AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1048710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1048710 MtrunA17_Chr7g0217221 78.221 326 15 3 1 325 1 271 0.0 504
Msa1048710 MtrunA17_Chr6g0453211 66.258 326 81 8 1 314 1 309 3.90e-135 386
Msa1048710 MtrunA17_Chr3g0092401 53.823 327 110 9 1 315 2 299 3.29e-104 307
Msa1048710 MtrunA17_Chr4g0060721 51.057 331 136 9 1 315 2 322 5.58e-102 303
Msa1048710 MtrunA17_Chr7g0254411 43.626 353 123 8 1 307 1 323 7.54e-78 241
Msa1048710 MtrunA17_Chr6g0453471 50.732 205 87 5 1 191 1 205 1.02e-62 203
Msa1048710 MtrunA17_Chr4g0039971 71.552 116 33 0 1 116 2 117 1.26e-59 194
Msa1048710 MtrunA17_Chr7g0217741 70.339 118 35 0 1 118 1 118 1.75e-59 193
Msa1048710 MtrunA17_Chr3g0115821 69.828 116 35 0 1 116 1 116 1.82e-59 194
Msa1048710 MtrunA17_Chr2g0323411 67.227 119 39 0 1 119 1 119 2.20e-58 191
Msa1048710 MtrunA17_Chr1g0203411 64.844 128 44 1 1 128 1 127 3.99e-58 189
Msa1048710 MtrunA17_Chr4g0042671 70.339 118 35 0 1 118 1 118 3.92e-57 190
Msa1048710 MtrunA17_Chr1g0187761 63.281 128 47 0 1 128 1 128 9.07e-57 184
Msa1048710 MtrunA17_Chr7g0261281 62.903 124 46 0 1 124 1 124 6.26e-55 180
Msa1048710 MtrunA17_Chr7g0274581 59.350 123 50 0 1 123 1 123 7.64e-55 177
Msa1048710 MtrunA17_Chr8g0346561 63.333 120 44 0 1 120 1 120 9.98e-55 180
Msa1048710 MtrunA17_Chr5g0395281 65.254 118 41 0 1 118 1 118 1.81e-54 180
Msa1048710 MtrunA17_Chr1g0167661 66.379 116 39 0 1 116 1 116 2.05e-54 178
Msa1048710 MtrunA17_Chr5g0410961 65.254 118 41 0 1 118 1 118 2.74e-54 181
Msa1048710 MtrunA17_Chr2g0281071 66.387 119 39 1 1 118 1 119 2.95e-54 181
Msa1048710 MtrunA17_Chr1g0167691 66.379 116 39 0 1 116 1 116 3.22e-54 177
Msa1048710 MtrunA17_Chr7g0275911 62.500 120 45 0 1 120 1 120 5.37e-54 177
Msa1048710 MtrunA17_Chr4g0048511 64.706 119 41 1 1 118 1 119 8.47e-54 180
Msa1048710 MtrunA17_Chr4g0068061 64.655 116 41 0 1 116 1 116 5.12e-53 177
Msa1048710 MtrunA17_Chr3g0131121 65.517 116 40 0 1 116 1 116 9.29e-53 175
Msa1048710 MtrunA17_Chr8g0349261 67.797 118 36 2 1 116 1 118 1.05e-52 175
Msa1048710 MtrunA17_Chr3g0110351 67.797 118 38 0 1 118 1 118 1.31e-52 175
Msa1048710 MtrunA17_Chr5g0434571 67.797 118 38 0 1 118 37 154 2.89e-52 176
Msa1048710 MtrunA17_Chr6g0452271 63.559 118 43 0 1 118 1 118 4.04e-52 175
Msa1048710 MtrunA17_Chr4g0057031 67.797 118 38 0 1 118 1 118 5.46e-52 172
Msa1048710 MtrunA17_Chr1g0151941 64.957 117 40 1 1 116 1 117 7.45e-52 171
Msa1048710 MtrunA17_Chr4g0070611 62.602 123 46 0 1 123 1 123 7.83e-52 173
Msa1048710 MtrunA17_Chr4g0037141 62.931 116 43 0 1 116 1 116 1.18e-51 172
Msa1048710 MtrunA17_Chr4g0070641 62.602 123 46 0 1 123 1 123 1.23e-51 168
Msa1048710 MtrunA17_Chr3g0135311 67.521 117 37 1 1 116 1 117 3.20e-51 172
Msa1048710 MtrunA17_Chr3g0103281 62.069 116 44 0 1 116 1 116 4.62e-50 169
Msa1048710 MtrunA17_Chr1g0152011 64.957 117 40 1 1 116 1 117 6.28e-50 169
Msa1048710 MtrunA17_Chr5g0400821 63.636 121 43 1 1 120 1 121 1.08e-49 167
Msa1048710 MtrunA17_Chr8g0387421 62.712 118 44 0 1 118 1 118 1.19e-49 168
Msa1048710 MtrunA17_Chr7g0228891 64.957 117 41 0 1 117 1 117 1.21e-49 166
Msa1048710 MtrunA17_Chr2g0311221 63.636 110 40 0 2 111 4 113 2.34e-49 167
Msa1048710 MtrunA17_Chr7g0264641 63.248 117 42 1 1 116 1 117 4.44e-49 165
Msa1048710 MtrunA17_Chr4g0028311 61.983 121 45 1 1 120 1 121 4.94e-49 166
Msa1048710 MtrunA17_Chr5g0435101 61.207 116 45 0 3 118 2 117 6.63e-49 162
Msa1048710 MtrunA17_Chr8g0385321 59.483 116 47 0 1 116 1 116 1.45e-48 165
Msa1048710 MtrunA17_Chr4g0022931 57.480 127 53 1 1 126 1 127 3.97e-48 162
Msa1048710 MtrunA17_Chr3g0121241 61.607 112 43 0 5 116 35 146 2.14e-47 161
Msa1048710 MtrunA17_Chr1g0193371 59.664 119 48 0 1 119 1 119 6.36e-47 162
Msa1048710 MtrunA17_Chr1g0194951 60.345 116 46 0 1 116 1 116 7.55e-47 162
Msa1048710 MtrunA17_Chr2g0327351 63.063 111 40 1 1 110 1 111 1.72e-46 159
Msa1048710 MtrunA17_Chr2g0323351 57.851 121 51 0 1 121 1 121 1.73e-46 157
Msa1048710 MtrunA17_Chr4g0072751 64.865 111 38 1 1 110 1 111 2.06e-46 160
Msa1048710 MtrunA17_Chr4g0058631 60.169 118 47 0 1 118 1 118 3.22e-46 160
Msa1048710 MtrunA17_Chr2g0309911 60.360 111 44 0 6 116 5 115 4.94e-46 158
Msa1048710 MtrunA17_Chr4g0022901 59.483 116 46 1 1 115 1 116 7.90e-46 156
Msa1048710 MtrunA17_Chr5g0397231 62.727 110 41 0 1 110 1 110 8.65e-46 158
Msa1048710 MtrunA17_Chr4g0054391 63.636 110 39 1 1 109 1 110 1.12e-45 157
Msa1048710 MtrunA17_Chr3g0117091 50.303 165 73 2 1 156 1 165 2.04e-45 157
Msa1048710 MtrunA17_Chr7g0270891 57.627 118 50 0 1 118 1 118 3.31e-45 157
Msa1048710 MtrunA17_Chr1g0211161 52.000 150 65 1 3 145 4 153 6.24e-45 153
Msa1048710 MtrunA17_Chr8g0342541 56.897 116 50 0 1 116 1 116 6.80e-45 156
Msa1048710 MtrunA17_Chr2g0330041 58.621 116 48 0 1 116 1 116 6.95e-45 157
Msa1048710 MtrunA17_Chr6g0487491 53.237 139 56 2 1 130 1 139 7.76e-45 154
Msa1048710 MtrunA17_Chr1g0193801 55.932 118 52 0 1 118 1 118 1.45e-44 156
Msa1048710 MtrunA17_Chr8g0342521 56.897 116 50 0 1 116 1 116 2.24e-44 155
Msa1048710 MtrunA17_Chr4g0022911 57.759 116 48 1 1 115 1 116 3.59e-44 153
Msa1048710 MtrunA17_Chr4g0022881 57.018 114 49 0 1 114 1 114 7.73e-44 150
Msa1048710 MtrunA17_Chr7g0271241 62.385 109 41 0 1 109 1 109 3.38e-43 152
Msa1048710 MtrunA17_Chr5g0417821 57.547 106 45 0 11 116 6 111 1.16e-42 149
Msa1048710 MtrunA17_Chr7g0269831 59.483 116 47 0 1 116 1 116 1.87e-42 150
Msa1048710 MtrunA17_Chr4g0022891 57.522 113 48 0 1 113 1 113 3.68e-42 146
Msa1048710 MtrunA17_Chr4g0044421 51.908 131 63 0 1 131 1 131 4.83e-42 144
Msa1048710 MtrunA17_Chr8g0342481 56.410 117 50 1 1 116 1 117 4.95e-42 150
Msa1048710 MtrunA17_Chr1g0203441 58.879 107 44 0 13 119 14 120 6.88e-42 146
Msa1048710 MtrunA17_Chr7g0240821 51.449 138 60 1 17 147 6 143 1.06e-41 144
Msa1048710 MtrunA17_Chr8g0343831 60.909 110 43 0 12 121 8 117 2.03e-41 144
Msa1048710 MtrunA17_Chr3g0080861 59.434 106 43 0 12 117 37 142 2.38e-41 150
Msa1048710 MtrunA17_Chr4g0055981 60.748 107 42 0 9 115 52 158 4.28e-41 143
Msa1048710 MtrunA17_Chr3g0099131 57.009 107 46 0 12 118 41 147 7.37e-41 149
Msa1048710 MtrunA17_Chr5g0434911 57.273 110 47 0 7 116 16 125 1.01e-40 143
Msa1048710 MtrunA17_Chr7g0228231 53.043 115 54 0 12 126 14 128 1.06e-40 141
Msa1048710 MtrunA17_Chr5g0434931 59.434 106 43 0 11 116 34 139 2.08e-40 142
Msa1048710 MtrunA17_Chr2g0328771 58.491 106 44 0 12 117 20 125 2.98e-40 143
Msa1048710 MtrunA17_Chr4g0032401 59.434 106 43 0 12 117 17 122 5.83e-40 143
Msa1048710 MtrunA17_Chr1g0168661 57.143 112 48 0 6 117 15 126 6.16e-40 140
Msa1048710 MtrunA17_Chr8g0354661 58.491 106 44 0 12 117 37 142 7.32e-40 147
Msa1048710 MtrunA17_Chr1g0194291 57.407 108 46 0 11 118 20 127 1.79e-39 140
Msa1048710 MtrunA17_Chr3g0088461 57.273 110 47 0 8 117 18 127 2.67e-39 141
Msa1048710 MtrunA17_Chr6g0450101 50.833 120 57 1 1 118 1 120 5.20e-39 137
Msa1048710 MtrunA17_Chr4g0042611 68.182 88 28 0 1 88 1 88 6.72e-39 132
Msa1048710 MtrunA17_Chr6g0470971 56.250 112 49 0 9 120 11 122 6.82e-39 139
Msa1048710 MtrunA17_Chr1g0194301 51.261 119 58 0 8 126 29 147 8.73e-39 138
Msa1048710 MtrunA17_Chr7g0220341 57.143 112 46 1 11 120 24 135 9.60e-39 138
Msa1048710 MtrunA17_Chr1g0186061 58.095 105 44 0 13 117 21 125 1.06e-38 137
Msa1048710 MtrunA17_Chr5g0434831 56.075 107 47 0 10 116 5 111 2.24e-38 134
Msa1048710 MtrunA17_Chr1g0209661 33.218 289 144 9 12 274 27 292 3.26e-38 137
Msa1048710 MtrunA17_Chr7g0228991 58.491 106 44 0 11 116 28 133 9.78e-38 135
Msa1048710 MtrunA17_Chr1g0154031 56.731 104 45 0 12 115 76 179 1.00e-37 139
Msa1048710 MtrunA17_Chr2g0322521 58.879 107 44 0 9 115 26 132 1.45e-37 138
Msa1048710 MtrunA17_Chr2g0327821 50.435 115 57 0 9 123 3 117 1.55e-37 134
Msa1048710 MtrunA17_Chr5g0434841 56.604 106 46 0 11 116 19 124 2.13e-37 135
Msa1048710 MtrunA17_Chr8g0360111 57.843 102 43 0 11 112 24 125 1.54e-36 132
Msa1048710 MtrunA17_Chr8g0334881 51.852 108 51 1 8 114 6 113 3.96e-35 130
Msa1048710 MtrunA17_Chr7g0247131 75.676 74 18 0 44 117 10 83 5.76e-35 128
Msa1048710 MtrunA17_Chr2g0294811 58.696 92 38 0 1 92 1 92 7.04e-35 123
Msa1048710 MtrunA17_Chr4g0068921 48.739 119 61 0 8 126 20 138 5.38e-34 123
Msa1048710 MtrunA17_Chr2g0293911 51.351 111 54 0 8 118 20 130 1.67e-33 125
Msa1048710 MtrunA17_Chr5g0395221 60.714 84 33 0 5 88 5 88 3.07e-33 118
Msa1048710 MtrunA17_Chr1g0180391 48.624 109 56 0 12 120 19 127 8.16e-33 121
Msa1048710 MtrunA17_Chr2g0323321 51.429 105 50 1 1 105 1 104 2.68e-32 116
Msa1048710 MtrunA17_Chr4g0013361 49.038 104 52 1 12 114 10 113 7.36e-32 120
Msa1048710 MtrunA17_Chr8g0342531 44.828 116 59 1 1 111 1 116 1.56e-31 116
Msa1048710 MtrunA17_Chr3g0099141 52.809 89 42 0 8 96 36 124 2.13e-31 115
Msa1048710 MtrunA17_Chr5g0441131 48.598 107 54 1 12 117 9 115 2.55e-31 116
Msa1048710 MtrunA17_Chr8g0342511 55.172 87 39 0 1 87 1 87 2.83e-31 113
Msa1048710 MtrunA17_Chr4g0030881 48.246 114 52 1 9 115 4 117 5.33e-31 117
Msa1048710 MtrunA17_Chr1g0192411 47.273 110 58 0 8 117 8 117 2.09e-30 119
Msa1048710 MtrunA17_Chr5g0440781 42.336 137 72 3 12 145 12 144 1.91e-29 111
Msa1048710 MtrunA17_Chr5g0440761 42.647 136 71 3 13 145 13 144 4.98e-29 112
Msa1048710 MtrunA17_Chr5g0441141 42.336 137 72 3 12 145 12 144 5.01e-29 112
Msa1048710 MtrunA17_Chr4g0008551 41.007 139 73 2 14 144 38 175 5.39e-29 114
Msa1048710 MtrunA17_Chr8g0342461 52.222 90 42 1 1 89 1 90 1.18e-27 105
Msa1048710 MtrunA17_Chr8g0342471 52.222 90 42 1 1 89 1 90 4.50e-27 103
Msa1048710 MtrunA17_Chr7g0229101 64.286 70 25 0 44 113 4 73 1.05e-26 104
Msa1048710 MtrunA17_Chr5g0401731 49.020 102 51 1 14 115 15 115 1.12e-26 107
Msa1048710 MtrunA17_Chr4g0053431 43.609 133 65 3 14 142 5 131 1.45e-26 105
Msa1048710 MtrunA17_Chr6g0454921 48.039 102 52 1 14 115 15 115 2.38e-26 103
Msa1048710 MtrunA17_Chr3g0133601 47.059 102 53 1 14 115 37 137 9.43e-26 102
Msa1048710 MtrunA17_Chr7g0229131 58.904 73 30 0 44 116 4 76 1.13e-25 100
Msa1048710 MtrunA17_Chr3g0139671 44.660 103 56 1 14 116 85 186 4.35e-25 105
Msa1048710 MtrunA17_Chr3g0139671 31.132 106 71 2 14 118 33 137 1.35e-11 65.5
Msa1048710 MtrunA17_Chr7g0238631 47.573 103 53 1 14 116 113 214 2.10e-24 103
Msa1048710 MtrunA17_Chr1g0157731 41.748 103 59 1 14 116 91 192 8.07e-24 102
Msa1048710 MtrunA17_Chr1g0157731 31.132 106 71 2 14 118 39 143 2.54e-11 64.7
Msa1048710 MtrunA17_Chr6g0480581 44.554 101 55 1 14 114 4 103 1.31e-23 97.4
Msa1048710 MtrunA17_Chr5g0434901 61.765 68 26 0 46 113 7 74 1.33e-23 93.6
Msa1048710 MtrunA17_Chr7g0238651 36.364 121 75 1 17 135 10 130 2.48e-22 95.9
Msa1048710 MtrunA17_Chr5g0429661 40.000 125 72 2 10 134 118 239 3.52e-22 95.5
Msa1048710 MtrunA17_Chr5g0417621 41.905 105 60 1 14 118 134 237 6.33e-22 95.9
Msa1048710 MtrunA17_Chr6g0460671 41.176 102 59 1 14 115 99 199 6.98e-22 94.7
Msa1048710 MtrunA17_Chr4g0058991 40.909 110 64 1 9 118 204 312 9.65e-22 95.5
Msa1048710 MtrunA17_Chr3g0117511 41.905 105 60 1 14 118 183 286 1.84e-21 94.4
Msa1048710 MtrunA17_Chr5g0437321 44.340 106 57 2 8 112 12 116 5.66e-21 90.9
Msa1048710 MtrunA17_Chr4g0042501 37.069 116 72 1 14 129 105 219 5.83e-21 92.8
Msa1048710 MtrunA17_Chr5g0425591 45.783 83 44 1 12 93 9 91 5.99e-21 85.9
Msa1048710 MtrunA17_Chr6g0460661 41.237 97 56 1 14 110 16 111 6.31e-21 87.8
Msa1048710 MtrunA17_Chr7g0228531 41.379 116 65 3 12 126 218 331 1.23e-20 92.0
Msa1048710 MtrunA17_Chr3g0093811 54.430 79 34 1 44 122 14 90 1.14e-19 87.0
Msa1048710 MtrunA17_Chr3g0125801 39.640 111 66 1 8 118 10 119 3.01e-19 86.3
Msa1048710 MtrunA17_Chr5g0397841 42.708 96 54 1 14 109 110 204 4.16e-19 87.8
Msa1048710 MtrunA17_Chr6g0453751 42.391 92 44 2 11 93 19 110 1.53e-18 80.5
Msa1048710 MtrunA17_Chr7g0254261 38.889 108 65 1 14 121 89 195 2.21e-18 84.7
Msa1048710 MtrunA17_Chr7g0228481 38.793 116 68 3 12 126 218 331 3.36e-17 82.0
Msa1048710 MtrunA17_Chr8g0362231 36.522 115 72 1 17 131 25 138 4.78e-17 81.6
Msa1048710 MtrunA17_Chr5g0416341 38.614 101 61 1 17 117 29 128 1.52e-16 80.1
Msa1048710 MtrunA17_Chr7g0228401 43.023 86 48 1 25 110 290 374 2.35e-16 79.7
Msa1048710 MtrunA17_Chr1g0177901 40.594 101 58 2 23 123 3 101 3.14e-16 76.3
Msa1048710 MtrunA17_Chr7g0233061 37.069 116 61 4 14 123 180 289 4.07e-15 75.1
Msa1048710 MtrunA17_Chr1g0193901 51.724 58 27 1 12 68 11 68 4.76e-15 70.5
Msa1048710 MtrunA17_Chr1g0193891 51.724 58 27 1 12 68 11 68 4.76e-15 70.5
Msa1048710 MtrunA17_Chr1g0193871 51.724 58 27 1 12 68 11 68 4.76e-15 70.5
Msa1048710 MtrunA17_Chr1g0193881 51.724 58 27 1 12 68 11 68 4.76e-15 70.5
Msa1048710 MtrunA17_Chr7g0247141 61.702 47 17 1 1 46 1 47 5.83e-15 68.6
Msa1048710 MtrunA17_Chr5g0434871 60.465 43 17 0 74 116 2 44 5.44e-13 63.5
Msa1048710 MtrunA17_Chr5g0434891 66.667 39 13 0 77 115 1 39 6.91e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1048710 AT3G28910.1 55.183 328 106 8 1 308 1 307 1.21e-105 312
Msa1048710 AT5G62470.2 52.616 344 121 6 1 309 1 337 1.64e-103 307
Msa1048710 AT3G47600.1 53.153 333 115 8 1 309 1 316 1.28e-102 305
Msa1048710 AT5G62470.1 52.616 344 120 7 1 309 1 336 5.65e-102 303
Msa1048710 AT1G74650.1 51.198 334 110 9 1 307 1 308 3.76e-91 275
Msa1048710 AT1G08810.1 48.742 318 97 8 1 309 1 261 3.53e-85 258
Msa1048710 AT3G47600.2 47.405 289 111 8 45 309 39 310 4.53e-66 211
Msa1048710 AT3G01140.2 50.237 211 75 5 1 183 1 209 2.94e-62 201
Msa1048710 AT5G15310.4 72.881 118 32 0 1 118 1 118 2.40e-61 196
Msa1048710 AT5G15310.2 72.881 118 32 0 1 118 1 118 5.77e-61 197
Msa1048710 AT5G15310.1 72.881 118 32 0 1 118 1 118 5.88e-61 197
Msa1048710 AT3G01140.1 49.758 207 74 5 5 183 48 252 4.26e-59 195
Msa1048710 AT5G16770.4 50.505 198 82 3 1 188 1 192 7.41e-59 192
Msa1048710 AT5G16770.3 50.505 198 82 3 1 188 1 192 7.41e-59 192
Msa1048710 AT3G02940.2 68.966 116 36 0 1 116 1 116 1.49e-58 191
Msa1048710 AT5G16770.1 50.000 194 89 2 1 188 1 192 2.07e-58 191
Msa1048710 AT5G16770.2 50.000 194 89 2 1 188 1 192 2.07e-58 191
Msa1048710 AT3G02940.1 68.966 116 36 0 1 116 1 116 3.39e-58 190
Msa1048710 AT3G02940.3 68.966 116 36 0 1 116 1 116 3.39e-58 190
Msa1048710 AT2G31180.1 68.908 119 37 0 1 119 1 119 1.55e-57 186
Msa1048710 AT1G06180.1 67.460 126 41 0 1 126 1 126 1.86e-57 186
Msa1048710 AT3G23250.1 66.667 120 40 0 1 120 1 120 2.17e-57 187
Msa1048710 AT4G28110.1 66.387 119 40 0 1 119 1 119 2.96e-57 187
Msa1048710 AT3G61250.1 69.828 116 35 0 1 116 1 116 8.21e-57 186
Msa1048710 AT1G34670.1 67.241 116 38 0 1 116 1 116 6.40e-56 186
Msa1048710 AT4G21440.1 66.102 118 40 0 1 118 1 118 3.97e-55 183
Msa1048710 AT1G56160.1 65.217 115 40 0 2 116 4 118 8.29e-55 181
Msa1048710 AT4G05100.1 65.546 119 40 1 1 118 1 119 6.84e-54 179
Msa1048710 AT1G22640.1 64.655 116 41 0 1 116 1 116 3.99e-53 175
Msa1048710 AT5G10280.1 46.078 204 87 4 1 186 1 199 1.01e-52 176
Msa1048710 AT5G61420.2 63.793 116 42 0 1 116 1 116 1.48e-52 177
Msa1048710 AT2G16720.1 64.655 116 41 0 1 116 1 116 2.25e-52 174
Msa1048710 AT1G66230.1 66.102 118 40 0 1 118 1 118 2.58e-52 174
Msa1048710 AT5G54230.1 66.949 118 39 0 1 118 1 118 3.29e-52 175
Msa1048710 AT1G79180.1 63.559 118 43 0 2 119 4 121 3.34e-52 174
Msa1048710 AT4G17785.2 64.957 117 40 1 1 116 1 117 8.01e-52 175
Msa1048710 AT5G07690.1 63.793 116 42 0 1 116 1 116 1.02e-51 174
Msa1048710 AT5G56110.1 64.655 116 41 0 1 116 1 116 1.04e-51 174
Msa1048710 AT5G60890.1 63.559 118 43 0 1 118 1 118 1.20e-51 172
Msa1048710 AT4G17785.1 64.957 117 40 1 1 116 1 117 1.21e-51 174
Msa1048710 AT4G09460.1 63.793 116 42 0 1 116 1 116 1.79e-51 170
Msa1048710 AT4G38620.1 63.793 116 42 0 1 116 1 116 1.85e-51 172
Msa1048710 AT3G13540.1 55.556 144 58 2 5 142 16 159 2.35e-51 171
Msa1048710 AT5G65230.1 63.793 116 42 0 1 116 1 116 3.52e-51 172
Msa1048710 AT5G49330.1 62.931 116 43 0 1 116 1 116 3.85e-51 172
Msa1048710 AT1G35515.1 62.069 116 44 0 1 116 1 116 4.49e-51 168
Msa1048710 AT4G34990.1 62.931 116 43 0 1 116 1 116 7.09e-51 170
Msa1048710 AT1G18570.1 65.546 119 40 1 1 118 1 119 1.22e-50 172
Msa1048710 AT5G57620.1 61.417 127 48 1 1 126 1 127 1.31e-50 171
Msa1048710 AT1G74080.1 61.864 118 45 0 1 118 1 118 4.58e-50 169
Msa1048710 AT3G49690.1 64.463 121 42 1 1 120 1 121 5.76e-50 169
Msa1048710 AT1G16490.1 58.400 125 51 1 2 126 4 127 6.10e-50 167
Msa1048710 AT4G37780.1 56.296 135 58 1 1 134 1 135 8.43e-50 168
Msa1048710 AT4G12350.1 62.500 120 45 0 1 120 1 120 9.94e-50 167
Msa1048710 AT5G07700.1 61.207 116 45 0 1 116 1 116 1.43e-49 169
Msa1048710 AT5G07700.2 61.207 116 45 0 1 116 1 116 1.43e-49 169
Msa1048710 AT5G16600.1 63.559 118 43 0 1 118 1 118 1.49e-49 168
Msa1048710 AT2G47460.1 61.207 116 45 0 1 116 1 116 4.95e-49 168
Msa1048710 AT5G65790.1 63.636 121 43 1 1 120 1 121 6.84e-49 167
Msa1048710 AT1G74430.1 64.407 118 42 0 1 118 1 118 7.00e-49 165
Msa1048710 AT4G22680.1 63.559 118 43 0 1 118 1 118 9.46e-49 164
Msa1048710 AT3G62610.1 62.931 116 43 0 1 116 1 116 2.11e-48 166
Msa1048710 AT5G23000.1 62.393 117 43 1 1 116 1 117 2.74e-48 165
Msa1048710 AT1G63910.1 61.017 118 46 0 1 118 1 118 3.39e-48 166
Msa1048710 AT2G36890.1 63.248 117 42 1 1 116 1 117 5.68e-48 163
Msa1048710 AT2G36890.2 63.248 117 42 1 1 116 42 158 1.25e-47 163
Msa1048710 AT3G12820.1 62.069 116 44 0 3 118 5 120 1.74e-47 160
Msa1048710 AT5G14750.1 66.346 104 35 0 13 116 17 120 5.85e-47 157
Msa1048710 AT3G28470.1 60.909 110 43 0 1 110 1 110 1.67e-46 160
Msa1048710 AT5G62320.1 52.381 147 62 2 2 141 3 148 2.31e-46 157
Msa1048710 AT5G26660.1 50.000 150 66 1 1 141 1 150 3.39e-46 160
Msa1048710 AT1G18710.1 60.169 118 47 0 1 118 1 118 4.24e-46 157
Msa1048710 AT1G09540.1 55.147 136 61 0 1 136 1 136 5.15e-46 160
Msa1048710 AT1G79180.2 49.669 151 43 1 2 119 4 154 5.27e-46 159
Msa1048710 AT3G13890.2 58.621 116 48 0 1 116 1 116 7.04e-46 159
Msa1048710 AT5G14340.1 60.684 117 46 0 1 117 13 129 7.64e-46 157
Msa1048710 AT4G01680.3 58.974 117 48 0 1 117 1 117 1.51e-45 155
Msa1048710 AT3G28910.2 43.651 252 101 8 77 308 1 231 1.54e-45 155
Msa1048710 AT5G40330.1 64.423 104 37 0 13 116 13 116 1.82e-45 154
Msa1048710 AT4G01680.1 58.974 117 48 0 1 117 1 117 6.94e-45 156
Msa1048710 AT3G27920.1 64.423 104 37 0 13 116 15 118 1.85e-44 152
Msa1048710 AT5G35550.1 59.292 113 46 0 9 121 11 123 1.89e-44 153
Msa1048710 AT1G57560.1 56.780 118 51 0 1 118 1 118 3.29e-44 154
Msa1048710 AT1G57560.2 56.780 118 51 0 1 118 1 118 3.88e-44 152
Msa1048710 AT3G12720.1 57.658 111 47 0 6 116 16 126 5.04e-43 150
Msa1048710 AT3G13890.1 54.400 125 48 1 1 116 1 125 8.45e-43 151
Msa1048710 AT5G52600.1 58.407 113 44 1 6 115 3 115 9.42e-43 147
Msa1048710 AT3G01530.1 56.637 113 48 1 8 119 20 132 1.73e-41 144
Msa1048710 AT4G01680.2 53.488 129 48 1 1 117 1 129 2.05e-41 147
Msa1048710 AT2G32460.1 61.905 105 40 0 11 115 17 121 2.06e-41 150
Msa1048710 AT2G32460.2 61.905 105 40 0 11 115 5 109 2.29e-41 150
Msa1048710 AT3G30210.1 59.633 109 44 0 11 119 26 134 2.91e-41 145
Msa1048710 AT5G55020.1 60.748 107 42 0 12 118 26 132 3.09e-41 150
Msa1048710 AT2G26960.1 60.377 106 42 0 9 114 17 122 1.13e-40 147
Msa1048710 AT1G66370.1 56.522 115 46 1 1 115 1 111 1.15e-40 142
Msa1048710 AT5G06100.1 55.556 108 48 0 8 115 28 135 1.60e-40 147
Msa1048710 AT3G11440.2 55.769 104 46 0 12 115 41 144 4.61e-40 146
Msa1048710 AT5G06100.5 55.556 108 48 0 8 115 28 135 5.00e-40 147
Msa1048710 AT5G06100.2 55.556 108 48 0 8 115 28 135 5.00e-40 147
Msa1048710 AT5G06100.3 55.556 108 48 0 8 115 28 135 5.00e-40 147
Msa1048710 AT5G06100.4 55.556 108 48 0 8 115 28 135 5.00e-40 147
Msa1048710 AT4G26930.1 57.658 111 43 1 8 114 11 121 9.95e-40 144
Msa1048710 AT3G11440.3 55.769 104 46 0 12 115 41 144 1.91e-39 146
Msa1048710 AT3G11440.4 55.769 104 46 0 12 115 41 144 1.91e-39 146
Msa1048710 AT3G11440.1 55.769 104 46 0 12 115 41 144 1.91e-39 146
Msa1048710 AT3G27810.1 54.630 108 49 0 12 119 20 127 2.16e-39 139
Msa1048710 AT3G24310.1 58.716 109 45 0 9 117 15 123 2.52e-39 140
Msa1048710 AT4G13480.1 57.759 116 47 1 13 128 7 120 4.74e-39 139
Msa1048710 AT2G47190.1 56.604 106 46 0 12 117 20 125 7.52e-39 139
Msa1048710 AT5G12870.1 57.944 107 45 0 12 118 18 124 8.39e-39 139
Msa1048710 AT3G08500.1 55.455 110 49 0 8 117 26 135 2.45e-38 139
Msa1048710 AT5G40350.1 54.630 108 49 0 12 119 17 124 2.57e-38 135
Msa1048710 AT3G46130.1 51.786 112 54 0 9 120 6 117 1.16e-37 135
Msa1048710 AT1G25340.1 51.754 114 55 0 13 126 19 132 1.30e-37 135
Msa1048710 AT5G59780.3 51.786 112 54 0 9 120 5 116 3.18e-37 133
Msa1048710 AT4G25560.1 52.991 117 55 0 10 126 8 124 4.27e-37 134
Msa1048710 AT1G68320.1 50.427 117 58 0 10 126 17 133 7.92e-37 134
Msa1048710 AT5G52260.1 45.930 172 81 4 9 180 9 168 9.87e-37 133
Msa1048710 AT3G48920.1 51.304 115 54 1 9 121 15 129 1.12e-36 132
Msa1048710 AT1G48000.1 53.774 106 49 0 12 117 32 137 1.70e-36 132
Msa1048710 AT1G66380.1 57.547 106 45 0 10 115 6 111 1.48e-35 126
Msa1048710 AT1G74650.3 39.922 258 102 9 77 307 1 232 1.15e-34 127
Msa1048710 AT1G66390.1 56.604 106 46 0 10 115 6 111 2.66e-34 126
Msa1048710 AT1G25340.2 50.000 114 52 1 13 126 19 127 4.39e-34 126
Msa1048710 AT1G56650.1 56.604 106 46 0 10 115 6 111 4.53e-34 125
Msa1048710 AT1G25340.3 50.000 114 52 1 13 126 19 127 8.01e-34 126
Msa1048710 AT3G60460.1 50.467 107 52 1 9 114 8 114 1.11e-33 125
Msa1048710 AT5G49620.1 50.435 115 57 0 12 126 26 140 1.70e-32 123
Msa1048710 AT3G06490.1 49.580 119 60 0 8 126 15 133 1.78e-32 123
Msa1048710 AT3G53200.1 48.246 114 59 0 9 122 6 119 6.00e-32 119
Msa1048710 AT5G35550.2 67.532 77 25 0 45 121 50 126 1.03e-31 119
Msa1048710 AT5G14750.3 72.464 69 19 0 48 116 18 86 4.64e-31 115
Msa1048710 AT3G12820.2 70.423 71 21 0 48 118 2 72 3.31e-30 114
Msa1048710 AT5G49620.2 44.961 129 57 1 12 126 26 154 5.83e-29 114
Msa1048710 AT2G26950.1 47.525 101 53 0 9 109 13 113 1.05e-28 114
Msa1048710 AT5G26660.2 49.074 108 46 1 43 141 12 119 1.87e-28 112
Msa1048710 AT2G39880.1 49.057 106 45 2 14 115 50 150 9.40e-28 111
Msa1048710 AT2G23290.1 50.000 102 50 1 14 115 13 113 4.28e-27 108
Msa1048710 AT1G74650.2 38.057 247 100 9 88 307 7 227 4.95e-27 107
Msa1048710 AT5G59780.2 56.410 78 34 0 43 120 18 95 2.20e-26 104
Msa1048710 AT4G37260.1 48.039 102 52 1 14 115 13 113 2.39e-26 106
Msa1048710 AT3G55730.1 47.170 106 47 2 14 115 56 156 2.88e-26 107
Msa1048710 AT3G46130.4 56.410 78 34 0 43 120 18 95 3.29e-26 104
Msa1048710 AT3G46130.3 57.143 77 33 0 44 120 9 85 3.36e-26 104
Msa1048710 AT5G02320.1 48.077 104 53 1 14 117 127 229 5.15e-26 108
Msa1048710 AT5G02320.2 48.077 104 53 1 14 117 127 229 5.15e-26 108
Msa1048710 AT5G02320.3 48.077 104 53 1 14 117 67 169 6.38e-26 107
Msa1048710 AT3G09230.1 42.400 125 52 3 14 134 55 163 2.02e-25 105
Msa1048710 AT3G53200.2 52.381 84 40 0 39 122 3 86 7.09e-25 100
Msa1048710 AT3G27810.2 56.000 75 33 0 45 119 4 78 8.43e-25 99.0
Msa1048710 AT5G11510.3 43.689 103 57 1 14 116 81 182 2.37e-24 104
Msa1048710 AT5G11510.3 31.132 106 71 2 14 118 29 133 2.45e-11 65.1
Msa1048710 AT5G11510.1 43.689 103 57 1 14 116 81 182 2.37e-24 104
Msa1048710 AT5G11510.1 31.132 106 71 2 14 118 29 133 2.45e-11 65.1
Msa1048710 AT5G11510.4 43.689 103 57 1 14 116 81 182 2.37e-24 104
Msa1048710 AT5G11510.4 31.132 106 71 2 14 118 29 133 2.45e-11 65.1
Msa1048710 AT5G11510.2 43.925 107 51 2 14 116 81 182 2.98e-24 103
Msa1048710 AT5G11510.2 31.132 106 71 2 14 118 29 133 2.70e-11 65.1
Msa1048710 AT5G11510.5 43.925 107 51 2 14 116 81 182 3.00e-24 103
Msa1048710 AT5G11510.5 31.132 106 71 2 14 118 29 133 2.57e-11 65.1
Msa1048710 AT3G27785.1 42.241 116 66 1 9 124 184 298 5.40e-24 102
Msa1048710 AT1G69560.1 42.727 110 62 1 9 118 102 210 5.97e-24 100
Msa1048710 AT1G69560.2 42.727 110 62 1 9 118 118 226 6.83e-24 100
Msa1048710 AT4G32730.5 41.748 103 59 1 14 116 87 188 7.25e-24 102
Msa1048710 AT4G32730.4 41.748 103 59 1 14 116 87 188 7.25e-24 102
Msa1048710 AT4G32730.3 41.748 103 59 1 14 116 87 188 7.25e-24 102
Msa1048710 AT4G32730.2 41.748 103 59 1 14 116 87 188 7.25e-24 102
Msa1048710 AT4G32730.1 41.748 103 59 1 14 116 87 188 7.60e-24 102
Msa1048710 AT1G66380.3 63.889 72 26 0 44 115 7 78 9.32e-24 94.0
Msa1048710 AT5G40350.2 56.000 75 33 0 45 119 5 79 1.09e-23 95.9
Msa1048710 AT3G50060.1 45.098 102 55 1 14 115 6 106 1.89e-23 98.6
Msa1048710 AT5G40360.1 39.823 113 66 2 9 121 153 263 2.17e-23 99.4
Msa1048710 AT1G17950.1 43.137 102 57 1 14 115 5 105 2.49e-23 97.1
Msa1048710 AT1G26780.1 41.284 109 63 1 14 122 98 205 3.70e-23 97.4
Msa1048710 AT5G67300.1 32.022 178 96 3 14 191 6 158 3.76e-23 97.8
Msa1048710 AT1G22640.3 68.966 58 18 0 59 116 2 59 4.23e-23 95.1
Msa1048710 AT5G14750.4 70.690 58 17 0 59 116 2 59 5.40e-23 93.2
Msa1048710 AT5G14750.2 70.690 58 17 0 59 116 2 59 5.40e-23 93.2
Msa1048710 AT1G26780.2 41.284 109 63 1 14 122 98 205 8.02e-23 97.8
Msa1048710 AT3G09370.1 45.098 102 55 1 14 115 130 230 1.20e-22 98.6
Msa1048710 AT3G09370.2 45.098 102 55 1 14 115 135 235 1.21e-22 98.6
Msa1048710 AT3G23250.2 66.129 62 21 0 59 120 2 63 1.32e-22 94.7
Msa1048710 AT3G09370.3 45.098 102 55 1 14 115 143 243 1.39e-22 98.6
Msa1048710 AT2G37630.1 37.190 121 73 2 17 135 7 126 3.30e-22 96.3
Msa1048710 AT5G58850.1 35.433 127 81 1 14 140 105 230 3.97e-22 96.7
Msa1048710 AT5G11050.1 36.567 134 81 3 12 143 103 234 4.28e-22 96.3
Msa1048710 AT4G18770.1 38.393 112 68 1 9 120 212 322 5.51e-22 96.3
Msa1048710 AT1G66380.2 47.475 99 51 1 10 107 6 104 5.73e-22 89.4
Msa1048710 AT5G17800.1 40.187 107 63 1 14 120 93 198 3.51e-21 92.8
Msa1048710 AT1G18960.1 43.689 103 55 2 14 116 10 109 4.23e-21 92.0
Msa1048710 AT4G33450.1 37.838 111 68 1 9 119 14 123 5.95e-21 90.5
Msa1048710 AT1G73410.1 41.509 106 61 1 14 119 6 110 9.00e-21 90.1
Msa1048710 AT1G73410.2 41.509 106 61 1 14 119 6 110 1.85e-20 88.2
Msa1048710 AT1G08810.3 34.052 232 87 8 88 310 5 179 2.51e-20 87.8
Msa1048710 AT1G08810.2 34.052 232 87 8 88 310 5 179 2.51e-20 87.8
Msa1048710 AT1G71030.1 48.148 81 41 1 38 118 7 86 2.84e-19 84.7
Msa1048710 AT5G39700.1 37.273 110 68 1 9 118 51 159 3.59e-19 84.3
Msa1048710 AT1G71030.2 52.941 68 32 0 51 118 5 72 3.98e-19 84.0
Msa1048710 AT3G29020.1 36.190 105 66 1 14 118 65 168 5.77e-19 84.7
Msa1048710 AT2G25230.1 37.410 139 72 5 9 135 21 156 8.27e-19 84.3
Msa1048710 AT3G29020.2 36.190 105 66 1 14 118 67 170 1.32e-18 85.1
Msa1048710 AT4G00540.2 38.182 110 64 2 12 118 101 209 1.56e-17 83.2
Msa1048710 AT2G02820.3 35.246 122 75 2 17 135 33 153 1.65e-17 82.4
Msa1048710 AT4G00540.1 38.182 110 64 2 12 118 99 207 2.52e-17 82.8
Msa1048710 AT2G02820.2 35.246 122 75 2 17 135 33 153 2.84e-17 82.8
Msa1048710 AT2G02820.1 35.246 122 75 2 17 135 33 153 2.98e-17 82.4
Msa1048710 AT1G14350.2 38.614 101 61 1 17 117 28 127 3.12e-17 82.4
Msa1048710 AT1G14350.1 38.614 101 61 1 17 117 28 127 3.12e-17 82.4
Msa1048710 AT5G40430.1 34.711 121 72 3 9 124 49 167 1.13e-15 75.9
Msa1048710 AT4G25560.2 53.704 54 25 0 73 126 5 58 1.44e-12 66.6
Msa1048710 AT5G59780.1 50.980 51 25 0 70 120 1 51 1.05e-11 63.2
Msa1048710 AT3G46130.2 50.980 51 25 0 70 120 1 51 1.49e-11 63.2

Find 73 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGAACACAATTTAAAGTT+AGG 0.242581 7_2:+10522924 Msa1048710:three_prime_UTR
AACATAGCTCGTTTACTAAA+AGG 0.252975 7_2:+10522294 Msa1048710:CDS
CTAAAACCTCTTGATTTGAT+AGG 0.282858 7_2:-10520753 None:intergenic
CTTCTTTCCCATTGACCTCT+TGG 0.294000 7_2:-10522111 None:intergenic
AAGAACATGGTCCTGGAAAT+TGG 0.298566 7_2:+10520994 Msa1048710:CDS
AGTTGTCCTGAAAAGGTATT+AGG 0.303742 7_2:+10522612 Msa1048710:CDS
TGTTGCTTGCTTGGTTCTAA+TGG 0.351821 7_2:+10522769 Msa1048710:three_prime_UTR
GAAACATTTGAATATTTGTT+TGG 0.362826 7_2:+10522432 Msa1048710:CDS
ATGTCATTATCTGTTCTTTG+TGG 0.377477 7_2:-10521976 None:intergenic
GTACTAACCGATGATTTGAT+TGG 0.381105 7_2:-10522330 None:intergenic
GAAAATGAGTTACTATTTGT+AGG 0.397920 7_2:-10522222 None:intergenic
TTGTGATGATGTTGCTTGCT+TGG 0.400090 7_2:+10522760 Msa1048710:three_prime_UTR
GGAACAGCCCTCCAATTTCC+AGG 0.403047 7_2:-10521005 None:intergenic
GCAAAAGTTGCAGACTTAGA+TGG 0.403906 7_2:+10521322 Msa1048710:CDS
ACAAGTATGATATCTTCTTC+AGG 0.408889 7_2:-10520960 None:intergenic
AAGGTCTATAGAATAGAAAT+TGG 0.417780 7_2:+10520832 Msa1048710:five_prime_UTR
TTCCTAAAAGATCTTGAAGA+TGG 0.422826 7_2:-10521410 None:intergenic
TATGAACTATTAACCTGTCT+TGG 0.426618 7_2:-10521030 None:intergenic
AGATTGACCTGGTTCTTTAG+TGG 0.427373 7_2:-10522247 None:intergenic
TGGAACACAATTTAAAGTTA+GGG 0.434797 7_2:+10522925 Msa1048710:three_prime_UTR
AGAGAGGGAGAAGAAGAAAA+AGG 0.442631 7_2:+10520813 Msa1048710:five_prime_UTR
CCATTTCTCAAGCAAAGAAA+AGG 0.449839 7_2:-10522574 None:intergenic
TCTTGTAAAACCGTTGCGTC+TGG 0.450422 7_2:-10522516 None:intergenic
AACTATTAACCTGTCTTGGT+TGG 0.452548 7_2:-10521026 None:intergenic
AAGAATTCCAAGAGGTCAAT+GGG 0.456644 7_2:+10522104 Msa1048710:CDS
ACCTAAGGCCAGGAATCAAA+AGG 0.458436 7_2:+10521352 Msa1048710:CDS
AAAGAATTCCAAGAGGTCAA+TGG 0.463998 7_2:+10522103 Msa1048710:CDS
AAAATGAGTTACTATTTGTA+GGG 0.472669 7_2:-10522221 None:intergenic
CTCTAAAATCGTTGCAATTG+TGG 0.474970 7_2:+10522905 Msa1048710:three_prime_UTR
AGCAGAATCAAAGTTGTTGA+AGG 0.476547 7_2:-10522376 None:intergenic
TGAAGCAAGTTGTCCTGAAA+AGG 0.483879 7_2:+10522605 Msa1048710:CDS
CAATCTTTGATGTATTGCCT+TGG 0.485774 7_2:+10523023 Msa1048710:three_prime_UTR
CATTATCTGTTCTTTGTGGA+AGG 0.487830 7_2:-10521972 None:intergenic
ATTGATTCTGAACCAACATC+AGG 0.495731 7_2:-10522549 None:intergenic
TATATACAAGAACATGGTCC+TGG 0.507906 7_2:+10520987 Msa1048710:CDS
TTTGATTCTGCTTCTAGTAG+TGG 0.508963 7_2:+10522387 Msa1048710:CDS
AGGGCTGTTCCAACCAAGAC+AGG 0.512302 7_2:+10521017 Msa1048710:CDS
AAGCTCAAGAAATCACAAAC+AGG 0.513721 7_2:+10522030 Msa1048710:CDS
TAGCTCGTTTACTAAAAGGT+TGG 0.524179 7_2:+10522298 Msa1048710:CDS
CCTAAGGCCAGGAATCAAAA+GGG 0.528003 7_2:+10521353 Msa1048710:CDS
TTGAAACCTATCAAATCAAG+AGG 0.529011 7_2:+10520747 None:intergenic
TTATATGATTTCTATAGGAA+AGG 0.530672 7_2:+10522991 Msa1048710:three_prime_UTR
TGGACTAATTACCTAAGGCC+AGG 0.531588 7_2:+10521342 Msa1048710:CDS
TGTATCTTACTGCAACGTAA+AGG 0.535748 7_2:-10522838 None:intergenic
TTCAAGTTCTGAAATATATG+TGG 0.543756 7_2:+10522948 Msa1048710:three_prime_UTR
TGCTTCTAGTAGTGGAACAA+AGG 0.546510 7_2:+10522395 Msa1048710:CDS
ACTTCAAACAGATATTCAAA+TGG 0.548282 7_2:+10522134 Msa1048710:CDS
CCTGAAAAGGTATTAGGTTG+TGG 0.555878 7_2:+10522618 Msa1048710:CDS
AAAAGAGAAACAAAGAAACA+TGG 0.557302 7_2:+10520887 Msa1048710:exon
ATCTTTGTCACCAGACGCAA+CGG 0.557723 7_2:+10522506 Msa1048710:CDS
AAAGAGAAACAAAGAAACAT+GGG 0.560455 7_2:+10520888 Msa1048710:exon
ATATCTTCTTCAGGAGTCCA+TGG 0.561586 7_2:-10520951 None:intergenic
CATTTCTCAAGCAAAGAAAA+GGG 0.562614 7_2:-10522573 None:intergenic
GCTTCTAGTAGTGGAACAAA+GGG 0.568848 7_2:+10522396 Msa1048710:CDS
GTCTATAGAATAGAAATTGG+TGG 0.569327 7_2:+10520835 Msa1048710:five_prime_UTR
TTAGATGGACTAATTACCTA+AGG 0.574462 7_2:+10521337 Msa1048710:CDS
GATGAAAGTAAGCCTGATGT+TGG 0.577667 7_2:+10522537 Msa1048710:CDS
CTTGTTTCTCTTCAGTACCA+AGG 0.584182 7_2:-10523040 None:intergenic
GGGTAACTTCACTGAACAAG+AGG 0.588024 7_2:+10521374 Msa1048710:CDS
AAGTGATCATACACTGAGAG+AGG 0.593879 7_2:+10520797 Msa1048710:five_prime_UTR
AGTGATCATACACTGAGAGA+GGG 0.610005 7_2:+10520798 Msa1048710:five_prime_UTR
AACATGGTCCTGGAAATTGG+AGG 0.614224 7_2:+10520997 Msa1048710:CDS
ACACCTTCTTTGTCACAACA+AGG 0.616257 7_2:-10520918 None:intergenic
CCACCTTGTTGTGACAAAGA+AGG 0.618215 7_2:+10520915 Msa1048710:CDS
ACATGGTCCTGGAAATTGGA+GGG 0.621706 7_2:+10520998 Msa1048710:CDS
GATGACTCCAAAGACTCCAA+AGG 0.639736 7_2:-10522462 None:intergenic
CAGTAAGATACAAACAAATG+TGG 0.641783 7_2:+10522849 Msa1048710:three_prime_UTR
ATACTAGCGAAGCTGAAATG+TGG 0.643699 7_2:+10522737 Msa1048710:three_prime_UTR
GTTACTTATATACAAGAACA+TGG 0.665375 7_2:+10520981 Msa1048710:CDS
CTAAGGCCAGGAATCAAAAG+GGG 0.682983 7_2:+10521354 Msa1048710:CDS
CCTTCTTTGTCACAACAAGG+TGG 0.693026 7_2:-10520915 None:intergenic
GAAAAGGTATTAGGTTGTGG+TGG 0.702340 7_2:+10522621 Msa1048710:CDS
GCATCTCAAAGAATTCCAAG+AGG 0.704482 7_2:+10522096 Msa1048710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTATTACTTAAC+TGG + chr7_2:10521190-10521209 Msa1048710:intron 10.0%
!!! ATTAATTTATTTGATTTTTG+TGG + chr7_2:10521271-10521290 Msa1048710:intron 10.0%
!!! CAAATTATTTATTTGTTTTA+AGG + chr7_2:10521485-10521504 Msa1048710:intron 10.0%
!! TACAAAAAATTATAGAAATA+GGG - chr7_2:10521735-10521754 None:intergenic 10.0%
!! ATACAAAAAATTATAGAAAT+AGG - chr7_2:10521736-10521755 None:intergenic 10.0%
!! AAAAAAACTACTAAAAAAAT+TGG - chr7_2:10521876-10521895 None:intergenic 10.0%
!!! ATTTTTTTAGTAGTTTTTTT+TGG + chr7_2:10521876-10521895 Msa1048710:intron 10.0%
!!! TTTTATTTTTATTACTTAAC+TGG + chr7_2:10521190-10521209 Msa1048710:intron 10.0%
!!! ATTAATTTATTTGATTTTTG+TGG + chr7_2:10521271-10521290 Msa1048710:intron 10.0%
!!! CAAATTATTTATTTGTTTTA+AGG + chr7_2:10521485-10521504 Msa1048710:intron 10.0%
!! TACAAAAAATTATAGAAATA+GGG - chr7_2:10521735-10521754 None:intergenic 10.0%
!! ATACAAAAAATTATAGAAAT+AGG - chr7_2:10521736-10521755 None:intergenic 10.0%
!! AAAAAAACTACTAAAAAAAT+TGG - chr7_2:10521876-10521895 None:intergenic 10.0%
!!! ATTTTTTTAGTAGTTTTTTT+TGG + chr7_2:10521876-10521895 Msa1048710:intron 10.0%
!! ATTTAAATATCCCTAAAAAA+AGG + chr7_2:10521776-10521795 Msa1048710:intron 15.0%
!! ATAATGACATAAAAAACTAT+TGG + chr7_2:10521989-10522008 Msa1048710:CDS 15.0%
!!! AAATTAGAAGATAATTTTTG+TGG - chr7_2:10522189-10522208 None:intergenic 15.0%
!!! TTGTTTTATATGATTTCTAT+AGG + chr7_2:10522986-10523005 Msa1048710:three_prime_UTR 15.0%
!! ATTTAAATATCCCTAAAAAA+AGG + chr7_2:10521776-10521795 Msa1048710:intron 15.0%
!! ATAATGACATAAAAAACTAT+TGG + chr7_2:10521989-10522008 Msa1048710:CDS 15.0%
!!! AAATTAGAAGATAATTTTTG+TGG - chr7_2:10522189-10522208 None:intergenic 15.0%
!!! TTGTTTTATATGATTTCTAT+AGG + chr7_2:10522986-10523005 Msa1048710:three_prime_UTR 15.0%
!! GTATATCATAGATCATTAAT+AGG + chr7_2:10521117-10521136 Msa1048710:intron 20.0%
!! TGATCATGAATACATTATTT+AGG + chr7_2:10521167-10521186 Msa1048710:intron 20.0%
!!! TTTTTGTGGATTAATTTTTC+AGG + chr7_2:10521285-10521304 Msa1048710:intron 20.0%
!!! TTTTGTGGATTAATTTTTCA+GGG + chr7_2:10521286-10521305 Msa1048710:intron 20.0%
!!! AGCATTTGATTTCATTTTTT+AGG + chr7_2:10521579-10521598 Msa1048710:intron 20.0%
!!! ATTAAATTTAGGACATAAGT+TGG + chr7_2:10521619-10521638 Msa1048710:intron 20.0%
!! ATCTTTATGGAATTAAAAAC+AGG - chr7_2:10521655-10521674 None:intergenic 20.0%
!! TCATAACTAGTATATCTTTA+TGG - chr7_2:10521668-10521687 None:intergenic 20.0%
!!! ATTAGCAAATCCTTTTTTTA+GGG - chr7_2:10521789-10521808 None:intergenic 20.0%
!!! TATTAGCAAATCCTTTTTTT+AGG - chr7_2:10521790-10521809 None:intergenic 20.0%
!! AAAATGAGTTACTATTTGTA+GGG - chr7_2:10522224-10522243 None:intergenic 20.0%
!! GAAACATTTGAATATTTGTT+TGG + chr7_2:10522432-10522451 Msa1048710:CDS 20.0%
!!! TTAGTTTTAATCTGCATTTA+CGG + chr7_2:10522676-10522695 Msa1048710:three_prime_UTR 20.0%
!! TTATATGATTTCTATAGGAA+AGG + chr7_2:10522991-10523010 Msa1048710:three_prime_UTR 20.0%
!! GTATATCATAGATCATTAAT+AGG + chr7_2:10521117-10521136 Msa1048710:intron 20.0%
!! TGATCATGAATACATTATTT+AGG + chr7_2:10521167-10521186 Msa1048710:intron 20.0%
!!! TTTTTGTGGATTAATTTTTC+AGG + chr7_2:10521285-10521304 Msa1048710:intron 20.0%
!!! TTTTGTGGATTAATTTTTCA+GGG + chr7_2:10521286-10521305 Msa1048710:intron 20.0%
!!! AGCATTTGATTTCATTTTTT+AGG + chr7_2:10521579-10521598 Msa1048710:intron 20.0%
!!! ATTAAATTTAGGACATAAGT+TGG + chr7_2:10521619-10521638 Msa1048710:intron 20.0%
!! ATCTTTATGGAATTAAAAAC+AGG - chr7_2:10521655-10521674 None:intergenic 20.0%
!! TCATAACTAGTATATCTTTA+TGG - chr7_2:10521668-10521687 None:intergenic 20.0%
!!! ATTAGCAAATCCTTTTTTTA+GGG - chr7_2:10521789-10521808 None:intergenic 20.0%
!!! TATTAGCAAATCCTTTTTTT+AGG - chr7_2:10521790-10521809 None:intergenic 20.0%
!! AAAATGAGTTACTATTTGTA+GGG - chr7_2:10522224-10522243 None:intergenic 20.0%
!! GAAACATTTGAATATTTGTT+TGG + chr7_2:10522432-10522451 Msa1048710:CDS 20.0%
!!! TTAGTTTTAATCTGCATTTA+CGG + chr7_2:10522676-10522695 Msa1048710:three_prime_UTR 20.0%
!! TTATATGATTTCTATAGGAA+AGG + chr7_2:10522991-10523010 Msa1048710:three_prime_UTR 20.0%
! AAGGTCTATAGAATAGAAAT+TGG + chr7_2:10520832-10520851 Msa1048710:five_prime_UTR 25.0%
! AAAAGAGAAACAAAGAAACA+TGG + chr7_2:10520887-10520906 Msa1048710:exon 25.0%
! AAAGAGAAACAAAGAAACAT+GGG + chr7_2:10520888-10520907 Msa1048710:exon 25.0%
! GTTACTTATATACAAGAACA+TGG + chr7_2:10520981-10521000 Msa1048710:CDS 25.0%
!!! TTCAAGATCTTTTAGGAAAT+AGG + chr7_2:10521415-10521434 Msa1048710:CDS 25.0%
! AGTAGCAAATTATGAAGAAA+AGG - chr7_2:10521445-10521464 None:intergenic 25.0%
! TTATGAGAGAATATAAGTGT+TGG + chr7_2:10521682-10521701 Msa1048710:intron 25.0%
! TAGGGACACAAATTAAAAAT+AGG - chr7_2:10521717-10521736 None:intergenic 25.0%
! TATATTAGACTTGTCCTAAA+TGG + chr7_2:10521753-10521772 Msa1048710:intron 25.0%
! AGGGATATTTAAATCCATTT+AGG - chr7_2:10521770-10521789 None:intergenic 25.0%
! AACATTTATGATGTAACAGA+TGG + chr7_2:10521932-10521951 Msa1048710:intron 25.0%
! ACATTTATGATGTAACAGAT+GGG + chr7_2:10521933-10521952 Msa1048710:intron 25.0%
! ACTTCAAACAGATATTCAAA+TGG + chr7_2:10522134-10522153 Msa1048710:CDS 25.0%
! GAAAATGAGTTACTATTTGT+AGG - chr7_2:10522225-10522244 None:intergenic 25.0%
! GAAAAATCCAATCAAATCAT+CGG + chr7_2:10522323-10522342 Msa1048710:CDS 25.0%
!! TGGAACACAATTTAAAGTTA+GGG + chr7_2:10522925-10522944 Msa1048710:three_prime_UTR 25.0%
!!! TTCAAGTTCTGAAATATATG+TGG + chr7_2:10522948-10522967 Msa1048710:three_prime_UTR 25.0%
! AAGGTCTATAGAATAGAAAT+TGG + chr7_2:10520832-10520851 Msa1048710:five_prime_UTR 25.0%
! AAAAGAGAAACAAAGAAACA+TGG + chr7_2:10520887-10520906 Msa1048710:exon 25.0%
! AAAGAGAAACAAAGAAACAT+GGG + chr7_2:10520888-10520907 Msa1048710:exon 25.0%
! GTTACTTATATACAAGAACA+TGG + chr7_2:10520981-10521000 Msa1048710:CDS 25.0%
!!! TTCAAGATCTTTTAGGAAAT+AGG + chr7_2:10521415-10521434 Msa1048710:CDS 25.0%
! AGTAGCAAATTATGAAGAAA+AGG - chr7_2:10521445-10521464 None:intergenic 25.0%
! TTATGAGAGAATATAAGTGT+TGG + chr7_2:10521682-10521701 Msa1048710:intron 25.0%
! TAGGGACACAAATTAAAAAT+AGG - chr7_2:10521717-10521736 None:intergenic 25.0%
! TATATTAGACTTGTCCTAAA+TGG + chr7_2:10521753-10521772 Msa1048710:intron 25.0%
! AGGGATATTTAAATCCATTT+AGG - chr7_2:10521770-10521789 None:intergenic 25.0%
! AACATTTATGATGTAACAGA+TGG + chr7_2:10521932-10521951 Msa1048710:intron 25.0%
! ACATTTATGATGTAACAGAT+GGG + chr7_2:10521933-10521952 Msa1048710:intron 25.0%
! ACTTCAAACAGATATTCAAA+TGG + chr7_2:10522134-10522153 Msa1048710:CDS 25.0%
! GAAAATGAGTTACTATTTGT+AGG - chr7_2:10522225-10522244 None:intergenic 25.0%
! GAAAAATCCAATCAAATCAT+CGG + chr7_2:10522323-10522342 Msa1048710:CDS 25.0%
!! TGGAACACAATTTAAAGTTA+GGG + chr7_2:10522925-10522944 Msa1048710:three_prime_UTR 25.0%
!!! TTCAAGTTCTGAAATATATG+TGG + chr7_2:10522948-10522967 Msa1048710:three_prime_UTR 25.0%
GTCTATAGAATAGAAATTGG+TGG + chr7_2:10520835-10520854 Msa1048710:five_prime_UTR 30.0%
!! GACAAAGAAGGTGTTAAAAA+AGG + chr7_2:10520927-10520946 Msa1048710:CDS 30.0%
ACAAGTATGATATCTTCTTC+AGG - chr7_2:10520963-10520982 None:intergenic 30.0%
TATGAACTATTAACCTGTCT+TGG - chr7_2:10521033-10521052 None:intergenic 30.0%
!! TTAGATGGACTAATTACCTA+AGG + chr7_2:10521337-10521356 Msa1048710:CDS 30.0%
! ATCCATCTTCAAGATCTTTT+AGG + chr7_2:10521408-10521427 Msa1048710:CDS 30.0%
TTCCTAAAAGATCTTGAAGA+TGG - chr7_2:10521413-10521432 None:intergenic 30.0%
TTATGATTCACATGTCTAAC+TGG + chr7_2:10521907-10521926 Msa1048710:intron 30.0%
ATGTCATTATCTGTTCTTTG+TGG - chr7_2:10521979-10521998 None:intergenic 30.0%
!!! TGCTTCATTAAGTGCTTTTT+TGG - chr7_2:10522160-10522179 None:intergenic 30.0%
AACATAGCTCGTTTACTAAA+AGG + chr7_2:10522294-10522313 Msa1048710:CDS 30.0%
CATTTCTCAAGCAAAGAAAA+GGG - chr7_2:10522576-10522595 None:intergenic 30.0%
CAGTAAGATACAAACAAATG+TGG + chr7_2:10522849-10522868 Msa1048710:three_prime_UTR 30.0%
! GTGGAACACAATTTAAAGTT+AGG + chr7_2:10522924-10522943 Msa1048710:three_prime_UTR 30.0%
! AGTCAAGCAAGTTTTCATTA+TGG - chr7_2:10523106-10523125 None:intergenic 30.0%
GTCTATAGAATAGAAATTGG+TGG + chr7_2:10520835-10520854 Msa1048710:five_prime_UTR 30.0%
!! GACAAAGAAGGTGTTAAAAA+AGG + chr7_2:10520927-10520946 Msa1048710:CDS 30.0%
ACAAGTATGATATCTTCTTC+AGG - chr7_2:10520963-10520982 None:intergenic 30.0%
TATGAACTATTAACCTGTCT+TGG - chr7_2:10521033-10521052 None:intergenic 30.0%
!! TTAGATGGACTAATTACCTA+AGG + chr7_2:10521337-10521356 Msa1048710:CDS 30.0%
! ATCCATCTTCAAGATCTTTT+AGG + chr7_2:10521408-10521427 Msa1048710:CDS 30.0%
TTCCTAAAAGATCTTGAAGA+TGG - chr7_2:10521413-10521432 None:intergenic 30.0%
TTATGATTCACATGTCTAAC+TGG + chr7_2:10521907-10521926 Msa1048710:intron 30.0%
ATGTCATTATCTGTTCTTTG+TGG - chr7_2:10521979-10521998 None:intergenic 30.0%
!!! TGCTTCATTAAGTGCTTTTT+TGG - chr7_2:10522160-10522179 None:intergenic 30.0%
AACATAGCTCGTTTACTAAA+AGG + chr7_2:10522294-10522313 Msa1048710:CDS 30.0%
CATTTCTCAAGCAAAGAAAA+GGG - chr7_2:10522576-10522595 None:intergenic 30.0%
CAGTAAGATACAAACAAATG+TGG + chr7_2:10522849-10522868 Msa1048710:three_prime_UTR 30.0%
! GTGGAACACAATTTAAAGTT+AGG + chr7_2:10522924-10522943 Msa1048710:three_prime_UTR 30.0%
! AGTCAAGCAAGTTTTCATTA+TGG - chr7_2:10523106-10523125 None:intergenic 30.0%
! AAGGTGTTAAAAAAGGACCA+TGG + chr7_2:10520934-10520953 Msa1048710:CDS 35.0%
TATATACAAGAACATGGTCC+TGG + chr7_2:10520987-10521006 Msa1048710:CDS 35.0%
AACTATTAACCTGTCTTGGT+TGG - chr7_2:10521029-10521048 None:intergenic 35.0%
TAGGAAAATCATGATCCAAG+AGG + chr7_2:10521136-10521155 Msa1048710:intron 35.0%
CATTATCTGTTCTTTGTGGA+AGG - chr7_2:10521975-10521994 None:intergenic 35.0%
AAGCTCAAGAAATCACAAAC+AGG + chr7_2:10522030-10522049 Msa1048710:CDS 35.0%
AAAGAATTCCAAGAGGTCAA+TGG + chr7_2:10522103-10522122 Msa1048710:CDS 35.0%
AAGAATTCCAAGAGGTCAAT+GGG + chr7_2:10522104-10522123 Msa1048710:CDS 35.0%
! TTTTCTTCCACTAAAGAACC+AGG + chr7_2:10522240-10522259 Msa1048710:CDS 35.0%
TAGCTCGTTTACTAAAAGGT+TGG + chr7_2:10522298-10522317 Msa1048710:CDS 35.0%
GTACTAACCGATGATTTGAT+TGG - chr7_2:10522333-10522352 None:intergenic 35.0%
AGCAGAATCAAAGTTGTTGA+AGG - chr7_2:10522379-10522398 None:intergenic 35.0%
TTTGATTCTGCTTCTAGTAG+TGG + chr7_2:10522387-10522406 Msa1048710:CDS 35.0%
!!! TTTGTTTGGTTTTGAGCCTT+TGG + chr7_2:10522446-10522465 Msa1048710:CDS 35.0%
! ATTGATTCTGAACCAACATC+AGG - chr7_2:10522552-10522571 None:intergenic 35.0%
CCATTTCTCAAGCAAAGAAA+AGG - chr7_2:10522577-10522596 None:intergenic 35.0%
! CCTTTTCTTTGCTTGAGAAA+TGG + chr7_2:10522574-10522593 Msa1048710:CDS 35.0%
!! AGTTGTCCTGAAAAGGTATT+AGG + chr7_2:10522612-10522631 Msa1048710:CDS 35.0%
TGTATCTTACTGCAACGTAA+AGG - chr7_2:10522841-10522860 None:intergenic 35.0%
! CACAATTGCAACGATTTTAG+AGG - chr7_2:10522907-10522926 None:intergenic 35.0%
!! CTCTAAAATCGTTGCAATTG+TGG + chr7_2:10522905-10522924 Msa1048710:three_prime_UTR 35.0%
CAATCTTTGATGTATTGCCT+TGG + chr7_2:10523023-10523042 Msa1048710:three_prime_UTR 35.0%
! AAGGTGTTAAAAAAGGACCA+TGG + chr7_2:10520934-10520953 Msa1048710:CDS 35.0%
TATATACAAGAACATGGTCC+TGG + chr7_2:10520987-10521006 Msa1048710:CDS 35.0%
AACTATTAACCTGTCTTGGT+TGG - chr7_2:10521029-10521048 None:intergenic 35.0%
TAGGAAAATCATGATCCAAG+AGG + chr7_2:10521136-10521155 Msa1048710:intron 35.0%
CATTATCTGTTCTTTGTGGA+AGG - chr7_2:10521975-10521994 None:intergenic 35.0%
AAGCTCAAGAAATCACAAAC+AGG + chr7_2:10522030-10522049 Msa1048710:CDS 35.0%
AAAGAATTCCAAGAGGTCAA+TGG + chr7_2:10522103-10522122 Msa1048710:CDS 35.0%
AAGAATTCCAAGAGGTCAAT+GGG + chr7_2:10522104-10522123 Msa1048710:CDS 35.0%
! TTTTCTTCCACTAAAGAACC+AGG + chr7_2:10522240-10522259 Msa1048710:CDS 35.0%
TAGCTCGTTTACTAAAAGGT+TGG + chr7_2:10522298-10522317 Msa1048710:CDS 35.0%
GTACTAACCGATGATTTGAT+TGG - chr7_2:10522333-10522352 None:intergenic 35.0%
AGCAGAATCAAAGTTGTTGA+AGG - chr7_2:10522379-10522398 None:intergenic 35.0%
TTTGATTCTGCTTCTAGTAG+TGG + chr7_2:10522387-10522406 Msa1048710:CDS 35.0%
!!! TTTGTTTGGTTTTGAGCCTT+TGG + chr7_2:10522446-10522465 Msa1048710:CDS 35.0%
! ATTGATTCTGAACCAACATC+AGG - chr7_2:10522552-10522571 None:intergenic 35.0%
CCATTTCTCAAGCAAAGAAA+AGG - chr7_2:10522577-10522596 None:intergenic 35.0%
! CCTTTTCTTTGCTTGAGAAA+TGG + chr7_2:10522574-10522593 Msa1048710:CDS 35.0%
!! AGTTGTCCTGAAAAGGTATT+AGG + chr7_2:10522612-10522631 Msa1048710:CDS 35.0%
TGTATCTTACTGCAACGTAA+AGG - chr7_2:10522841-10522860 None:intergenic 35.0%
! CACAATTGCAACGATTTTAG+AGG - chr7_2:10522907-10522926 None:intergenic 35.0%
!! CTCTAAAATCGTTGCAATTG+TGG + chr7_2:10522905-10522924 Msa1048710:three_prime_UTR 35.0%
CAATCTTTGATGTATTGCCT+TGG + chr7_2:10523023-10523042 Msa1048710:three_prime_UTR 35.0%
AAGTGATCATACACTGAGAG+AGG + chr7_2:10520797-10520816 Msa1048710:five_prime_UTR 40.0%
AGTGATCATACACTGAGAGA+GGG + chr7_2:10520798-10520817 Msa1048710:five_prime_UTR 40.0%
AGAGAGGGAGAAGAAGAAAA+AGG + chr7_2:10520813-10520832 Msa1048710:five_prime_UTR 40.0%
ACACCTTCTTTGTCACAACA+AGG - chr7_2:10520921-10520940 None:intergenic 40.0%
ATATCTTCTTCAGGAGTCCA+TGG - chr7_2:10520954-10520973 None:intergenic 40.0%
AAGAACATGGTCCTGGAAAT+TGG + chr7_2:10520994-10521013 Msa1048710:CDS 40.0%
ATGATCAACAACAGTCCTCT+TGG - chr7_2:10521154-10521173 None:intergenic 40.0%
GCAAAAGTTGCAGACTTAGA+TGG + chr7_2:10521322-10521341 Msa1048710:CDS 40.0%
!! AAGTTACCCCTTTTGATTCC+TGG - chr7_2:10521363-10521382 None:intergenic 40.0%
GCATCTCAAAGAATTCCAAG+AGG + chr7_2:10522096-10522115 Msa1048710:CDS 40.0%
! AGATTGACCTGGTTCTTTAG+TGG - chr7_2:10522250-10522269 None:intergenic 40.0%
GCATAGCAAAAAGATTGACC+TGG - chr7_2:10522261-10522280 None:intergenic 40.0%
! TGCTTCTAGTAGTGGAACAA+AGG + chr7_2:10522395-10522414 Msa1048710:CDS 40.0%
! GCTTCTAGTAGTGGAACAAA+GGG + chr7_2:10522396-10522415 Msa1048710:CDS 40.0%
!!! TTTTGAGCCTTTGGAGTCTT+TGG + chr7_2:10522455-10522474 Msa1048710:CDS 40.0%
GATGAAAGTAAGCCTGATGT+TGG + chr7_2:10522537-10522556 Msa1048710:CDS 40.0%
TGAAGCAAGTTGTCCTGAAA+AGG + chr7_2:10522605-10522624 Msa1048710:CDS 40.0%
! CCACAACCTAATACCTTTTC+AGG - chr7_2:10522621-10522640 None:intergenic 40.0%
!! CCTGAAAAGGTATTAGGTTG+TGG + chr7_2:10522618-10522637 Msa1048710:CDS 40.0%
!! GAAAAGGTATTAGGTTGTGG+TGG + chr7_2:10522621-10522640 Msa1048710:CDS 40.0%
! CATGCTCAAGTTTTCTAGAC+TGG + chr7_2:10522648-10522667 Msa1048710:exon 40.0%
ATACTAGCGAAGCTGAAATG+TGG + chr7_2:10522737-10522756 Msa1048710:three_prime_UTR 40.0%
! TTGTGATGATGTTGCTTGCT+TGG + chr7_2:10522760-10522779 Msa1048710:three_prime_UTR 40.0%
!! TGTTGCTTGCTTGGTTCTAA+TGG + chr7_2:10522769-10522788 Msa1048710:three_prime_UTR 40.0%
! CTTGTTTCTCTTCAGTACCA+AGG - chr7_2:10523043-10523062 None:intergenic 40.0%
AAGTGATCATACACTGAGAG+AGG + chr7_2:10520797-10520816 Msa1048710:five_prime_UTR 40.0%
AGTGATCATACACTGAGAGA+GGG + chr7_2:10520798-10520817 Msa1048710:five_prime_UTR 40.0%
AGAGAGGGAGAAGAAGAAAA+AGG + chr7_2:10520813-10520832 Msa1048710:five_prime_UTR 40.0%
ACACCTTCTTTGTCACAACA+AGG - chr7_2:10520921-10520940 None:intergenic 40.0%
ATATCTTCTTCAGGAGTCCA+TGG - chr7_2:10520954-10520973 None:intergenic 40.0%
AAGAACATGGTCCTGGAAAT+TGG + chr7_2:10520994-10521013 Msa1048710:CDS 40.0%
ATGATCAACAACAGTCCTCT+TGG - chr7_2:10521154-10521173 None:intergenic 40.0%
GCAAAAGTTGCAGACTTAGA+TGG + chr7_2:10521322-10521341 Msa1048710:CDS 40.0%
!! AAGTTACCCCTTTTGATTCC+TGG - chr7_2:10521363-10521382 None:intergenic 40.0%
GCATCTCAAAGAATTCCAAG+AGG + chr7_2:10522096-10522115 Msa1048710:CDS 40.0%
! AGATTGACCTGGTTCTTTAG+TGG - chr7_2:10522250-10522269 None:intergenic 40.0%
GCATAGCAAAAAGATTGACC+TGG - chr7_2:10522261-10522280 None:intergenic 40.0%
! TGCTTCTAGTAGTGGAACAA+AGG + chr7_2:10522395-10522414 Msa1048710:CDS 40.0%
! GCTTCTAGTAGTGGAACAAA+GGG + chr7_2:10522396-10522415 Msa1048710:CDS 40.0%
!!! TTTTGAGCCTTTGGAGTCTT+TGG + chr7_2:10522455-10522474 Msa1048710:CDS 40.0%
GATGAAAGTAAGCCTGATGT+TGG + chr7_2:10522537-10522556 Msa1048710:CDS 40.0%
TGAAGCAAGTTGTCCTGAAA+AGG + chr7_2:10522605-10522624 Msa1048710:CDS 40.0%
! CCACAACCTAATACCTTTTC+AGG - chr7_2:10522621-10522640 None:intergenic 40.0%
!! CCTGAAAAGGTATTAGGTTG+TGG + chr7_2:10522618-10522637 Msa1048710:CDS 40.0%
!! GAAAAGGTATTAGGTTGTGG+TGG + chr7_2:10522621-10522640 Msa1048710:CDS 40.0%
! CATGCTCAAGTTTTCTAGAC+TGG + chr7_2:10522648-10522667 Msa1048710:exon 40.0%
ATACTAGCGAAGCTGAAATG+TGG + chr7_2:10522737-10522756 Msa1048710:three_prime_UTR 40.0%
! TTGTGATGATGTTGCTTGCT+TGG + chr7_2:10522760-10522779 Msa1048710:three_prime_UTR 40.0%
!! TGTTGCTTGCTTGGTTCTAA+TGG + chr7_2:10522769-10522788 Msa1048710:three_prime_UTR 40.0%
! CTTGTTTCTCTTCAGTACCA+AGG - chr7_2:10523043-10523062 None:intergenic 40.0%
CCTTCTTTGTCACAACAAGG+TGG - chr7_2:10520918-10520937 None:intergenic 45.0%
! CCACCTTGTTGTGACAAAGA+AGG + chr7_2:10520915-10520934 Msa1048710:CDS 45.0%
AACATGGTCCTGGAAATTGG+AGG + chr7_2:10520997-10521016 Msa1048710:CDS 45.0%
ACATGGTCCTGGAAATTGGA+GGG + chr7_2:10520998-10521017 Msa1048710:CDS 45.0%
TGGACTAATTACCTAAGGCC+AGG + chr7_2:10521342-10521361 Msa1048710:CDS 45.0%
ACCTAAGGCCAGGAATCAAA+AGG + chr7_2:10521352-10521371 Msa1048710:CDS 45.0%
CCTAAGGCCAGGAATCAAAA+GGG + chr7_2:10521353-10521372 Msa1048710:CDS 45.0%
CTAAGGCCAGGAATCAAAAG+GGG + chr7_2:10521354-10521373 Msa1048710:CDS 45.0%
GGGTAACTTCACTGAACAAG+AGG + chr7_2:10521374-10521393 Msa1048710:CDS 45.0%
CTTCTTTCCCATTGACCTCT+TGG - chr7_2:10522114-10522133 None:intergenic 45.0%
GATGACTCCAAAGACTCCAA+AGG - chr7_2:10522465-10522484 None:intergenic 45.0%
ATCTTTGTCACCAGACGCAA+CGG + chr7_2:10522506-10522525 Msa1048710:CDS 45.0%
TCTTGTAAAACCGTTGCGTC+TGG - chr7_2:10522519-10522538 None:intergenic 45.0%
CCTTCTTTGTCACAACAAGG+TGG - chr7_2:10520918-10520937 None:intergenic 45.0%
! CCACCTTGTTGTGACAAAGA+AGG + chr7_2:10520915-10520934 Msa1048710:CDS 45.0%
AACATGGTCCTGGAAATTGG+AGG + chr7_2:10520997-10521016 Msa1048710:CDS 45.0%
ACATGGTCCTGGAAATTGGA+GGG + chr7_2:10520998-10521017 Msa1048710:CDS 45.0%
TGGACTAATTACCTAAGGCC+AGG + chr7_2:10521342-10521361 Msa1048710:CDS 45.0%
ACCTAAGGCCAGGAATCAAA+AGG + chr7_2:10521352-10521371 Msa1048710:CDS 45.0%
CCTAAGGCCAGGAATCAAAA+GGG + chr7_2:10521353-10521372 Msa1048710:CDS 45.0%
CTAAGGCCAGGAATCAAAAG+GGG + chr7_2:10521354-10521373 Msa1048710:CDS 45.0%
GGGTAACTTCACTGAACAAG+AGG + chr7_2:10521374-10521393 Msa1048710:CDS 45.0%
CTTCTTTCCCATTGACCTCT+TGG - chr7_2:10522114-10522133 None:intergenic 45.0%
GATGACTCCAAAGACTCCAA+AGG - chr7_2:10522465-10522484 None:intergenic 45.0%
ATCTTTGTCACCAGACGCAA+CGG + chr7_2:10522506-10522525 Msa1048710:CDS 45.0%
TCTTGTAAAACCGTTGCGTC+TGG - chr7_2:10522519-10522538 None:intergenic 45.0%
!! TTCATTAAAATTATATTTAT+TGG + chr7_2:10521075-10521094 Msa1048710:intron 5.0%
!!! AAATTTAATTTTACAAAAAT+TGG - chr7_2:10521608-10521627 None:intergenic 5.0%
!!! ATTTTTGTAAAATTAAATTT+AGG + chr7_2:10521608-10521627 Msa1048710:intron 5.0%
!! TTCATTAAAATTATATTTAT+TGG + chr7_2:10521075-10521094 Msa1048710:intron 5.0%
!!! AAATTTAATTTTACAAAAAT+TGG - chr7_2:10521608-10521627 None:intergenic 5.0%
!!! ATTTTTGTAAAATTAAATTT+AGG + chr7_2:10521608-10521627 Msa1048710:intron 5.0%
!! CCCTTTTGATTCCTGGCCTT+AGG - chr7_2:10521356-10521375 None:intergenic 50.0%
!! CCCTTTTGATTCCTGGCCTT+AGG - chr7_2:10521356-10521375 None:intergenic 50.0%
GGAACAGCCCTCCAATTTCC+AGG - chr7_2:10521008-10521027 None:intergenic 55.0%
AGGGCTGTTCCAACCAAGAC+AGG + chr7_2:10521017-10521036 Msa1048710:CDS 55.0%
GGAACAGCCCTCCAATTTCC+AGG - chr7_2:10521008-10521027 None:intergenic 55.0%
AGGGCTGTTCCAACCAAGAC+AGG + chr7_2:10521017-10521036 Msa1048710:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 10520756 10523141 10520756 ID=Msa1048710;Name=Msa1048710
chr7_2 mRNA 10520756 10523141 10520756 ID=Msa1048710-mRNA-1;Parent=Msa1048710;Name=Msa1048710-mRNA-1;_AED=0.00;_eAED=0.00;_QI=150|1|1|1|1|1|3|476|325
chr7_2 exon 10520756 10521038 10520756 ID=Msa1048710-mRNA-1:exon:2767;Parent=Msa1048710-mRNA-1
chr7_2 exon 10521307 10521436 10521307 ID=Msa1048710-mRNA-1:exon:2768;Parent=Msa1048710-mRNA-1
chr7_2 exon 10521951 10523141 10521951 ID=Msa1048710-mRNA-1:exon:2769;Parent=Msa1048710-mRNA-1
chr7_2 five_prime_UTR 10520756 10520905 10520756 ID=Msa1048710-mRNA-1:five_prime_utr;Parent=Msa1048710-mRNA-1
chr7_2 CDS 10520906 10521038 10520906 ID=Msa1048710-mRNA-1:cds;Parent=Msa1048710-mRNA-1
chr7_2 CDS 10521307 10521436 10521307 ID=Msa1048710-mRNA-1:cds;Parent=Msa1048710-mRNA-1
chr7_2 CDS 10521951 10522665 10521951 ID=Msa1048710-mRNA-1:cds;Parent=Msa1048710-mRNA-1
chr7_2 three_prime_UTR 10522666 10523141 10522666 ID=Msa1048710-mRNA-1:three_prime_utr;Parent=Msa1048710-mRNA-1
Gene Sequence

>Msa1048710

ATGGGAAGACCACCTTGTTGTGACAAAGAAGGTGTTAAAAAAGGACCATGGACTCCTGAAGAAGATATCATACTTGTTACTTATATACAAGAACATGGTCCTGGAAATTGGAGGGCTGTTCCAACCAAGACAGGGTTGTCAAGATGCAGCAAAAGTTGCAGACTTAGATGGACTAATTACCTAAGGCCAGGAATCAAAAGGGGTAACTTCACTGAACAAGAGGAGAAGATGATTATCCATCTTCAAGATCTTTTAGGAAATAGATGGGCTGCAATAGCATCATACCTTCCACAAAGAACAGATAATGACATAAAAAACTATTGGAATACTCATTTGAAAAAGAAGCTCAAGAAATCACAAACAGGTAATAATGCTGAATGCATTAATTTTGAAGAAGAAAAATTTTCAGCATCTCAAAGAATTCCAAGAGGTCAATGGGAAAGAAGACTTCAAACAGATATTCAAATGGCCAAAAAAGCACTTAATGAAGCACTTTCACCACAAAAATTATCTTCTAATTTTTCTACTTCAAACCCTACAAATAGTAACTCATTTTCTTCCACTAAAGAACCAGGTCAATCTTTTTGCTATGCTTCAAGTGCAGATAACATAGCTCGTTTACTAAAAGGTTGGATGAAAAATCCAATCAAATCATCGGTTAGTACTAATTCTGCTGTGACACAAAATTCCTTCAACAACTTTGATTCTGCTTCTAGTAGTGGAACAAAGGGTGAAATATTGTCTGAAACATTTGAATATTTGTTTGGTTTTGAGCCTTTGGAGTCTTTGGAGTCATCAAATTCTGAATTCTCTCGTCAATCTTTGTCACCAGACGCAACGGTTTTACAAGATGAAAGTAAGCCTGATGTTGGTTCAGAATCAATGCCCTTTTCTTTGCTTGAGAAATGGCTTCTTGATGAAGCAAGTTGTCCTGAAAAGGTATTAGGTTGTGGTGGTGATCATGCTCAAGTTTTCTAG
Protein sequence

>Msa1048710

MGRPPCCDKEGVKKGPWTPEEDIILVTYIQEHGPGNWRAVPTKTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKSQTGNNAECINFEEEKFSASQRIPRGQWERRLQTDIQMAKKALNEALSPQKLSSNFSTSNPTNSNSFSSTKEPGQSFCYASSADNIARLLKGWMKNPIKSSVSTNSAVTQNSFNNFDSASSSGTKGEILSETFEYLFGFEPLESLESSNSEFSRQSLSPDATVLQDESKPDVGSESMPFSLLEKWLLDEASCPEKVLGCGGDHAQVF*