Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0534730 | XP_013454907.1 | 95.617 | 616 | 12 | 5 | 1 | 616 | 1 | 601 | 0.0 | 1200 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0534730 | sp|Q9LZM8|BLH9_ARATH | 45.962 | 520 | 191 | 15 | 140 | 616 | 103 | 575 | 1.41e-111 | 349 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0534730 | A0A072USU8 | 95.617 | 616 | 12 | 5 | 1 | 616 | 1 | 601 | 0.0 | 1200 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0534730 | TF | HB-BELL |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014710 | Msa0534730 | 0.802575 | 5.256740e-49 | -8.615850e-47 |
| Msa0026490 | Msa0534730 | 0.812866 | 3.417802e-51 | -8.615850e-47 |
| Msa0032320 | Msa0534730 | 0.803504 | 3.378518e-49 | -8.615850e-47 |
| Msa0036140 | Msa0534730 | 0.810173 | 1.315049e-50 | -8.615850e-47 |
| Msa0037700 | Msa0534730 | 0.808593 | 2.869384e-50 | -8.615850e-47 |
| Msa0040450 | Msa0534730 | 0.821237 | 4.492988e-53 | -8.615850e-47 |
| Msa0048000 | Msa0534730 | 0.801769 | 7.699861e-49 | -8.615850e-47 |
| Msa0063350 | Msa0534730 | -0.804680 | 1.922741e-49 | -8.615850e-47 |
| Msa0084080 | Msa0534730 | 0.826127 | 3.216456e-54 | -8.615850e-47 |
| Msa0140860 | Msa0534730 | 0.839784 | 1.287958e-57 | -8.615850e-47 |
| Msa0145310 | Msa0534730 | 0.835612 | 1.516048e-56 | -8.615850e-47 |
| Msa0145410 | Msa0534730 | 0.806206 | 9.203818e-50 | -8.615850e-47 |
| Msa0191250 | Msa0534730 | 0.805308 | 1.421552e-49 | -8.615850e-47 |
| Msa0197660 | Msa0534730 | 0.816717 | 4.789806e-52 | -8.615850e-47 |
| Msa0206790 | Msa0534730 | 0.804347 | 2.256675e-49 | -8.615850e-47 |
| Msa0213040 | Msa0534730 | 0.814284 | 1.666419e-51 | -8.615850e-47 |
| Msa0223410 | Msa0534730 | -0.805647 | 1.206460e-49 | -8.615850e-47 |
| Msa0369440 | Msa0534730 | 0.819376 | 1.199580e-52 | -8.615850e-47 |
| Msa0373930 | Msa0534730 | 0.805491 | 1.301363e-49 | -8.615850e-47 |
| Msa0376910 | Msa0534730 | 0.800376 | 1.483839e-48 | -8.615850e-47 |
| Msa0389340 | Msa0534730 | 0.814093 | 1.836260e-51 | -8.615850e-47 |
| Msa0389810 | Msa0534730 | 0.804740 | 1.868305e-49 | -8.615850e-47 |
| Msa0394340 | Msa0534730 | 0.802131 | 6.489334e-49 | -8.615850e-47 |
| Msa0412840 | Msa0534730 | 0.827461 | 1.544830e-54 | -8.615850e-47 |
| Msa0415980 | Msa0534730 | 0.812226 | 4.716906e-51 | -8.615850e-47 |
| Msa0428050 | Msa0534730 | 0.802403 | 5.704332e-49 | -8.615850e-47 |
| Msa0433410 | Msa0534730 | -0.830714 | 2.513006e-55 | -8.615850e-47 |
| Msa0433640 | Msa0534730 | 0.820056 | 8.391805e-53 | -8.615850e-47 |
| Msa0442200 | Msa0534730 | 0.804814 | 1.802778e-49 | -8.615850e-47 |
| Msa0446580 | Msa0534730 | 0.802195 | 6.294238e-49 | -8.615850e-47 |
| Msa0453330 | Msa0534730 | 0.821892 | 3.170610e-53 | -8.615850e-47 |
| Msa0456910 | Msa0534730 | 0.821604 | 3.695476e-53 | -8.615850e-47 |
| Msa0457510 | Msa0534730 | 0.821962 | 3.054055e-53 | -8.615850e-47 |
| Msa0464900 | Msa0534730 | 0.805159 | 1.526809e-49 | -8.615850e-47 |
| Msa0469940 | Msa0534730 | -0.809151 | 2.179905e-50 | -8.615850e-47 |
| Msa0477130 | Msa0534730 | -0.808193 | 3.492611e-50 | -8.615850e-47 |
| Msa0481530 | Msa0534730 | 0.809531 | 1.807576e-50 | -8.615850e-47 |
| Msa0239800 | Msa0534730 | 0.818663 | 1.742452e-52 | -8.615850e-47 |
| Msa0241470 | Msa0534730 | 0.817568 | 3.082903e-52 | -8.615850e-47 |
| Msa0250670 | Msa0534730 | 0.802131 | 6.489334e-49 | -8.615850e-47 |
| Msa0253340 | Msa0534730 | 0.806144 | 9.485062e-50 | -8.615850e-47 |
| Msa0260810 | Msa0534730 | 0.802982 | 4.333047e-49 | -8.615850e-47 |
| Msa0268090 | Msa0534730 | 0.822800 | 1.950978e-53 | -8.615850e-47 |
| Msa0270100 | Msa0534730 | 0.800017 | 1.755114e-48 | -8.615850e-47 |
| Msa0292120 | Msa0534730 | 0.801618 | 8.271891e-49 | -8.615850e-47 |
| Msa0292170 | Msa0534730 | 0.814389 | 1.579924e-51 | -8.615850e-47 |
| Msa0299730 | Msa0534730 | 0.801125 | 1.043674e-48 | -8.615850e-47 |
| Msa0306210 | Msa0534730 | -0.809614 | 1.734511e-50 | -8.615850e-47 |
| Msa0311860 | Msa0534730 | 0.800148 | 1.650855e-48 | -8.615850e-47 |
| Msa0317510 | Msa0534730 | 0.823087 | 1.673258e-53 | -8.615850e-47 |
| Msa0326520 | Msa0534730 | 0.808189 | 3.499693e-50 | -8.615850e-47 |
| Msa0327410 | Msa0534730 | 0.804381 | 2.220229e-49 | -8.615850e-47 |
| Msa0335040 | Msa0534730 | 0.801448 | 8.960769e-49 | -8.615850e-47 |
| Msa0336310 | Msa0534730 | 0.805960 | 1.037079e-49 | -8.615850e-47 |
| Msa0336320 | Msa0534730 | 0.812616 | 3.876324e-51 | -8.615850e-47 |
| Msa0344690 | Msa0534730 | -0.808877 | 2.495519e-50 | -8.615850e-47 |
| Msa0345970 | Msa0534730 | 0.803657 | 3.140533e-49 | -8.615850e-47 |
| Msa0362780 | Msa0534730 | 0.806277 | 8.896001e-50 | -8.615850e-47 |
| Msa0484780 | Msa0534730 | 0.824077 | 9.815187e-54 | -8.615850e-47 |
| Msa0485120 | Msa0534730 | 0.808632 | 2.815303e-50 | -8.615850e-47 |
| Msa0512870 | Msa0534730 | 0.825800 | 3.846227e-54 | -8.615850e-47 |
| Msa0512900 | Msa0534730 | 0.801720 | 7.882107e-49 | -8.615850e-47 |
| Msa0521540 | Msa0534730 | 0.819553 | 1.093514e-52 | -8.615850e-47 |
| Msa0523460 | Msa0534730 | 0.804862 | 1.761702e-49 | -8.615850e-47 |
| Msa0529890 | Msa0534730 | 0.800742 | 1.249704e-48 | -8.615850e-47 |
| Msa0534730 | Msa0555020 | 0.804425 | 2.173327e-49 | -8.615850e-47 |
| Msa0534730 | Msa0558690 | 0.816792 | 4.606972e-52 | -8.615850e-47 |
| Msa0534730 | Msa0561230 | 0.818446 | 1.951529e-52 | -8.615850e-47 |
| Msa0534730 | Msa0563840 | 0.800545 | 1.370371e-48 | -8.615850e-47 |
| Msa0534730 | Msa0571780 | 0.808157 | 3.555923e-50 | -8.615850e-47 |
| Msa0534730 | Msa0575470 | 0.805702 | 1.175173e-49 | -8.615850e-47 |
| Msa0534730 | Msa0577500 | 0.817186 | 3.757540e-52 | -8.615850e-47 |
| Msa0534730 | Msa0579130 | 0.808867 | 2.508282e-50 | -8.615850e-47 |
| Msa0534730 | Msa0585560 | 0.807359 | 5.253625e-50 | -8.615850e-47 |
| Msa0534730 | Msa0625720 | 0.800488 | 1.408045e-48 | -8.615850e-47 |
| Msa0534730 | Msa0626220 | 0.804138 | 2.494803e-49 | -8.615850e-47 |
| Msa0534730 | Msa0631200 | 0.897046 | 2.054718e-76 | -8.615850e-47 |
| Msa0534730 | Msa0651270 | 0.825198 | 5.342204e-54 | -8.615850e-47 |
| Msa0534730 | Msa0654010 | 0.801658 | 8.116593e-49 | -8.615850e-47 |
| Msa0534730 | Msa0654720 | 0.802691 | 4.975487e-49 | -8.615850e-47 |
| Msa0534730 | Msa0657610 | 0.809136 | 2.196279e-50 | -8.615850e-47 |
| Msa0534730 | Msa0658570 | 0.801723 | 7.871939e-49 | -8.615850e-47 |
| Msa0534730 | Msa0663390 | 0.803965 | 2.709868e-49 | -8.615850e-47 |
| Msa0534730 | Msa0669440 | 0.865022 | 7.979892e-65 | -8.615850e-47 |
| Msa0534730 | Msa0677080 | 0.838634 | 2.560007e-57 | -8.615850e-47 |
| Msa0534730 | Msa0692230 | 0.820592 | 6.322145e-53 | -8.615850e-47 |
| Msa0534730 | Msa0693380 | 0.838860 | 2.236744e-57 | -8.615850e-47 |
| Msa0534730 | Msa0704920 | 0.800675 | 1.289662e-48 | -8.615850e-47 |
| Msa0534730 | Msa0711790 | 0.829698 | 4.451110e-55 | -8.615850e-47 |
| Msa0534730 | Msa0715410 | 0.804604 | 1.994519e-49 | -8.615850e-47 |
| Msa0534730 | Msa0721280 | 0.803732 | 3.029606e-49 | -8.615850e-47 |
| Msa0534730 | Msa0726830 | 0.803691 | 3.089359e-49 | -8.615850e-47 |
| Msa0534730 | Msa0731180 | 0.802877 | 4.554275e-49 | -8.615850e-47 |
| Msa0534730 | Msa0750430 | 0.801998 | 6.909022e-49 | -8.615850e-47 |
| Msa0534730 | Msa0762970 | 0.833169 | 6.221399e-56 | -8.615850e-47 |
| Msa0534730 | Msa0793140 | -0.837534 | 4.911751e-57 | -8.615850e-47 |
| Msa0534730 | Msa0805430 | 0.806691 | 7.273220e-50 | -8.615850e-47 |
| Msa0534730 | Msa0830530 | 0.824137 | 9.499249e-54 | -8.615850e-47 |
| Msa0534730 | Msa0832150 | 0.808954 | 2.402419e-50 | -8.615850e-47 |
| Msa0534730 | Msa0864470 | -0.800357 | 1.496973e-48 | -8.615850e-47 |
| Msa0534730 | Msa0895790 | 0.801318 | 9.527047e-49 | -8.615850e-47 |
| Msa0534730 | Msa0942550 | -0.811107 | 8.260818e-51 | -8.615850e-47 |
| Msa0534730 | Msa0942560 | -0.828520 | 8.588919e-55 | -8.615850e-47 |
| Msa0534730 | Msa0945120 | 0.803985 | 2.683920e-49 | -8.615850e-47 |
| Msa0534730 | Msa0982270 | 0.811941 | 5.441578e-51 | -8.615850e-47 |
| Msa0534730 | Msa0990580 | 0.803841 | 2.875065e-49 | -8.615850e-47 |
| Msa0534730 | Msa1006850 | 0.805998 | 1.018453e-49 | -8.615850e-47 |
| Msa0534730 | Msa1021510 | 0.810980 | 8.798569e-51 | -8.615850e-47 |
| Msa0534730 | Msa1021540 | 0.808277 | 3.352466e-50 | -8.615850e-47 |
| Msa0534730 | Msa1031770 | 0.807963 | 3.909590e-50 | -8.615850e-47 |
| Msa0534730 | Msa1078710 | 0.818584 | 1.816741e-52 | -8.615850e-47 |
| Msa0534730 | Msa1079730 | -0.800474 | 1.417093e-48 | -8.615850e-47 |
| Msa0534730 | Msa1080270 | 0.802768 | 4.796464e-49 | -8.615850e-47 |
| Msa0534730 | Msa1082500 | 0.830293 | 3.185829e-55 | -8.615850e-47 |
| Msa0534730 | Msa1085200 | 0.800567 | 1.356394e-48 | -8.615850e-47 |
| Msa0534730 | Msa1085300 | 0.808227 | 3.435368e-50 | -8.615850e-47 |
| Msa0534730 | Msa1090260 | 0.809002 | 2.345996e-50 | -8.615850e-47 |
| Msa0534730 | Msa1105500 | 0.804956 | 1.684057e-49 | -8.615850e-47 |
| Msa0534730 | Msa1116130 | -0.810745 | 9.892378e-51 | -8.615850e-47 |
| Msa0534730 | Msa1124540 | -0.827429 | 1.572025e-54 | -8.615850e-47 |
| Msa0534730 | Msa1131220 | 0.828180 | 1.037288e-54 | -8.615850e-47 |
| Msa0534730 | Msa1133710 | 0.817576 | 3.069593e-52 | -8.615850e-47 |
| Msa0534730 | Msa1143930 | -0.800322 | 1.521748e-48 | -8.615850e-47 |
| Msa0534730 | Msa1144720 | -0.805057 | 1.604018e-49 | -8.615850e-47 |
| Msa0534730 | Msa1168040 | -0.800620 | 1.323005e-48 | -8.615850e-47 |
| Msa0534730 | Msa1183100 | -0.845107 | 4.991725e-59 | -8.615850e-47 |
| Msa0534730 | Msa1202770 | -0.800100 | 1.688900e-48 | -8.615850e-47 |
| Msa0534730 | Msa1204530 | 0.816873 | 4.417299e-52 | -8.615850e-47 |
| Msa0534730 | Msa1204630 | 0.823215 | 1.561665e-53 | -8.615850e-47 |
| Msa0534730 | Msa1219810 | 0.806264 | 8.949514e-50 | -8.615850e-47 |
| Msa0534730 | Msa1236890 | 0.801447 | 8.967316e-49 | -8.615850e-47 |
| Msa0534730 | Msa1267060 | 0.838296 | 3.128361e-57 | -8.615850e-47 |
| Msa0534730 | Msa1302190 | -0.807056 | 6.091444e-50 | -8.615850e-47 |
| Msa0534730 | Msa1305190 | 0.836423 | 9.439555e-57 | -8.615850e-47 |
| Msa0534730 | Msa1305340 | 0.842830 | 2.034554e-58 | -8.615850e-47 |
| Msa0534730 | Msa1306430 | 0.802394 | 5.729533e-49 | -8.615850e-47 |
| Msa0534730 | Msa1306840 | 0.822234 | 2.641629e-53 | -8.615850e-47 |
| Msa0534730 | Msa1306850 | 0.817394 | 3.373575e-52 | -8.615850e-47 |
| Msa0534730 | Msa1307740 | 0.803715 | 3.053761e-49 | -8.615850e-47 |
| Msa0534730 | Msa1322190 | 0.802009 | 6.873275e-49 | -8.615850e-47 |
| Msa0534730 | Msa1331000 | 0.805631 | 1.216079e-49 | -8.615850e-47 |
| Msa0534730 | Msa1340260 | 0.808190 | 3.498140e-50 | -8.615850e-47 |
| Msa0534730 | Msa1348470 | -0.821999 | 2.994920e-53 | -8.615850e-47 |
| Msa0534730 | Msa1357890 | 0.803649 | 3.152162e-49 | -8.615850e-47 |
| Msa0534730 | Msa1376130 | 0.821843 | 3.253778e-53 | -8.615850e-47 |
| Msa0534730 | Msa1376890 | 0.808274 | 3.356684e-50 | -8.615850e-47 |
| Msa0534730 | Msa1377570 | 0.820481 | 6.705488e-53 | -8.615850e-47 |
| Msa0534730 | Msa1384350 | 0.815606 | 8.479936e-52 | -8.615850e-47 |
| Msa0534730 | Msa1390700 | 0.801272 | 9.737757e-49 | -8.615850e-47 |
| Msa0534730 | Msa1392260 | 0.800686 | 1.282789e-48 | -8.615850e-47 |
| Msa0534730 | Msa1397120 | 0.809349 | 1.976940e-50 | -8.615850e-47 |
| Msa0534730 | Msa1398090 | 0.804127 | 2.507839e-49 | -8.615850e-47 |
| Msa0534730 | Msa1401530 | 0.828600 | 8.216778e-55 | -8.615850e-47 |
| Msa0534730 | Msa1403340 | 0.827073 | 1.913565e-54 | -8.615850e-47 |
| Msa0534730 | Msa1403890 | 0.809441 | 1.889130e-50 | -8.615850e-47 |
| Msa0534730 | Msa1424450 | 0.827295 | 1.692672e-54 | -8.615850e-47 |
| Msa0534730 | Msa1435400 | 0.804008 | 2.654687e-49 | -8.615850e-47 |
| Msa0534730 | Msa1440940 | 0.815972 | 7.028744e-52 | -8.615850e-47 |
| Msa0534730 | Msa1443610 | 0.807519 | 4.859683e-50 | -8.615850e-47 |
| Msa0534730 | Msa1444250 | -0.802676 | 5.011474e-49 | -8.615850e-47 |
| Msa0534730 | Msa1457430 | 0.805383 | 1.370984e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0534730 | MtrunA17_Chr4g0008591 | 95.617 | 616 | 12 | 5 | 1 | 616 | 1 | 601 | 0.0 | 1200 |
| Msa0534730 | MtrunA17_Chr7g0240371 | 57.677 | 508 | 155 | 16 | 117 | 616 | 61 | 516 | 3.66e-171 | 497 |
| Msa0534730 | MtrunA17_Chr4g0028701 | 47.205 | 322 | 106 | 6 | 203 | 460 | 238 | 559 | 1.31e-79 | 265 |
| Msa0534730 | MtrunA17_Chr2g0327021 | 47.482 | 278 | 119 | 2 | 196 | 446 | 234 | 511 | 9.84e-76 | 253 |
| Msa0534730 | MtrunA17_Chr5g0403251 | 44.817 | 328 | 147 | 8 | 167 | 467 | 297 | 617 | 1.13e-71 | 245 |
| Msa0534730 | MtrunA17_Chr8g0373801 | 47.078 | 308 | 135 | 5 | 181 | 462 | 359 | 664 | 2.75e-71 | 246 |
| Msa0534730 | MtrunA17_Chr1g0177751 | 43.464 | 306 | 135 | 5 | 209 | 486 | 160 | 455 | 2.23e-63 | 221 |
| Msa0534730 | MtrunA17_Chr7g0267481 | 41.270 | 315 | 133 | 6 | 214 | 491 | 175 | 474 | 1.14e-62 | 219 |
| Msa0534730 | MtrunA17_Chr8g0387321 | 46.183 | 262 | 93 | 6 | 210 | 437 | 185 | 432 | 4.20e-61 | 214 |
| Msa0534730 | MtrunA17_Chr4g0025521 | 44.565 | 276 | 128 | 5 | 210 | 462 | 217 | 490 | 1.13e-60 | 214 |
| Msa0534730 | MtrunA17_Chr3g0141931 | 41.328 | 271 | 128 | 5 | 207 | 452 | 162 | 426 | 2.25e-60 | 207 |
| Msa0534730 | MtrunA17_Chr1g0155681 | 43.561 | 264 | 107 | 4 | 213 | 444 | 173 | 426 | 6.21e-60 | 211 |
| Msa0534730 | MtrunA17_Chr3g0141941 | 41.985 | 262 | 125 | 3 | 206 | 444 | 158 | 415 | 3.57e-58 | 203 |
| Msa0534730 | MtrunA17_Chr1g0151681 | 38.071 | 197 | 118 | 4 | 269 | 464 | 322 | 515 | 1.19e-36 | 144 |
| Msa0534730 | MtrunA17_Chr5g0413201 | 54.902 | 51 | 23 | 0 | 385 | 435 | 246 | 296 | 5.77e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0534730 | AT5G02030.1 | 45.962 | 520 | 191 | 15 | 140 | 616 | 103 | 575 | 1.44e-112 | 349 |
| Msa0534730 | AT2G27990.1 | 45.455 | 308 | 142 | 5 | 148 | 446 | 206 | 496 | 7.56e-73 | 245 |
| Msa0534730 | AT4G36870.2 | 50.000 | 256 | 102 | 5 | 210 | 441 | 312 | 565 | 1.08e-65 | 229 |
| Msa0534730 | AT4G36870.1 | 50.000 | 256 | 102 | 5 | 210 | 441 | 312 | 565 | 1.08e-65 | 229 |
| Msa0534730 | AT1G19700.1 | 45.956 | 272 | 103 | 7 | 206 | 444 | 161 | 421 | 1.41e-63 | 219 |
| Msa0534730 | AT1G19700.3 | 45.956 | 272 | 103 | 7 | 206 | 444 | 161 | 421 | 1.41e-63 | 219 |
| Msa0534730 | AT1G19700.5 | 45.956 | 272 | 103 | 7 | 206 | 444 | 161 | 421 | 1.41e-63 | 219 |
| Msa0534730 | AT1G19700.4 | 45.956 | 272 | 103 | 7 | 206 | 444 | 161 | 421 | 1.41e-63 | 219 |
| Msa0534730 | AT1G19700.2 | 45.956 | 272 | 103 | 7 | 206 | 444 | 161 | 421 | 1.41e-63 | 219 |
| Msa0534730 | AT1G75410.1 | 44.828 | 261 | 117 | 5 | 205 | 444 | 162 | 416 | 1.44e-63 | 219 |
| Msa0534730 | AT1G75410.2 | 44.828 | 261 | 117 | 5 | 205 | 444 | 162 | 416 | 1.44e-63 | 219 |
| Msa0534730 | AT2G16400.1 | 35.765 | 425 | 211 | 14 | 204 | 616 | 108 | 482 | 2.21e-63 | 217 |
| Msa0534730 | AT2G23760.2 | 48.649 | 259 | 102 | 6 | 210 | 441 | 237 | 491 | 3.77e-63 | 220 |
| Msa0534730 | AT2G23760.1 | 48.649 | 259 | 102 | 6 | 210 | 441 | 237 | 491 | 3.77e-63 | 220 |
| Msa0534730 | AT2G23760.3 | 48.649 | 259 | 102 | 6 | 210 | 441 | 237 | 491 | 3.77e-63 | 220 |
| Msa0534730 | AT4G34610.2 | 37.762 | 429 | 209 | 16 | 210 | 616 | 140 | 532 | 6.65e-62 | 214 |
| Msa0534730 | AT4G34610.4 | 37.762 | 429 | 209 | 16 | 210 | 616 | 140 | 532 | 6.65e-62 | 214 |
| Msa0534730 | AT4G34610.3 | 37.762 | 429 | 209 | 16 | 210 | 616 | 140 | 532 | 6.65e-62 | 214 |
| Msa0534730 | AT4G34610.1 | 37.762 | 429 | 209 | 16 | 210 | 616 | 140 | 532 | 6.65e-62 | 214 |
| Msa0534730 | AT2G35940.3 | 40.854 | 328 | 138 | 8 | 195 | 474 | 175 | 494 | 9.09e-58 | 206 |
| Msa0534730 | AT2G35940.1 | 40.854 | 328 | 138 | 8 | 195 | 474 | 175 | 494 | 9.09e-58 | 206 |
| Msa0534730 | AT2G35940.2 | 40.854 | 328 | 138 | 8 | 195 | 474 | 175 | 494 | 9.09e-58 | 206 |
| Msa0534730 | AT2G27220.1 | 37.190 | 363 | 159 | 12 | 216 | 557 | 82 | 396 | 2.25e-56 | 197 |
| Msa0534730 | AT2G27220.3 | 37.190 | 363 | 159 | 12 | 216 | 557 | 82 | 396 | 2.25e-56 | 197 |
| Msa0534730 | AT5G41410.1 | 35.320 | 453 | 204 | 19 | 214 | 615 | 197 | 611 | 4.37e-55 | 197 |
| Msa0534730 | AT2G23760.4 | 40.193 | 311 | 103 | 7 | 210 | 441 | 237 | 543 | 1.50e-53 | 194 |
| Msa0534730 | AT2G27220.2 | 35.433 | 381 | 159 | 13 | 216 | 557 | 82 | 414 | 9.19e-53 | 187 |
| Msa0534730 | AT4G36870.4 | 46.835 | 237 | 100 | 5 | 210 | 422 | 312 | 546 | 1.38e-51 | 187 |
| Msa0534730 | AT4G36870.3 | 46.383 | 235 | 100 | 5 | 210 | 420 | 312 | 544 | 2.85e-50 | 183 |
| Msa0534730 | AT1G75410.3 | 42.017 | 238 | 111 | 5 | 205 | 421 | 162 | 393 | 2.72e-49 | 177 |
| Msa0534730 | AT1G75430.1 | 37.545 | 277 | 137 | 9 | 211 | 458 | 17 | 286 | 5.11e-48 | 170 |
| Msa0534730 | AT2G27990.2 | 37.891 | 256 | 145 | 4 | 148 | 400 | 206 | 450 | 3.38e-42 | 158 |
| Msa0534730 | AT4G32980.1 | 37.853 | 177 | 95 | 3 | 269 | 441 | 274 | 439 | 1.36e-33 | 134 |
| Msa0534730 | AT4G32980.2 | 37.853 | 177 | 95 | 3 | 269 | 441 | 274 | 439 | 1.36e-33 | 134 |
| Msa0534730 | AT1G75430.2 | 31.507 | 219 | 114 | 9 | 211 | 400 | 17 | 228 | 4.53e-22 | 97.4 |
| Msa0534730 | AT1G23380.2 | 52.727 | 55 | 26 | 0 | 381 | 435 | 255 | 309 | 2.64e-11 | 65.9 |
| Msa0534730 | AT1G23380.1 | 52.727 | 55 | 26 | 0 | 381 | 435 | 253 | 307 | 2.69e-11 | 65.9 |
| Msa0534730 | AT1G70510.1 | 52.727 | 55 | 26 | 0 | 381 | 435 | 237 | 291 | 9.68e-11 | 63.9 |
Find 125 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATAATTACCTTCATTAT+TGG | 0.154139 | 4_1:-10280611 | None:intergenic |
| CAAGAGAAGATCAAGGAAAA+AGG | 0.221518 | 4_1:+10275706 | Msa0534730:CDS |
| GAATCACAAAATAGGCATTT+TGG | 0.235036 | 4_1:+10280646 | Msa0534730:CDS |
| AGTTCAGATTGTTGTTTCTT+TGG | 0.238431 | 4_1:-10275184 | None:intergenic |
| ACATCATTTGAGTATGTTTC+CGG | 0.258945 | 4_1:+10279193 | Msa0534730:CDS |
| ACAGAAGCATATCCAGTAAA+TGG | 0.287637 | 4_1:-10276080 | None:intergenic |
| AGATATGGATCTATGATTTA+TGG | 0.297472 | 4_1:+10275993 | Msa0534730:CDS |
| AAAGAAGGTATAATAATTAA+TGG | 0.298565 | 4_1:-10275320 | None:intergenic |
| TTGGTTGAAGGAGGAGGAGG+AGG | 0.308929 | 4_1:+10276038 | Msa0534730:CDS |
| CTTCATCAAAATCATGGAAT+TGG | 0.309506 | 4_1:+10280532 | Msa0534730:CDS |
| CTTCAAGCATCTAAAATGTT+TGG | 0.311343 | 4_1:-10279263 | None:intergenic |
| CTTTCACTATTGCCAAATCT+TGG | 0.311544 | 4_1:-10279358 | None:intergenic |
| TTTGATGATGGAATCTCCTT+TGG | 0.312465 | 4_1:+10276214 | Msa0534730:CDS |
| TTCTTCTTACTAGTTTCTAT+TGG | 0.325519 | 4_1:-10280811 | None:intergenic |
| TGCAGCTCCTTATGCAAGTT+TGG | 0.333083 | 4_1:+10279225 | Msa0534730:CDS |
| CCAACTACAGTTCAATAATA+AGG | 0.348229 | 4_1:+10279300 | Msa0534730:CDS |
| AATCGTTGAGCTGCACTTAG+AGG | 0.350236 | 4_1:-10280571 | None:intergenic |
| TTATTCAAAGTCTCAAAATA+AGG | 0.356326 | 4_1:-10275783 | None:intergenic |
| GATGAAAGTGTAGACATAGT+AGG | 0.360339 | 4_1:-10275126 | None:intergenic |
| TCATAGATCCATATCTTTGT+AGG | 0.361094 | 4_1:-10275986 | None:intergenic |
| TACCTTCATTATTGGTTTCA+AGG | 0.361603 | 4_1:-10280603 | None:intergenic |
| TGCTGATTCTTCTTTGATGA+TGG | 0.364670 | 4_1:+10276202 | Msa0534730:CDS |
| TTGTGTATCAGGTATCAAAT+TGG | 0.369226 | 4_1:+10280113 | Msa0534730:intron |
| ATCTTGGAGATTCTTCCTTC+CGG | 0.371264 | 4_1:-10279342 | None:intergenic |
| CTAAGTGCAGCTCAACGATT+TGG | 0.381700 | 4_1:+10280574 | Msa0534730:CDS |
| GGTGGTGGAGGTGTGATTCA+AGG | 0.382359 | 4_1:+10276014 | Msa0534730:CDS |
| TATAGTGACCGGATAGTTAC+CGG | 0.382738 | 4_1:-10275098 | None:intergenic |
| GTTGGTAGTGGAAGCAATAA+TGG | 0.383790 | 4_1:+10280460 | Msa0534730:CDS |
| AATTATGCTTCAAACCTTGT+TGG | 0.386490 | 4_1:-10275623 | None:intergenic |
| TGACTCCTAACTGGTATGTT+AGG | 0.388310 | 4_1:-10280364 | None:intergenic |
| AAGGAAGAATCTCCAAGATT+TGG | 0.395392 | 4_1:+10279346 | Msa0534730:CDS |
| GAGTTGAACCTACAAAGATA+TGG | 0.397583 | 4_1:+10275978 | Msa0534730:CDS |
| TAAATGCAAGAGTAAGGCTT+TGG | 0.402125 | 4_1:+10280140 | Msa0534730:CDS |
| GTTGGAAATCTTGGTGTTTG+TGG | 0.405935 | 4_1:+10276161 | Msa0534730:CDS |
| TGAGCTGCACTTAGAGGAAA+TGG | 0.414973 | 4_1:-10280565 | None:intergenic |
| TATCTCTTCTACTTTGTTGT+GGG | 0.415721 | 4_1:-10275509 | None:intergenic |
| TTCTACTTTGTTGTGGGACA+TGG | 0.419439 | 4_1:-10275503 | None:intergenic |
| CAAGGGTTGGTTGAAGGAGG+AGG | 0.420449 | 4_1:+10276032 | Msa0534730:CDS |
| TGGAGGTGTGATTCAAGGGT+TGG | 0.429011 | 4_1:+10276019 | Msa0534730:CDS |
| CCTTATTATTGAACTGTAGT+TGG | 0.431582 | 4_1:-10279300 | None:intergenic |
| GGTTCATAAATGCAAGAGTA+AGG | 0.433955 | 4_1:+10280134 | Msa0534730:CDS |
| TTCTTCTTCTAACTCTATGA+AGG | 0.434092 | 4_1:+10275650 | Msa0534730:CDS |
| TGTTAGTAGTAATTTACCTT+TGG | 0.434906 | 4_1:+10275956 | Msa0534730:CDS |
| GGGTTGGTTGAAGGAGGAGG+AGG | 0.435240 | 4_1:+10276035 | Msa0534730:CDS |
| TATGTTAGGAATTTCATTTA+CGG | 0.435500 | 4_1:-10280350 | None:intergenic |
| TTTGTGCTTGATAAAGAAAA+GGG | 0.439408 | 4_1:-10275830 | None:intergenic |
| TGTTGTCCTTGACTCCTAAC+TGG | 0.446716 | 4_1:-10280373 | None:intergenic |
| TTTATCGCCAAACTTGCATA+AGG | 0.446881 | 4_1:-10279232 | None:intergenic |
| TCTTCCAACAATTCTTGAGC+TGG | 0.447343 | 4_1:-10276128 | None:intergenic |
| GGCTATAACCGGTAACTATC+CGG | 0.448169 | 4_1:+10275090 | Msa0534730:five_prime_UTR |
| AACAAAATGAAGAAAATTGT+CGG | 0.448717 | 4_1:+10280221 | Msa0534730:CDS |
| GCAGCTCAACGATTTGGTCT+TGG | 0.449764 | 4_1:+10280580 | Msa0534730:CDS |
| GTGGTGGAGGTGTGATTCAA+GGG | 0.451179 | 4_1:+10276015 | Msa0534730:CDS |
| AAGATATCACTGGCTATAAC+CGG | 0.452472 | 4_1:+10275079 | Msa0534730:five_prime_UTR |
| TTATCTCTTCTACTTTGTTG+TGG | 0.452626 | 4_1:-10275510 | None:intergenic |
| GAAACCAGCTCAAGAATTGT+TGG | 0.460161 | 4_1:+10276124 | Msa0534730:CDS |
| CCTCTTTGAGGTCGCCATAC+AGG | 0.463860 | 4_1:-10279427 | None:intergenic |
| ATGAAAGTGTAGACATAGTA+GGG | 0.464042 | 4_1:-10275125 | None:intergenic |
| AACCGGTCTGTCGCGTAGCC+AGG | 0.471295 | 4_1:+10279990 | Msa0534730:CDS |
| CGCTCGGGGAGTCCTCTTTG+AGG | 0.471673 | 4_1:-10279439 | None:intergenic |
| ATGTGTGATGTTGGAAATCT+TGG | 0.472538 | 4_1:+10276152 | Msa0534730:CDS |
| GTGATTCAAGGGTTGGTTGA+AGG | 0.473616 | 4_1:+10276026 | Msa0534730:CDS |
| TTGAGTGAAGAAGATCCATT+TGG | 0.474029 | 4_1:+10276242 | Msa0534730:CDS |
| CCAACACCTACATGTTGAAA+AGG | 0.482247 | 4_1:-10280427 | None:intergenic |
| CTAGGACTTCATCAAAATCA+TGG | 0.485498 | 4_1:+10280526 | Msa0534730:CDS |
| CAAATGTTTCATGACTTTGT+AGG | 0.488512 | 4_1:+10280688 | Msa0534730:CDS |
| ATGTGAATTTCTTCTACCAT+TGG | 0.489252 | 4_1:-10280166 | None:intergenic |
| TCTTGGTGTTTGTGGTGAAA+AGG | 0.489743 | 4_1:+10276169 | Msa0534730:CDS |
| AAAGAAGAAGAATCATAGAA+AGG | 0.493187 | 4_1:-10275582 | None:intergenic |
| TAACCAGACCTATGGCTGTA+AGG | 0.496120 | 4_1:-10279388 | None:intergenic |
| AGAACAGTCACAGCACGCTC+GGG | 0.499463 | 4_1:-10279454 | None:intergenic |
| CTGTGACTGTTCTTAGAGCT+TGG | 0.502191 | 4_1:+10279464 | Msa0534730:CDS |
| TTGGAAGAGATGTGTGATGT+TGG | 0.509914 | 4_1:+10276143 | Msa0534730:CDS |
| ATTCAAGGGTTGGTTGAAGG+AGG | 0.514542 | 4_1:+10276029 | Msa0534730:CDS |
| AAATTCCTAACATACCAGTT+AGG | 0.514657 | 4_1:+10280359 | Msa0534730:CDS |
| GAATCATAGAAAGGAAGTAA+AGG | 0.518144 | 4_1:-10275573 | None:intergenic |
| GGCCTTGAAACCAATAATGA+AGG | 0.519264 | 4_1:+10280601 | Msa0534730:CDS |
| ATAATGTTGGCTAAACAAAC+CGG | 0.528557 | 4_1:+10279973 | Msa0534730:CDS |
| TTATTGCGACCATCACCAAA+TGG | 0.532053 | 4_1:-10276257 | None:intergenic |
| GGAATGAACATTGTTGGTAG+TGG | 0.533845 | 4_1:+10280448 | Msa0534730:CDS |
| ATTTACGGCACGCTTGTAAG+TGG | 0.534606 | 4_1:-10280335 | None:intergenic |
| GGACCTTACAGCCATAGGTC+TGG | 0.535032 | 4_1:+10279385 | Msa0534730:CDS |
| TTGAGCAGCAGCAACCTGTA+TGG | 0.537184 | 4_1:+10279413 | Msa0534730:CDS |
| GGTGTTGGAATGAACATTGT+TGG | 0.538133 | 4_1:+10280442 | Msa0534730:CDS |
| TGATACAGATAAAATAATGT+TGG | 0.538302 | 4_1:+10279960 | Msa0534730:CDS |
| AACAGGTTTACAAGAGGTAC+AGG | 0.540272 | 4_1:+10279140 | Msa0534730:intron |
| GAGGAGGACCTTACAGCCAT+AGG | 0.540514 | 4_1:+10279380 | Msa0534730:CDS |
| AACAAAGTGTGAACTATGAA+AGG | 0.544169 | 4_1:-10275148 | None:intergenic |
| TCTTCACTCAATCTTTCCAA+AGG | 0.544697 | 4_1:-10276230 | None:intergenic |
| AGATTTGGCAATAGTGAAAG+AGG | 0.547255 | 4_1:+10279361 | Msa0534730:CDS |
| AGATAAGCTTAGAGTTATTG+TGG | 0.550212 | 4_1:+10275527 | Msa0534730:CDS |
| ATGAAGCTGGATTGAAGTGA+TGG | 0.550762 | 4_1:-10275358 | None:intergenic |
| CTTTGTAGGTTCAACTCCAA+AGG | 0.551629 | 4_1:-10275972 | None:intergenic |
| AAGAACAGTCACAGCACGCT+CGG | 0.552428 | 4_1:-10279455 | None:intergenic |
| AACATACCAGTTAGGAGTCA+AGG | 0.556741 | 4_1:+10280367 | Msa0534730:CDS |
| ATAAAAGCACAAGAGAAACT+TGG | 0.557474 | 4_1:-10280785 | None:intergenic |
| GCTCAAGATAACCAGACCTA+TGG | 0.561964 | 4_1:-10279396 | None:intergenic |
| GAAGGTAATTATGTTATGAG+TGG | 0.565516 | 4_1:+10280619 | Msa0534730:CDS |
| ACTTTGAATAATAACAATCA+AGG | 0.567232 | 4_1:+10275795 | Msa0534730:CDS |
| AGGAGCTGCATTGTTGAGGC+CGG | 0.568570 | 4_1:-10279212 | None:intergenic |
| TTTGGAAGAGATGTAATTGG+TGG | 0.569163 | 4_1:+10280664 | Msa0534730:CDS |
| AAAGGAAGTAAAGGTTCATG+AGG | 0.570588 | 4_1:-10275564 | None:intergenic |
| ATTGTTGTTTCTTTGGAACA+AGG | 0.573851 | 4_1:-10275177 | None:intergenic |
| TCTATGATTTATGGTGGTGG+AGG | 0.573959 | 4_1:+10276002 | Msa0534730:CDS |
| CACAGAAACAAAGATATCAC+TGG | 0.574567 | 4_1:+10275069 | Msa0534730:five_prime_UTR |
| TTGGAAGAGATGTAATTGGT+GGG | 0.574617 | 4_1:+10280665 | Msa0534730:CDS |
| AGTAGGGTTTCTATAGTGAC+CGG | 0.574764 | 4_1:-10275109 | None:intergenic |
| ATACTACCAACAGATGCAAT+CGG | 0.575247 | 4_1:+10279165 | Msa0534730:CDS |
| CATAAGGAGCTGCATTGTTG+AGG | 0.575307 | 4_1:-10279216 | None:intergenic |
| GGATCTATGATTTATGGTGG+TGG | 0.583114 | 4_1:+10275999 | Msa0534730:CDS |
| GAAACTAGAGAAGTATCTGA+AGG | 0.584578 | 4_1:-10280274 | None:intergenic |
| TACCTGGCTACGCGACAGAC+CGG | 0.586673 | 4_1:-10279992 | None:intergenic |
| AACTTATCTGTCGATGTAGA+CGG | 0.592212 | 4_1:-10280304 | None:intergenic |
| AGTAAGGCTTTGGAAACCAA+TGG | 0.597523 | 4_1:+10280150 | Msa0534730:CDS |
| GAAGAAGATCCATTTGGTGA+TGG | 0.601601 | 4_1:+10276248 | Msa0534730:CDS |
| GATGAAAGTGACAAAGACAA+AGG | 0.614377 | 4_1:-10275924 | None:intergenic |
| TTACGACCGATTGCATCTGT+TGG | 0.619652 | 4_1:-10279171 | None:intergenic |
| AGTAATGTGTCATTGACACT+AGG | 0.633869 | 4_1:+10280508 | Msa0534730:CDS |
| GAACAGTCACAGCACGCTCG+GGG | 0.634057 | 4_1:-10279453 | None:intergenic |
| TTACACAACAGGTTTACAAG+AGG | 0.637111 | 4_1:+10279134 | Msa0534730:intron |
| ATTGTTGACTATGCTTGATG+AGG | 0.645801 | 4_1:+10276286 | Msa0534730:CDS |
| CCTGTATGGCGACCTCAAAG+AGG | 0.654482 | 4_1:+10279427 | Msa0534730:CDS |
| TATGGATCTATGATTTATGG+TGG | 0.657447 | 4_1:+10275996 | Msa0534730:CDS |
| AAATTCACATGTTAGAAACA+AGG | 0.662688 | 4_1:+10280179 | Msa0534730:CDS |
| TTTGGCAATAGTGAAAGAGG+AGG | 0.703422 | 4_1:+10279364 | Msa0534730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAGTATTTTTTTTTCATT+TGG | + | chr4_1:10275399-10275418 | Msa0534730:five_prime_UTR | 10.0% |
| !!! | TTAGTATTTTTTTTTCATTT+GGG | + | chr4_1:10275400-10275419 | Msa0534730:five_prime_UTR | 10.0% |
| !!! | GTTTTAATATATTTTTTCTA+TGG | + | chr4_1:10275455-10275474 | Msa0534730:exon | 10.0% |
| !!! | TTTCCATTTTTAATTTTTTT+TGG | + | chr4_1:10276536-10276555 | Msa0534730:intron | 10.0% |
| !!! | TATATTTTTAGATGATAATA+AGG | + | chr4_1:10277143-10277162 | Msa0534730:intron | 10.0% |
| !! | TAAAATTTCACTTATAATTA+GGG | - | chr4_1:10277292-10277311 | None:intergenic | 10.0% |
| !! | TTAAAATTTCACTTATAATT+AGG | - | chr4_1:10277293-10277312 | None:intergenic | 10.0% |
| !!! | AAAGAAGGTATAATAATTAA+TGG | - | chr4_1:10275323-10275342 | None:intergenic | 15.0% |
| !! | TCTCCAAAAAAAATTAAAAA+TGG | - | chr4_1:10276542-10276561 | None:intergenic | 15.0% |
| !!! | TAAGTATTCTTTTAAAAAAG+TGG | + | chr4_1:10276677-10276696 | Msa0534730:intron | 15.0% |
| !! | TGTCTTAATTTCTAATTAAT+AGG | + | chr4_1:10276808-10276827 | Msa0534730:intron | 15.0% |
| !! | TTTCTAATTAATAGGTTAAT+AGG | + | chr4_1:10276816-10276835 | Msa0534730:intron | 15.0% |
| !! | TTAAAGTTATACTATATTGA+AGG | + | chr4_1:10277043-10277062 | Msa0534730:intron | 15.0% |
| !! | AGAAAAATAAATAACTTCAT+TGG | + | chr4_1:10277362-10277381 | Msa0534730:intron | 15.0% |
| !!! | TAAGAAAAAATCTATGTTTT+AGG | + | chr4_1:10277676-10277695 | Msa0534730:intron | 15.0% |
| !!! | ATAATTAGATTCTGAAATAT+GGG | - | chr4_1:10278285-10278304 | None:intergenic | 15.0% |
| !!! | AATAATTAGATTCTGAAATA+TGG | - | chr4_1:10278286-10278305 | None:intergenic | 15.0% |
| !! | TAAGCTAACTATTAATAATA+TGG | + | chr4_1:10278533-10278552 | Msa0534730:intron | 15.0% |
| !!! | AGATTTTATAGATTTATGTT+GGG | - | chr4_1:10278846-10278865 | None:intergenic | 15.0% |
| !!! | TAGATTTTATAGATTTATGT+TGG | - | chr4_1:10278847-10278866 | None:intergenic | 15.0% |
| !!! | TTGTAATTTTAATACATTCA+GGG | - | chr4_1:10279692-10279711 | None:intergenic | 15.0% |
| !!! | TTTGTAATTTTAATACATTC+AGG | - | chr4_1:10279693-10279712 | None:intergenic | 15.0% |
| !! | ACCAACAAAAATATAATTAA+GGG | - | chr4_1:10279721-10279740 | None:intergenic | 15.0% |
| !! | TACCAACAAAAATATAATTA+AGG | - | chr4_1:10279722-10279741 | None:intergenic | 15.0% |
| !! | TTATTCAAAGTCTCAAAATA+AGG | - | chr4_1:10275786-10275805 | None:intergenic | 20.0% |
| !! | ACTTTGAATAATAACAATCA+AGG | + | chr4_1:10275795-10275814 | Msa0534730:CDS | 20.0% |
| !!! | ATTATTTTTGTCATTTTGTG+TGG | + | chr4_1:10276458-10276477 | Msa0534730:intron | 20.0% |
| !! | TATTCTAAATACTCTCAATT+TGG | + | chr4_1:10276590-10276609 | Msa0534730:intron | 20.0% |
| !! | ATTCTAAATACTCTCAATTT+GGG | + | chr4_1:10276591-10276610 | Msa0534730:intron | 20.0% |
| !!! | TATTCTTTTAAAAAAGTGGA+AGG | + | chr4_1:10276681-10276700 | Msa0534730:intron | 20.0% |
| !! | ATCTTAATTTATGTGCATTA+AGG | + | chr4_1:10276782-10276801 | Msa0534730:intron | 20.0% |
| !!! | GCTTTTTAAGAAAAGTTAAT+GGG | + | chr4_1:10276922-10276941 | Msa0534730:intron | 20.0% |
| !! | TTAAAAAAGAAATCTATGGT+TGG | - | chr4_1:10276988-10277007 | None:intergenic | 20.0% |
| !! | TCACTTAAAAAAGAAATCTA+TGG | - | chr4_1:10276992-10277011 | None:intergenic | 20.0% |
| !!! | TTTATAGACCAATTTGTTAA+TGG | + | chr4_1:10277505-10277524 | Msa0534730:intron | 20.0% |
| !! | TATTTAGACCATTAACAAAT+TGG | - | chr4_1:10277516-10277535 | None:intergenic | 20.0% |
| !! | TTCTTATAATTATGACTAGA+GGG | - | chr4_1:10277662-10277681 | None:intergenic | 20.0% |
| !! | TTTCTTATAATTATGACTAG+AGG | - | chr4_1:10277663-10277682 | None:intergenic | 20.0% |
| !! | CAATACTCTTTCTTATATTT+GGG | + | chr4_1:10277813-10277832 | Msa0534730:intron | 20.0% |
| !! | AAAAATAAAATAGAACCTAG+TGG | + | chr4_1:10277893-10277912 | Msa0534730:intron | 20.0% |
| !! | GTTTATCTAGAAAAAGAAAT+GGG | + | chr4_1:10278051-10278070 | Msa0534730:intron | 20.0% |
| !! | AATAAACTATCAAAATGCTT+AGG | + | chr4_1:10278158-10278177 | Msa0534730:intron | 20.0% |
| !! | ATAAACTATCAAAATGCTTA+GGG | + | chr4_1:10278159-10278178 | Msa0534730:intron | 20.0% |
| !!! | AAAGTATTAAAATAAGCAAG+TGG | + | chr4_1:10278589-10278608 | Msa0534730:intron | 20.0% |
| !! | TTGAAGTGGTTATATAATTA+GGG | - | chr4_1:10278716-10278735 | None:intergenic | 20.0% |
| !!! | AAGAATTTTGTCCAAAATTA+TGG | + | chr4_1:10278753-10278772 | Msa0534730:intron | 20.0% |
| !!! | TCCCTTAATTATATTTTTGT+TGG | + | chr4_1:10279717-10279736 | Msa0534730:intron | 20.0% |
| !! | TACTAAATTGACTAACAAAA+TGG | + | chr4_1:10279750-10279769 | Msa0534730:intron | 20.0% |
| !! | TTTGAATATCAAAGTCATTA+AGG | + | chr4_1:10279808-10279827 | Msa0534730:intron | 20.0% |
| !!! | ATTATTTTATCTGTATCAGT+AGG | - | chr4_1:10279958-10279977 | None:intergenic | 20.0% |
| !! | TGATACAGATAAAATAATGT+TGG | + | chr4_1:10279960-10279979 | Msa0534730:CDS | 20.0% |
| !! | ATAGATATTGTTATATTGGT+AGG | - | chr4_1:10280092-10280111 | None:intergenic | 20.0% |
| !! | CAAGATAGATATTGTTATAT+TGG | - | chr4_1:10280096-10280115 | None:intergenic | 20.0% |
| !! | AACAAAATGAAGAAAATTGT+CGG | + | chr4_1:10280221-10280240 | Msa0534730:CDS | 20.0% |
| !! | TATGTTAGGAATTTCATTTA+CGG | - | chr4_1:10280353-10280372 | None:intergenic | 20.0% |
| !! | AACATAATTACCTTCATTAT+TGG | - | chr4_1:10280614-10280633 | None:intergenic | 20.0% |
| !!! | GTATGTACTTTTATTTTGAT+TGG | + | chr4_1:10280742-10280761 | Msa0534730:three_prime_UTR | 20.0% |
| ! | AAGTGACAAAAAAAGAAAGA+AGG | - | chr4_1:10275338-10275357 | None:intergenic | 25.0% |
| !! | AAACTTTTTATAGATGAAGC+TGG | - | chr4_1:10275374-10275393 | None:intergenic | 25.0% |
| ! | AAAGAAGAAGAATCATAGAA+AGG | - | chr4_1:10275585-10275604 | None:intergenic | 25.0% |
| !! | ACTAATTTTACTAACCAACA+AGG | + | chr4_1:10275609-10275628 | Msa0534730:CDS | 25.0% |
| ! | TTTGTGCTTGATAAAGAAAA+GGG | - | chr4_1:10275833-10275852 | None:intergenic | 25.0% |
| !! | TTTTGTGCTTGATAAAGAAA+AGG | - | chr4_1:10275834-10275853 | None:intergenic | 25.0% |
| ! | TGTTAGTAGTAATTTACCTT+TGG | + | chr4_1:10275956-10275975 | Msa0534730:CDS | 25.0% |
| ! | AGATATGGATCTATGATTTA+TGG | + | chr4_1:10275993-10276012 | Msa0534730:CDS | 25.0% |
| !!! | CTGTTTTTTTCTTCTTTTGT+CGG | + | chr4_1:10276407-10276426 | Msa0534730:intron | 25.0% |
| !!! | AGGTTAATAGGTTAGTTTTA+TGG | + | chr4_1:10276828-10276847 | Msa0534730:intron | 25.0% |
| ! | ATTCTTGCATTATATTGTGA+TGG | + | chr4_1:10276877-10276896 | Msa0534730:intron | 25.0% |
| !!! | GGCTTTTTAAGAAAAGTTAA+TGG | + | chr4_1:10276921-10276940 | Msa0534730:intron | 25.0% |
| ! | TTTAAGAAAAGTTAATGGGA+AGG | + | chr4_1:10276926-10276945 | Msa0534730:intron | 25.0% |
| !! | GAAGTATAAATCTTTTCCAA+TGG | - | chr4_1:10277072-10277091 | None:intergenic | 25.0% |
| ! | TTAGATGATAATAAGGTGAT+TGG | + | chr4_1:10277150-10277169 | Msa0534730:intron | 25.0% |
| !! | CTATTTCTCCCTTAAATTAT+TGG | + | chr4_1:10277253-10277272 | Msa0534730:intron | 25.0% |
| ! | GGTGTATACCAATAATTTAA+GGG | - | chr4_1:10277264-10277283 | None:intergenic | 25.0% |
| ! | AGGTGTATACCAATAATTTA+AGG | - | chr4_1:10277265-10277284 | None:intergenic | 25.0% |
| ! | TCCCAAAGAAAAAATTTCTT+TGG | + | chr4_1:10277632-10277651 | Msa0534730:intron | 25.0% |
| !!! | CCCAAAGAAATTTTTTCTTT+GGG | - | chr4_1:10277636-10277655 | None:intergenic | 25.0% |
| ! | CCCAAAGAAAAAATTTCTTT+GGG | + | chr4_1:10277633-10277652 | Msa0534730:intron | 25.0% |
| !!! | TCCCAAAGAAATTTTTTCTT+TGG | - | chr4_1:10277637-10277656 | None:intergenic | 25.0% |
| ! | CGTTCAATAAATAATGTATG+TGG | - | chr4_1:10277739-10277758 | None:intergenic | 25.0% |
| ! | GCAATACTCTTTCTTATATT+TGG | + | chr4_1:10277812-10277831 | Msa0534730:intron | 25.0% |
| !! | TTTCAAGCTACATTTTATCA+CGG | - | chr4_1:10278002-10278021 | None:intergenic | 25.0% |
| ! | GGTTTATCTAGAAAAAGAAA+TGG | + | chr4_1:10278050-10278069 | Msa0534730:intron | 25.0% |
| !! | TAGATTCTAATTTTCTTCTG+AGG | + | chr4_1:10278101-10278120 | Msa0534730:intron | 25.0% |
| ! | AAATATGGGTTTGAAAAGAT+AGG | - | chr4_1:10278271-10278290 | None:intergenic | 25.0% |
| !! | TAAAATGGAATTTCTGCTTT+TGG | - | chr4_1:10278406-10278425 | None:intergenic | 25.0% |
| ! | CTTGAAGTGGTTATATAATT+AGG | - | chr4_1:10278717-10278736 | None:intergenic | 25.0% |
| ! | CTAATTATATAACCACTTCA+AGG | + | chr4_1:10278715-10278734 | Msa0534730:intron | 25.0% |
| ! | TCCTTGTTCAAGAATTAAAA+TGG | + | chr4_1:10278806-10278825 | Msa0534730:intron | 25.0% |
| !!! | ACCATTTTAATTCTTGAACA+AGG | - | chr4_1:10278810-10278829 | None:intergenic | 25.0% |
| ! | GTTCTATACTTATTATCGAT+CGG | + | chr4_1:10279010-10279029 | Msa0534730:intron | 25.0% |
| !!! | TTTTAGTTCTTGAATGTGTA+CGG | + | chr4_1:10279650-10279669 | Msa0534730:intron | 25.0% |
| !!! | TTCAAAAGCTTTTACTTTTG+TGG | + | chr4_1:10279894-10279913 | Msa0534730:intron | 25.0% |
| ! | TGGTAGGATTATAAATTCAT+TGG | - | chr4_1:10280076-10280095 | None:intergenic | 25.0% |
| ! | AAATTCACATGTTAGAAACA+AGG | + | chr4_1:10280179-10280198 | Msa0534730:CDS | 25.0% |
| !!! | TCATTTTGTTGTGAATCTTT+TGG | - | chr4_1:10280211-10280230 | None:intergenic | 25.0% |
| !! | TTCTTCTTACTAGTTTCTAT+TGG | - | chr4_1:10280814-10280833 | None:intergenic | 25.0% |
| ! | ATGAAAGTGTAGACATAGTA+GGG | - | chr4_1:10275128-10275147 | None:intergenic | 30.0% |
| AACAAAGTGTGAACTATGAA+AGG | - | chr4_1:10275151-10275170 | None:intergenic | 30.0% | |
| !! | ATTGTTGTTTCTTTGGAACA+AGG | - | chr4_1:10275180-10275199 | None:intergenic | 30.0% |
| !! | AGTTCAGATTGTTGTTTCTT+TGG | - | chr4_1:10275187-10275206 | None:intergenic | 30.0% |
| ! | TATCTCTTCTACTTTGTTGT+GGG | - | chr4_1:10275512-10275531 | None:intergenic | 30.0% |
| TTATCTCTTCTACTTTGTTG+TGG | - | chr4_1:10275513-10275532 | None:intergenic | 30.0% | |
| AGATAAGCTTAGAGTTATTG+TGG | + | chr4_1:10275527-10275546 | Msa0534730:CDS | 30.0% | |
| GAATCATAGAAAGGAAGTAA+AGG | - | chr4_1:10275576-10275595 | None:intergenic | 30.0% | |
| AATTATGCTTCAAACCTTGT+TGG | - | chr4_1:10275626-10275645 | None:intergenic | 30.0% | |
| TTCTTCTTCTAACTCTATGA+AGG | + | chr4_1:10275650-10275669 | Msa0534730:CDS | 30.0% | |
| AAGAGAAGATCAAGGAAAAA+GGG | + | chr4_1:10275707-10275726 | Msa0534730:CDS | 30.0% | |
| TCATAGATCCATATCTTTGT+AGG | - | chr4_1:10275989-10276008 | None:intergenic | 30.0% | |
| TATGGATCTATGATTTATGG+TGG | + | chr4_1:10275996-10276015 | Msa0534730:CDS | 30.0% | |
| !!! | TTTTTGTCATTTTGTGTGGA+TGG | + | chr4_1:10276462-10276481 | Msa0534730:intron | 30.0% |
| !!! | TGGAAGGTTTATTTTGTTAG+TGG | + | chr4_1:10276697-10276716 | Msa0534730:intron | 30.0% |
| !!! | AGGTTTATTTTGTTAGTGGT+AGG | + | chr4_1:10276701-10276720 | Msa0534730:intron | 30.0% |
| !!! | CTAGTTTAGCTTTTGTTTCA+TGG | + | chr4_1:10276754-10276773 | Msa0534730:intron | 30.0% |
| ! | TTGCATTATATTGTGATGGA+TGG | + | chr4_1:10276881-10276900 | Msa0534730:intron | 30.0% |
| ACTATATTGAAGGAATCCAT+TGG | + | chr4_1:10277053-10277072 | Msa0534730:intron | 30.0% | |
| GTAAAGCCAATCTTACATAA+AGG | - | chr4_1:10277176-10277195 | None:intergenic | 30.0% | |
| !! | TAAGATTGGCTTTACTTGTT+TGG | + | chr4_1:10277181-10277200 | Msa0534730:intron | 30.0% |
| ! | TTTTTGCTTATAGTTGTGAC+CGG | + | chr4_1:10277774-10277793 | Msa0534730:intron | 30.0% |
| ! | TTCTTATATTTGGGACAAGA+AGG | + | chr4_1:10277822-10277841 | Msa0534730:intron | 30.0% |
| AATGAACATTGTGTATGTCA+TGG | + | chr4_1:10278020-10278039 | Msa0534730:intron | 30.0% | |
| !! | ATTCTAATTTTCTTCTGAGG+TGG | + | chr4_1:10278104-10278123 | Msa0534730:intron | 30.0% |
| ! | GTGTATGTGATCCATAATTT+TGG | - | chr4_1:10278767-10278786 | None:intergenic | 30.0% |
| TTGATTGCATAGTCATTTCT+TGG | - | chr4_1:10278909-10278928 | None:intergenic | 30.0% | |
| CATATCAATGAAACAGCAAA+AGG | - | chr4_1:10278962-10278981 | None:intergenic | 30.0% | |
| ! | CTTGTACATTTTTACACAAC+AGG | + | chr4_1:10279123-10279142 | Msa0534730:intron | 30.0% |
| ACATCATTTGAGTATGTTTC+CGG | + | chr4_1:10279193-10279212 | Msa0534730:CDS | 30.0% | |
| ! | CTTCAAGCATCTAAAATGTT+TGG | - | chr4_1:10279266-10279285 | None:intergenic | 30.0% |
| ! | ACATTTTAGATGCTTGAAGA+AGG | + | chr4_1:10279267-10279286 | Msa0534730:CDS | 30.0% |
| CCTTATTATTGAACTGTAGT+TGG | - | chr4_1:10279303-10279322 | None:intergenic | 30.0% | |
| CCAACTACAGTTCAATAATA+AGG | + | chr4_1:10279300-10279319 | Msa0534730:CDS | 30.0% | |
| GAAACATAGAATTGCACTTA+CGG | - | chr4_1:10279511-10279530 | None:intergenic | 30.0% | |
| GGAATTTGACATACGAATAA+AGG | + | chr4_1:10279559-10279578 | Msa0534730:intron | 30.0% | |
| !!! | GATGTCTAAATTTTTGGCAA+TGG | - | chr4_1:10279601-10279620 | None:intergenic | 30.0% |
| ! | AGCACAGATGTCTAAATTTT+TGG | - | chr4_1:10279607-10279626 | None:intergenic | 30.0% |
| AAAAATTTAGACATCTGTGC+TGG | + | chr4_1:10279606-10279625 | Msa0534730:intron | 30.0% | |
| ACTAACAAAATGGATATTCG+AGG | + | chr4_1:10279760-10279779 | Msa0534730:intron | 30.0% | |
| ! | ATAATGTTGGCTAAACAAAC+CGG | + | chr4_1:10279973-10279992 | Msa0534730:CDS | 30.0% |
| CAATATCTATCTTGTGTATC+AGG | + | chr4_1:10280102-10280121 | Msa0534730:intron | 30.0% | |
| TTGTGTATCAGGTATCAAAT+TGG | + | chr4_1:10280113-10280132 | Msa0534730:intron | 30.0% | |
| ATGTGAATTTCTTCTACCAT+TGG | - | chr4_1:10280169-10280188 | None:intergenic | 30.0% | |
| AAATTCCTAACATACCAGTT+AGG | + | chr4_1:10280359-10280378 | Msa0534730:CDS | 30.0% | |
| CTTCATCAAAATCATGGAAT+TGG | + | chr4_1:10280532-10280551 | Msa0534730:CDS | 30.0% | |
| !! | TACCTTCATTATTGGTTTCA+AGG | - | chr4_1:10280606-10280625 | None:intergenic | 30.0% |
| GAAGGTAATTATGTTATGAG+TGG | + | chr4_1:10280619-10280638 | Msa0534730:CDS | 30.0% | |
| !!! | GTGGTTTTGAATCACAAAAT+AGG | + | chr4_1:10280638-10280657 | Msa0534730:CDS | 30.0% |
| ! | GAATCACAAAATAGGCATTT+TGG | + | chr4_1:10280646-10280665 | Msa0534730:CDS | 30.0% |
| !! | CATTTTGGAAGAGATGTAAT+TGG | + | chr4_1:10280661-10280680 | Msa0534730:CDS | 30.0% |
| CAAATGTTTCATGACTTTGT+AGG | + | chr4_1:10280688-10280707 | Msa0534730:CDS | 30.0% | |
| ! | ATAAAAGCACAAGAGAAACT+TGG | - | chr4_1:10280788-10280807 | None:intergenic | 30.0% |
| CACAGAAACAAAGATATCAC+TGG | + | chr4_1:10275069-10275088 | Msa0534730:five_prime_UTR | 35.0% | |
| ! | AAGATATCACTGGCTATAAC+CGG | + | chr4_1:10275079-10275098 | Msa0534730:five_prime_UTR | 35.0% |
| ! | GATGAAAGTGTAGACATAGT+AGG | - | chr4_1:10275129-10275148 | None:intergenic | 35.0% |
| ! | TTTTTCTATGGCTAGTGATG+AGG | + | chr4_1:10275467-10275486 | Msa0534730:exon | 35.0% |
| ! | TTTTCTATGGCTAGTGATGA+GGG | + | chr4_1:10275468-10275487 | Msa0534730:exon | 35.0% |
| AAAGGAAGTAAAGGTTCATG+AGG | - | chr4_1:10275567-10275586 | None:intergenic | 35.0% | |
| !!! | CGTTTTTCAAGAGAAGATCA+AGG | + | chr4_1:10275699-10275718 | Msa0534730:CDS | 35.0% |
| CAAGAGAAGATCAAGGAAAA+AGG | + | chr4_1:10275706-10275725 | Msa0534730:CDS | 35.0% | |
| GATGAAAGTGACAAAGACAA+AGG | - | chr4_1:10275927-10275946 | None:intergenic | 35.0% | |
| GAGTTGAACCTACAAAGATA+TGG | + | chr4_1:10275978-10275997 | Msa0534730:CDS | 35.0% | |
| ! | ACAGAAGCATATCCAGTAAA+TGG | - | chr4_1:10276083-10276102 | None:intergenic | 35.0% |
| !! | TGGATATGCTTCTGTTTTGA+AGG | + | chr4_1:10276088-10276107 | Msa0534730:CDS | 35.0% |
| !!! | CTTCTGTTTTGAAGGATTCT+AGG | + | chr4_1:10276096-10276115 | Msa0534730:CDS | 35.0% |
| ATGTGTGATGTTGGAAATCT+TGG | + | chr4_1:10276152-10276171 | Msa0534730:CDS | 35.0% | |
| !! | TGCTGATTCTTCTTTGATGA+TGG | + | chr4_1:10276202-10276221 | Msa0534730:CDS | 35.0% |
| !! | TTTGATGATGGAATCTCCTT+TGG | + | chr4_1:10276214-10276233 | Msa0534730:CDS | 35.0% |
| TCTTCACTCAATCTTTCCAA+AGG | - | chr4_1:10276233-10276252 | None:intergenic | 35.0% | |
| TTGAGTGAAGAAGATCCATT+TGG | + | chr4_1:10276242-10276261 | Msa0534730:CDS | 35.0% | |
| ! | ATTGTTGACTATGCTTGATG+AGG | + | chr4_1:10276286-10276305 | Msa0534730:CDS | 35.0% |
| AGGCTAACATAAGGTTTGAT+TGG | + | chr4_1:10276721-10276740 | Msa0534730:intron | 35.0% | |
| AATGGGAAGGAATATATGCA+TGG | + | chr4_1:10276939-10276958 | Msa0534730:intron | 35.0% | |
| AGGAATATATGCATGGAGAT+TGG | + | chr4_1:10276946-10276965 | Msa0534730:intron | 35.0% | |
| ACTATGTCACCCAATTTGTA+GGG | + | chr4_1:10277011-10277030 | Msa0534730:intron | 35.0% | |
| GCAAATCATCCCTACAAATT+GGG | - | chr4_1:10277023-10277042 | None:intergenic | 35.0% | |
| AGCAAATCATCCCTACAAAT+TGG | - | chr4_1:10277024-10277043 | None:intergenic | 35.0% | |
| !! | GATTGGCCTTTATGTAAGAT+TGG | + | chr4_1:10277167-10277186 | Msa0534730:intron | 35.0% |
| TCACTTATAATTAGGGCATG+AGG | - | chr4_1:10277285-10277304 | None:intergenic | 35.0% | |
| CCAATTAAATATGCACCACT+AGG | - | chr4_1:10277911-10277930 | None:intergenic | 35.0% | |
| CCTAGTGGTGCATATTTAAT+TGG | + | chr4_1:10277908-10277927 | Msa0534730:intron | 35.0% | |
| AGTGGTGCATATTTAATTGG+TGG | + | chr4_1:10277911-10277930 | Msa0534730:intron | 35.0% | |
| TTGTAGAAATGTACTGCAGA+AGG | + | chr4_1:10278307-10278326 | Msa0534730:intron | 35.0% | |
| ATTAACACAAGTTTCACACG+AGG | - | chr4_1:10278438-10278457 | None:intergenic | 35.0% | |
| TACTTTAACCAATGCCCTAA+GGG | - | chr4_1:10278575-10278594 | None:intergenic | 35.0% | |
| ATACTTTAACCAATGCCCTA+AGG | - | chr4_1:10278576-10278595 | None:intergenic | 35.0% | |
| CATCAGTAGAAACTTTGTCT+TGG | - | chr4_1:10278653-10278672 | None:intergenic | 35.0% | |
| CAAGACAAAGTTTCTACTGA+TGG | + | chr4_1:10278651-10278670 | Msa0534730:intron | 35.0% | |
| ATTCCTTAACCAATGCTCTT+AGG | + | chr4_1:10278674-10278693 | Msa0534730:intron | 35.0% | |
| ! | AATCAATGTCCTAAGAGCAT+TGG | - | chr4_1:10278686-10278705 | None:intergenic | 35.0% |
| ATCACATACACATCATTCAC+CGG | + | chr4_1:10278776-10278795 | Msa0534730:intron | 35.0% | |
| AGAACATAGTTCATCTCAGA+GGG | - | chr4_1:10278995-10279014 | None:intergenic | 35.0% | |
| TAGAACATAGTTCATCTCAG+AGG | - | chr4_1:10278996-10279015 | None:intergenic | 35.0% | |
| TAATAGAAACCTACGAAGCA+CGG | - | chr4_1:10279051-10279070 | None:intergenic | 35.0% | |
| TATCAAACATCGTCAACTGA+AGG | - | chr4_1:10279075-10279094 | None:intergenic | 35.0% | |
| TTACACAACAGGTTTACAAG+AGG | + | chr4_1:10279134-10279153 | Msa0534730:intron | 35.0% | |
| ATACTACCAACAGATGCAAT+CGG | + | chr4_1:10279165-10279184 | Msa0534730:CDS | 35.0% | |
| TTTATCGCCAAACTTGCATA+AGG | - | chr4_1:10279235-10279254 | None:intergenic | 35.0% | |
| AAGGAAGAATCTCCAAGATT+TGG | + | chr4_1:10279346-10279365 | Msa0534730:CDS | 35.0% | |
| CTTTCACTATTGCCAAATCT+TGG | - | chr4_1:10279361-10279380 | None:intergenic | 35.0% | |
| AGATTTGGCAATAGTGAAAG+AGG | + | chr4_1:10279361-10279380 | Msa0534730:CDS | 35.0% | |
| TCGTATGTCAAATTCCATCA+AGG | - | chr4_1:10279555-10279574 | None:intergenic | 35.0% | |
| !!! | GTCTAAATTTTTGGCAATGG+AGG | - | chr4_1:10279598-10279617 | None:intergenic | 35.0% |
| AACTGCAATCGCAATAATCA+TGG | + | chr4_1:10279864-10279883 | Msa0534730:intron | 35.0% | |
| TTATCGAGATAAAGCTTACC+TGG | - | chr4_1:10280011-10280030 | None:intergenic | 35.0% | |
| GGTTCATAAATGCAAGAGTA+AGG | + | chr4_1:10280134-10280153 | Msa0534730:CDS | 35.0% | |
| TAAATGCAAGAGTAAGGCTT+TGG | + | chr4_1:10280140-10280159 | Msa0534730:CDS | 35.0% | |
| !! | GAAACTAGAGAAGTATCTGA+AGG | - | chr4_1:10280277-10280296 | None:intergenic | 35.0% |
| AACTTATCTGTCGATGTAGA+CGG | - | chr4_1:10280307-10280326 | None:intergenic | 35.0% | |
| ! | AGTCTACCTTTTCAACATGT+AGG | + | chr4_1:10280421-10280440 | Msa0534730:CDS | 35.0% |
| ! | AGTAATGTGTCATTGACACT+AGG | + | chr4_1:10280508-10280527 | Msa0534730:CDS | 35.0% |
| CTAGGACTTCATCAAAATCA+TGG | + | chr4_1:10280526-10280545 | Msa0534730:CDS | 35.0% | |
| TTTGGAAGAGATGTAATTGG+TGG | + | chr4_1:10280664-10280683 | Msa0534730:CDS | 35.0% | |
| TTGGAAGAGATGTAATTGGT+GGG | + | chr4_1:10280665-10280684 | Msa0534730:CDS | 35.0% | |
| TATAGTGACCGGATAGTTAC+CGG | - | chr4_1:10275101-10275120 | None:intergenic | 40.0% | |
| AGTAGGGTTTCTATAGTGAC+CGG | - | chr4_1:10275112-10275131 | None:intergenic | 40.0% | |
| ATGAAGCTGGATTGAAGTGA+TGG | - | chr4_1:10275361-10275380 | None:intergenic | 40.0% | |
| ! | TTCTACTTTGTTGTGGGACA+TGG | - | chr4_1:10275506-10275525 | None:intergenic | 40.0% |
| CTTTGTAGGTTCAACTCCAA+AGG | - | chr4_1:10275975-10275994 | None:intergenic | 40.0% | |
| GGATCTATGATTTATGGTGG+TGG | + | chr4_1:10275999-10276018 | Msa0534730:CDS | 40.0% | |
| !! | TCTATGATTTATGGTGGTGG+AGG | + | chr4_1:10276002-10276021 | Msa0534730:CDS | 40.0% |
| GAAACCAGCTCAAGAATTGT+TGG | + | chr4_1:10276124-10276143 | Msa0534730:CDS | 40.0% | |
| TCTTCCAACAATTCTTGAGC+TGG | - | chr4_1:10276131-10276150 | None:intergenic | 40.0% | |
| TTGGAAGAGATGTGTGATGT+TGG | + | chr4_1:10276143-10276162 | Msa0534730:CDS | 40.0% | |
| !! | GTTGGAAATCTTGGTGTTTG+TGG | + | chr4_1:10276161-10276180 | Msa0534730:CDS | 40.0% |
| !! | TCTTGGTGTTTGTGGTGAAA+AGG | + | chr4_1:10276169-10276188 | Msa0534730:CDS | 40.0% |
| ! | GAAGAAGATCCATTTGGTGA+TGG | + | chr4_1:10276248-10276267 | Msa0534730:CDS | 40.0% |
| TTATTGCGACCATCACCAAA+TGG | - | chr4_1:10276260-10276279 | None:intergenic | 40.0% | |
| GTTAGTGGTAGGCTAACATA+AGG | + | chr4_1:10276712-10276731 | Msa0534730:intron | 40.0% | |
| !! | TATATTGTGATGGATGGCCT+CGG | + | chr4_1:10276887-10276906 | Msa0534730:intron | 40.0% |
| GACTATGTCACCCAATTTGT+AGG | + | chr4_1:10277010-10277029 | Msa0534730:intron | 40.0% | |
| ATTGTGTATGTCATGGCTTG+TGG | + | chr4_1:10278027-10278046 | Msa0534730:intron | 40.0% | |
| ! | TTGTGTATGTCATGGCTTGT+GGG | + | chr4_1:10278028-10278047 | Msa0534730:intron | 40.0% |
| !!! | CACTGCATGTGCTTTTTCTT+CGG | + | chr4_1:10278239-10278258 | Msa0534730:intron | 40.0% |
| ! | ACGAGGCTTTTAGGCTAAAA+TGG | - | chr4_1:10278421-10278440 | None:intergenic | 40.0% |
| ! | AAGTTTCACACGAGGCTTTT+AGG | - | chr4_1:10278430-10278449 | None:intergenic | 40.0% |
| !! | TGTCCTAAGAGCATTGGTTA+AGG | - | chr4_1:10278680-10278699 | None:intergenic | 40.0% |
| AACAAACGTTCTCCTTGAAG+TGG | - | chr4_1:10278730-10278749 | None:intergenic | 40.0% | |
| GAACATAGTTCATCTCAGAG+GGG | - | chr4_1:10278994-10279013 | None:intergenic | 40.0% | |
| TACTTATTATCGATCGGTCC+TGG | + | chr4_1:10279016-10279035 | Msa0534730:intron | 40.0% | |
| ! | AACAGGTTTACAAGAGGTAC+AGG | + | chr4_1:10279140-10279159 | Msa0534730:intron | 40.0% |
| ! | CTCATTTTCACACAAGCAAC+CGG | + | chr4_1:10279323-10279342 | Msa0534730:CDS | 40.0% |
| ATCTTGGAGATTCTTCCTTC+CGG | - | chr4_1:10279345-10279364 | None:intergenic | 40.0% | |
| TTTGGCAATAGTGAAAGAGG+AGG | + | chr4_1:10279364-10279383 | Msa0534730:CDS | 40.0% | |
| TCGATTAAGCAATGCCTTGA+TGG | + | chr4_1:10279538-10279557 | Msa0534730:intron | 40.0% | |
| TAGTTCTTGAATGTGTACGG+CGG | + | chr4_1:10279653-10279672 | Msa0534730:intron | 40.0% | |
| TGCAATCGCAATAATCATGG+TGG | + | chr4_1:10279867-10279886 | Msa0534730:intron | 40.0% | |
| !! | AGTAAGGCTTTGGAAACCAA+TGG | + | chr4_1:10280150-10280169 | Msa0534730:CDS | 40.0% |
| TGACTCCTAACTGGTATGTT+AGG | - | chr4_1:10280367-10280386 | None:intergenic | 40.0% | |
| AACATACCAGTTAGGAGTCA+AGG | + | chr4_1:10280367-10280386 | Msa0534730:CDS | 40.0% | |
| CCAACACCTACATGTTGAAA+AGG | - | chr4_1:10280430-10280449 | None:intergenic | 40.0% | |
| ! | CCTTTTCAACATGTAGGTGT+TGG | + | chr4_1:10280427-10280446 | Msa0534730:CDS | 40.0% |
| ! | GGTGTTGGAATGAACATTGT+TGG | + | chr4_1:10280442-10280461 | Msa0534730:CDS | 40.0% |
| ! | GGAATGAACATTGTTGGTAG+TGG | + | chr4_1:10280448-10280467 | Msa0534730:CDS | 40.0% |
| !! | GTTGGTAGTGGAAGCAATAA+TGG | + | chr4_1:10280460-10280479 | Msa0534730:CDS | 40.0% |
| GGCCTTGAAACCAATAATGA+AGG | + | chr4_1:10280601-10280620 | Msa0534730:CDS | 40.0% | |
| GGCTATAACCGGTAACTATC+CGG | + | chr4_1:10275090-10275109 | Msa0534730:five_prime_UTR | 45.0% | |
| !! | GCTAGTGATGAGGGTTTTGA+AGG | + | chr4_1:10275477-10275496 | Msa0534730:CDS | 45.0% |
| !! | GTGATTCAAGGGTTGGTTGA+AGG | + | chr4_1:10276026-10276045 | Msa0534730:CDS | 45.0% |
| !! | ATTCAAGGGTTGGTTGAAGG+AGG | + | chr4_1:10276029-10276048 | Msa0534730:CDS | 45.0% |
| AAAGCCAATTGAGTTCACCG+AGG | - | chr4_1:10276907-10276926 | None:intergenic | 45.0% | |
| TTGCTTATAGTTGTGACCGG+AGG | + | chr4_1:10277777-10277796 | Msa0534730:intron | 45.0% | |
| TGCTTATAGTTGTGACCGGA+GGG | + | chr4_1:10277778-10277797 | Msa0534730:intron | 45.0% | |
| ! | TGTGTATGTCATGGCTTGTG+GGG | + | chr4_1:10278029-10278048 | Msa0534730:intron | 45.0% |
| !!! | GCATGTGCTTTTTCTTCGGT+TGG | + | chr4_1:10278243-10278262 | Msa0534730:intron | 45.0% |
| AATGCTAATGAGCGCCCTTA+GGG | + | chr4_1:10278558-10278577 | Msa0534730:intron | 45.0% | |
| TACACATCATTCACCGGTGA+AGG | + | chr4_1:10278782-10278801 | Msa0534730:intron | 45.0% | |
| ACACATCATTCACCGGTGAA+GGG | + | chr4_1:10278783-10278802 | Msa0534730:intron | 45.0% | |
| TTACGACCGATTGCATCTGT+TGG | - | chr4_1:10279174-10279193 | None:intergenic | 45.0% | |
| CATAAGGAGCTGCATTGTTG+AGG | - | chr4_1:10279219-10279238 | None:intergenic | 45.0% | |
| TGCAGCTCCTTATGCAAGTT+TGG | + | chr4_1:10279225-10279244 | Msa0534730:CDS | 45.0% | |
| ! | TTTTCACACAAGCAACCGGA+AGG | + | chr4_1:10279327-10279346 | Msa0534730:CDS | 45.0% |
| TAACCAGACCTATGGCTGTA+AGG | - | chr4_1:10279391-10279410 | None:intergenic | 45.0% | |
| GCTCAAGATAACCAGACCTA+TGG | - | chr4_1:10279399-10279418 | None:intergenic | 45.0% | |
| CTGTGACTGTTCTTAGAGCT+TGG | + | chr4_1:10279464-10279483 | Msa0534730:CDS | 45.0% | |
| AGTTCTTGAATGTGTACGGC+GGG | + | chr4_1:10279654-10279673 | Msa0534730:intron | 45.0% | |
| ATCAGTAGGATAGCTGCACA+AGG | - | chr4_1:10279944-10279963 | None:intergenic | 45.0% | |
| ATTTACGGCACGCTTGTAAG+TGG | - | chr4_1:10280338-10280357 | None:intergenic | 45.0% | |
| TGTTGTCCTTGACTCCTAAC+TGG | - | chr4_1:10280376-10280395 | None:intergenic | 45.0% | |
| TGAGCTGCACTTAGAGGAAA+TGG | - | chr4_1:10280568-10280587 | None:intergenic | 45.0% | |
| AATCGTTGAGCTGCACTTAG+AGG | - | chr4_1:10280574-10280593 | None:intergenic | 45.0% | |
| CTAAGTGCAGCTCAACGATT+TGG | + | chr4_1:10280574-10280593 | Msa0534730:CDS | 45.0% | |
| !!! | TATTTTTTTTATTCTTTAAA+TGG | + | chr4_1:10277607-10277626 | Msa0534730:intron | 5.0% |
| ! | GTGGTGGAGGTGTGATTCAA+GGG | + | chr4_1:10276015-10276034 | Msa0534730:CDS | 50.0% |
| ! | TGGAGGTGTGATTCAAGGGT+TGG | + | chr4_1:10276019-10276038 | Msa0534730:CDS | 50.0% |
| GGGGGTTCAGTTCCATTTAC+TGG | + | chr4_1:10276068-10276087 | Msa0534730:CDS | 50.0% | |
| ATGGCCTCGGTGAACTCAAT+TGG | + | chr4_1:10276900-10276919 | Msa0534730:intron | 50.0% | |
| GAATGCTAATGAGCGCCCTT+AGG | + | chr4_1:10278557-10278576 | Msa0534730:intron | 50.0% | |
| CTTGAACAAGGACCCTTCAC+CGG | - | chr4_1:10278798-10278817 | None:intergenic | 50.0% | |
| TGTTTGTGTCCGTGCTTCGT+AGG | + | chr4_1:10279039-10279058 | Msa0534730:intron | 50.0% | |
| TTGAGCAGCAGCAACCTGTA+TGG | + | chr4_1:10279413-10279432 | Msa0534730:CDS | 50.0% | |
| AAGAACAGTCACAGCACGCT+CGG | - | chr4_1:10279458-10279477 | None:intergenic | 50.0% | |
| !! | GCAGCTCAACGATTTGGTCT+TGG | + | chr4_1:10280580-10280599 | Msa0534730:CDS | 50.0% |
| !! | GGTGGTGGAGGTGTGATTCA+AGG | + | chr4_1:10276014-10276033 | Msa0534730:CDS | 55.0% |
| !! | CAAGGGTTGGTTGAAGGAGG+AGG | + | chr4_1:10276032-10276051 | Msa0534730:CDS | 55.0% |
| TTGGTTGAAGGAGGAGGAGG+AGG | + | chr4_1:10276038-10276057 | Msa0534730:CDS | 55.0% | |
| TTGCTCACGTGTACACCCTC+CGG | - | chr4_1:10277796-10277815 | None:intergenic | 55.0% | |
| AATGAGCGCCCTTAGGGCAT+TGG | + | chr4_1:10278564-10278583 | Msa0534730:intron | 55.0% | |
| GAAGCACGGACACAAACACC+AGG | - | chr4_1:10279037-10279056 | None:intergenic | 55.0% | |
| AGGAGCTGCATTGTTGAGGC+CGG | - | chr4_1:10279215-10279234 | None:intergenic | 55.0% | |
| GAGGAGGACCTTACAGCCAT+AGG | + | chr4_1:10279380-10279399 | Msa0534730:CDS | 55.0% | |
| GGACCTTACAGCCATAGGTC+TGG | + | chr4_1:10279385-10279404 | Msa0534730:CDS | 55.0% | |
| !! | CCTCTTTGAGGTCGCCATAC+AGG | - | chr4_1:10279430-10279449 | None:intergenic | 55.0% |
| CCTGTATGGCGACCTCAAAG+AGG | + | chr4_1:10279427-10279446 | Msa0534730:CDS | 55.0% | |
| AGAACAGTCACAGCACGCTC+GGG | - | chr4_1:10279457-10279476 | None:intergenic | 55.0% | |
| !! | GGGTTGGTTGAAGGAGGAGG+AGG | + | chr4_1:10276035-10276054 | Msa0534730:CDS | 60.0% |
| GTTGAAGGAGGAGGAGGAGG+AGG | + | chr4_1:10276041-10276060 | Msa0534730:CDS | 60.0% | |
| GAGGAGGAGGAGGAGGAAGT+GGG | + | chr4_1:10276048-10276067 | Msa0534730:CDS | 60.0% | |
| AGGAGGAGGAGGAGGAAGTG+GGG | + | chr4_1:10276049-10276068 | Msa0534730:CDS | 60.0% | |
| GAACAGTCACAGCACGCTCG+GGG | - | chr4_1:10279456-10279475 | None:intergenic | 60.0% | |
| ! | GTGTACGGCGGGTGTCACAA+TGG | + | chr4_1:10279665-10279684 | Msa0534730:intron | 60.0% |
| TACCTGGCTACGCGACAGAC+CGG | - | chr4_1:10279995-10280014 | None:intergenic | 60.0% | |
| GGAGGAGGAGGAGGAGGAAG+TGG | + | chr4_1:10276047-10276066 | Msa0534730:CDS | 65.0% | |
| GGAGGAGGAGGAGGAAGTGG+GGG | + | chr4_1:10276050-10276069 | Msa0534730:CDS | 65.0% | |
| CGCTCGGGGAGTCCTCTTTG+AGG | - | chr4_1:10279442-10279461 | None:intergenic | 65.0% | |
| AACCGGTCTGTCGCGTAGCC+AGG | + | chr4_1:10279990-10280009 | Msa0534730:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 10275059 | 10280850 | 10275059 | ID=Msa0534730;Name=Msa0534730 |
| chr4_1 | mRNA | 10275059 | 10280850 | 10275059 | ID=Msa0534730-mRNA-1;Parent=Msa0534730;Name=Msa0534730-mRNA-1;_AED=0.03;_eAED=0.03;_QI=415|1|1|1|1|1|4|136|616 |
| chr4_1 | exon | 10275059 | 10276307 | 10275059 | ID=Msa0534730-mRNA-1:exon:3288;Parent=Msa0534730-mRNA-1 |
| chr4_1 | exon | 10279145 | 10279509 | 10279145 | ID=Msa0534730-mRNA-1:exon:3289;Parent=Msa0534730-mRNA-1 |
| chr4_1 | exon | 10279951 | 10280011 | 10279951 | ID=Msa0534730-mRNA-1:exon:3290;Parent=Msa0534730-mRNA-1 |
| chr4_1 | exon | 10280124 | 10280850 | 10280124 | ID=Msa0534730-mRNA-1:exon:3291;Parent=Msa0534730-mRNA-1 |
| chr4_1 | five_prime_UTR | 10275059 | 10275473 | 10275059 | ID=Msa0534730-mRNA-1:five_prime_utr;Parent=Msa0534730-mRNA-1 |
| chr4_1 | CDS | 10275474 | 10276307 | 10275474 | ID=Msa0534730-mRNA-1:cds;Parent=Msa0534730-mRNA-1 |
| chr4_1 | CDS | 10279145 | 10279509 | 10279145 | ID=Msa0534730-mRNA-1:cds;Parent=Msa0534730-mRNA-1 |
| chr4_1 | CDS | 10279951 | 10280011 | 10279951 | ID=Msa0534730-mRNA-1:cds;Parent=Msa0534730-mRNA-1 |
| chr4_1 | CDS | 10280124 | 10280714 | 10280124 | ID=Msa0534730-mRNA-1:cds;Parent=Msa0534730-mRNA-1 |
| chr4_1 | three_prime_UTR | 10280715 | 10280850 | 10280715 | ID=Msa0534730-mRNA-1:three_prime_utr;Parent=Msa0534730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
