-47 |
| Msa0160160 | Msa0690740 | 0.852450 | 4.580149e-61 | -8.615850e-47 |
| Msa0160160 | Msa0691270 | 0.823657 | 1.231203e-53 | -8.615850e-47 |
| Msa0160160 | Msa0698730 | 0.844181 | 8.860855e-59 | -8.615850e-47 |
| Msa0160160 | Msa0701250 | 0.810301 | 1.233867e-50 | -8.615850e-47 |
| Msa0160160 | Msa0707260 | 0.801110 | 1.051019e-48 | -8.615850e-47 |
| Msa0160160 | Msa0709440 | 0.806935 | 6.460883e-50 | -8.615850e-47 |
| Msa0160160 | Msa0713920 | 0.807222 | 5.617735e-50 | -8.615850e-47 |
| Msa0160160 | Msa0714520 | 0.859444 | 4.119076e-63 | -8.615850e-47 |
| Msa0160160 | Msa0716480 | 0.800643 | 1.308858e-48 | -8.615850e-47 |
| Msa0160160 | Msa0717900 | 0.832830 | 7.555149e-56 | -8.615850e-47 |
| Msa0160160 | Msa0720280 | 0.808944 | 2.414512e-50 | -8.615850e-47 |
| Msa0160160 | Msa0722220 | 0.806279 | 8.884951e-50 | -8.615850e-47 |
| Msa0160160 | Msa0743440 | 0.827118 | 1.866021e-54 | -8.615850e-47 |
| Msa0160160 | Msa0745720 | 0.805046 | 1.612464e-49 | -8.615850e-47 |
| Msa0160160 | Msa0747740 | 0.856828 | 2.470489e-62 | -8.615850e-47 |
| Msa0160160 | Msa0758590 | 0.806392 | 8.411946e-50 | -8.615850e-47 |
| Msa0160160 | Msa0758650 | 0.820282 | 7.448768e-53 | -8.615850e-47 |
| Msa0160160 | Msa0765810 | 0.812842 | 3.459497e-51 | -8.615850e-47 |
| Msa0160160 | Msa0773630 | 0.809182 | 2.147673e-50 | -8.615850e-47 |
| Msa0160160 | Msa0780910 | 0.808595 | 2.866404e-50 | -8.615850e-47 |
| Msa0160160 | Msa0800660 | 0.836189 | 1.082582e-56 | -8.615850e-47 |
| Msa0160160 | Msa0803140 | 0.804710 | 1.895341e-49 | -8.615850e-47 |
| Msa0160160 | Msa0805680 | 0.812853 | 3.439191e-51 | -8.615850e-47 |
| Msa0160160 | Msa0811020 | 0.829511 | 4.941357e-55 | -8.615850e-47 |
| Msa0160160 | Msa0816080 | 0.838880 | 2.210297e-57 | -8.615850e-47 |
| Msa0160160 | Msa0817360 | 0.809836 | 1.553786e-50 | -8.615850e-47 |
| Msa0160160 | Msa0818880 | 0.814071 | 1.856674e-51 | -8.615850e-47 |
| Msa0160160 | Msa0821160 | 0.818081 | 2.360852e-52 | -8.615850e-47 |
| Msa0160160 | Msa0835350 | 0.801586 | 8.397147e-49 | -8.615850e-47 |
| Msa0160160 | Msa0837460 | 0.803705 | 3.069324e-49 | -8.615850e-47 |
| Msa0160160 | Msa0851300 | 0.802490 | 5.473836e-49 | -8.615850e-47 |
| Msa0160160 | Msa0861440 | 0.803049 | 4.196874e-49 | -8.615850e-47 |
| Msa0160160 | Msa0863620 | 0.818488 | 1.909163e-52 | -8.615850e-47 |
| Msa0160160 | Msa0867110 | 0.806286 | 8.857708e-50 | -8.615850e-47 |
| Msa0160160 | Msa0900090 | 0.805323 | 1.410802e-49 | -8.615850e-47 |
| Msa0160160 | Msa0909760 | 0.843321 | 1.505486e-58 | -8.615850e-47 |
| Msa0160160 | Msa0924430 | 0.820707 | 5.949967e-53 | -8.615850e-47 |
| Msa0160160 | Msa0926310 | 0.813171 | 2.929216e-51 | -8.615850e-47 |
| Msa0160160 | Msa0931590 | 0.837639 | 4.615007e-57 | -8.615850e-47 |
| Msa0160160 | Msa0966320 | 0.805943 | 1.045792e-49 | -8.615850e-47 |
| Msa0160160 | Msa0966480 | 0.811981 | 5.334687e-51 | -8.615850e-47 |
| Msa0160160 | Msa0989370 | 0.808666 | 2.768983e-50 | -8.615850e-47 |
| Msa0160160 | Msa1000780 | 0.803197 | 3.910779e-49 | -8.615850e-47 |
| Msa0160160 | Msa1000970 | 0.813503 | 2.476298e-51 | -8.615850e-47 |
| Msa0160160 | Msa1002640 | 0.822305 | 2.542756e-53 | -8.615850e-47 |
| Msa0160160 | Msa1008670 | 0.858113 | 1.029076e-62 | -8.615850e-47 |
| Msa0160160 | Msa1008680 | 0.812290 | 4.567053e-51 | -8.615850e-47 |
| Msa0160160 | Msa1033920 | 0.840501 | 8.369881e-58 | -8.615850e-47 |
| Msa0160160 | Msa1035570 | 0.826618 | 2.457298e-54 | -8.615850e-47 |
| Msa0160160 | Msa1035610 | 0.817166 | 3.796452e-52 | -8.615850e-47 |
| Msa0160160 | Msa1035650 | 0.837623 | 4.659083e-57 | -8.615850e-47 |
| Msa0160160 | Msa1042880 | 0.821667 | 3.573935e-53 | -8.615850e-47 |
| Msa0160160 | Msa1056830 | 0.817209 | 3.713039e-52 | -8.615850e-47 |
| Msa0160160 | Msa1059020 | 0.819639 | 1.044956e-52 | -8.615850e-47 |
| Msa0160160 | Msa1060900 | 0.806136 | 9.521879e-50 | -8.615850e-47 |
| Msa0160160 | Msa1074150 | 0.819637 | 1.046362e-52 | -8.615850e-47 |
| Msa0160160 | Msa1076020 | 0.829469 | 5.060245e-55 | -8.615850e-47 |
| Msa0160160 | Msa1078880 | 0.833371 | 5.543100e-56 | -8.615850e-47 |
| Msa0160160 | Msa1078970 | 0.825049 | 5.794575e-54 | -8.615850e-47 |
| Msa0160160 | Msa1081390 | 0.805149 | 1.534188e-49 | -8.615850e-47 |
| Msa0160160 | Msa1082380 | 0.837612 | 4.690275e-57 | -8.615850e-47 |
| Msa0160160 | Msa1084530 | 0.812432 | 4.251846e-51 | -8.615850e-47 |
| Msa0160160 | Msa1114630 | 0.820557 | 6.440120e-53 | -8.615850e-47 |
| Msa0160160 | Msa1116190 | 0.839809 | 1.268549e-57 | -8.615850e-47 |
| Msa0160160 | Msa1116220 | 0.813509 | 2.468811e-51 | -8.615850e-47 |
| Msa0160160 | Msa1116660 | 0.805711 | 1.169683e-49 | -8.615850e-47 |
| Msa0160160 | Msa1125820 | 0.815977 | 7.010985e-52 | -8.615850e-47 |
| Msa0160160 | Msa1125990 | 0.810019 | 1.419374e-50 | -8.615850e-47 |
| Msa0160160 | Msa1127280 | 0.840871 | 6.696663e-58 | -8.615850e-47 |
| Msa0160160 | Msa1132530 | 0.815193 | 1.048081e-51 | -8.615850e-47 |
| Msa0160160 | Msa1139050 | 0.831453 | 1.655251e-55 | -8.615850e-47 |
| Msa0160160 | Msa1148630 | 0.813690 | 2.252521e-51 | -8.615850e-47 |
| Msa0160160 | Msa1149450 | 0.850598 | 1.531430e-60 | -8.615850e-47 |
| Msa0160160 | Msa1159590 | 0.829082 | 6.280932e-55 | -8.615850e-47 |
| Msa0160160 | Msa1162180 | 0.808024 | 3.793838e-50 | -8.615850e-47 |
| Msa0160160 | Msa1162880 | 0.845987 | 2.881147e-59 | -8.615850e-47 |
| Msa0160160 | Msa1163180 | 0.831676 | 1.458124e-55 | -8.615850e-47 |
| Msa0160160 | Msa1165480 | 0.847261 | 1.293048e-59 | -8.615850e-47 |
| Msa0160160 | Msa1169190 | 0.831164 | 1.948935e-55 | -8.615850e-47 |
| Msa0160160 | Msa1171290 | 0.804030 | 2.626845e-49 | -8.615850e-47 |
| Msa0160160 | Msa1190390 | 0.851110 | 1.098322e-60 | -8.615850e-47 |
| Msa0160160 | Msa1201780 | 0.811000 | 8.710984e-51 | -8.615850e-47 |
| Msa0160160 | Msa1213830 | 0.842805 | 2.066664e-58 | -8.615850e-47 |
| Msa0160160 | Msa1214350 | 0.865425 | 5.961008e-65 | -8.615850e-47 |
| Msa0160160 | Msa1215980 | 0.856785 | 2.543606e-62 | -8.615850e-47 |
| Msa0160160 | Msa1218820 | 0.826152 | 3.172547e-54 | -8.615850e-47 |
| Msa0160160 | Msa1220030 | 0.828522 | 8.579705e-55 | -8.615850e-47 |
| Msa0160160 | Msa1220170 | 0.813890 | 2.035615e-51 | -8.615850e-47 |
| Msa0160160 | Msa1223390 | 0.822467 | 2.331776e-53 | -8.615850e-47 |
| Msa0160160 | Msa1244240 | 0.817971 | 2.500353e-52 | -8.615850e-47 |
| Msa0160160 | Msa1254420 | 0.837269 | 5.742303e-57 | -8.615850e-47 |
| Msa0160160 | Msa1254540 | 0.867287 | 1.529947e-65 | -8.615850e-47 |
| Msa0160160 | Msa1261050 | 0.839068 | 1.975922e-57 | -8.615850e-47 |
| Msa0160160 | Msa1263740 | 0.832669 | 8.284617e-56 | -8.615850e-47 |
| Msa0160160 | Msa1263780 | 0.847575 | 1.060637e-59 | -8.615850e-47 |
| Msa0160160 | Msa1266300 | 0.804270 | 2.342017e-49 | -8.615850e-47 |
| Msa0160160 | Msa1267930 | 0.809808 | 1.575893e-50 | -8.615850e-47 |
| Msa0160160 | Msa1294460 | 0.840583 | 7.969624e-58 | -8.615850e-47 |
| Msa0160160 | Msa1294790 | 0.848941 | 4.446702e-60 | -8.615850e-47 |
| Msa0160160 | Msa1300460 | 0.852325 | 4.972857e-61 | -8.615850e-47 |
| Msa0160160 | Msa1301820 | 0.817587 | 3.051679e-52 | -8.615850e-47 |
| Msa0160160 | Msa1305780 | 0.840032 | 1.110094e-57 | -8.615850e-47 |
| Msa0160160 | Msa1305920 | 0.820952 | 5.224878e-53 | -8.615850e-47 |
| Msa0160160 | Msa1306570 | 0.810028 | 1.412755e-50 | -8.615850e-47 |
| Msa0160160 | Msa1306790 | 0.825505 | 4.518631e-54 | -8.615850e-47 |
| Msa0160160 | Msa1321530 | 0.820629 | 6.199468e-53 | -8.615850e-47 |
| Msa0160160 | Msa1332950 | 0.835265 | 1.856069e-56 | -8.615850e-47 |
| Msa0160160 | Msa1339170 | 0.867415 | 1.392027e-65 | -8.615850e-47 |
| Msa0160160 | Msa1342810 | 0.805658 | 1.200374e-49 | -8.615850e-47 |
| Msa0160160 | Msa1359980 | 0.804900 | 1.729862e-49 | -8.615850e-47 |
| Msa0160160 | Msa1361930 | 0.839976 | 1.147888e-57 | -8.615850e-47 |
| Msa0160160 | Msa1364410 | 0.815091 | 1.104127e-51 | -8.615850e-47 |
| Msa0160160 | Msa1364680 | 0.802102 | 6.577651e-49 | -8.615850e-47 |
| Msa0160160 | Msa1367520 | 0.805048 | 1.611157e-49 | -8.615850e-47 |
| Msa0160160 | Msa1368750 | 0.821490 | 3.926549e-53 | -8.615850e-47 |
| Msa0160160 | Msa1374790 | 0.822843 | 1.906713e-53 | -8.615850e-47 |
| Msa0160160 | Msa1375350 | 0.812529 | 4.049158e-51 | -8.615850e-47 |
| Msa0160160 | Msa1381470 | 0.822240 | 2.632929e-53 | -8.615850e-47 |
| Msa0160160 | Msa1383310 | 0.803240 | 3.831628e-49 | -8.615850e-47 |
| Msa0160160 | Msa1387440 | 0.804395 | 2.205372e-49 | -8.615850e-47 |
| Msa0160160 | Msa1387500 | 0.803384 | 3.577640e-49 | -8.615850e-47 |
| Msa0160160 | Msa1393560 | 0.822197 | 2.694225e-53 | -8.615850e-47 |
| Msa0160160 | Msa1399190 | 0.814897 | 1.219221e-51 | -8.615850e-47 |
| Msa0160160 | Msa1400010 | 0.809506 | 1.829940e-50 | -8.615850e-47 |
| Msa0160160 | Msa1406720 | 0.825311 | 5.023336e-54 | -8.615850e-47 |
| Msa0160160 | Msa1424590 | 0.809043 | 2.299050e-50 | -8.615850e-47 |
| Msa0160160 | Msa1426320 | 0.816555 | 5.206396e-52 | -8.615850e-47 |
| Msa0160160 | Msa1434380 | 0.808281 | 3.344760e-50 | -8.615850e-47 |
| Msa0160160 | Msa1434640 | 0.827087 | 1.899106e-54 | -8.615850e-47 |
| Msa0160160 | Msa1442260 | 0.843115 | 1.708284e-58 | -8.615850e-47 |
| Msa0160160 | Msa1445120 | 0.810534 | 1.098885e-50 | -8.615850e-47 |
| Msa0160160 | Msa1447170 | 0.815212 | 1.037785e-51 | -8.615850e-47 |
| Msa0160160 | Msa1450190 | 0.828699 | 7.776115e-55 | -8.615850e-47 |
| Msa0160160 | Msa1451820 | 0.822160 | 2.748395e-53 | -8.615850e-47 |
| Msa0160160 | Msa1454010 | 0.805490 | 1.301917e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160160 | MtrunA17_Chr1g0146731 | 80.702 | 342 | 8 | 3 | 1 | 284 | 1 | 342 | 0.0 | 544 |
| Msa0160160 | MtrunA17_Chr1g0146731 | 83.636 | 55 | 9 | 0 | 284 | 338 | 186 | 240 | 3.49e-23 | 99.8 |
| Msa0160160 | MtrunA17_Chr1g0146761 | 68.354 | 316 | 62 | 7 | 1 | 284 | 51 | 360 | 4.52e-142 | 409 |
| Msa0160160 | MtrunA17_Chr1g0146761 | 64.407 | 59 | 21 | 0 | 284 | 342 | 203 | 261 | 3.16e-17 | 82.8 |
| Msa0160160 | MtrunA17_Chr3g0129881 | 54.206 | 321 | 89 | 3 | 22 | 284 | 70 | 390 | 5.22e-114 | 339 |
| Msa0160160 | MtrunA17_Chr1g0146751 | 82.031 | 128 | 23 | 0 | 127 | 254 | 69 | 196 | 3.11e-71 | 222 |
| Msa0160160 | MtrunA17_Chr1g0146751 | 46.000 | 100 | 47 | 1 | 284 | 383 | 70 | 162 | 7.66e-19 | 84.3 |
| Msa0160160 | MtrunA17_Chr1g0146741 | 65.476 | 168 | 33 | 2 | 55 | 207 | 23 | 180 | 1.31e-63 | 202 |
| Msa0160160 | MtrunA17_Chr1g0146741 | 47.674 | 86 | 27 | 3 | 284 | 361 | 111 | 186 | 2.35e-14 | 71.2 |
| Msa0160160 | MtrunA17_Chr8g0357751 | 73.786 | 103 | 26 | 1 | 127 | 228 | 14 | 116 | 3.24e-46 | 156 |
| Msa0160160 | MtrunA17_Chr8g0357751 | 67.273 | 55 | 18 | 0 | 284 | 338 | 15 | 69 | 1.06e-17 | 80.1 |
| Msa0160160 | MtrunA17_Chr3g0129871 | 43.284 | 67 | 33 | 1 | 1 | 67 | 1 | 62 | 4.13e-13 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160160 | AT5G24330.1 | 61.392 | 316 | 64 | 3 | 27 | 284 | 34 | 349 | 2.30e-132 | 384 |
| Msa0160160 | AT5G24330.1 | 66.667 | 60 | 20 | 0 | 284 | 343 | 192 | 251 | 6.24e-18 | 85.1 |
| Msa0160160 | AT5G09790.1 | 69.124 | 217 | 67 | 0 | 68 | 284 | 162 | 378 | 1.42e-107 | 322 |
| Msa0160160 | AT5G09790.1 | 44.681 | 94 | 45 | 1 | 284 | 377 | 222 | 308 | 2.71e-15 | 77.4 |
| Msa0160160 | AT5G09790.2 | 69.124 | 217 | 67 | 0 | 68 | 284 | 163 | 379 | 1.78e-107 | 322 |
| Msa0160160 | AT5G09790.2 | 44.681 | 94 | 45 | 1 | 284 | 377 | 223 | 309 | 2.93e-15 | 77.4 |
Find 79 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATATTGCTACGTTTATC+TGG | 0.121333 | 1_4:+32187828 | None:intergenic |
| ATTTGCCGGAGTTGCATTTC+TGG | 0.190452 | 1_4:+32190247 | None:intergenic |
| AATATAGCACGTTTCATTAA+TGG | 0.211173 | 1_4:-32187813 | Msa0160160:CDS |
| CATTATATCTCACGCATTTC+AGG | 0.255009 | 1_4:+32187280 | None:intergenic |
| CTCAATGAAGCCATGAGATT+TGG | 0.264226 | 1_4:+32184538 | None:intergenic |
| GCATCCCTTGGCGCCATTCC+AGG | 0.276840 | 1_4:+32189035 | None:intergenic |
| CGCAAAGAAGCAACTTAGTT+GGG | 0.323658 | 1_4:+32190223 | None:intergenic |
| CAACTTAGTTGGGGATTTGC+CGG | 0.329908 | 1_4:+32190233 | None:intergenic |
| GGGCAAAACCAAGAGGATTT+AGG | 0.342107 | 1_4:+32190144 | None:intergenic |
| CTCCTCTTCAAATCATCATT+TGG | 0.347535 | 1_4:+32189134 | None:intergenic |
| TACAACATATTCTGTTGTTA+TGG | 0.360029 | 1_4:+32185070 | None:intergenic |
| CAGCTGTTGCTGTTTGTGCC+AGG | 0.386935 | 1_4:-32184463 | Msa0160160:CDS |
| TCAATGAAGCCATGAGATTT+GGG | 0.387147 | 1_4:+32184539 | None:intergenic |
| GTCATCATCGTTGAAGGTTG+TGG | 0.391049 | 1_4:+32190281 | None:intergenic |
| GTTGTTTATGATCCTGTAGA+AGG | 0.406850 | 1_4:-32188093 | Msa0160160:CDS |
| TGGGAGCTGGAATTCTTCTT+CGG | 0.410162 | 1_4:+32190313 | None:intergenic |
| CTTCTGTACCTAAATCCTCT+TGG | 0.418430 | 1_4:-32190152 | Msa0160160:intron |
| GAGATATAGCAAAGGGAGAA+AGG | 0.428636 | 1_4:-32187221 | Msa0160160:CDS |
| GAGATTTGGGATGTGAGAAC+AGG | 0.433354 | 1_4:+32184552 | None:intergenic |
| ACGTTCAAGAACAGGAGAAT+TGG | 0.452094 | 1_4:+32189013 | None:intergenic |
| ATTCCTCCACGTTCAAGAAC+AGG | 0.452190 | 1_4:+32189005 | None:intergenic |
| CAGCAACAGCTGAAGTTTGA+GGG | 0.452380 | 1_4:+32184474 | None:intergenic |
| TTAGGTACAGAAGGGAGTAT+AGG | 0.452463 | 1_4:+32190162 | None:intergenic |
| TCGCAAAGAAGCAACTTAGT+TGG | 0.454512 | 1_4:+32190222 | None:intergenic |
| CTTTGCGACAATTGCGACAA+CGG | 0.472963 | 1_4:-32190207 | Msa0160160:CDS |
| CGCGTTGACTGCTACTAAAA+CGG | 0.476912 | 1_4:-32189084 | Msa0160160:CDS |
| CTATATTGCTACGTTTATCT+GGG | 0.481139 | 1_4:+32187829 | None:intergenic |
| TGCGTGAGATATAATGTTGA+TGG | 0.484685 | 1_4:-32187273 | Msa0160160:CDS |
| CTCCTCTTTGAATCATCACC+TGG | 0.486791 | 1_4:+32184445 | None:intergenic |
| AAACATGTGCAGAAGTATGA+TGG | 0.488621 | 1_4:-32185258 | Msa0160160:CDS |
| ACAATAATAACAGAATATGT+TGG | 0.490743 | 1_4:-32187948 | Msa0160160:CDS |
| CAAGAGGATTTAGGTACAGA+AGG | 0.492170 | 1_4:+32190153 | None:intergenic |
| TAACTTGTGCAGAAGTATGA+TGG | 0.493269 | 1_4:-32188142 | Msa0160160:CDS |
| ATAAATACTTACCCTTCTAC+AGG | 0.495310 | 1_4:+32185197 | None:intergenic |
| TCTGCACATGTTTAGAGTCT+CGG | 0.497659 | 1_4:+32185268 | None:intergenic |
| ACAGCAACAGCTGAAGTTTG+AGG | 0.499553 | 1_4:+32184473 | None:intergenic |
| TTCTAATCCTTCACAGTCAC+TGG | 0.505311 | 1_4:-32187859 | Msa0160160:CDS |
| TAGGTGTGAGGCAGAAGAGA+TGG | 0.510947 | 1_4:+32190181 | None:intergenic |
| GACGTCGTCATCATCGTTGA+AGG | 0.512130 | 1_4:+32190275 | None:intergenic |
| ATAAGTACTTACCCTTCTAC+AGG | 0.515050 | 1_4:+32188081 | None:intergenic |
| AGCGTTGAGTGCAACTAAAA+CGG | 0.516519 | 1_4:-32184395 | Msa0160160:CDS |
| ATTAGAACAGATGGCGTCGT+TGG | 0.518768 | 1_4:-32189111 | Msa0160160:CDS |
| TTCTCACATCCCAAATCTCA+TGG | 0.520195 | 1_4:-32184548 | Msa0160160:CDS |
| GCAAATAGAGATATAGCAAA+GGG | 0.521433 | 1_4:-32187228 | Msa0160160:CDS |
| AATGAGCTTACGTACATGCC+TGG | 0.527386 | 1_4:-32189053 | Msa0160160:CDS |
| ACAGGAGAATTGGCATCCCT+TGG | 0.541184 | 1_4:+32189023 | None:intergenic |
| TCTTGAACGTGGAGGAATGC+AGG | 0.541405 | 1_4:-32189000 | Msa0160160:intron |
| AATTAGACAAAATGTTCAGT+TGG | 0.544685 | 1_4:+32187162 | None:intergenic |
| AAGAATCGGGAATATGATGA+TGG | 0.544853 | 1_4:-32187909 | Msa0160160:CDS |
| AGGAGAATGTCCGCCCCTCA+TGG | 0.545962 | 1_4:-32185231 | Msa0160160:CDS |
| AGGAGAATGTCCGCCCCTCA+TGG | 0.545962 | 1_4:-32188115 | Msa0160160:CDS |
| TGCAGAAGTATGATGGAAAG+AGG | 0.546783 | 1_4:-32185251 | Msa0160160:CDS |
| TGCAGAAGTATGATGGAAAG+AGG | 0.546783 | 1_4:-32188135 | Msa0160160:CDS |
| AAAGAGGAGATTAGAACAGA+TGG | 0.557621 | 1_4:-32184431 | Msa0160160:CDS |
| AATTCTCCTGTTCTTGAACG+TGG | 0.561001 | 1_4:-32189011 | Msa0160160:CDS |
| CATGCCTGGAATGGCGCCAA+GGG | 0.564637 | 1_4:-32189039 | Msa0160160:CDS |
| TGCAAATAGAGATATAGCAA+AGG | 0.569319 | 1_4:-32187229 | Msa0160160:CDS |
| GGAATTCTTCTTCGGCGAAG+TGG | 0.581802 | 1_4:+32190321 | None:intergenic |
| AGATTTGGGATGTGAGAACA+GGG | 0.585093 | 1_4:+32184553 | None:intergenic |
| TCGGCGAAGTGGTGAAGCCA+TGG | 0.586776 | 1_4:+32190332 | None:intergenic |
| ACATGCCTGGAATGGCGCCA+AGG | 0.588883 | 1_4:-32189040 | Msa0160160:CDS |
| TGCCAAATGATGATTTGAAG+AGG | 0.592036 | 1_4:-32189136 | Msa0160160:CDS |
| GAAGAGGAGATTAGAACAGA+TGG | 0.593117 | 1_4:-32189120 | Msa0160160:CDS |
| GCTTACGTACATGCCTGGAA+TGG | 0.609175 | 1_4:-32189048 | Msa0160160:CDS |
| TTGTTTATGATCCTGTAGAA+GGG | 0.614616 | 1_4:-32188092 | Msa0160160:intron |
| TCTGCACAAGTTAAGAGTCT+CGG | 0.617054 | 1_4:+32188152 | None:intergenic |
| GCAAAGAAGCAACTTAGTTG+GGG | 0.617673 | 1_4:+32190224 | None:intergenic |
| AAGAGGATTTAGGTACAGAA+GGG | 0.621884 | 1_4:+32190154 | None:intergenic |
| GTTTGCCAGAAATGCAACTC+CGG | 0.639299 | 1_4:-32190252 | Msa0160160:CDS |
| TGCCAGGTGATGATTCAAAG+AGG | 0.645100 | 1_4:-32184447 | Msa0160160:CDS |
| GATTTGGGATGTGAGAACAG+GGG | 0.650125 | 1_4:+32184554 | None:intergenic |
| TCTCCTGTTCTTGAACGTGG+AGG | 0.653986 | 1_4:-32189008 | Msa0160160:CDS |
| CAGAAGGGAGTATAGGTGTG+AGG | 0.654132 | 1_4:+32190169 | None:intergenic |
| AGGTTGTATTATGACTACAA+TGG | 0.669535 | 1_4:-32187201 | Msa0160160:CDS |
| GGATCATAAACAACCATGAG+GGG | 0.675550 | 1_4:+32188102 | None:intergenic |
| AGGATCATAAACAACCATGA+GGG | 0.678750 | 1_4:+32188101 | None:intergenic |
| TCATAAACAACCATGAGGGG+CGG | 0.687468 | 1_4:+32188105 | None:intergenic |
| CAGGATCATAAACAACCATG+AGG | 0.703912 | 1_4:+32188100 | None:intergenic |
| CAGATGACCAGTGACTGTGA+AGG | 0.718767 | 1_4:+32187852 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTTCTTTTTTTTGT+AGG | - | chr1_4:32186704-32186723 | Msa0160160:intron | 10.0% |
| !! | AAAAAAGAAAATTAAAAGTC+AGG | + | chr1_4:32186700-32186719 | None:intergenic | 15.0% |
| !!! | TATTATTGTCAAATCTTTTA+TGG | + | chr1_4:32186752-32186771 | None:intergenic | 15.0% |
| !! | AATATAATATAGTGAGAAAT+TGG | - | chr1_4:32187005-32187024 | Msa0160160:intron | 15.0% |
| !! | AATAACAACTTATTGTAATA+AGG | - | chr1_4:32187584-32187603 | Msa0160160:intron | 15.0% |
| !! | ATTAAAATACTTAATGTGTT+CGG | + | chr1_4:32188384-32188403 | None:intergenic | 15.0% |
| !! | AAGTAGTTATTTAACTATTT+GGG | - | chr1_4:32188804-32188823 | Msa0160160:intron | 15.0% |
| !! | ATGAAATGAAATCAAATGAA+AGG | + | chr1_4:32184633-32184652 | None:intergenic | 20.0% |
| !!! | CTTGAAGAAATCAATAATTT+TGG | + | chr1_4:32184904-32184923 | None:intergenic | 20.0% |
| !! | TAATGTTTAGAGAATTTGAT+TGG | - | chr1_4:32185004-32185023 | Msa0160160:intron | 20.0% |
| !!! | TTAGGTATTATATTGTTGTT+AGG | - | chr1_4:32185763-32185782 | Msa0160160:intron | 20.0% |
| !! | TTAATTGAAAAATTCTACTG+TGG | - | chr1_4:32185864-32185883 | Msa0160160:intron | 20.0% |
| !!! | GTTTGTATATATTTTTTCTC+AGG | - | chr1_4:32186518-32186537 | Msa0160160:intron | 20.0% |
| !! | ACAATAATAACAGAATATGT+TGG | - | chr1_4:32186763-32186782 | Msa0160160:intron | 20.0% |
| !! | CAGAGAATAAAATTTGAAAA+AGG | + | chr1_4:32186953-32186972 | None:intergenic | 20.0% |
| !! | TTCATCTTAAAGAATGTTAT+CGG | - | chr1_4:32187032-32187051 | Msa0160160:intron | 20.0% |
| !!! | ATGTAATTTTTAGATACTTC+TGG | - | chr1_4:32187766-32187785 | Msa0160160:intron | 20.0% |
| !! | TATACATAAAAATATCCGTT+TGG | + | chr1_4:32187807-32187826 | None:intergenic | 20.0% |
| !! | GAAATTATCATGTATAACTA+AGG | - | chr1_4:32187930-32187949 | Msa0160160:CDS | 20.0% |
| !!! | ACTAACTTTTATCTTCTTAT+TGG | + | chr1_4:32187987-32188006 | None:intergenic | 20.0% |
| !! | ATAAAAGTTAGTCAAATCAT+AGG | - | chr1_4:32187995-32188014 | Msa0160160:intron | 20.0% |
| !! | TTAATTGCATGTCTATAATA+TGG | - | chr1_4:32188399-32188418 | Msa0160160:intron | 20.0% |
| !! | ATTACTTCATAAATGTGAAA+TGG | - | chr1_4:32188523-32188542 | Msa0160160:intron | 20.0% |
| !! | TTACTTCATAAATGTGAAAT+GGG | - | chr1_4:32188524-32188543 | Msa0160160:intron | 20.0% |
| !! | CAAGTAGTTATTTAACTATT+TGG | - | chr1_4:32188803-32188822 | Msa0160160:intron | 20.0% |
| !!! | GTAGTTATTTAACTTTTTGT+TGG | - | chr1_4:32188840-32188859 | Msa0160160:intron | 20.0% |
| !!! | TATTTTTTATTTTGAGCTGT+TGG | - | chr1_4:32189072-32189091 | Msa0160160:CDS | 20.0% |
| !!! | TTTCAATTATGTTCTTTTGT+AGG | - | chr1_4:32189581-32189600 | Msa0160160:intron | 20.0% |
| !! | CACAAAAAAAAAATACCTAT+GGG | - | chr1_4:32190053-32190072 | Msa0160160:intron | 20.0% |
| !! | ACAAAAAAAAAATACCTATG+GGG | - | chr1_4:32190054-32190073 | Msa0160160:intron | 20.0% |
| ! | TTTAATAACGTGATTAGATC+TGG | - | chr1_4:32184781-32184800 | Msa0160160:intron | 25.0% |
| !!! | ATAATTTTGGTTTGTACAAG+AGG | + | chr1_4:32184891-32184910 | None:intergenic | 25.0% |
| !! | ATAACTTTTGTAAGACTGTT+TGG | + | chr1_4:32185397-32185416 | None:intergenic | 25.0% |
| !!! | CTTAATTGAGTTTGTTAGTT+AGG | - | chr1_4:32185745-32185764 | Msa0160160:intron | 25.0% |
| !!! | TATTGTTGTTAGGATACTTT+TGG | - | chr1_4:32185773-32185792 | Msa0160160:intron | 25.0% |
| !! | TTAGGTTGTCAATACTAATT+AGG | - | chr1_4:32186101-32186120 | Msa0160160:intron | 25.0% |
| !!! | ATGTAGACTTTTTGAAGAAT+CGG | - | chr1_4:32186788-32186807 | Msa0160160:intron | 25.0% |
| ! | AATATAGCACGTTTCATTAA+TGG | - | chr1_4:32186898-32186917 | Msa0160160:intron | 25.0% |
| ! | TTGAAAAAGGAAGAAACATA+CGG | + | chr1_4:32186940-32186959 | None:intergenic | 25.0% |
| !! | ATTTTATTCTCTGCATATGT+AGG | - | chr1_4:32186960-32186979 | Msa0160160:intron | 25.0% |
| !!! | TGTTTTGTGTGTTTTAGAAA+GGG | - | chr1_4:32187089-32187108 | Msa0160160:intron | 25.0% |
| ! | TAATTATCAATTGCTACTAC+TGG | + | chr1_4:32187127-32187146 | None:intergenic | 25.0% |
| ! | AATTAGACAAAATGTTCAGT+TGG | + | chr1_4:32187552-32187571 | None:intergenic | 25.0% |
| !! | TACAATAAGTTGTTATTGAC+AGG | + | chr1_4:32187581-32187600 | None:intergenic | 25.0% |
| ! | TAAGGAAATGATATCTTAAC+AGG | - | chr1_4:32187602-32187621 | Msa0160160:intron | 25.0% |
| ! | AAGGAAATGATATCTTAACA+GGG | - | chr1_4:32187603-32187622 | Msa0160160:intron | 25.0% |
| ! | GAATCAACTAATAGATTTAG+AGG | + | chr1_4:32187653-32187672 | None:intergenic | 25.0% |
| !!! | AAAATTGTTGTTTTGTCCAT+CGG | - | chr1_4:32187716-32187735 | Msa0160160:intron | 25.0% |
| !!! | TTTTAATTTACGATGCAAGT+AGG | - | chr1_4:32187850-32187869 | Msa0160160:CDS | 25.0% |
| ! | AGTATTATTGATGCTCAAAA+AGG | - | chr1_4:32187876-32187895 | Msa0160160:CDS | 25.0% |
| ! | GTATTATTGATGCTCAAAAA+GGG | - | chr1_4:32187877-32187896 | Msa0160160:CDS | 25.0% |
| ! | AAATCAAATACAGCACAAAA+AGG | - | chr1_4:32188018-32188037 | Msa0160160:intron | 25.0% |
| ! | TAGATAAGTAAGCAAATGTT+TGG | - | chr1_4:32188246-32188265 | Msa0160160:intron | 25.0% |
| !! | ACTTCTAAAAATCTCACTTA+GGG | + | chr1_4:32188307-32188326 | None:intergenic | 25.0% |
| !! | AACTTCTAAAAATCTCACTT+AGG | + | chr1_4:32188308-32188327 | None:intergenic | 25.0% |
| ! | CATGTCTATAATATGGTTTA+GGG | - | chr1_4:32188406-32188425 | Msa0160160:intron | 25.0% |
| !! | TTTAGGGTTATATATGTCTA+TGG | - | chr1_4:32188422-32188441 | Msa0160160:intron | 25.0% |
| ! | GTGATCAATAAAAGAATCAA+AGG | - | chr1_4:32188562-32188581 | Msa0160160:intron | 25.0% |
| ! | TGAACTTATATACCTGAAAA+TGG | - | chr1_4:32188735-32188754 | Msa0160160:intron | 25.0% |
| !!! | ACTATTTGGGTTTGTTAATT+TGG | - | chr1_4:32188817-32188836 | Msa0160160:intron | 25.0% |
| !!! | CTATTTGGGTTTGTTAATTT+GGG | - | chr1_4:32188818-32188837 | Msa0160160:intron | 25.0% |
| ! | TAGCAAAAAACAATGATTTG+AGG | + | chr1_4:32188938-32188957 | None:intergenic | 25.0% |
| !! | GAGTTTTTCTATCAAAACAA+TGG | + | chr1_4:32189016-32189035 | None:intergenic | 25.0% |
| ! | TAAATACAGTCAAAAAACCT+CGG | - | chr1_4:32189106-32189125 | Msa0160160:CDS | 25.0% |
| ! | ACATAATTGAAAGTCAGAAA+TGG | + | chr1_4:32189573-32189592 | None:intergenic | 25.0% |
| ! | TACAACATATTCTGTTGTTA+TGG | + | chr1_4:32189644-32189663 | None:intergenic | 25.0% |
| !! | AGCTAGTTGAAACTTTAAAA+TGG | - | chr1_4:32189873-32189892 | Msa0160160:intron | 25.0% |
| ! | AATATTCATCTGTCAATACA+TGG | + | chr1_4:32189919-32189938 | None:intergenic | 25.0% |
| ! | GCACAAAAAAAAAATACCTA+TGG | - | chr1_4:32190052-32190071 | Msa0160160:intron | 25.0% |
| !! | TTGATAGTTTGAGCAATTAA+GGG | - | chr1_4:32190086-32190105 | Msa0160160:intron | 25.0% |
| !!! | AAGGTTGTGGATTGTTTTTT+GGG | + | chr1_4:32184420-32184439 | None:intergenic | 30.0% |
| ATGAAAGGATGCATACATTT+GGG | + | chr1_4:32184618-32184637 | None:intergenic | 30.0% | |
| AATGAAAGGATGCATACATT+TGG | + | chr1_4:32184619-32184638 | None:intergenic | 30.0% | |
| GTTTAGAGAATTTGATTGGA+TGG | - | chr1_4:32185008-32185027 | Msa0160160:intron | 30.0% | |
| !!! | GCTGTTTTTACAAGTTATTG+TGG | - | chr1_4:32185066-32185085 | Msa0160160:intron | 30.0% |
| ! | TCTGTTTTCACAAGCTATTA+TGG | - | chr1_4:32185175-32185194 | Msa0160160:intron | 30.0% |
| !! | CTATTTTTCACAACCTATTG+TGG | - | chr1_4:32185246-32185265 | Msa0160160:CDS | 30.0% |
| !! | GAAGTGTGTGTTTTAAATTG+TGG | - | chr1_4:32185473-32185492 | Msa0160160:intron | 30.0% |
| ATTCAAAGAAGAAGAGAAAG+CGG | - | chr1_4:32185503-32185522 | Msa0160160:intron | 30.0% | |
| AAAAAGGAAAAGGAAGTTGT+TGG | - | chr1_4:32185546-32185565 | Msa0160160:intron | 30.0% | |
| TGTTGAGTTATGTTTGTATG+AGG | - | chr1_4:32185836-32185855 | Msa0160160:intron | 30.0% | |
| TGAGACATTGAATTGATTGT+TGG | - | chr1_4:32185990-32186009 | Msa0160160:intron | 30.0% | |
| !! | TTGTTTTGTTGAACTGATAC+TGG | - | chr1_4:32186078-32186097 | Msa0160160:intron | 30.0% |
| TAGTCTTCATTTGTACAACT+AGG | + | chr1_4:32186134-32186153 | None:intergenic | 30.0% | |
| !! | AGTTTATACTTTTTGAGAGC+TGG | - | chr1_4:32186159-32186178 | Msa0160160:intron | 30.0% |
| ! | ACTTTGTTGCCTTTATTTCT+AGG | + | chr1_4:32186324-32186343 | None:intergenic | 30.0% |
| TGCAATACTGAAGTATAAAG+TGG | - | chr1_4:32186345-32186364 | Msa0160160:intron | 30.0% | |
| !! | CTACAAACTAGTTTGGATTT+TGG | - | chr1_4:32186373-32186392 | Msa0160160:intron | 30.0% |
| TTGTTTATGATCCTGTAGAA+GGG | - | chr1_4:32186619-32186638 | Msa0160160:intron | 30.0% | |
| !! | TGTAGACTTTTTGAAGAATC+GGG | - | chr1_4:32186789-32186808 | Msa0160160:intron | 30.0% |
| CTATATTGCTACGTTTATCT+GGG | + | chr1_4:32186885-32186904 | None:intergenic | 30.0% | |
| !! | CTTTCTAAAACACACAAAAC+AGG | + | chr1_4:32187090-32187109 | None:intergenic | 30.0% |
| !!! | CTGTTTTGTGTGTTTTAGAA+AGG | - | chr1_4:32187088-32187107 | Msa0160160:intron | 30.0% |
| !!! | GTTTTGTGTGTTTTAGAAAG+GGG | - | chr1_4:32187090-32187109 | Msa0160160:intron | 30.0% |
| CTCAAGTTAAACAGATTTCA+GGG | + | chr1_4:32187183-32187202 | None:intergenic | 30.0% | |
| ACTCAAGTTAAACAGATTTC+AGG | + | chr1_4:32187184-32187203 | None:intergenic | 30.0% | |
| !! | GTTTAGTGCAAATTGACTTT+TGG | - | chr1_4:32187206-32187225 | Msa0160160:CDS | 30.0% |
| CATCTTAGCATTACATGAAA+AGG | + | chr1_4:32187264-32187283 | None:intergenic | 30.0% | |
| !!! | TTCTTGTTTTTATGCAGTGA+AGG | - | chr1_4:32187393-32187412 | Msa0160160:intron | 30.0% |
| TGCAAATAGAGATATAGCAA+AGG | - | chr1_4:32187482-32187501 | Msa0160160:intron | 30.0% | |
| GCAAATAGAGATATAGCAAA+GGG | - | chr1_4:32187483-32187502 | Msa0160160:intron | 30.0% | |
| AGGTTGTATTATGACTACAA+TGG | - | chr1_4:32187510-32187529 | Msa0160160:intron | 30.0% | |
| ! | AGTTGATTCAATTGTATCTC+TGG | - | chr1_4:32187664-32187683 | Msa0160160:intron | 30.0% |
| GCATGTCTATAATATGGTTT+AGG | - | chr1_4:32188405-32188424 | Msa0160160:intron | 30.0% | |
| TTATATATGTCTATGGTCCA+CGG | - | chr1_4:32188429-32188448 | Msa0160160:intron | 30.0% | |
| TTTATTGAGTACTAAACAGC+TGG | - | chr1_4:32188480-32188499 | Msa0160160:intron | 30.0% | |
| AAATCATCACTCAGAACAAA+CGG | + | chr1_4:32188646-32188665 | None:intergenic | 30.0% | |
| ! | TTCTGAGTGATGATTTTAAG+AGG | - | chr1_4:32188650-32188669 | Msa0160160:intron | 30.0% |
| TAGTTTCTCAATATTCAGGT+AGG | + | chr1_4:32188971-32188990 | None:intergenic | 30.0% | |
| !! | CTTCTAGTTTCTCAATATTC+AGG | + | chr1_4:32188975-32188994 | None:intergenic | 30.0% |
| ATTTGTTTGCCTTTATGTTG+TGG | + | chr1_4:32189043-32189062 | None:intergenic | 30.0% | |
| TTATTAAGCTATTGCTTGCA+TGG | + | chr1_4:32189186-32189205 | None:intergenic | 30.0% | |
| TGGTTCTCTATAAACTAGTT+TGG | - | chr1_4:32189257-32189276 | Msa0160160:intron | 30.0% | |
| GATGCAAGTTTGTATATTTC+AGG | - | chr1_4:32189402-32189421 | Msa0160160:intron | 30.0% | |
| !!! | TTGTTTTTGATCCTGTAGAA+GGG | - | chr1_4:32189503-32189522 | Msa0160160:intron | 30.0% |
| ATAAATACTTACCCTTCTAC+AGG | + | chr1_4:32189517-32189536 | None:intergenic | 30.0% | |
| !!! | TGGTTGTTTTGTTTATGTGT+TGG | - | chr1_4:32189893-32189912 | Msa0160160:intron | 30.0% |
| ATTAAATATGCTCTGCAAGT+AGG | - | chr1_4:32189966-32189985 | Msa0160160:intron | 30.0% | |
| !! | TTTCTCATTTTGGTGATTTC+TGG | - | chr1_4:32189996-32190015 | Msa0160160:intron | 30.0% |
| ! | CTTGATAGTTTGAGCAATTA+AGG | - | chr1_4:32190085-32190104 | Msa0160160:intron | 30.0% |
| TGATAGTTTGAGCAATTAAG+GGG | - | chr1_4:32190087-32190106 | Msa0160160:intron | 30.0% | |
| !!! | TGAAGTTTGAGGGTTTTTTT+GGG | + | chr1_4:32190230-32190249 | None:intergenic | 30.0% |
| !!! | GAAGGTTGTGGATTGTTTTT+TGG | + | chr1_4:32184421-32184440 | None:intergenic | 35.0% |
| AAGAGGATTTAGGTACAGAA+GGG | + | chr1_4:32184560-32184579 | None:intergenic | 35.0% | |
| ! | TGCATACATTTGGGGATTTT+GGG | + | chr1_4:32184609-32184628 | None:intergenic | 35.0% |
| ! | ATGCATACATTTGGGGATTT+TGG | + | chr1_4:32184610-32184629 | None:intergenic | 35.0% |
| TGAAAGGATGCATACATTTG+GGG | + | chr1_4:32184617-32184636 | None:intergenic | 35.0% | |
| CATTTCAATACGTCAGTGTT+TGG | - | chr1_4:32184650-32184669 | Msa0160160:intron | 35.0% | |
| TCTATTGACGTTATGCTGTT+TGG | - | chr1_4:32184852-32184871 | Msa0160160:intron | 35.0% | |
| ! | CTATTGACGTTATGCTGTTT+GGG | - | chr1_4:32184853-32184872 | Msa0160160:intron | 35.0% |
| CAGAATCTTAGATGCATCAA+CGG | + | chr1_4:32184937-32184956 | None:intergenic | 35.0% | |
| ! | GCATCTAAGATTCTGAATCA+TGG | - | chr1_4:32184942-32184961 | Msa0160160:intron | 35.0% |
| GAGAATTTGATTGGATGGAT+TGG | - | chr1_4:32185013-32185032 | Msa0160160:intron | 35.0% | |
| !! | TTTGATTGGATGGATTGGTT+TGG | - | chr1_4:32185018-32185037 | Msa0160160:intron | 35.0% |
| !! | TTGATTGGATGGATTGGTTT+GGG | - | chr1_4:32185019-32185038 | Msa0160160:intron | 35.0% |
| !! | GCTGTTTTCATAAGCTAATG+TGG | - | chr1_4:32185135-32185154 | Msa0160160:intron | 35.0% |
| ! | ACAATAGCTTGTGAAAACAG+TGG | + | chr1_4:32185306-32185325 | None:intergenic | 35.0% |
| ! | GTAGTTTGGTGGTTTCAAAA+AGG | - | chr1_4:32185530-32185549 | Msa0160160:intron | 35.0% |
| TGGTGGTTTCAAAAAGGAAA+AGG | - | chr1_4:32185536-32185555 | Msa0160160:intron | 35.0% | |
| TGCCAAATGATGATTTGAAG+AGG | - | chr1_4:32185575-32185594 | Msa0160160:intron | 35.0% | |
| CTCCTCTTCAAATCATCATT+TGG | + | chr1_4:32185580-32185599 | None:intergenic | 35.0% | |
| GACATTGAATTGATTGTTGG+TGG | - | chr1_4:32185993-32186012 | Msa0160160:intron | 35.0% | |
| ! | TTGTTGAACTGATACTGGTT+AGG | - | chr1_4:32186083-32186102 | Msa0160160:intron | 35.0% |
| !! | TTATACTTTTTGAGAGCTGG+TGG | - | chr1_4:32186162-32186181 | Msa0160160:intron | 35.0% |
| TAATACAAGCGCAATGTCTT+TGG | - | chr1_4:32186212-32186231 | Msa0160160:intron | 35.0% | |
| TCTCAACTTATGCTCAATGT+AGG | - | chr1_4:32186237-32186256 | Msa0160160:intron | 35.0% | |
| GCAGTGTTACCTAGAAATAA+AGG | - | chr1_4:32186312-32186331 | Msa0160160:intron | 35.0% | |
| CTGCACTATTTGTCATGATT+TGG | - | chr1_4:32186400-32186419 | Msa0160160:intron | 35.0% | |
| GCTCTGATAATCTGATTAAG+TGG | + | chr1_4:32186450-32186469 | None:intergenic | 35.0% | |
| ! | TAACTTGTGCAGAAGTATGA+TGG | - | chr1_4:32186569-32186588 | Msa0160160:intron | 35.0% |
| AGGATCATAAACAACCATGA+GGG | + | chr1_4:32186613-32186632 | None:intergenic | 35.0% | |
| GTTGTTTATGATCCTGTAGA+AGG | - | chr1_4:32186618-32186637 | Msa0160160:intron | 35.0% | |
| ATAAGTACTTACCCTTCTAC+AGG | + | chr1_4:32186633-32186652 | None:intergenic | 35.0% | |
| AAGAATCGGGAATATGATGA+TGG | - | chr1_4:32186802-32186821 | Msa0160160:intron | 35.0% | |
| GCTATATTGCTACGTTTATC+TGG | + | chr1_4:32186886-32186905 | None:intergenic | 35.0% | |
| CATTATATCTCACGCATTTC+AGG | + | chr1_4:32187434-32187453 | None:intergenic | 35.0% | |
| TGCGTGAGATATAATGTTGA+TGG | - | chr1_4:32187438-32187457 | Msa0160160:intron | 35.0% | |
| !! | GTCATATTTTGTGAAGCACT+TGG | + | chr1_4:32188095-32188114 | None:intergenic | 35.0% |
| TTGCATCCATATCTTGTACT+AGG | - | chr1_4:32188157-32188176 | Msa0160160:CDS | 35.0% | |
| TGCATCCATATCTTGTACTA+GGG | - | chr1_4:32188158-32188177 | Msa0160160:CDS | 35.0% | |
| AAACACCCTAGTACAAGATA+TGG | + | chr1_4:32188166-32188185 | None:intergenic | 35.0% | |
| AACAAACATTACCGCAGATA+TGG | + | chr1_4:32188223-32188242 | None:intergenic | 35.0% | |
| TAAGCAAATGTTTGGTTGAG+TGG | - | chr1_4:32188254-32188273 | Msa0160160:intron | 35.0% | |
| ! | TACTTAGGACTTGTGGTTTT+TGG | - | chr1_4:32188455-32188474 | Msa0160160:intron | 35.0% |
| ATTAGAGTAGATGCCTTCAT+TGG | - | chr1_4:32188675-32188694 | Msa0160160:intron | 35.0% | |
| ATAAACCCTACAACAAACCA+TGG | + | chr1_4:32188910-32188929 | None:intergenic | 35.0% | |
| TTGCAACACTGAAGTATAAG+TGG | - | chr1_4:32189237-32189256 | Msa0160160:intron | 35.0% | |
| ! | AAACATGTGCAGAAGTATGA+TGG | - | chr1_4:32189453-32189472 | Msa0160160:intron | 35.0% |
| AGGATCAAAAACAACCATGA+GGG | + | chr1_4:32189497-32189516 | None:intergenic | 35.0% | |
| !!! | GTTGTTTTTGATCCTGTAGA+AGG | - | chr1_4:32189502-32189521 | Msa0160160:intron | 35.0% |
| AGGGTAAGTATTTATGCAAC+TGG | - | chr1_4:32189522-32189541 | Msa0160160:intron | 35.0% | |
| !! | TGTTATGGTCGACTCTTTTA+TGG | + | chr1_4:32189629-32189648 | None:intergenic | 35.0% |
| CTATCTACGTCGTCATATTA+CGG | + | chr1_4:32189688-32189707 | None:intergenic | 35.0% | |
| CTATGTTGCCATGTTTATCT+GGG | + | chr1_4:32189762-32189781 | None:intergenic | 35.0% | |
| ! | AGGTGCTCAATTTCTCATTT+TGG | - | chr1_4:32189986-32190005 | Msa0160160:intron | 35.0% |
| !! | TTTGTGCTTAAAAGCACTAC+TGG | + | chr1_4:32190039-32190058 | None:intergenic | 35.0% |
| GATAGTTTGAGCAATTAAGG+GGG | - | chr1_4:32190088-32190107 | Msa0160160:intron | 35.0% | |
| ATAGTTTGAGCAATTAAGGG+GGG | - | chr1_4:32190089-32190108 | Msa0160160:intron | 35.0% | |
| TCAATGAAGCCATGAGATTT+GGG | + | chr1_4:32190175-32190194 | None:intergenic | 35.0% | |
| !!! | CTGAAGTTTGAGGGTTTTTT+TGG | + | chr1_4:32190231-32190250 | None:intergenic | 35.0% |
| AAAGAGGAGATTAGAACAGA+TGG | - | chr1_4:32190280-32190299 | Msa0160160:CDS | 35.0% | |
| GCAAAGAAGCAACTTAGTTG+GGG | + | chr1_4:32184490-32184509 | None:intergenic | 40.0% | |
| CGCAAAGAAGCAACTTAGTT+GGG | + | chr1_4:32184491-32184510 | None:intergenic | 40.0% | |
| TCGCAAAGAAGCAACTTAGT+TGG | + | chr1_4:32184492-32184511 | None:intergenic | 40.0% | |
| ! | TTAGGTACAGAAGGGAGTAT+AGG | + | chr1_4:32184552-32184571 | None:intergenic | 40.0% |
| CAAGAGGATTTAGGTACAGA+AGG | + | chr1_4:32184561-32184580 | None:intergenic | 40.0% | |
| CTTCTGTACCTAAATCCTCT+TGG | - | chr1_4:32184559-32184578 | Msa0160160:CDS | 40.0% | |
| ! | GCATACATTTGGGGATTTTG+GGG | + | chr1_4:32184608-32184627 | None:intergenic | 40.0% |
| TGGTATCACAGTGAGTTTGT+CGG | - | chr1_4:32184670-32184689 | Msa0160160:intron | 40.0% | |
| TTGGTATCAGAGCGAATTTG+TGG | + | chr1_4:32184701-32184720 | None:intergenic | 40.0% | |
| ACCAAACATTCACAACACCT+AGG | - | chr1_4:32184716-32184735 | Msa0160160:intron | 40.0% | |
| CCAAACATTCACAACACCTA+GGG | - | chr1_4:32184717-32184736 | Msa0160160:intron | 40.0% | |
| ! | ATTAGAGTATTCACGACCCT+AGG | + | chr1_4:32184736-32184755 | None:intergenic | 40.0% |
| TTTCACATGCTCTCCACAAT+AGG | + | chr1_4:32185262-32185281 | None:intergenic | 40.0% | |
| ! | TAGCTTGTGAAAACAGTGGA+TGG | + | chr1_4:32185302-32185321 | None:intergenic | 40.0% |
| GAAGAGGAGATTAGAACAGA+TGG | - | chr1_4:32185591-32185610 | Msa0160160:intron | 40.0% | |
| ACGTTCAAGAACAGGAGAAT+TGG | + | chr1_4:32185701-32185720 | None:intergenic | 40.0% | |
| AATTCTCCTGTTCTTGAACG+TGG | - | chr1_4:32185700-32185719 | Msa0160160:intron | 40.0% | |
| TCTAGGTAACACTGCATACT+AGG | + | chr1_4:32186307-32186326 | None:intergenic | 40.0% | |
| GGTCTGTCTACAAACTAGTT+TGG | - | chr1_4:32186366-32186385 | Msa0160160:intron | 40.0% | |
| TCTGCACAAGTTAAGAGTCT+CGG | + | chr1_4:32186562-32186581 | None:intergenic | 40.0% | |
| ! | TGCAGAAGTATGATGGAAAG+AGG | - | chr1_4:32186576-32186595 | Msa0160160:intron | 40.0% |
| GGATCATAAACAACCATGAG+GGG | + | chr1_4:32186612-32186631 | None:intergenic | 40.0% | |
| CAGGATCATAAACAACCATG+AGG | + | chr1_4:32186614-32186633 | None:intergenic | 40.0% | |
| TTCTAATCCTTCACAGTCAC+TGG | - | chr1_4:32186852-32186871 | Msa0160160:intron | 40.0% | |
| GAATAGCACTAATATCCACC+TGG | - | chr1_4:32187238-32187257 | Msa0160160:CDS | 40.0% | |
| TAGCATTACATGAAAAGGCC+AGG | + | chr1_4:32187259-32187278 | None:intergenic | 40.0% | |
| GAGATATAGCAAAGGGAGAA+AGG | - | chr1_4:32187490-32187509 | Msa0160160:intron | 40.0% | |
| !!! | TTGTTGTTTTGTCCATCGGT+TGG | - | chr1_4:32187720-32187739 | Msa0160160:intron | 40.0% |
| !!! | TGTTGTTTTGTCCATCGGTT+GGG | - | chr1_4:32187721-32187740 | Msa0160160:intron | 40.0% |
| TCTACCTCTTCTATGCCAAA+CGG | - | chr1_4:32187789-32187808 | Msa0160160:intron | 40.0% | |
| ATATCCGTTTGGCATAGAAG+AGG | + | chr1_4:32187796-32187815 | None:intergenic | 40.0% | |
| GATGCAATCACACATTGCAT+TGG | + | chr1_4:32188144-32188163 | None:intergenic | 40.0% | |
| AAACATTACCGCAGATATGG+AGG | + | chr1_4:32188220-32188239 | None:intergenic | 40.0% | |
| TATGGTCCACGGTAATACTT+AGG | - | chr1_4:32188440-32188459 | Msa0160160:intron | 40.0% | |
| ACAAGTCCTAAGTATTACCG+TGG | + | chr1_4:32188449-32188468 | None:intergenic | 40.0% | |
| ACGGTAATACTTAGGACTTG+TGG | - | chr1_4:32188448-32188467 | Msa0160160:intron | 40.0% | |
| AGCTGGATTGTCTCTCTTAA+TGG | - | chr1_4:32188497-32188516 | Msa0160160:intron | 40.0% | |
| !!! | ATCTCTTTGGTGCCATTTTC+AGG | + | chr1_4:32188750-32188769 | None:intergenic | 40.0% |
| CAGGAGAATTAGCATCTCTT+TGG | + | chr1_4:32188763-32188782 | None:intergenic | 40.0% | |
| AATTCTCCTGCTCTTGAACA+TGG | - | chr1_4:32188773-32188792 | Msa0160160:intron | 40.0% | |
| TACAGCAGAAACACATTGAC+AGG | + | chr1_4:32188880-32188899 | None:intergenic | 40.0% | |
| !! | AATTCGCCATGGTTTGTTGT+AGG | - | chr1_4:32188901-32188920 | Msa0160160:intron | 40.0% |
| !! | ATTCGCCATGGTTTGTTGTA+GGG | - | chr1_4:32188902-32188921 | Msa0160160:intron | 40.0% |
| AACTCAGTGCCACAACATAA+AGG | - | chr1_4:32189031-32189050 | Msa0160160:CDS | 40.0% | |
| ! | AAGCATAAGTTGAAAAGCCG+AGG | + | chr1_4:32189126-32189145 | None:intergenic | 40.0% |
| ATGCGCTATTCGTCATGATT+TGG | - | chr1_4:32189291-32189310 | Msa0160160:intron | 40.0% | |
| ! | TCTGCACATGTTTAGAGTCT+CGG | + | chr1_4:32189446-32189465 | None:intergenic | 40.0% |
| ! | TGCAGAAGTATGATGGAAAG+AGG | - | chr1_4:32186576-32186595 | Msa0160160:intron | 40.0% |
| GGATCAAAAACAACCATGAG+GGG | + | chr1_4:32189496-32189515 | None:intergenic | 40.0% | |
| CAGGATCAAAAACAACCATG+AGG | + | chr1_4:32189498-32189517 | None:intergenic | 40.0% | |
| ATCTAATCCTTCATGATCGC+TGG | - | chr1_4:32189729-32189748 | Msa0160160:intron | 40.0% | |
| GCTATGTTGCCATGTTTATC+TGG | + | chr1_4:32189763-32189782 | None:intergenic | 40.0% | |
| CAACATAGCACGTTCATTAG+AGG | - | chr1_4:32189774-32189793 | Msa0160160:intron | 40.0% | |
| !! | TAGAGGCATCAACAATACTC+AGG | - | chr1_4:32189791-32189810 | Msa0160160:intron | 40.0% |
| AATACTCAGGCATGATCTGA+AGG | - | chr1_4:32189804-32189823 | Msa0160160:intron | 40.0% | |
| CAACTAGCTGTCAATGACAA+AGG | + | chr1_4:32189862-32189881 | None:intergenic | 40.0% | |
| !! | TTTGGTGATTTCTGGCCATT+TGG | - | chr1_4:32190004-32190023 | Msa0160160:intron | 40.0% |
| !! | TTGGTGATTTCTGGCCATTT+GGG | - | chr1_4:32190005-32190024 | Msa0160160:intron | 40.0% |
| TACTGGAGATATCTCCCAAA+TGG | + | chr1_4:32190022-32190041 | None:intergenic | 40.0% | |
| ATCAAGTCATAACTCCCCAT+AGG | + | chr1_4:32190071-32190090 | None:intergenic | 40.0% | |
| TAGTTTGAGCAATTAAGGGG+GGG | - | chr1_4:32190090-32190109 | Msa0160160:intron | 40.0% | |
| ! | AGATTTGGGATGTGAGAACA+GGG | + | chr1_4:32190161-32190180 | None:intergenic | 40.0% |
| TTCTCACATCCCAAATCTCA+TGG | - | chr1_4:32190163-32190182 | Msa0160160:CDS | 40.0% | |
| CTCAATGAAGCCATGAGATT+TGG | + | chr1_4:32190176-32190195 | None:intergenic | 40.0% | |
| !!! | GTTTTTTTGGGAGCTGGAAT+TGG | + | chr1_4:32190218-32190237 | None:intergenic | 40.0% |
| ! | AGCGTTGAGTGCAACTAAAA+CGG | - | chr1_4:32190316-32190335 | Msa0160160:CDS | 40.0% |
| TGGGAGCTGGAATTCTTCTT+CGG | + | chr1_4:32184401-32184420 | None:intergenic | 45.0% | |
| !!! | GTGGATTGTTTTTTGGGAGC+TGG | + | chr1_4:32184414-32184433 | None:intergenic | 45.0% |
| GTCATCATCGTTGAAGGTTG+TGG | + | chr1_4:32184433-32184452 | None:intergenic | 45.0% | |
| GTTTGCCAGAAATGCAACTC+CGG | - | chr1_4:32184459-32184478 | Msa0160160:CDS | 45.0% | |
| ATTTGCCGGAGTTGCATTTC+TGG | + | chr1_4:32184467-32184486 | None:intergenic | 45.0% | |
| CAACTTAGTTGGGGATTTGC+CGG | + | chr1_4:32184481-32184500 | None:intergenic | 45.0% | |
| CTTTGCGACAATTGCGACAA+CGG | - | chr1_4:32184504-32184523 | Msa0160160:CDS | 45.0% | |
| GGGCAAAACCAAGAGGATTT+AGG | + | chr1_4:32184570-32184589 | None:intergenic | 45.0% | |
| ! | CCCTAGGTGTTGTGAATGTT+TGG | + | chr1_4:32184720-32184739 | None:intergenic | 45.0% |
| GAGAAAGCGGAGTAGTAGTT+TGG | - | chr1_4:32185516-32185535 | Msa0160160:intron | 45.0% | |
| AAAGCGGAGTAGTAGTTTGG+TGG | - | chr1_4:32185519-32185538 | Msa0160160:intron | 45.0% | |
| ATTAGAACAGATGGCGTCGT+TGG | - | chr1_4:32185600-32185619 | Msa0160160:intron | 45.0% | |
| !! | CGTTTTAGTAGCAGTCAACG+CGG | + | chr1_4:32185629-32185648 | None:intergenic | 45.0% |
| !! | CGCGTTGACTGCTACTAAAA+CGG | - | chr1_4:32185627-32185646 | Msa0160160:intron | 45.0% |
| AATGAGCTTACGTACATGCC+TGG | - | chr1_4:32185658-32185677 | Msa0160160:intron | 45.0% | |
| ATTCCTCCACGTTCAAGAAC+AGG | + | chr1_4:32185709-32185728 | None:intergenic | 45.0% | |
| TTGCATCTCAGTGTGCATGT+TGG | - | chr1_4:32185805-32185824 | Msa0160160:intron | 45.0% | |
| ! | CAGTGTGCATGTTGGTTGTT+TGG | - | chr1_4:32185813-32185832 | Msa0160160:intron | 45.0% |
| ATGTTGCCTCTTTGTCGTCA+TGG | - | chr1_4:32185958-32185977 | Msa0160160:intron | 45.0% | |
| TCTTAGCCATGACGACAAAG+AGG | + | chr1_4:32185967-32185986 | None:intergenic | 45.0% | |
| TCATAAACAACCATGAGGGG+CGG | + | chr1_4:32186609-32186628 | None:intergenic | 45.0% | |
| CATTACATGAAAAGGCCAGG+TGG | + | chr1_4:32187256-32187275 | None:intergenic | 45.0% | |
| AACTTTACATGCCCAACCGA+TGG | + | chr1_4:32187735-32187754 | None:intergenic | 45.0% | |
| ATATGGAGGAACACCAACCA+GGG | + | chr1_4:32188206-32188225 | None:intergenic | 45.0% | |
| ! | TTGGTGTTCCTCCATATCTG+CGG | - | chr1_4:32188209-32188228 | Msa0160160:intron | 45.0% |
| TTAGGGAACTCTAGACTCAG+TGG | + | chr1_4:32188290-32188309 | None:intergenic | 45.0% | |
| ATTCCTCCATGTTCAAGAGC+AGG | + | chr1_4:32188782-32188801 | None:intergenic | 45.0% | |
| TTCTGCTGTAGAATTCGCCA+TGG | - | chr1_4:32188890-32188909 | Msa0160160:intron | 45.0% | |
| AGCTGACAGCTTAACTAGAC+GGG | + | chr1_4:32189158-32189177 | None:intergenic | 45.0% | |
| CAGCTGACAGCTTAACTAGA+CGG | + | chr1_4:32189159-32189178 | None:intergenic | 45.0% | |
| TCAAAAACAACCATGAGGGG+CGG | + | chr1_4:32189493-32189512 | None:intergenic | 45.0% | |
| GTCATCTGCCCAGATAAACA+TGG | - | chr1_4:32189751-32189770 | Msa0160160:intron | 45.0% | |
| !! | TCTGAAGGAGCATTGGAGAT+TGG | - | chr1_4:32189819-32189838 | Msa0160160:intron | 45.0% |
| ! | GATTTGGGATGTGAGAACAG+GGG | + | chr1_4:32190160-32190179 | None:intergenic | 45.0% |
| ! | GAGATTTGGGATGTGAGAAC+AGG | + | chr1_4:32190162-32190181 | None:intergenic | 45.0% |
| !!! | TTGAGGGTTTTTTTGGGAGC+TGG | + | chr1_4:32190224-32190243 | None:intergenic | 45.0% |
| CAGCAACAGCTGAAGTTTGA+GGG | + | chr1_4:32190240-32190259 | None:intergenic | 45.0% | |
| ACAGCAACAGCTGAAGTTTG+AGG | + | chr1_4:32190241-32190260 | None:intergenic | 45.0% | |
| TGCCAGGTGATGATTCAAAG+AGG | - | chr1_4:32190264-32190283 | Msa0160160:CDS | 45.0% | |
| CTCCTCTTTGAATCATCACC+TGG | + | chr1_4:32190269-32190288 | None:intergenic | 45.0% | |
| !! | ATATTATATTATTGTATTTA+GGG | + | chr1_4:32186995-32187014 | None:intergenic | 5.0% |
| !! | TATATTATATTATTGTATTT+AGG | + | chr1_4:32186996-32187015 | None:intergenic | 5.0% |
| GGAATTCTTCTTCGGCGAAG+TGG | + | chr1_4:32184393-32184412 | None:intergenic | 50.0% | |
| GACGTCGTCATCATCGTTGA+AGG | + | chr1_4:32184439-32184458 | None:intergenic | 50.0% | |
| TAGGTGTGAGGCAGAAGAGA+TGG | + | chr1_4:32184533-32184552 | None:intergenic | 50.0% | |
| ! | CAGAAGGGAGTATAGGTGTG+AGG | + | chr1_4:32184545-32184564 | None:intergenic | 50.0% |
| !!! | GATTTTGGGGTTGTGAGAGC+AGG | + | chr1_4:32184595-32184614 | None:intergenic | 50.0% |
| GCTTACGTACATGCCTGGAA+TGG | - | chr1_4:32185663-32185682 | Msa0160160:intron | 50.0% | |
| ACAGGAGAATTGGCATCCCT+TGG | + | chr1_4:32185691-32185710 | None:intergenic | 50.0% | |
| TCTCCTGTTCTTGAACGTGG+AGG | - | chr1_4:32185703-32185722 | Msa0160160:intron | 50.0% | |
| TCTTGAACGTGGAGGAATGC+AGG | - | chr1_4:32185711-32185730 | Msa0160160:intron | 50.0% | |
| CAGATGACCAGTGACTGTGA+AGG | + | chr1_4:32186862-32186881 | None:intergenic | 50.0% | |
| CTAAGTGTTAGACTCTGCCC+TGG | - | chr1_4:32188186-32188205 | Msa0160160:intron | 50.0% | |
| GATATGGAGGAACACCAACC+AGG | + | chr1_4:32188207-32188226 | None:intergenic | 50.0% | |
| CAAACGGCAGCAGCTTCTTA+TGG | + | chr1_4:32188630-32188649 | None:intergenic | 50.0% | |
| GTCAACGCTCTTGCCAATGA+AGG | + | chr1_4:32188691-32188710 | None:intergenic | 50.0% | |
| TCTCCTGCTCTTGAACATGG+AGG | - | chr1_4:32188776-32188795 | Msa0160160:intron | 50.0% | |
| CAGATGACCAGCGATCATGA+AGG | + | chr1_4:32189739-32189758 | None:intergenic | 50.0% | |
| ! | GGCATGATCTGAAGGAGCAT+TGG | - | chr1_4:32189812-32189831 | Msa0160160:intron | 50.0% |
| GCAGGAAGGGCAAAACCAAG+AGG | + | chr1_4:32184577-32184596 | None:intergenic | 55.0% | |
| TGGGGTTGTGAGAGCAGGAA+GGG | + | chr1_4:32184590-32184609 | None:intergenic | 55.0% | |
| TTGGGGTTGTGAGAGCAGGA+AGG | + | chr1_4:32184591-32184610 | None:intergenic | 55.0% | |
| GTGTTAGACTCTGCCCTGGT+TGG | - | chr1_4:32188190-32188209 | Msa0160160:intron | 55.0% | |
| CGGCAGCAGCTTCTTATGGA+AGG | + | chr1_4:32188626-32188645 | None:intergenic | 55.0% | |
| !! | CAGCTGTTGCTGTTTGTGCC+AGG | - | chr1_4:32190248-32190267 | Msa0160160:CDS | 55.0% |
| ACATGCCTGGAATGGCGCCA+AGG | - | chr1_4:32185671-32185690 | Msa0160160:intron | 60.0% | |
| CATGCCTGGAATGGCGCCAA+GGG | - | chr1_4:32185672-32185691 | Msa0160160:intron | 60.0% | |
| AGGAGAATGTCCGCCCCTCA+TGG | - | chr1_4:32186596-32186615 | Msa0160160:intron | 60.0% | |
| AGGAGAATGTCCGCCCCTCA+TGG | - | chr1_4:32186596-32186615 | Msa0160160:intron | 60.0% | |
| GCATCCCTTGGCGCCATTCC+AGG | + | chr1_4:32185679-32185698 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 32184381 | 32190352 | 32184381 | ID=Msa0160160;Name=Msa0160160 |
| chr1_4 | mRNA | 32184381 | 32190352 | 32184381 | ID=Msa0160160-mRNA-1;Parent=Msa0160160;Name=Msa0160160-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0.42|0.25|1|0.57|0.37|8|0|419 |
| chr1_4 | exon | 32190153 | 32190352 | 32190153 | ID=Msa0160160-mRNA-1:exon:10185;Parent=Msa0160160-mRNA-1 |
| chr1_4 | exon | 32189001 | 32189181 | 32189001 | ID=Msa0160160-mRNA-1:exon:10184;Parent=Msa0160160-mRNA-1 |
| chr1_4 | exon | 32188093 | 32188193 | 32188093 | ID=Msa0160160-mRNA-1:exon:10183;Parent=Msa0160160-mRNA-1 |
| chr1_4 | exon | 32187795 | 32188007 | 32187795 | ID=Msa0160160-mRNA-1:exon:10182;Parent=Msa0160160-mRNA-1 |
| chr1_4 | exon | 32187170 | 32187323 | 32187170 | ID=Msa0160160-mRNA-1:exon:10181;Parent=Msa0160160-mRNA-1 |
| chr1_4 | exon | 32185209 | 32185309 | 32185209 | ID=Msa0160160-mRNA-1:exon:10180;Parent=Msa0160160-mRNA-1 |
| chr1_4 | exon | 32185067 | 32185130 | 32185067 | ID=Msa0160160-mRNA-1:exon:10179;Parent=Msa0160160-mRNA-1 |
| chr1_4 | exon | 32184381 | 32184626 | 32184381 | ID=Msa0160160-mRNA-1:exon:10178;Parent=Msa0160160-mRNA-1 |
| chr1_4 | CDS | 32190153 | 32190352 | 32190153 | ID=Msa0160160-mRNA-1:cds;Parent=Msa0160160-mRNA-1 |
| chr1_4 | CDS | 32189001 | 32189181 | 32189001 | ID=Msa0160160-mRNA-1:cds;Parent=Msa0160160-mRNA-1 |
| chr1_4 | CDS | 32188093 | 32188193 | 32188093 | ID=Msa0160160-mRNA-1:cds;Parent=Msa0160160-mRNA-1 |
| chr1_4 | CDS | 32187795 | 32188007 | 32187795 | ID=Msa0160160-mRNA-1:cds;Parent=Msa0160160-mRNA-1 |
| chr1_4 | CDS | 32187170 | 32187323 | 32187170 | ID=Msa0160160-mRNA-1:cds;Parent=Msa0160160-mRNA-1 |
| chr1_4 | CDS | 32185209 | 32185309 | 32185209 | ID=Msa0160160-mRNA-1:cds;Parent=Msa0160160-mRNA-1 |
| chr1_4 | CDS | 32185067 | 32185130 | 32185067 | ID=Msa0160160-mRNA-1:cds;Parent=Msa0160160-mRNA-1 |
| chr1_4 | CDS | 32184381 | 32184626 | 32184381 | ID=Msa0160160-mRNA-1:cds;Parent=Msa0160160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
