Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0198870 | XP_024633013.2 | 95.295 | 914 | 41 | 2 | 1 | 913 | 1 | 913 | 0.0 | 1780 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0198870 | sp|O04893|AGLU_SPIOL | 59.537 | 907 | 343 | 7 | 15 | 908 | 5 | 900 | 0.0 | 1121 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0198870 | A0A396J4F2 | 95.264 | 908 | 41 | 2 | 1 | 907 | 1 | 907 | 0.0 | 1770 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0011910 | Msa0198870 | 0.809705 | 1.658150e-50 | -8.615850e-47 |
Msa0025340 | Msa0198870 | 0.805249 | 1.462324e-49 | -8.615850e-47 |
Msa0037040 | Msa0198870 | 0.800006 | 1.764671e-48 | -8.615850e-47 |
Msa0042500 | Msa0198870 | 0.811964 | 5.378289e-51 | -8.615850e-47 |
Msa0046700 | Msa0198870 | 0.801306 | 9.584210e-49 | -8.615850e-47 |
Msa0060720 | Msa0198870 | 0.825334 | 4.961836e-54 | -8.615850e-47 |
Msa0072910 | Msa0198870 | 0.817992 | 2.472381e-52 | -8.615850e-47 |
Msa0079570 | Msa0198870 | 0.812410 | 4.299081e-51 | -8.615850e-47 |
Msa0082340 | Msa0198870 | 0.814658 | 1.376962e-51 | -8.615850e-47 |
Msa0097470 | Msa0198870 | 0.812196 | 4.787611e-51 | -8.615850e-47 |
Msa0101210 | Msa0198870 | 0.800824 | 1.202383e-48 | -8.615850e-47 |
Msa0105500 | Msa0198870 | 0.805364 | 1.383712e-49 | -8.615850e-47 |
Msa0109070 | Msa0198870 | 0.828229 | 1.009483e-54 | -8.615850e-47 |
Msa0118700 | Msa0198870 | 0.821028 | 5.020658e-53 | -8.615850e-47 |
Msa0127240 | Msa0198870 | 0.812507 | 4.094340e-51 | -8.615850e-47 |
Msa0128840 | Msa0198870 | 0.820988 | 5.125665e-53 | -8.615850e-47 |
Msa0131230 | Msa0198870 | 0.824162 | 9.370352e-54 | -8.615850e-47 |
Msa0141770 | Msa0198870 | 0.818089 | 2.350952e-52 | -8.615850e-47 |
Msa0151780 | Msa0198870 | 0.811267 | 7.626884e-51 | -8.615850e-47 |
Msa0160120 | Msa0198870 | 0.825131 | 5.541677e-54 | -8.615850e-47 |
Msa0172290 | Msa0198870 | 0.805227 | 1.477808e-49 | -8.615850e-47 |
Msa0174800 | Msa0198870 | 0.838132 | 3.447583e-57 | -8.615850e-47 |
Msa0185770 | Msa0198870 | 0.805786 | 1.127992e-49 | -8.615850e-47 |
Msa0186380 | Msa0198870 | 0.826028 | 3.396867e-54 | -8.615850e-47 |
Msa0195850 | Msa0198870 | 0.806656 | 7.399947e-50 | -8.615850e-47 |
Msa0198870 | Msa0225030 | 0.802810 | 4.700698e-49 | -8.615850e-47 |
Msa0198870 | Msa0232170 | 0.825519 | 4.485492e-54 | -8.615850e-47 |
Msa0198870 | Msa0237690 | 0.808913 | 2.451999e-50 | -8.615850e-47 |
Msa0198870 | Msa0241560 | 0.816530 | 5.275106e-52 | -8.615850e-47 |
Msa0198870 | Msa0246470 | 0.803255 | 3.803305e-49 | -8.615850e-47 |
Msa0198870 | Msa0249670 | 0.819504 | 1.122033e-52 | -8.615850e-47 |
Msa0198870 | Msa0252150 | 0.804118 | 2.518468e-49 | -8.615850e-47 |
Msa0198870 | Msa0260930 | 0.803782 | 2.957798e-49 | -8.615850e-47 |
Msa0198870 | Msa0275260 | 0.828942 | 6.790638e-55 | -8.615850e-47 |
Msa0198870 | Msa0284980 | 0.810856 | 9.361436e-51 | -8.615850e-47 |
Msa0198870 | Msa0314750 | 0.810351 | 1.203562e-50 | -8.615850e-47 |
Msa0198870 | Msa0315760 | 0.807425 | 5.086048e-50 | -8.615850e-47 |
Msa0198870 | Msa0319060 | 0.845328 | 4.349098e-59 | -8.615850e-47 |
Msa0198870 | Msa0377990 | 0.803840 | 2.876573e-49 | -8.615850e-47 |
Msa0198870 | Msa0383110 | 0.801872 | 7.333995e-49 | -8.615850e-47 |
Msa0198870 | Msa0384570 | 0.825907 | 3.629132e-54 | -8.615850e-47 |
Msa0198870 | Msa0385870 | 0.825956 | 3.532939e-54 | -8.615850e-47 |
Msa0198870 | Msa0415860 | 0.812829 | 3.482247e-51 | -8.615850e-47 |
Msa0198870 | Msa0429490 | 0.804124 | 2.510882e-49 | -8.615850e-47 |
Msa0198870 | Msa0429560 | 0.813787 | 2.144889e-51 | -8.615850e-47 |
Msa0198870 | Msa0434320 | 0.813550 | 2.418372e-51 | -8.615850e-47 |
Msa0198870 | Msa0440220 | 0.809657 | 1.697848e-50 | -8.615850e-47 |
Msa0198870 | Msa0450880 | 0.849887 | 2.423612e-60 | -8.615850e-47 |
Msa0198870 | Msa0478660 | 0.810995 | 8.734820e-51 | -8.615850e-47 |
Msa0198870 | Msa0478750 | 0.805298 | 1.428130e-49 | -8.615850e-47 |
Msa0198870 | Msa0480040 | 0.805181 | 1.511109e-49 | -8.615850e-47 |
Msa0198870 | Msa0480100 | 0.817845 | 2.669632e-52 | -8.615850e-47 |
Msa0198870 | Msa0481580 | 0.821695 | 3.521507e-53 | -8.615850e-47 |
Msa0198870 | Msa0498320 | 0.803833 | 2.885984e-49 | -8.615850e-47 |
Msa0198870 | Msa0517360 | 0.803388 | 3.569344e-49 | -8.615850e-47 |
Msa0198870 | Msa0521190 | 0.810720 | 1.001729e-50 | -8.615850e-47 |
Msa0198870 | Msa0522510 | 0.837038 | 6.579749e-57 | -8.615850e-47 |
Msa0198870 | Msa0523400 | 0.824218 | 9.093659e-54 | -8.615850e-47 |
Msa0198870 | Msa0527420 | 0.800411 | 1.459340e-48 | -8.615850e-47 |
Msa0198870 | Msa0532750 | 0.818927 | 1.518261e-52 | -8.615850e-47 |
Msa0198870 | Msa0532910 | 0.827329 | 1.661811e-54 | -8.615850e-47 |
Msa0198870 | Msa0540120 | 0.807520 | 4.856689e-50 | -8.615850e-47 |
Msa0198870 | Msa0550760 | 0.801116 | 1.047759e-48 | -8.615850e-47 |
Msa0198870 | Msa0550870 | 0.826606 | 2.473156e-54 | -8.615850e-47 |
Msa0198870 | Msa0556760 | 0.806491 | 8.017674e-50 | -8.615850e-47 |
Msa0198870 | Msa0559280 | 0.813872 | 2.054302e-51 | -8.615850e-47 |
Msa0198870 | Msa0560380 | 0.813729 | 2.208839e-51 | -8.615850e-47 |
Msa0198870 | Msa0565930 | 0.808326 | 3.272586e-50 | -8.615850e-47 |
Msa0198870 | Msa0567190 | 0.806914 | 6.525621e-50 | -8.615850e-47 |
Msa0198870 | Msa0567420 | 0.803400 | 3.550096e-49 | -8.615850e-47 |
Msa0198870 | Msa0606250 | 0.800833 | 1.196950e-48 | -8.615850e-47 |
Msa0198870 | Msa0606380 | 0.811225 | 7.788752e-51 | -8.615850e-47 |
Msa0198870 | Msa0623470 | 0.801739 | 7.811776e-49 | -8.615850e-47 |
Msa0198870 | Msa0625820 | 0.809282 | 2.043621e-50 | -8.615850e-47 |
Msa0198870 | Msa0625900 | 0.802416 | 5.667851e-49 | -8.615850e-47 |
Msa0198870 | Msa0641970 | 0.824652 | 7.186430e-54 | -8.615850e-47 |
Msa0198870 | Msa0644060 | 0.803516 | 3.358712e-49 | -8.615850e-47 |
Msa0198870 | Msa0663690 | 0.802020 | 6.840105e-49 | -8.615850e-47 |
Msa0198870 | Msa0666380 | 0.806478 | 8.066870e-50 | -8.615850e-47 |
Msa0198870 | Msa0667710 | 0.832550 | 8.865708e-56 | -8.615850e-47 |
Msa0198870 | Msa0712580 | 0.808598 | 2.863033e-50 | -8.615850e-47 |
Msa0198870 | Msa0744070 | 0.812396 | 4.329144e-51 | -8.615850e-47 |
Msa0198870 | Msa0761930 | 0.811938 | 5.450121e-51 | -8.615850e-47 |
Msa0198870 | Msa0762480 | 0.807730 | 4.382054e-50 | -8.615850e-47 |
Msa0198870 | Msa0770050 | 0.802890 | 4.525513e-49 | -8.615850e-47 |
Msa0198870 | Msa0784770 | 0.801585 | 8.400731e-49 | -8.615850e-47 |
Msa0198870 | Msa0807170 | 0.832324 | 1.008984e-55 | -8.615850e-47 |
Msa0198870 | Msa0808500 | 0.831706 | 1.433905e-55 | -8.615850e-47 |
Msa0198870 | Msa0811710 | 0.801070 | 1.070873e-48 | -8.615850e-47 |
Msa0198870 | Msa0825300 | 0.810192 | 1.302256e-50 | -8.615850e-47 |
Msa0198870 | Msa0842370 | 0.806748 | 7.076372e-50 | -8.615850e-47 |
Msa0198870 | Msa0854520 | 0.800523 | 1.384580e-48 | -8.615850e-47 |
Msa0198870 | Msa0854560 | 0.809879 | 1.521397e-50 | -8.615850e-47 |
Msa0198870 | Msa0871790 | 0.809214 | 2.113931e-50 | -8.615850e-47 |
Msa0198870 | Msa0871910 | 0.809422 | 1.906876e-50 | -8.615850e-47 |
Msa0198870 | Msa0879820 | 0.809702 | 1.660218e-50 | -8.615850e-47 |
Msa0198870 | Msa0899140 | 0.805845 | 1.096468e-49 | -8.615850e-47 |
Msa0198870 | Msa0906180 | 0.804120 | 2.515431e-49 | -8.615850e-47 |
Msa0198870 | Msa0927830 | 0.811215 | 7.827711e-51 | -8.615850e-47 |
Msa0198870 | Msa0949550 | 0.813536 | 2.436073e-51 | -8.615850e-47 |
Msa0198870 | Msa0956580 | 0.803768 | 2.977893e-49 | -8.615850e-47 |
Msa0198870 | Msa0967940 | 0.800494 | 1.404032e-48 | -8.615850e-47 |
Msa0198870 | Msa0975460 | 0.803399 | 3.550907e-49 | -8.615850e-47 |
Msa0198870 | Msa0976950 | 0.846595 | 1.967999e-59 | -8.615850e-47 |
Msa0198870 | Msa1015020 | 0.817442 | 3.291443e-52 | -8.615850e-47 |
Msa0198870 | Msa1017590 | 0.807402 | 5.144498e-50 | -8.615850e-47 |
Msa0198870 | Msa1025650 | 0.809823 | 1.564110e-50 | -8.615850e-47 |
Msa0198870 | Msa1032790 | 0.802690 | 4.978132e-49 | -8.615850e-47 |
Msa0198870 | Msa1038420 | 0.808417 | 3.129162e-50 | -8.615850e-47 |
Msa0198870 | Msa1056790 | 0.803486 | 3.407527e-49 | -8.615850e-47 |
Msa0198870 | Msa1070710 | 0.808691 | 2.734853e-50 | -8.615850e-47 |
Msa0198870 | Msa1153260 | 0.842148 | 3.086715e-58 | -8.615850e-47 |
Msa0198870 | Msa1158540 | 0.809070 | 2.268890e-50 | -8.615850e-47 |
Msa0198870 | Msa1177300 | 0.807001 | 6.255915e-50 | -8.615850e-47 |
Msa0198870 | Msa1198280 | 0.807973 | 3.890388e-50 | -8.615850e-47 |
Msa0198870 | Msa1203090 | 0.806526 | 7.881499e-50 | -8.615850e-47 |
Msa0198870 | Msa1206500 | 0.803767 | 2.979687e-49 | -8.615850e-47 |
Msa0198870 | Msa1223050 | 0.810047 | 1.399537e-50 | -8.615850e-47 |
Msa0198870 | Msa1224150 | 0.821727 | 3.462704e-53 | -8.615850e-47 |
Msa0198870 | Msa1229880 | 0.821580 | 3.744258e-53 | -8.615850e-47 |
Msa0198870 | Msa1236090 | 0.800083 | 1.702326e-48 | -8.615850e-47 |
Msa0198870 | Msa1244940 | 0.803335 | 3.660761e-49 | -8.615850e-47 |
Msa0198870 | Msa1263460 | 0.821522 | 3.860167e-53 | -8.615850e-47 |
Msa0198870 | Msa1288380 | 0.805292 | 1.432644e-49 | -8.615850e-47 |
Msa0198870 | Msa1307380 | 0.803679 | 3.106583e-49 | -8.615850e-47 |
Msa0198870 | Msa1310620 | 0.823966 | 1.042197e-53 | -8.615850e-47 |
Msa0198870 | Msa1317090 | 0.803909 | 2.783610e-49 | -8.615850e-47 |
Msa0198870 | Msa1350130 | 0.803427 | 3.505162e-49 | -8.615850e-47 |
Msa0198870 | Msa1357090 | 0.810485 | 1.126286e-50 | -8.615850e-47 |
Msa0198870 | Msa1360070 | 0.807814 | 4.204784e-50 | -8.615850e-47 |
Msa0198870 | Msa1370830 | 0.852178 | 5.474450e-61 | -8.615850e-47 |
Msa0198870 | Msa1387650 | 0.823423 | 1.396308e-53 | -8.615850e-47 |
Msa0198870 | Msa1398150 | 0.801243 | 9.872892e-49 | -8.615850e-47 |
Msa0198870 | Msa1410770 | 0.819828 | 9.463636e-53 | -8.615850e-47 |
Msa0198870 | Msa1416850 | 0.822438 | 2.369421e-53 | -8.615850e-47 |
Msa0198870 | Msa1420630 | 0.829587 | 4.736130e-55 | -8.615850e-47 |
Msa0198870 | Msa1425570 | 0.831306 | 1.798855e-55 | -8.615850e-47 |
Msa0198870 | Msa1425600 | 0.821655 | 3.597621e-53 | -8.615850e-47 |
Msa0198870 | Msa1444750 | 0.809455 | 1.876679e-50 | -8.615850e-47 |
Msa0198870 | Msa1452080 | 0.800418 | 1.455036e-48 | -8.615850e-47 |
Msa0198870 | Msa1462210 | 0.802243 | 6.154733e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0198870 | MtrunA17_Chr2g0293111 | 95.264 | 908 | 41 | 2 | 1 | 907 | 1 | 907 | 0.0 | 1770 |
Msa0198870 | MtrunA17_Chr2g0293101 | 92.881 | 913 | 64 | 1 | 1 | 913 | 1 | 912 | 0.0 | 1745 |
Msa0198870 | MtrunA17_Chr1g0209901 | 46.154 | 910 | 446 | 13 | 33 | 912 | 28 | 923 | 0.0 | 837 |
Msa0198870 | MtrunA17_Chr5g0423841 | 45.686 | 904 | 449 | 12 | 40 | 912 | 33 | 925 | 0.0 | 818 |
Msa0198870 | MtrunA17_Chr1g0209911 | 45.042 | 948 | 461 | 15 | 12 | 912 | 2 | 936 | 0.0 | 818 |
Msa0198870 | MtrunA17_Chr3g0130691 | 32.605 | 641 | 363 | 17 | 236 | 849 | 261 | 859 | 8.37e-90 | 305 |
Msa0198870 | MtrunA17_Chr5g0409111 | 31.019 | 677 | 395 | 23 | 177 | 839 | 133 | 751 | 4.62e-82 | 286 |
Msa0198870 | MtrunA17_Chr7g0256191 | 26.224 | 286 | 173 | 11 | 507 | 760 | 578 | 857 | 1.90e-14 | 77.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0198870 | AT5G11720.1 | 63.158 | 893 | 315 | 7 | 25 | 912 | 18 | 901 | 0.0 | 1160 |
Msa0198870 | AT1G68560.1 | 46.556 | 900 | 434 | 11 | 42 | 912 | 31 | 912 | 0.0 | 832 |
Msa0198870 | AT3G45940.1 | 45.404 | 903 | 434 | 12 | 18 | 912 | 1 | 852 | 0.0 | 803 |
Msa0198870 | AT5G63840.1 | 32.310 | 684 | 384 | 19 | 201 | 849 | 226 | 865 | 9.86e-96 | 322 |
Msa0198870 | AT5G63840.2 | 32.310 | 684 | 384 | 19 | 201 | 849 | 253 | 892 | 1.31e-95 | 322 |
Msa0198870 | AT3G23640.2 | 32.170 | 659 | 358 | 21 | 196 | 831 | 83 | 675 | 4.68e-88 | 302 |
Msa0198870 | AT3G23640.1 | 32.170 | 659 | 358 | 21 | 196 | 831 | 83 | 675 | 4.68e-88 | 302 |
Msa0198870 | AT3G23640.3 | 32.170 | 659 | 358 | 21 | 196 | 831 | 152 | 744 | 5.66e-88 | 303 |
Find 194 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAACATTTCTAGTCTTTA+AGG | 0.082654 | 2_1:+17632247 | Msa0198870:CDS |
AGGTAGTAGTAGAGTGTTTC+TGG | 0.083360 | 2_1:-17631640 | None:intergenic |
TGTTTGTGTTGATGTGTTTA+TGG | 0.135690 | 2_1:-17631590 | None:intergenic |
CCTAATTATGGTAGGTTAAA+TGG | 0.142786 | 2_1:+17636182 | Msa0198870:CDS |
GTGAAGAAATCAAATTATTT+AGG | 0.156403 | 2_1:+17634490 | Msa0198870:CDS |
ACCCTCATAGCCAAGAATTT+TGG | 0.166971 | 2_1:+17634466 | Msa0198870:CDS |
TAAGGCCATGTTGGTTGTTT+TGG | 0.174465 | 2_1:-17634733 | None:intergenic |
TTAAAGACTAGAAATGTTTC+AGG | 0.191590 | 2_1:-17632245 | None:intergenic |
ATATTGAACTTTGGCATCTT+TGG | 0.199134 | 2_1:+17634885 | Msa0198870:CDS |
TTCATCTCCTGAATTGGTTT+TGG | 0.204644 | 2_1:+17632604 | Msa0198870:CDS |
CCATTTAACCTACCATAATT+AGG | 0.210385 | 2_1:-17636182 | None:intergenic |
CCTATGCCTTATTGGTCTTT+TGG | 0.217026 | 2_1:+17632659 | Msa0198870:CDS |
CAAACCAAACTTTCACTCTT+TGG | 0.219801 | 2_1:+17632363 | Msa0198870:CDS |
CCAGCAACTTCTTTACATTA+TGG | 0.232431 | 2_1:+17634663 | Msa0198870:CDS |
TCAAATTTAAAACAGCTTAT+AGG | 0.237471 | 2_1:+17636317 | Msa0198870:CDS |
GGCCTGCCCCTATGCCTTAT+TGG | 0.240561 | 2_1:+17632651 | Msa0198870:CDS |
AATGTTGATGTGAATCTTTA+TGG | 0.246990 | 2_1:+17632407 | Msa0198870:CDS |
AGAGCTTCTCTGTATGGTTT+TGG | 0.249948 | 2_1:+17632308 | Msa0198870:CDS |
CATACTTTCCTAGAGGAAAT+TGG | 0.252470 | 2_1:+17635775 | Msa0198870:CDS |
ATAAACACACAGTTTCTTCT+AGG | 0.255641 | 2_1:+17635699 | Msa0198870:CDS |
TAGTTATGGACAAGTTTATT+TGG | 0.260726 | 2_1:+17635992 | Msa0198870:CDS |
TTTCTCACATCCAAATAAAA+TGG | 0.270492 | 2_1:-17632437 | None:intergenic |
GGCACCGTTAAATCGTTAAT+TGG | 0.277811 | 2_1:-17634642 | None:intergenic |
ATCTCTTGCAAAGGGGTAAA+AGG | 0.281980 | 2_1:-17635481 | None:intergenic |
TTTCTTCACCCCAAAATTCT+TGG | 0.283230 | 2_1:-17634476 | None:intergenic |
TGTTGGCGAAGGTAACATTT+TGG | 0.289442 | 2_1:+17635887 | Msa0198870:CDS |
TGCTGGTTCATCTCCTGAAT+TGG | 0.290484 | 2_1:+17632598 | Msa0198870:CDS |
CATTCCAAAGAGTGAAAGTT+TGG | 0.290677 | 2_1:-17632367 | None:intergenic |
AGAAATGTTTCAGGGTTTAA+AGG | 0.291288 | 2_1:-17632236 | None:intergenic |
CATAGAAAAGGTTACATTCT+TGG | 0.292151 | 2_1:+17636154 | Msa0198870:CDS |
AAACTATTGTTACTTCTTAG+TGG | 0.297527 | 2_1:+17631433 | Msa0198870:five_prime_UTR |
TACATTAGTGTGTAGAAATA+TGG | 0.304092 | 2_1:-17635600 | None:intergenic |
TTATCTTTCGGAAAATTAAC+AGG | 0.306155 | 2_1:-17633663 | None:intergenic |
CAAGAATGTAAACGATGTTC+AGG | 0.308090 | 2_1:+17633545 | Msa0198870:CDS |
ATAGAAAAGGTTACATTCTT+GGG | 0.313160 | 2_1:+17636155 | Msa0198870:CDS |
TCAGGGTTTAAAGGGTCTTC+TGG | 0.316372 | 2_1:-17632227 | None:intergenic |
GTTACTTCTAATGTTACTAA+TGG | 0.318927 | 2_1:+17636104 | Msa0198870:CDS |
ACACATCAACACAAACAAAA+TGG | 0.324182 | 2_1:+17631596 | Msa0198870:exon |
CGGTGATCGTCTTACTTATA+AGG | 0.324376 | 2_1:+17632544 | Msa0198870:CDS |
TGTCATTGCTTCACCTTGTA+AGG | 0.328657 | 2_1:-17635910 | None:intergenic |
GTTAAAGAGTATATCTTTGT+TGG | 0.331859 | 2_1:-17632198 | None:intergenic |
TGAAGAAATCAAATTATTTA+GGG | 0.336493 | 2_1:+17634491 | Msa0198870:CDS |
TACTGATCCAAAACCAATTC+AGG | 0.336794 | 2_1:-17632611 | None:intergenic |
ACTCTTTGGAATGAAGATAT+TGG | 0.343085 | 2_1:+17632377 | Msa0198870:CDS |
AAATTTCTCATCTTATCTTT+CGG | 0.348401 | 2_1:-17633675 | None:intergenic |
GAAGACTAAAATAAGGTAGA+AGG | 0.349390 | 2_1:+17636355 | Msa0198870:exon |
CAGGCAAGAGCTTTACCTTT+GGG | 0.354744 | 2_1:+17635524 | Msa0198870:CDS |
TTCTTGGGGATACCTAATTA+TGG | 0.360897 | 2_1:+17636170 | Msa0198870:CDS |
AGTGGAAATGGAAATAGTTA+TGG | 0.365565 | 2_1:+17635978 | Msa0198870:CDS |
TTGAACTGAAGACTAAAATA+AGG | 0.365980 | 2_1:+17636348 | Msa0198870:CDS |
CCCCAAAATTCTTGGCTATG+AGG | 0.366805 | 2_1:-17634468 | None:intergenic |
ACGACCAATTAACGATTTAA+CGG | 0.369990 | 2_1:+17634638 | Msa0198870:CDS |
CTCCACAACACAACTCCATT+TGG | 0.372642 | 2_1:+17632155 | Msa0198870:CDS |
TAGTGGAAATAACTGGTAAA+AGG | 0.379991 | 2_1:+17634754 | Msa0198870:CDS |
GATCAGTATACTCAGTTCAT+TGG | 0.382985 | 2_1:+17632626 | Msa0198870:CDS |
TACTAATGGAAAATTTGCTT+TGG | 0.383338 | 2_1:+17636118 | Msa0198870:CDS |
ACATATGCAACCTATGTTAG+AGG | 0.383951 | 2_1:+17634354 | Msa0198870:CDS |
GAAATGTTTCAGGGTTTAAA+GGG | 0.385560 | 2_1:-17632235 | None:intergenic |
ATGCCAAAGTTCAATATTGA+TGG | 0.387478 | 2_1:-17634879 | None:intergenic |
GAACACCTCATTCGAACTAT+TGG | 0.389488 | 2_1:+17635947 | Msa0198870:CDS |
TCGATTATCTAGGAGAAGTT+TGG | 0.392099 | 2_1:+17634412 | Msa0198870:CDS |
TATGATTCTCACAATTTGTA+TGG | 0.393637 | 2_1:+17634699 | Msa0198870:CDS |
AACAACCAACATGGCCTTAG+TGG | 0.394666 | 2_1:+17634737 | Msa0198870:CDS |
TCTTACTCTTAATTGATCCT+TGG | 0.395280 | 2_1:-17631979 | None:intergenic |
GTAAAGATAAGGTCTGAGTT+TGG | 0.404350 | 2_1:-17632131 | None:intergenic |
AAGAAAGCACATATTCTTTG+AGG | 0.407259 | 2_1:-17636398 | None:intergenic |
AAAGAAACACAAGTAGGTTA+TGG | 0.412147 | 2_1:+17631726 | Msa0198870:CDS |
AGAAAATCAGGATAGTAAAC+TGG | 0.414597 | 2_1:-17634441 | None:intergenic |
TTCTGCACTCACTGAATTTG+AGG | 0.421849 | 2_1:-17635814 | None:intergenic |
CTATGAGGGTTAAGAAAATC+AGG | 0.425136 | 2_1:-17634453 | None:intergenic |
AATTCAGTGAGTGCAGAATC+AGG | 0.427668 | 2_1:+17635819 | Msa0198870:CDS |
TCAGGCAAGAGCTTTACCTT+TGG | 0.428705 | 2_1:+17635523 | Msa0198870:CDS |
GATGTCTATATAAAGAGAAA+TGG | 0.430026 | 2_1:+17634387 | Msa0198870:CDS |
TCAGAAATATGTGCTTATCT+TGG | 0.433264 | 2_1:+17633722 | Msa0198870:CDS |
TGAGGTGTTCCGAGCTGCTT+TGG | 0.436826 | 2_1:-17635934 | None:intergenic |
ATGGCCTTAGTGGAAATAAC+TGG | 0.438919 | 2_1:+17634747 | Msa0198870:CDS |
AAGAGAAGTGGCCGCGCAAT+TGG | 0.441480 | 2_1:-17635645 | None:intergenic |
TCGTATGTTGTGATATCCTC+GGG | 0.443679 | 2_1:-17635675 | None:intergenic |
GTCTCACCTGTGCTACAATC+TGG | 0.446789 | 2_1:+17635735 | Msa0198870:CDS |
ATCCCATCAATATTGAACTT+TGG | 0.446973 | 2_1:+17634876 | Msa0198870:CDS |
TTATCTAGTATAGTGTCAAA+AGG | 0.447920 | 2_1:+17636494 | Msa0198870:three_prime_UTR |
TGTTGAATCTGCAACAGTTT+GGG | 0.452573 | 2_1:-17631700 | None:intergenic |
AGAAATGGACTCGATTATCT+AGG | 0.454600 | 2_1:+17634402 | Msa0198870:CDS |
CTGATTCAAATAATCAAAGA+TGG | 0.455941 | 2_1:+17632006 | Msa0198870:CDS |
GACTTACCAAAAGACCAATA+AGG | 0.456656 | 2_1:-17632665 | None:intergenic |
ATGTACGAATCAAACACAAA+AGG | 0.457037 | 2_1:+17635618 | Msa0198870:CDS |
GCTGAATGATCTCTTGCAAA+GGG | 0.458189 | 2_1:-17635489 | None:intergenic |
TCAAGCCAAATACCATCAAA+AGG | 0.461330 | 2_1:-17634522 | None:intergenic |
TTCGTATGTTGTGATATCCT+CGG | 0.462316 | 2_1:-17635676 | None:intergenic |
ACTTTGTCGGCGATGGATCC+AGG | 0.467548 | 2_1:+17634962 | Msa0198870:CDS |
ATCTTTGGAATTCCAATGGT+TGG | 0.471395 | 2_1:+17634900 | Msa0198870:CDS |
GATGAAGATGATGAGTCTCT+TGG | 0.472474 | 2_1:-17632050 | None:intergenic |
GGTGAGGCTCTTGATCTAGA+AGG | 0.473207 | 2_1:+17636020 | Msa0198870:CDS |
CCCAAAATTCTTGGCTATGA+GGG | 0.474032 | 2_1:-17634467 | None:intergenic |
CAAAAGACCAATAAGGCATA+GGG | 0.479856 | 2_1:-17632658 | None:intergenic |
ATGTTGAATCTGCAACAGTT+TGG | 0.481616 | 2_1:-17631701 | None:intergenic |
ATCAAATTTCAATACTTCAA+AGG | 0.482685 | 2_1:+17634557 | Msa0198870:CDS |
TTTACCAGTTATTTCCACTA+AGG | 0.483084 | 2_1:-17634751 | None:intergenic |
CACTTCTCAACCTCAGTGCC+AGG | 0.484820 | 2_1:+17631847 | Msa0198870:CDS |
TGTACGAATCAAACACAAAA+GGG | 0.487657 | 2_1:+17635619 | Msa0198870:CDS |
GGACAAGTTTATTTGGATGA+TGG | 0.487865 | 2_1:+17635999 | Msa0198870:CDS |
TAAAGACTAGAAATGTTTCA+GGG | 0.489335 | 2_1:-17632244 | None:intergenic |
TCTGCACTCACTGAATTTGA+GGG | 0.489690 | 2_1:-17635813 | None:intergenic |
CCATAATGTAAAGAAGTTGC+TGG | 0.489736 | 2_1:-17634663 | None:intergenic |
CATATATCTGCTCCAACCAT+TGG | 0.492448 | 2_1:-17634912 | None:intergenic |
TATCTAGGAGAAGTTTGGCC+AGG | 0.494828 | 2_1:+17634417 | Msa0198870:CDS |
CGCGTGATAGTGAAACCAAA+TGG | 0.496436 | 2_1:-17632170 | None:intergenic |
CTGGCAAGTATACAGCTCAT+TGG | 0.501264 | 2_1:+17634811 | Msa0198870:CDS |
GTATACAAGTTGGTTCATCT+AGG | 0.502766 | 2_1:-17631526 | None:intergenic |
CTGAAGAACTTTGTCGGCGA+TGG | 0.503608 | 2_1:+17634955 | Msa0198870:CDS |
GCTTCTTAATAGTAATGGAA+TGG | 0.506681 | 2_1:+17632508 | Msa0198870:CDS |
GTTGATCTACTCAAAATGAA+TGG | 0.508385 | 2_1:-17634777 | None:intergenic |
ACACAACTGAAGAACTTTGT+CGG | 0.508497 | 2_1:+17634949 | Msa0198870:CDS |
TCAGGATAGTAAACTGGTCC+TGG | 0.510223 | 2_1:-17634435 | None:intergenic |
GACCAATAAGGCATAGGGGC+AGG | 0.516640 | 2_1:-17632653 | None:intergenic |
GTGAGAAAGGGTTCATCTGA+TGG | 0.517583 | 2_1:+17632452 | Msa0198870:CDS |
GAGACAAGCCATGTTGACTT+AGG | 0.520720 | 2_1:-17631485 | None:intergenic |
AGGTTGAGAAGTGGAATGTC+GGG | 0.524210 | 2_1:-17631837 | None:intergenic |
CCTTACAAAATTAACAGTAC+TGG | 0.525399 | 2_1:+17634609 | Msa0198870:CDS |
AAGGTAAAGCTCTTGCCTGA+TGG | 0.527100 | 2_1:-17635520 | None:intergenic |
TCTCTTGGAATCACTTCTTG+TGG | 0.529448 | 2_1:-17632035 | None:intergenic |
TGCCAAAGTTCAATATTGAT+GGG | 0.533863 | 2_1:-17634878 | None:intergenic |
TATCTAGTATAGTGTCAAAA+GGG | 0.534291 | 2_1:+17636495 | Msa0198870:three_prime_UTR |
TGGCATCTTTGGAATTCCAA+TGG | 0.536303 | 2_1:+17634896 | Msa0198870:CDS |
TAGGAGAAAACGAAGAGTAA+TGG | 0.536653 | 2_1:-17631507 | None:intergenic |
CCAAAAGACCAATAAGGCAT+AGG | 0.537624 | 2_1:-17632659 | None:intergenic |
GTATACCCCTCGAAGTTATG+TGG | 0.541014 | 2_1:+17633595 | Msa0198870:CDS |
TATGTGCTTATCTTGGATCC+AGG | 0.542404 | 2_1:+17633729 | Msa0198870:CDS |
TAGAAGGAGAGAAAGATCAA+TGG | 0.544165 | 2_1:+17636036 | Msa0198870:CDS |
CAGGAGATAATGCTGCTACA+TGG | 0.545216 | 2_1:+17634835 | Msa0198870:CDS |
AAGTATACAGCTCATTGGAC+AGG | 0.547239 | 2_1:+17634816 | Msa0198870:CDS |
ATCTGTCCACATAACTTCGA+GGG | 0.548502 | 2_1:-17633601 | None:intergenic |
GAGGTTGAGAAGTGGAATGT+CGG | 0.549383 | 2_1:-17631838 | None:intergenic |
TACTTCTTAGTGGAAAATGT+TGG | 0.550682 | 2_1:+17631443 | Msa0198870:five_prime_UTR |
TATCTGTCCACATAACTTCG+AGG | 0.550869 | 2_1:-17633602 | None:intergenic |
AGCTGAATGATCTCTTGCAA+AGG | 0.551173 | 2_1:-17635490 | None:intergenic |
GTAACCAACTATGCAAAAGC+TGG | 0.551719 | 2_1:+17633573 | Msa0198870:CDS |
AGTTTATTTGGATGATGGTG+AGG | 0.554211 | 2_1:+17636004 | Msa0198870:CDS |
TGGGGATACCTAATTATGGT+AGG | 0.555154 | 2_1:+17636174 | Msa0198870:CDS |
GTCTTCTAAGTTTGTTACTG+TGG | 0.557046 | 2_1:+17636289 | Msa0198870:CDS |
GTGGACAGATATTGATTACA+TGG | 0.557543 | 2_1:+17633614 | Msa0198870:CDS |
AGTATACTCAGTTCATTGGT+AGG | 0.561924 | 2_1:+17632630 | Msa0198870:CDS |
AGATCAAACCAATTTCCTCT+AGG | 0.562622 | 2_1:-17635783 | None:intergenic |
CGTCTTACTTATAAGGTGAT+CGG | 0.564907 | 2_1:+17632551 | Msa0198870:CDS |
ATAAAGATTCACATCAACAT+TGG | 0.567891 | 2_1:-17632405 | None:intergenic |
AGCTTGTAAGCCTCTAACAT+AGG | 0.569461 | 2_1:-17634364 | None:intergenic |
AAGAATGTAAACGATGTTCA+GGG | 0.570870 | 2_1:+17633546 | Msa0198870:CDS |
CAAGCCAAATACCATCAAAA+GGG | 0.571894 | 2_1:-17634521 | None:intergenic |
TGATTCAAATAATCAAAGAT+GGG | 0.572293 | 2_1:+17632007 | Msa0198870:CDS |
AACAACCAATAGTTCGAATG+AGG | 0.573769 | 2_1:-17635952 | None:intergenic |
AAGACTAAAATAAGGTAGAA+GGG | 0.574007 | 2_1:+17636356 | Msa0198870:exon |
TATTTCCACTAAGGCCATGT+TGG | 0.577601 | 2_1:-17634742 | None:intergenic |
TGTAGAAATATGGAAGAAGA+CGG | 0.577680 | 2_1:-17635590 | None:intergenic |
ACTGCACCAGATTGTAGCAC+AGG | 0.578361 | 2_1:-17635741 | None:intergenic |
ATAAATGTGCATGTTGGCGA+AGG | 0.585403 | 2_1:+17635876 | Msa0198870:CDS |
AACCAAATGGAGTTGTGTTG+TGG | 0.590183 | 2_1:-17632157 | None:intergenic |
TAGAAAAGGTTACATTCTTG+GGG | 0.594307 | 2_1:+17636156 | Msa0198870:CDS |
TGGAAGAAGACGGTAACGAA+GGG | 0.598774 | 2_1:-17635580 | None:intergenic |
TGTTGTGGAGTGTAAAGATA+AGG | 0.599631 | 2_1:-17632142 | None:intergenic |
ACACAGTTTCTTCTAGGCAA+AGG | 0.599768 | 2_1:+17635705 | Msa0198870:CDS |
AAAACTCATCAAATCCTCCT+CGG | 0.602708 | 2_1:+17631806 | Msa0198870:CDS |
CTGATGGAAGAGTGAAAAGT+GGG | 0.603494 | 2_1:+17632468 | Msa0198870:CDS |
ACCTTAACTAAGGTGAAACA+AGG | 0.603803 | 2_1:-17636446 | None:intergenic |
TCTGATGGAAGAGTGAAAAG+TGG | 0.615826 | 2_1:+17632467 | Msa0198870:CDS |
ATGGAAGAAGACGGTAACGA+AGG | 0.620146 | 2_1:-17635581 | None:intergenic |
AAGAAGCAAAACACCATGTG+TGG | 0.623596 | 2_1:-17632492 | None:intergenic |
CAATGACAACCAAAGCAGCT+CGG | 0.624482 | 2_1:+17635925 | Msa0198870:CDS |
ATGGTTGGAGCAGATATATG+TGG | 0.625492 | 2_1:+17634915 | Msa0198870:CDS |
GTGAAAAGTGGGACCACACA+TGG | 0.628136 | 2_1:+17632479 | Msa0198870:CDS |
TGCACATTTATGTGATCAGA+TGG | 0.629493 | 2_1:-17635864 | None:intergenic |
AGTGAGTTAAATGTGGTGAG+TGG | 0.630902 | 2_1:+17636221 | Msa0198870:CDS |
GGAATGGATGTTGTTTATAG+CGG | 0.631537 | 2_1:+17632524 | Msa0198870:CDS |
GTCTGAGAGTGAGTTAAATG+TGG | 0.631970 | 2_1:+17636214 | Msa0198870:CDS |
TAGTTAGTTACCTGGCACTG+AGG | 0.632289 | 2_1:-17631857 | None:intergenic |
ACATCAAAAGAAACACAAGT+AGG | 0.634987 | 2_1:+17631720 | Msa0198870:CDS |
CTGGCACTGAGGTTGAGAAG+TGG | 0.635565 | 2_1:-17631846 | None:intergenic |
TTGAAACAGAAAGCTAGTAG+AGG | 0.643674 | 2_1:-17631660 | None:intergenic |
GTCGGGTCCGAAAACCGAGG+AGG | 0.650281 | 2_1:-17631820 | None:intergenic |
TCTTATCTCCTAAGTCAACA+TGG | 0.650416 | 2_1:+17631477 | Msa0198870:five_prime_UTR |
TCGGGGAATGAAAAGAGAAG+TGG | 0.651687 | 2_1:-17635657 | None:intergenic |
GGGCTGTCAAGACTAGAATG+TGG | 0.661985 | 2_1:-17634585 | None:intergenic |
CTTACTTATAAGGTGATCGG+TGG | 0.663566 | 2_1:+17632554 | Msa0198870:CDS |
ATGCTGCAACTGAATCCCAA+AGG | 0.664437 | 2_1:-17635539 | None:intergenic |
GTCGATGCATACTTTCCTAG+AGG | 0.665420 | 2_1:+17635768 | Msa0198870:CDS |
GATCACATAAATGTGCATGT+TGG | 0.667069 | 2_1:+17635870 | Msa0198870:CDS |
TCTGTCCACATAACTTCGAG+GGG | 0.671729 | 2_1:-17633600 | None:intergenic |
CTGAATGATCTCTTGCAAAG+GGG | 0.681793 | 2_1:-17635488 | None:intergenic |
CAAAAGGGACACCAATTGCG+CGG | 0.682204 | 2_1:+17635634 | Msa0198870:CDS |
CCTTAACTAAGGTGAAACAA+GGG | 0.685925 | 2_1:-17636445 | None:intergenic |
AGAATCCAAAACAACCAACA+TGG | 0.687034 | 2_1:+17634728 | Msa0198870:CDS |
AAAAGACCAATAAGGCATAG+GGG | 0.693626 | 2_1:-17632657 | None:intergenic |
CGTATGTTGTGATATCCTCG+GGG | 0.701917 | 2_1:-17635674 | None:intergenic |
AATGTCGGGTCCGAAAACCG+AGG | 0.752236 | 2_1:-17631823 | None:intergenic |
TGAGTGGAATGAATTCAATG+AGG | 0.766723 | 2_1:+17636237 | Msa0198870:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAACAATAAATTATGAT+TGG | - | chr2_1:17631895-17631914 | None:intergenic | 10.0% |
!! | TAAATACTAGAAAAAAAATT+CGG | - | chr2_1:17633112-17633131 | None:intergenic | 10.0% |
!! | CAAAAAATTAAACCATATAA+AGG | + | chr2_1:17633329-17633348 | Msa0198870:intron | 15.0% |
!! | AAAAAAAAAAAAAAGAATGG+AGG | - | chr2_1:17634109-17634128 | None:intergenic | 15.0% |
!! | TGAAGAAATCAAATTATTTA+GGG | + | chr2_1:17634491-17634510 | Msa0198870:CDS | 15.0% |
!! | TTATTCTAGTGAAAAAATTA+TGG | - | chr2_1:17635021-17635040 | None:intergenic | 15.0% |
!! | GAAAATAAATAGTATTAGAT+AGG | - | chr2_1:17635444-17635463 | None:intergenic | 15.0% |
!!! | TTTATGTTTTGTATACAAGT+TGG | - | chr2_1:17631539-17631558 | None:intergenic | 20.0% |
!! | TGATTCAAATAATCAAAGAT+GGG | + | chr2_1:17632007-17632026 | Msa0198870:CDS | 20.0% |
!!! | TTTGATTTGTATTTTTTTGC+TGG | + | chr2_1:17632581-17632600 | Msa0198870:CDS | 20.0% |
!! | ATTTATATCTGACAATAACA+TGG | + | chr2_1:17633127-17633146 | Msa0198870:intron | 20.0% |
!! | AAATTTCTCATCTTATCTTT+CGG | - | chr2_1:17633678-17633697 | None:intergenic | 20.0% |
!!! | TATTTTGTGATGTTAGAATT+TGG | - | chr2_1:17633757-17633776 | None:intergenic | 20.0% |
!! | AGTCAATTCTTTATGAAAAA+GGG | - | chr2_1:17634149-17634168 | None:intergenic | 20.0% |
!! | AAGTCAATTCTTTATGAAAA+AGG | - | chr2_1:17634150-17634169 | None:intergenic | 20.0% |
!! | GTGAAGAAATCAAATTATTT+AGG | + | chr2_1:17634490-17634509 | Msa0198870:CDS | 20.0% |
!! | ATCAAATTTCAATACTTCAA+AGG | + | chr2_1:17634557-17634576 | Msa0198870:CDS | 20.0% |
!! | TTTAAGAAAGGATATAACTT+AGG | - | chr2_1:17635375-17635394 | None:intergenic | 20.0% |
!!! | TTTTGATCACAAAATTTGAT+AGG | + | chr2_1:17636267-17636286 | Msa0198870:CDS | 20.0% |
!!! | TCAAATTTAAAACAGCTTAT+AGG | + | chr2_1:17636317-17636336 | Msa0198870:CDS | 20.0% |
!! | AAACTATTGTTACTTCTTAG+TGG | + | chr2_1:17631433-17631452 | Msa0198870:five_prime_UTR | 25.0% |
! | AACAATCTAGTAAAAGAGAA+AGG | - | chr2_1:17631923-17631942 | None:intergenic | 25.0% |
! | CTGATTCAAATAATCAAAGA+TGG | + | chr2_1:17632006-17632025 | Msa0198870:CDS | 25.0% |
!!! | ATTTTGAGTTTTGCGAATTT+TGG | - | chr2_1:17632097-17632116 | None:intergenic | 25.0% |
!! | GTTAAAGAGTATATCTTTGT+TGG | - | chr2_1:17632201-17632220 | None:intergenic | 25.0% |
! | TAAAGACTAGAAATGTTTCA+GGG | - | chr2_1:17632247-17632266 | None:intergenic | 25.0% |
! | TTAAAGACTAGAAATGTTTC+AGG | - | chr2_1:17632248-17632267 | None:intergenic | 25.0% |
!!! | TGAAACATTTCTAGTCTTTA+AGG | + | chr2_1:17632247-17632266 | Msa0198870:CDS | 25.0% |
! | ATAAAGATTCACATCAACAT+TGG | - | chr2_1:17632408-17632427 | None:intergenic | 25.0% |
! | AATGTTGATGTGAATCTTTA+TGG | + | chr2_1:17632407-17632426 | Msa0198870:CDS | 25.0% |
! | TTTCTCACATCCAAATAAAA+TGG | - | chr2_1:17632440-17632459 | None:intergenic | 25.0% |
!!! | ATTTTATTTGGATGTGAGAA+AGG | + | chr2_1:17632439-17632458 | Msa0198870:CDS | 25.0% |
!!! | TTTTATTTGGATGTGAGAAA+GGG | + | chr2_1:17632440-17632459 | Msa0198870:CDS | 25.0% |
!! | GTTTTGCTTCTTAATAGTAA+TGG | + | chr2_1:17632503-17632522 | Msa0198870:CDS | 25.0% |
! | TTAAAACAACTAGAACTACA+AGG | - | chr2_1:17632726-17632745 | None:intergenic | 25.0% |
! | AGTGTTTATAGCAAGTTATA+AGG | + | chr2_1:17632759-17632778 | Msa0198870:intron | 25.0% |
!!! | ATAAGGTGCACAATTTTAAT+AGG | + | chr2_1:17632776-17632795 | Msa0198870:intron | 25.0% |
! | CAAGATAAAATAGATATGTG+TGG | + | chr2_1:17632938-17632957 | Msa0198870:intron | 25.0% |
!!! | AATAACATGGTTTTGAATTG+CGG | + | chr2_1:17633140-17633159 | Msa0198870:intron | 25.0% |
!!! | GTTTTAAATCCTTTAAGTTG+TGG | + | chr2_1:17633171-17633190 | Msa0198870:intron | 25.0% |
! | ACTTGAAAGAATGTGTTTAT+AGG | + | chr2_1:17633240-17633259 | Msa0198870:intron | 25.0% |
! | TCAATGAATAGACCTTTATA+TGG | - | chr2_1:17633344-17633363 | None:intergenic | 25.0% |
! | TTATCTTTCGGAAAATTAAC+AGG | - | chr2_1:17633666-17633685 | None:intergenic | 25.0% |
!! | GTAGTAGTAATAATGGAAAA+AGG | + | chr2_1:17633930-17633949 | Msa0198870:intron | 25.0% |
!! | AATGGAAAAAGGAGAATTTT+AGG | + | chr2_1:17633941-17633960 | Msa0198870:intron | 25.0% |
!! | ATGGAAAAAGGAGAATTTTA+GGG | + | chr2_1:17633942-17633961 | Msa0198870:intron | 25.0% |
!!! | TAGTAAAAGTATTCCATGTT+TGG | - | chr2_1:17634006-17634025 | None:intergenic | 25.0% |
! | GTCAATTCTTTATGAAAAAG+GGG | - | chr2_1:17634148-17634167 | None:intergenic | 25.0% |
! | AAAATTCCACTATGTGAAAT+AGG | - | chr2_1:17634221-17634240 | None:intergenic | 25.0% |
!!! | TATTTCACATAGTGGAATTT+TGG | + | chr2_1:17634220-17634239 | Msa0198870:intron | 25.0% |
! | GATGTCTATATAAAGAGAAA+TGG | + | chr2_1:17634387-17634406 | Msa0198870:CDS | 25.0% |
!! | TACTGTTAATTTTGTAAGGA+GGG | - | chr2_1:17634608-17634627 | None:intergenic | 25.0% |
! | TATGATTCTCACAATTTGTA+TGG | + | chr2_1:17634699-17634718 | Msa0198870:CDS | 25.0% |
! | ATTCTTATATTTGAGAGTTG+CGG | + | chr2_1:17635120-17635139 | Msa0198870:intron | 25.0% |
! | CTATCACAAACAAATATGAA+AGG | - | chr2_1:17635301-17635320 | None:intergenic | 25.0% |
!!! | TTTCATCATGCTTTTAAGAA+AGG | - | chr2_1:17635387-17635406 | None:intergenic | 25.0% |
!! | TTATTTTCCTGAATGTAGTT+AGG | + | chr2_1:17635456-17635475 | Msa0198870:intron | 25.0% |
!! | TATTTTCCTGAATGTAGTTA+GGG | + | chr2_1:17635457-17635476 | Msa0198870:intron | 25.0% |
! | TACATTAGTGTGTAGAAATA+TGG | - | chr2_1:17635603-17635622 | None:intergenic | 25.0% |
! | TAGTTATGGACAAGTTTATT+TGG | + | chr2_1:17635992-17636011 | Msa0198870:CDS | 25.0% |
! | GTTACTTCTAATGTTACTAA+TGG | + | chr2_1:17636104-17636123 | Msa0198870:CDS | 25.0% |
!! | TACTAATGGAAAATTTGCTT+TGG | + | chr2_1:17636118-17636137 | Msa0198870:CDS | 25.0% |
! | ATAGAAAAGGTTACATTCTT+GGG | + | chr2_1:17636155-17636174 | Msa0198870:CDS | 25.0% |
! | TTGAACTGAAGACTAAAATA+AGG | + | chr2_1:17636348-17636367 | Msa0198870:CDS | 25.0% |
! | AAGACTAAAATAAGGTAGAA+GGG | + | chr2_1:17636356-17636375 | Msa0198870:exon | 25.0% |
! | TTATCTAGTATAGTGTCAAA+AGG | + | chr2_1:17636494-17636513 | Msa0198870:three_prime_UTR | 25.0% |
! | TATCTAGTATAGTGTCAAAA+GGG | + | chr2_1:17636495-17636514 | Msa0198870:three_prime_UTR | 25.0% |
TACTTCTTAGTGGAAAATGT+TGG | + | chr2_1:17631443-17631462 | Msa0198870:five_prime_UTR | 30.0% | |
TGTTGATGTGTTTATGGTTT+GGG | - | chr2_1:17631587-17631606 | None:intergenic | 30.0% | |
! | TGTTTGTGTTGATGTGTTTA+TGG | - | chr2_1:17631593-17631612 | None:intergenic | 30.0% |
ACACATCAACACAAACAAAA+TGG | + | chr2_1:17631596-17631615 | Msa0198870:exon | 30.0% | |
ACATCAAAAGAAACACAAGT+AGG | + | chr2_1:17631720-17631739 | Msa0198870:CDS | 30.0% | |
AAAGAAACACAAGTAGGTTA+TGG | + | chr2_1:17631726-17631745 | Msa0198870:CDS | 30.0% | |
TAGTTAGTTAGTTAGTTACC+TGG | - | chr2_1:17631868-17631887 | None:intergenic | 30.0% | |
TCTTACTCTTAATTGATCCT+TGG | - | chr2_1:17631982-17632001 | None:intergenic | 30.0% | |
GAAATGTTTCAGGGTTTAAA+GGG | - | chr2_1:17632238-17632257 | None:intergenic | 30.0% | |
AGAAATGTTTCAGGGTTTAA+AGG | - | chr2_1:17632239-17632258 | None:intergenic | 30.0% | |
!! | ACTCTTTGGAATGAAGATAT+TGG | + | chr2_1:17632377-17632396 | Msa0198870:CDS | 30.0% |
! | GCTTCTTAATAGTAATGGAA+TGG | + | chr2_1:17632508-17632527 | Msa0198870:CDS | 30.0% |
AAAAATTCAACAAACCATGC+TGG | - | chr2_1:17632690-17632709 | None:intergenic | 30.0% | |
CTAGAACTACAAGGATAAAA+AGG | - | chr2_1:17632717-17632736 | None:intergenic | 30.0% | |
!! | TGACCTTATTGGTTTCAATT+TGG | + | chr2_1:17632909-17632928 | Msa0198870:intron | 30.0% |
GTTCCAAATTGAAACCAATA+AGG | - | chr2_1:17632915-17632934 | None:intergenic | 30.0% | |
!! | GGCTTTATATTTTGAATCTG+TGG | - | chr2_1:17633209-17633228 | None:intergenic | 30.0% |
!! | TCTTTCAAGTTTCATAGCAT+TGG | - | chr2_1:17633230-17633249 | None:intergenic | 30.0% |
AAGCCATTCCTAACTTAATA+GGG | - | chr2_1:17633295-17633314 | None:intergenic | 30.0% | |
TAAGCCATTCCTAACTTAAT+AGG | - | chr2_1:17633296-17633315 | None:intergenic | 30.0% | |
AAATTTCTATGCATTAGTCC+AGG | + | chr2_1:17633377-17633396 | Msa0198870:intron | 30.0% | |
AATTTCTATGCATTAGTCCA+GGG | + | chr2_1:17633378-17633397 | Msa0198870:intron | 30.0% | |
!! | TGGTGTTAAATTTTAATGCC+TGG | - | chr2_1:17633406-17633425 | None:intergenic | 30.0% |
ACAGTGATGTGAATTAGTAT+AGG | - | chr2_1:17633487-17633506 | None:intergenic | 30.0% | |
AAGAATGTAAACGATGTTCA+GGG | + | chr2_1:17633546-17633565 | Msa0198870:CDS | 30.0% | |
!! | TTTCTGACCATTTTTGTGAA+GGG | - | chr2_1:17633709-17633728 | None:intergenic | 30.0% |
!! | ATTTCTGACCATTTTTGTGA+AGG | - | chr2_1:17633710-17633729 | None:intergenic | 30.0% |
TCAGAAATATGTGCTTATCT+TGG | + | chr2_1:17633722-17633741 | Msa0198870:CDS | 30.0% | |
AAACTAAACATACTCTACTC+CGG | + | chr2_1:17633783-17633802 | Msa0198870:intron | 30.0% | |
AGCATTGTAACATAACATAG+TGG | + | chr2_1:17633829-17633848 | Msa0198870:intron | 30.0% | |
TTATTACTACTACATCAGCT+AGG | - | chr2_1:17633923-17633942 | None:intergenic | 30.0% | |
AGCTGATGTAGTAGTAATAA+TGG | + | chr2_1:17633923-17633942 | Msa0198870:intron | 30.0% | |
AAAACTGAAGAATCTGCATA+TGG | + | chr2_1:17633979-17633998 | Msa0198870:intron | 30.0% | |
AAACTGAAGAATCTGCATAT+GGG | + | chr2_1:17633980-17633999 | Msa0198870:intron | 30.0% | |
ACTATAGAAAACCGATGATT+AGG | + | chr2_1:17634022-17634041 | Msa0198870:intron | 30.0% | |
AGAAAATCAGGATAGTAAAC+TGG | - | chr2_1:17634444-17634463 | None:intergenic | 30.0% | |
! | GTACTGTTAATTTTGTAAGG+AGG | - | chr2_1:17634609-17634628 | None:intergenic | 30.0% |
! | CCAGTACTGTTAATTTTGTA+AGG | - | chr2_1:17634612-17634631 | None:intergenic | 30.0% |
CCTTACAAAATTAACAGTAC+TGG | + | chr2_1:17634609-17634628 | Msa0198870:CDS | 30.0% | |
ACGACCAATTAACGATTTAA+CGG | + | chr2_1:17634638-17634657 | Msa0198870:CDS | 30.0% | |
! | TTTACCAGTTATTTCCACTA+AGG | - | chr2_1:17634754-17634773 | None:intergenic | 30.0% |
TAGTGGAAATAACTGGTAAA+AGG | + | chr2_1:17634754-17634773 | Msa0198870:CDS | 30.0% | |
GTTGATCTACTCAAAATGAA+TGG | - | chr2_1:17634780-17634799 | None:intergenic | 30.0% | |
ATCCCATCAATATTGAACTT+TGG | + | chr2_1:17634876-17634895 | Msa0198870:CDS | 30.0% | |
TGCCAAAGTTCAATATTGAT+GGG | - | chr2_1:17634881-17634900 | None:intergenic | 30.0% | |
ATGCCAAAGTTCAATATTGA+TGG | - | chr2_1:17634882-17634901 | None:intergenic | 30.0% | |
ATATTGAACTTTGGCATCTT+TGG | + | chr2_1:17634885-17634904 | Msa0198870:CDS | 30.0% | |
ACAAACACTGATCTTCAAAA+TGG | + | chr2_1:17634987-17635006 | Msa0198870:intron | 30.0% | |
CAAACACTGATCTTCAAAAT+GGG | + | chr2_1:17634988-17635007 | Msa0198870:intron | 30.0% | |
! | TTTTCGTTTTGTGTAAAGCT+AGG | + | chr2_1:17635074-17635093 | Msa0198870:intron | 30.0% |
ACTCTCAAATATAAGAATGG+AGG | - | chr2_1:17635118-17635137 | None:intergenic | 30.0% | |
GCAACTCTCAAATATAAGAA+TGG | - | chr2_1:17635121-17635140 | None:intergenic | 30.0% | |
!! | CTTTAGAGTCTTTGTGATTA+CGG | - | chr2_1:17635177-17635196 | None:intergenic | 30.0% |
!! | ACTCTAAAGTCTTAATGTTG+CGG | + | chr2_1:17635188-17635207 | Msa0198870:intron | 30.0% |
AGTTAAGCTATCTTTAAGCT+CGG | + | chr2_1:17635319-17635338 | Msa0198870:intron | 30.0% | |
! | ATTTTCCTGAATGTAGTTAG+GGG | + | chr2_1:17635458-17635477 | Msa0198870:intron | 30.0% |
ATTCAGCTAAAAATTCCATC+AGG | + | chr2_1:17635505-17635524 | Msa0198870:CDS | 30.0% | |
TGTAGAAATATGGAAGAAGA+CGG | - | chr2_1:17635593-17635612 | None:intergenic | 30.0% | |
ATGTACGAATCAAACACAAA+AGG | + | chr2_1:17635618-17635637 | Msa0198870:CDS | 30.0% | |
TGTACGAATCAAACACAAAA+GGG | + | chr2_1:17635619-17635638 | Msa0198870:CDS | 30.0% | |
ATAAACACACAGTTTCTTCT+AGG | + | chr2_1:17635699-17635718 | Msa0198870:CDS | 30.0% | |
!!! | GAACTATTGGTTGTTTTAAG+TGG | + | chr2_1:17635960-17635979 | Msa0198870:CDS | 30.0% |
!!! | TTGGTTGTTTTAAGTGGAAA+TGG | + | chr2_1:17635966-17635985 | Msa0198870:CDS | 30.0% |
AGTGGAAATGGAAATAGTTA+TGG | + | chr2_1:17635978-17635997 | Msa0198870:CDS | 30.0% | |
! | AATTTGCTTTGGACCAAAAA+TGG | + | chr2_1:17636129-17636148 | Msa0198870:CDS | 30.0% |
! | CCTTTTCTATGATCCATTTT+TGG | - | chr2_1:17636145-17636164 | None:intergenic | 30.0% |
CCAAAAATGGATCATAGAAA+AGG | + | chr2_1:17636142-17636161 | Msa0198870:CDS | 30.0% | |
CATAGAAAAGGTTACATTCT+TGG | + | chr2_1:17636154-17636173 | Msa0198870:CDS | 30.0% | |
TAGAAAAGGTTACATTCTTG+GGG | + | chr2_1:17636156-17636175 | Msa0198870:CDS | 30.0% | |
CCATTTAACCTACCATAATT+AGG | - | chr2_1:17636185-17636204 | None:intergenic | 30.0% | |
CCTAATTATGGTAGGTTAAA+TGG | + | chr2_1:17636182-17636201 | Msa0198870:CDS | 30.0% | |
GAAGACTAAAATAAGGTAGA+AGG | + | chr2_1:17636355-17636374 | Msa0198870:exon | 30.0% | |
! | AAGAAAGCACATATTCTTTG+AGG | - | chr2_1:17636401-17636420 | None:intergenic | 30.0% |
CTTAGTTAAGGTTACTACAA+GGG | + | chr2_1:17636457-17636476 | Msa0198870:intron | 30.0% | |
TCTTATCTCCTAAGTCAACA+TGG | + | chr2_1:17631477-17631496 | Msa0198870:five_prime_UTR | 35.0% | |
TAGGAGAAAACGAAGAGTAA+TGG | - | chr2_1:17631510-17631529 | None:intergenic | 35.0% | |
!! | GTATACAAGTTGGTTCATCT+AGG | - | chr2_1:17631529-17631548 | None:intergenic | 35.0% |
! | TTGATGTGTTTATGGTTTGG+GGG | - | chr2_1:17631585-17631604 | None:intergenic | 35.0% |
GTTGATGTGTTTATGGTTTG+GGG | - | chr2_1:17631586-17631605 | None:intergenic | 35.0% | |
! | GTGTTGATGTGTTTATGGTT+TGG | - | chr2_1:17631588-17631607 | None:intergenic | 35.0% |
!!! | GTGTTTCTGGTTTTTGTTCT+TGG | - | chr2_1:17631630-17631649 | None:intergenic | 35.0% |
TTGAAACAGAAAGCTAGTAG+AGG | - | chr2_1:17631663-17631682 | None:intergenic | 35.0% | |
TGTTGAATCTGCAACAGTTT+GGG | - | chr2_1:17631703-17631722 | None:intergenic | 35.0% | |
ATGTTGAATCTGCAACAGTT+TGG | - | chr2_1:17631704-17631723 | None:intergenic | 35.0% | |
AGTGTAAAAAGTGATCCAAC+AGG | + | chr2_1:17631762-17631781 | Msa0198870:CDS | 35.0% | |
! | AGGAGGATTTGATGAGTTTT+AGG | - | chr2_1:17631806-17631825 | None:intergenic | 35.0% |
AAAACTCATCAAATCCTCCT+CGG | + | chr2_1:17631806-17631825 | Msa0198870:CDS | 35.0% | |
! | TTGAGTTTTGCGAATTTTGG+TGG | - | chr2_1:17632094-17632113 | None:intergenic | 35.0% |
GTAAAGATAAGGTCTGAGTT+TGG | - | chr2_1:17632134-17632153 | None:intergenic | 35.0% | |
TGTTGTGGAGTGTAAAGATA+AGG | - | chr2_1:17632145-17632164 | None:intergenic | 35.0% | |
! | TACAGAGAAGCTCTTTTTGA+AGG | - | chr2_1:17632302-17632321 | None:intergenic | 35.0% |
TCAAAAAGAGCTTCTCTGTA+TGG | + | chr2_1:17632302-17632321 | Msa0198870:CDS | 35.0% | |
CAAACCAAACTTTCACTCTT+TGG | + | chr2_1:17632363-17632382 | Msa0198870:CDS | 35.0% | |
CATTCCAAAGAGTGAAAGTT+TGG | - | chr2_1:17632370-17632389 | None:intergenic | 35.0% | |
! | TGGCTCTCATCCATTTTATT+TGG | + | chr2_1:17632427-17632446 | Msa0198870:CDS | 35.0% |
! | GGAATGGATGTTGTTTATAG+CGG | + | chr2_1:17632524-17632543 | Msa0198870:CDS | 35.0% |
CGTCTTACTTATAAGGTGAT+CGG | + | chr2_1:17632551-17632570 | Msa0198870:CDS | 35.0% | |
!! | TTCATCTCCTGAATTGGTTT+TGG | + | chr2_1:17632604-17632623 | Msa0198870:CDS | 35.0% |
TACTGATCCAAAACCAATTC+AGG | - | chr2_1:17632614-17632633 | None:intergenic | 35.0% | |
GATCAGTATACTCAGTTCAT+TGG | + | chr2_1:17632626-17632645 | Msa0198870:CDS | 35.0% | |
AGTATACTCAGTTCATTGGT+AGG | + | chr2_1:17632630-17632649 | Msa0198870:CDS | 35.0% | |
AAAAGACCAATAAGGCATAG+GGG | - | chr2_1:17632660-17632679 | None:intergenic | 35.0% | |
CAAAAGACCAATAAGGCATA+GGG | - | chr2_1:17632661-17632680 | None:intergenic | 35.0% | |
GACTTACCAAAAGACCAATA+AGG | - | chr2_1:17632668-17632687 | None:intergenic | 35.0% | |
!! | AGGTGCACAATTTTAATAGG+CGG | + | chr2_1:17632779-17632798 | Msa0198870:intron | 35.0% |
ACTTAAGCGATGACTGATAT+TGG | + | chr2_1:17632836-17632855 | Msa0198870:intron | 35.0% | |
CTATCTCAGATGTTACAACA+AGG | - | chr2_1:17632889-17632908 | None:intergenic | 35.0% | |
! | ATCTGAGATAGTGACCTTAT+TGG | + | chr2_1:17632898-17632917 | Msa0198870:intron | 35.0% |
! | GGTGTTTCGAACAAATTTTC+AGG | + | chr2_1:17633049-17633068 | Msa0198870:intron | 35.0% |
!!! | TCGAACAAATTTTCAGGTTC+TGG | + | chr2_1:17633055-17633074 | Msa0198870:intron | 35.0% |
! | TGAATCTGTGGTAACGATTA+CGG | - | chr2_1:17633197-17633216 | None:intergenic | 35.0% |
AGCCATTCCTAACTTAATAG+GGG | - | chr2_1:17633294-17633313 | None:intergenic | 35.0% | |
GAAAGACAATTGCAATAGAC+TGG | - | chr2_1:17633426-17633445 | None:intergenic | 35.0% | |
CATCACTGTTAACTCTTTGA+AGG | + | chr2_1:17633498-17633517 | Msa0198870:intron | 35.0% | |
! | AAGGTTTTCATCAATGTCGA+TGG | + | chr2_1:17633517-17633536 | Msa0198870:intron | 35.0% |
! | AGGTTTTCATCAATGTCGAT+GGG | + | chr2_1:17633518-17633537 | Msa0198870:intron | 35.0% |
CAAGAATGTAAACGATGTTC+AGG | + | chr2_1:17633545-17633564 | Msa0198870:CDS | 35.0% | |
! | TATACCAGCTTTTGCATAGT+TGG | - | chr2_1:17633580-17633599 | None:intergenic | 35.0% |
! | GTGGACAGATATTGATTACA+TGG | + | chr2_1:17633614-17633633 | Msa0198870:CDS | 35.0% |
GTTGATACCCTTCACAAAAA+TGG | + | chr2_1:17633699-17633718 | Msa0198870:CDS | 35.0% | |
TGATGTTAGAATTTGGTACC+TGG | - | chr2_1:17633750-17633769 | None:intergenic | 35.0% | |
! | TGGATTTTGTGATTCCTCTA+TGG | + | chr2_1:17633849-17633868 | Msa0198870:intron | 35.0% |
TAGGAAAAACTGGAATAGTG+GGG | - | chr2_1:17633904-17633923 | None:intergenic | 35.0% | |
CTAGGAAAAACTGGAATAGT+GGG | - | chr2_1:17633905-17633924 | None:intergenic | 35.0% | |
AGTAATGCTCACCTAATCAT+CGG | - | chr2_1:17634036-17634055 | None:intergenic | 35.0% | |
CTATCTCCTATTTCACATAG+TGG | + | chr2_1:17634212-17634231 | Msa0198870:intron | 35.0% | |
!!! | GTCATTGCTTTTTTGTACAC+AGG | + | chr2_1:17634315-17634334 | Msa0198870:intron | 35.0% |
ACATATGCAACCTATGTTAG+AGG | + | chr2_1:17634354-17634373 | Msa0198870:CDS | 35.0% | |
! | AGAAATGGACTCGATTATCT+AGG | + | chr2_1:17634402-17634421 | Msa0198870:CDS | 35.0% |
TCGATTATCTAGGAGAAGTT+TGG | + | chr2_1:17634412-17634431 | Msa0198870:CDS | 35.0% | |
CTATGAGGGTTAAGAAAATC+AGG | - | chr2_1:17634456-17634475 | None:intergenic | 35.0% | |
TTTCTTCACCCCAAAATTCT+TGG | - | chr2_1:17634479-17634498 | None:intergenic | 35.0% | |
!! | TTCTCCCTTTTGATGGTATT+TGG | + | chr2_1:17634517-17634536 | Msa0198870:CDS | 35.0% |
CAAGCCAAATACCATCAAAA+GGG | - | chr2_1:17634524-17634543 | None:intergenic | 35.0% | |
TCAAGCCAAATACCATCAAA+AGG | - | chr2_1:17634525-17634544 | None:intergenic | 35.0% | |
CCATAATGTAAAGAAGTTGC+TGG | - | chr2_1:17634666-17634685 | None:intergenic | 35.0% | |
CCAGCAACTTCTTTACATTA+TGG | + | chr2_1:17634663-17634682 | Msa0198870:CDS | 35.0% | |
AGAATCCAAAACAACCAACA+TGG | + | chr2_1:17634728-17634747 | Msa0198870:CDS | 35.0% | |
! | AGATCAACTTTTGTTAGCTC+TGG | + | chr2_1:17634792-17634811 | Msa0198870:CDS | 35.0% |
!! | ATCTTTGGAATTCCAATGGT+TGG | + | chr2_1:17634900-17634919 | Msa0198870:CDS | 35.0% |
ACACAACTGAAGAACTTTGT+CGG | + | chr2_1:17634949-17634968 | Msa0198870:CDS | 35.0% | |
! | AGCCTTATAAATAAGTCCCA+CGG | - | chr2_1:17635225-17635244 | None:intergenic | 35.0% |
GGTGTGAAAAATTTGTCTCT+TGG | - | chr2_1:17635280-17635299 | None:intergenic | 35.0% | |
TTCGTATGTTGTGATATCCT+CGG | - | chr2_1:17635679-17635698 | None:intergenic | 35.0% | |
CATACTTTCCTAGAGGAAAT+TGG | + | chr2_1:17635775-17635794 | Msa0198870:CDS | 35.0% | |
AGATCAAACCAATTTCCTCT+AGG | - | chr2_1:17635786-17635805 | None:intergenic | 35.0% | |
TGCACATTTATGTGATCAGA+TGG | - | chr2_1:17635867-17635886 | None:intergenic | 35.0% | |
GATCACATAAATGTGCATGT+TGG | + | chr2_1:17635870-17635889 | Msa0198870:CDS | 35.0% | |
AACAACCAATAGTTCGAATG+AGG | - | chr2_1:17635955-17635974 | None:intergenic | 35.0% | |
GGACAAGTTTATTTGGATGA+TGG | + | chr2_1:17635999-17636018 | Msa0198870:CDS | 35.0% | |
! | AGTTTATTTGGATGATGGTG+AGG | + | chr2_1:17636004-17636023 | Msa0198870:CDS | 35.0% |
TAGAAGGAGAGAAAGATCAA+TGG | + | chr2_1:17636036-17636055 | Msa0198870:CDS | 35.0% | |
! | TGGACACTTGTGAGATTTTA+TGG | + | chr2_1:17636056-17636075 | Msa0198870:CDS | 35.0% |
TTCTTGGGGATACCTAATTA+TGG | + | chr2_1:17636170-17636189 | Msa0198870:CDS | 35.0% | |
TGAGTGGAATGAATTCAATG+AGG | + | chr2_1:17636237-17636256 | Msa0198870:CDS | 35.0% | |
!! | GTCTTCTAAGTTTGTTACTG+TGG | + | chr2_1:17636289-17636308 | Msa0198870:CDS | 35.0% |
CCTTAACTAAGGTGAAACAA+GGG | - | chr2_1:17636448-17636467 | None:intergenic | 35.0% | |
ACCTTAACTAAGGTGAAACA+AGG | - | chr2_1:17636449-17636468 | None:intergenic | 35.0% | |
CCTTGTAGTAACCTTAACTA+AGG | - | chr2_1:17636459-17636478 | None:intergenic | 35.0% | |
CCTTAGTTAAGGTTACTACA+AGG | + | chr2_1:17636456-17636475 | Msa0198870:intron | 35.0% | |
! | AGGTAGTAGTAGAGTGTTTC+TGG | - | chr2_1:17631643-17631662 | None:intergenic | 40.0% |
! | GCAGACAAAGATTTTCCTGT+TGG | - | chr2_1:17631780-17631799 | None:intergenic | 40.0% |
! | ATCAAATCCTCCTCGGTTTT+CGG | + | chr2_1:17631813-17631832 | Msa0198870:CDS | 40.0% |
!!! | ACATTGCAGTTTTGAGACCA+AGG | + | chr2_1:17631962-17631981 | Msa0198870:intron | 40.0% |
TCTCTTGGAATCACTTCTTG+TGG | - | chr2_1:17632038-17632057 | None:intergenic | 40.0% | |
GATGAAGATGATGAGTCTCT+TGG | - | chr2_1:17632053-17632072 | None:intergenic | 40.0% | |
AACCAAATGGAGTTGTGTTG+TGG | - | chr2_1:17632160-17632179 | None:intergenic | 40.0% | |
! | AGAGCTTCTCTGTATGGTTT+TGG | + | chr2_1:17632308-17632327 | Msa0198870:CDS | 40.0% |
TCTGATGGAAGAGTGAAAAG+TGG | + | chr2_1:17632467-17632486 | Msa0198870:CDS | 40.0% | |
CTGATGGAAGAGTGAAAAGT+GGG | + | chr2_1:17632468-17632487 | Msa0198870:CDS | 40.0% | |
AAGAAGCAAAACACCATGTG+TGG | - | chr2_1:17632495-17632514 | None:intergenic | 40.0% | |
CGGTGATCGTCTTACTTATA+AGG | + | chr2_1:17632544-17632563 | Msa0198870:CDS | 40.0% | |
CTTACTTATAAGGTGATCGG+TGG | + | chr2_1:17632554-17632573 | Msa0198870:CDS | 40.0% | |
CCAAAAGACCAATAAGGCAT+AGG | - | chr2_1:17632662-17632681 | None:intergenic | 40.0% | |
!!! | CCTATGCCTTATTGGTCTTT+TGG | + | chr2_1:17632659-17632678 | Msa0198870:CDS | 40.0% |
!! | CGATGACTGATATTGGTTCT+CGG | + | chr2_1:17632843-17632862 | Msa0198870:intron | 40.0% |
!! | GATGACTGATATTGGTTCTC+GGG | + | chr2_1:17632844-17632863 | Msa0198870:intron | 40.0% |
TCTCAGATGTTACAACAAGG+AGG | - | chr2_1:17632886-17632905 | None:intergenic | 40.0% | |
AAACACCAATGACATCTGAC+GGG | - | chr2_1:17633036-17633055 | None:intergenic | 40.0% | |
GAAACACCAATGACATCTGA+CGG | - | chr2_1:17633037-17633056 | None:intergenic | 40.0% | |
!! | AGGTGTTGAAAACTCAAGTG+TGG | + | chr2_1:17633260-17633279 | Msa0198870:intron | 40.0% |
TGTTGAAAACTCAAGTGTGG+AGG | + | chr2_1:17633263-17633282 | Msa0198870:intron | 40.0% | |
GTTGAAAACTCAAGTGTGGA+GGG | + | chr2_1:17633264-17633283 | Msa0198870:intron | 40.0% | |
AGCCCCTATTAAGTTAGGAA+TGG | + | chr2_1:17633289-17633308 | Msa0198870:intron | 40.0% | |
! | GGTTTTCATCAATGTCGATG+GGG | + | chr2_1:17633519-17633538 | Msa0198870:intron | 40.0% |
GTAACCAACTATGCAAAAGC+TGG | + | chr2_1:17633573-17633592 | Msa0198870:CDS | 40.0% | |
ATCTGTCCACATAACTTCGA+GGG | - | chr2_1:17633604-17633623 | None:intergenic | 40.0% | |
TATCTGTCCACATAACTTCG+AGG | - | chr2_1:17633605-17633624 | None:intergenic | 40.0% | |
TATGTGCTTATCTTGGATCC+AGG | + | chr2_1:17633729-17633748 | Msa0198870:CDS | 40.0% | |
!! | TTGCAGCTATTTGATGATGC+CGG | - | chr2_1:17633805-17633824 | None:intergenic | 40.0% |
!! | TAGTGTTCTGGTTTCCATAG+AGG | - | chr2_1:17633866-17633885 | None:intergenic | 40.0% |
ATATTGCGCTAGTAGTGTTC+TGG | - | chr2_1:17633878-17633897 | None:intergenic | 40.0% | |
GAACACTACTAGCGCAATAT+TGG | + | chr2_1:17633878-17633897 | Msa0198870:intron | 40.0% | |
GCTAGGAAAAACTGGAATAG+TGG | - | chr2_1:17633906-17633925 | None:intergenic | 40.0% | |
CTACATCAGCTAGGAAAAAC+TGG | - | chr2_1:17633914-17633933 | None:intergenic | 40.0% | |
AGCATATCTTGTACACTGGA+AGG | - | chr2_1:17634083-17634102 | None:intergenic | 40.0% | |
GCAAAGCATATCTTGTACAC+TGG | - | chr2_1:17634087-17634106 | None:intergenic | 40.0% | |
GAAATAGGAGATAGTGTTGC+TGG | - | chr2_1:17634206-17634225 | None:intergenic | 40.0% | |
!! | CAGCGGATTATGGAAAATAC+AGG | - | chr2_1:17634250-17634269 | None:intergenic | 40.0% |
AGCTTGTAAGCCTCTAACAT+AGG | - | chr2_1:17634367-17634386 | None:intergenic | 40.0% | |
! | ACCCTCATAGCCAAGAATTT+TGG | + | chr2_1:17634466-17634485 | Msa0198870:CDS | 40.0% |
CCCAAAATTCTTGGCTATGA+GGG | - | chr2_1:17634470-17634489 | None:intergenic | 40.0% | |
! | CCCTCATAGCCAAGAATTTT+GGG | + | chr2_1:17634467-17634486 | Msa0198870:CDS | 40.0% |
! | CCTCATAGCCAAGAATTTTG+GGG | + | chr2_1:17634468-17634487 | Msa0198870:CDS | 40.0% |
GGCACCGTTAAATCGTTAAT+TGG | - | chr2_1:17634645-17634664 | None:intergenic | 40.0% | |
!! | TAAGGCCATGTTGGTTGTTT+TGG | - | chr2_1:17634736-17634755 | None:intergenic | 40.0% |
TATTTCCACTAAGGCCATGT+TGG | - | chr2_1:17634745-17634764 | None:intergenic | 40.0% | |
! | ATGGCCTTAGTGGAAATAAC+TGG | + | chr2_1:17634747-17634766 | Msa0198870:CDS | 40.0% |
AAGTATACAGCTCATTGGAC+AGG | + | chr2_1:17634816-17634835 | Msa0198870:CDS | 40.0% | |
!! | TGGCATCTTTGGAATTCCAA+TGG | + | chr2_1:17634896-17634915 | Msa0198870:CDS | 40.0% |
CATATATCTGCTCCAACCAT+TGG | - | chr2_1:17634915-17634934 | None:intergenic | 40.0% | |
ATGGTTGGAGCAGATATATG+TGG | + | chr2_1:17634915-17634934 | Msa0198870:CDS | 40.0% | |
! | GAAGATCAGTGTTTGTTACC+TGG | - | chr2_1:17634983-17635002 | None:intergenic | 40.0% |
TGCCGTGGGACTTATTTATA+AGG | + | chr2_1:17635220-17635239 | Msa0198870:intron | 40.0% | |
ATCTCTTGCAAAGGGGTAAA+AGG | - | chr2_1:17635484-17635503 | None:intergenic | 40.0% | |
CTGAATGATCTCTTGCAAAG+GGG | - | chr2_1:17635491-17635510 | None:intergenic | 40.0% | |
GCTGAATGATCTCTTGCAAA+GGG | - | chr2_1:17635492-17635511 | None:intergenic | 40.0% | |
AGCTGAATGATCTCTTGCAA+AGG | - | chr2_1:17635493-17635512 | None:intergenic | 40.0% | |
TCGTATGTTGTGATATCCTC+GGG | - | chr2_1:17635678-17635697 | None:intergenic | 40.0% | |
ACACAGTTTCTTCTAGGCAA+AGG | + | chr2_1:17635705-17635724 | Msa0198870:CDS | 40.0% | |
TCTGCACTCACTGAATTTGA+GGG | - | chr2_1:17635816-17635835 | None:intergenic | 40.0% | |
TTCTGCACTCACTGAATTTG+AGG | - | chr2_1:17635817-17635836 | None:intergenic | 40.0% | |
AATTCAGTGAGTGCAGAATC+AGG | + | chr2_1:17635819-17635838 | Msa0198870:CDS | 40.0% | |
ATAAATGTGCATGTTGGCGA+AGG | + | chr2_1:17635876-17635895 | Msa0198870:CDS | 40.0% | |
! | TGTTGGCGAAGGTAACATTT+TGG | + | chr2_1:17635887-17635906 | Msa0198870:CDS | 40.0% |
GAACACCTCATTCGAACTAT+TGG | + | chr2_1:17635947-17635966 | Msa0198870:CDS | 40.0% | |
TGGGGATACCTAATTATGGT+AGG | + | chr2_1:17636174-17636193 | Msa0198870:CDS | 40.0% | |
GTCTGAGAGTGAGTTAAATG+TGG | + | chr2_1:17636214-17636233 | Msa0198870:CDS | 40.0% | |
AGTGAGTTAAATGTGGTGAG+TGG | + | chr2_1:17636221-17636240 | Msa0198870:CDS | 40.0% | |
! | CCCTTGTTTCACCTTAGTTA+AGG | + | chr2_1:17636445-17636464 | Msa0198870:intron | 40.0% |
!! | GAGACAAGCCATGTTGACTT+AGG | - | chr2_1:17631488-17631507 | None:intergenic | 45.0% |
AGGTTGAGAAGTGGAATGTC+GGG | - | chr2_1:17631840-17631859 | None:intergenic | 45.0% | |
GAGGTTGAGAAGTGGAATGT+CGG | - | chr2_1:17631841-17631860 | None:intergenic | 45.0% | |
TAGTTAGTTACCTGGCACTG+AGG | - | chr2_1:17631860-17631879 | None:intergenic | 45.0% | |
CTCCACAACACAACTCCATT+TGG | + | chr2_1:17632155-17632174 | Msa0198870:CDS | 45.0% | |
! | CGCGTGATAGTGAAACCAAA+TGG | - | chr2_1:17632173-17632192 | None:intergenic | 45.0% |
TCAGGGTTTAAAGGGTCTTC+TGG | - | chr2_1:17632230-17632249 | None:intergenic | 45.0% | |
!! | AGCTCTTTTTGAAGGCAGAG+AGG | - | chr2_1:17632294-17632313 | None:intergenic | 45.0% |
GTGAGAAAGGGTTCATCTGA+TGG | + | chr2_1:17632452-17632471 | Msa0198870:CDS | 45.0% | |
!! | TGCTGGTTCATCTCCTGAAT+TGG | + | chr2_1:17632598-17632617 | Msa0198870:CDS | 45.0% |
! | GTCTTTTGGTAAGTCCAGCA+TGG | + | chr2_1:17632673-17632692 | Msa0198870:intron | 45.0% |
! | TTTTAATAGGCGGTCAGTCG+TGG | + | chr2_1:17632789-17632808 | Msa0198870:intron | 45.0% |
CTGTCAAACTGACACCGATA+AGG | + | chr2_1:17632981-17633000 | Msa0198870:intron | 45.0% | |
CTTCAGCTGACCTTCTATCA+AGG | + | chr2_1:17633079-17633098 | Msa0198870:intron | 45.0% | |
CGATTACGGCCACAACTTAA+AGG | - | chr2_1:17633183-17633202 | None:intergenic | 45.0% | |
!! | AATTTTAATGCCTGGAGCCC+TGG | - | chr2_1:17633398-17633417 | None:intergenic | 45.0% |
GTATACCCCTCGAAGTTATG+TGG | + | chr2_1:17633595-17633614 | Msa0198870:CDS | 45.0% | |
TCTGTCCACATAACTTCGAG+GGG | - | chr2_1:17633603-17633622 | None:intergenic | 45.0% | |
ATCTGCATATGGGCCAAACA+TGG | + | chr2_1:17633990-17634009 | Msa0198870:intron | 45.0% | |
!! | TTGTTGTCGACAGCGGATTA+TGG | - | chr2_1:17634260-17634279 | None:intergenic | 45.0% |
TAGCACATTGTTGTCGACAG+CGG | - | chr2_1:17634267-17634286 | None:intergenic | 45.0% | |
TATCTAGGAGAAGTTTGGCC+AGG | + | chr2_1:17634417-17634436 | Msa0198870:CDS | 45.0% | |
TCAGGATAGTAAACTGGTCC+TGG | - | chr2_1:17634438-17634457 | None:intergenic | 45.0% | |
CCCCAAAATTCTTGGCTATG+AGG | - | chr2_1:17634471-17634490 | None:intergenic | 45.0% | |
! | AGGGAACTTCTCCCTTTTGA+TGG | + | chr2_1:17634510-17634529 | Msa0198870:CDS | 45.0% |
! | AACAACCAACATGGCCTTAG+TGG | + | chr2_1:17634737-17634756 | Msa0198870:CDS | 45.0% |
CTGGCAAGTATACAGCTCAT+TGG | + | chr2_1:17634811-17634830 | Msa0198870:CDS | 45.0% | |
CAGGAGATAATGCTGCTACA+TGG | + | chr2_1:17634835-17634854 | Msa0198870:CDS | 45.0% | |
! | TAAGAATGGAGGTGTGTCTG+AGG | - | chr2_1:17635107-17635126 | None:intergenic | 45.0% |
TGCAGCTGATATAGCCTCAA+TGG | + | chr2_1:17635148-17635167 | Msa0198870:intron | 45.0% | |
AAAGGCCCCTAACTACATTC+AGG | - | chr2_1:17635466-17635485 | None:intergenic | 45.0% | |
AAGGTAAAGCTCTTGCCTGA+TGG | - | chr2_1:17635523-17635542 | None:intergenic | 45.0% | |
TCAGGCAAGAGCTTTACCTT+TGG | + | chr2_1:17635523-17635542 | Msa0198870:CDS | 45.0% | |
CAGGCAAGAGCTTTACCTTT+GGG | + | chr2_1:17635524-17635543 | Msa0198870:CDS | 45.0% | |
ATGCTGCAACTGAATCCCAA+AGG | - | chr2_1:17635542-17635561 | None:intergenic | 45.0% | |
TGGAAGAAGACGGTAACGAA+GGG | - | chr2_1:17635583-17635602 | None:intergenic | 45.0% | |
ATGGAAGAAGACGGTAACGA+AGG | - | chr2_1:17635584-17635603 | None:intergenic | 45.0% | |
TCGGGGAATGAAAAGAGAAG+TGG | - | chr2_1:17635660-17635679 | None:intergenic | 45.0% | |
! | ACTTCTCTTTTCATTCCCCG+AGG | + | chr2_1:17635659-17635678 | Msa0198870:CDS | 45.0% |
CGTATGTTGTGATATCCTCG+GGG | - | chr2_1:17635677-17635696 | None:intergenic | 45.0% | |
GTCGATGCATACTTTCCTAG+AGG | + | chr2_1:17635768-17635787 | Msa0198870:CDS | 45.0% | |
CAATGACAACCAAAGCAGCT+CGG | + | chr2_1:17635925-17635944 | Msa0198870:CDS | 45.0% | |
!! | ATTAAAAAAAAAAAAAAGAA+TGG | - | chr2_1:17634112-17634131 | None:intergenic | 5.0% |
GTGAAAAGTGGGACCACACA+TGG | + | chr2_1:17632479-17632498 | Msa0198870:CDS | 50.0% | |
GACTGAGTGGGTGACCTTAT+CGG | - | chr2_1:17632998-17633017 | None:intergenic | 50.0% | |
CATCATCCTCACGACTGAGT+GGG | - | chr2_1:17633010-17633029 | None:intergenic | 50.0% | |
TCATCATCCTCACGACTGAG+TGG | - | chr2_1:17633011-17633030 | None:intergenic | 50.0% | |
TGAGTCCCGTCAGATGTCAT+TGG | + | chr2_1:17633028-17633047 | Msa0198870:intron | 50.0% | |
CAGCTGACCTTCTATCAAGG+TGG | + | chr2_1:17633082-17633101 | Msa0198870:intron | 50.0% | |
CGGTAGACCACCTTGATAGA+AGG | - | chr2_1:17633092-17633111 | None:intergenic | 50.0% | |
GGGCAAGCCCCTATTAAGTT+AGG | + | chr2_1:17633284-17633303 | Msa0198870:intron | 50.0% | |
GGGCTGTCAAGACTAGAATG+TGG | - | chr2_1:17634588-17634607 | None:intergenic | 50.0% | |
CTGAAGAACTTTGTCGGCGA+TGG | + | chr2_1:17634955-17634974 | Msa0198870:CDS | 50.0% | |
TGTGATTACGGCTGCCATTG+AGG | - | chr2_1:17635165-17635184 | None:intergenic | 50.0% | |
ATAAGTCCCACGGCACAATG+TGG | - | chr2_1:17635215-17635234 | None:intergenic | 50.0% | |
CAAAAGGGACACCAATTGCG+CGG | + | chr2_1:17635634-17635653 | Msa0198870:CDS | 50.0% | |
GTCTCACCTGTGCTACAATC+TGG | + | chr2_1:17635735-17635754 | Msa0198870:CDS | 50.0% | |
ACTGCACCAGATTGTAGCAC+AGG | - | chr2_1:17635744-17635763 | None:intergenic | 50.0% | |
GGTGAGGCTCTTGATCTAGA+AGG | + | chr2_1:17636020-17636039 | Msa0198870:CDS | 50.0% | |
AATGTCGGGTCCGAAAACCG+AGG | - | chr2_1:17631826-17631845 | None:intergenic | 55.0% | |
! | CTGGCACTGAGGTTGAGAAG+TGG | - | chr2_1:17631849-17631868 | None:intergenic | 55.0% |
CACTTCTCAACCTCAGTGCC+AGG | + | chr2_1:17631847-17631866 | Msa0198870:CDS | 55.0% | |
GACCAATAAGGCATAGGGGC+AGG | - | chr2_1:17632656-17632675 | None:intergenic | 55.0% | |
ATAGGCGGTCAGTCGTGGAT+CGG | + | chr2_1:17632794-17632813 | Msa0198870:intron | 55.0% | |
ATGCATTAGTCCAGGGCTCC+AGG | + | chr2_1:17633385-17633404 | Msa0198870:intron | 55.0% | |
ACTTTGTCGGCGATGGATCC+AGG | + | chr2_1:17634962-17634981 | Msa0198870:CDS | 55.0% | |
AAGAGAAGTGGCCGCGCAAT+TGG | - | chr2_1:17635648-17635667 | None:intergenic | 55.0% | |
! | TGAGGTGTTCCGAGCTGCTT+TGG | - | chr2_1:17635937-17635956 | None:intergenic | 55.0% |
GGCCTGCCCCTATGCCTTAT+TGG | + | chr2_1:17632651-17632670 | Msa0198870:CDS | 60.0% | |
AGGTCACCCACTCAGTCGTG+AGG | + | chr2_1:17633001-17633020 | Msa0198870:intron | 60.0% | |
TTGCGGTCCACATTGTGCCG+TGG | + | chr2_1:17635205-17635224 | Msa0198870:intron | 60.0% | |
TGCGGTCCACATTGTGCCGT+GGG | + | chr2_1:17635206-17635225 | Msa0198870:intron | 60.0% | |
GTCGGGTCCGAAAACCGAGG+AGG | - | chr2_1:17631823-17631842 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 17631417 | 17636556 | 17631417 | ID=Msa0198870;Name=Msa0198870 |
chr2_1 | mRNA | 17631417 | 17636556 | 17631417 | ID=Msa0198870-mRNA-1;Parent=Msa0198870;Name=Msa0198870-mRNA-1;_AED=0.11;_eAED=0.11;_QI=161|1|1|1|0.66|0.42|7|157|913 |
chr2_1 | exon | 17631417 | 17631553 | 17631417 | ID=Msa0198870-mRNA-1:exon:7481;Parent=Msa0198870-mRNA-1 |
chr2_1 | exon | 17631591 | 17631868 | 17631591 | ID=Msa0198870-mRNA-1:exon:7482;Parent=Msa0198870-mRNA-1 |
chr2_1 | exon | 17631971 | 17632680 | 17631971 | ID=Msa0198870-mRNA-1:exon:7483;Parent=Msa0198870-mRNA-1 |
chr2_1 | exon | 17633520 | 17633750 | 17633520 | ID=Msa0198870-mRNA-1:exon:7484;Parent=Msa0198870-mRNA-1 |
chr2_1 | exon | 17634337 | 17634983 | 17634337 | ID=Msa0198870-mRNA-1:exon:7485;Parent=Msa0198870-mRNA-1 |
chr2_1 | exon | 17635474 | 17636461 | 17635474 | ID=Msa0198870-mRNA-1:exon:7486;Parent=Msa0198870-mRNA-1 |
chr2_1 | exon | 17636488 | 17636556 | 17636488 | ID=Msa0198870-mRNA-1:exon:7487;Parent=Msa0198870-mRNA-1 |
chr2_1 | five_prime_UTR | 17631417 | 17631553 | 17631417 | ID=Msa0198870-mRNA-1:five_prime_utr;Parent=Msa0198870-mRNA-1 |
chr2_1 | five_prime_UTR | 17631591 | 17631614 | 17631591 | ID=Msa0198870-mRNA-1:five_prime_utr;Parent=Msa0198870-mRNA-1 |
chr2_1 | CDS | 17631615 | 17631868 | 17631615 | ID=Msa0198870-mRNA-1:cds;Parent=Msa0198870-mRNA-1 |
chr2_1 | CDS | 17631971 | 17632680 | 17631971 | ID=Msa0198870-mRNA-1:cds;Parent=Msa0198870-mRNA-1 |
chr2_1 | CDS | 17633520 | 17633750 | 17633520 | ID=Msa0198870-mRNA-1:cds;Parent=Msa0198870-mRNA-1 |
chr2_1 | CDS | 17634337 | 17634983 | 17634337 | ID=Msa0198870-mRNA-1:cds;Parent=Msa0198870-mRNA-1 |
chr2_1 | CDS | 17635474 | 17636373 | 17635474 | ID=Msa0198870-mRNA-1:cds;Parent=Msa0198870-mRNA-1 |
chr2_1 | three_prime_UTR | 17636374 | 17636461 | 17636374 | ID=Msa0198870-mRNA-1:three_prime_utr;Parent=Msa0198870-mRNA-1 |
chr2_1 | three_prime_UTR | 17636488 | 17636556 | 17636488 | ID=Msa0198870-mRNA-1:three_prime_utr;Parent=Msa0198870-mRNA-1 |
Gene Sequence |
Protein sequence |