Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133440 | XP_013469642.1 | 95.652 | 46 | 2 | 0 | 21 | 66 | 216 | 261 | 4.98e-21 | 94.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133440 | sp|Q6RVV4|TIC32_PEA | 89.130 | 46 | 5 | 0 | 21 | 66 | 217 | 262 | 3.37e-22 | 89.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133440 | A0A072W040 | 95.652 | 46 | 2 | 0 | 21 | 66 | 216 | 261 | 2.38e-21 | 94.4 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0133440 | 0.812737 | 3.646964e-51 | -8.615850e-47 |
| Msa0008850 | Msa0133440 | 0.826965 | 2.031030e-54 | -8.615850e-47 |
| Msa0011720 | Msa0133440 | 0.814261 | 1.685566e-51 | -8.615850e-47 |
| Msa0017120 | Msa0133440 | 0.815024 | 1.142281e-51 | -8.615850e-47 |
| Msa0020630 | Msa0133440 | 0.805486 | 1.304218e-49 | -8.615850e-47 |
| Msa0030000 | Msa0133440 | 0.831486 | 1.624561e-55 | -8.615850e-47 |
| Msa0038310 | Msa0133440 | 0.809031 | 2.313226e-50 | -8.615850e-47 |
| Msa0042220 | Msa0133440 | 0.803246 | 3.820976e-49 | -8.615850e-47 |
| Msa0044710 | Msa0133440 | 0.814250 | 1.695268e-51 | -8.615850e-47 |
| Msa0047470 | Msa0133440 | 0.825760 | 3.931523e-54 | -8.615850e-47 |
| Msa0055280 | Msa0133440 | 0.814124 | 1.807479e-51 | -8.615850e-47 |
| Msa0056040 | Msa0133440 | 0.801231 | 9.925281e-49 | -8.615850e-47 |
| Msa0060600 | Msa0133440 | 0.847688 | 9.873711e-60 | -8.615850e-47 |
| Msa0068410 | Msa0133440 | 0.800757 | 1.240834e-48 | -8.615850e-47 |
| Msa0074230 | Msa0133440 | 0.805895 | 1.070045e-49 | -8.615850e-47 |
| Msa0075310 | Msa0133440 | 0.803414 | 3.525662e-49 | -8.615850e-47 |
| Msa0079250 | Msa0133440 | 0.804705 | 1.900459e-49 | -8.615850e-47 |
| Msa0083160 | Msa0133440 | 0.816158 | 6.386971e-52 | -8.615850e-47 |
| Msa0084680 | Msa0133440 | 0.808584 | 2.883139e-50 | -8.615850e-47 |
| Msa0100250 | Msa0133440 | 0.801474 | 8.853473e-49 | -8.615850e-47 |
| Msa0101060 | Msa0133440 | 0.811155 | 8.064856e-51 | -8.615850e-47 |
| Msa0105340 | Msa0133440 | 0.827239 | 1.746149e-54 | -8.615850e-47 |
| Msa0114250 | Msa0133440 | 0.832103 | 1.144452e-55 | -8.615850e-47 |
| Msa0125230 | Msa0133440 | 0.813048 | 3.117708e-51 | -8.615850e-47 |
| Msa0133440 | Msa0135980 | 0.803065 | 4.163601e-49 | -8.615850e-47 |
| Msa0133440 | Msa0141550 | 0.808093 | 3.667790e-50 | -8.615850e-47 |
| Msa0133440 | Msa0141670 | 0.806957 | 6.391038e-50 | -8.615850e-47 |
| Msa0133440 | Msa0145950 | 0.805023 | 1.630254e-49 | -8.615850e-47 |
| Msa0133440 | Msa0146470 | 0.802072 | 6.672621e-49 | -8.615850e-47 |
| Msa0133440 | Msa0151690 | 0.812491 | 4.128049e-51 | -8.615850e-47 |
| Msa0133440 | Msa0159750 | 0.804148 | 2.482881e-49 | -8.615850e-47 |
| Msa0133440 | Msa0164360 | 0.803466 | 3.440010e-49 | -8.615850e-47 |
| Msa0133440 | Msa0168100 | 0.802750 | 4.837517e-49 | -8.615850e-47 |
| Msa0133440 | Msa0175530 | 0.833986 | 3.890756e-56 | -8.615850e-47 |
| Msa0133440 | Msa0182930 | 0.808109 | 3.640344e-50 | -8.615850e-47 |
| Msa0133440 | Msa0185390 | 0.827821 | 1.265726e-54 | -8.615850e-47 |
| Msa0133440 | Msa0207000 | 0.814146 | 1.787634e-51 | -8.615850e-47 |
| Msa0133440 | Msa0213080 | 0.816256 | 6.074908e-52 | -8.615850e-47 |
| Msa0133440 | Msa0223100 | 0.832775 | 7.798633e-56 | -8.615850e-47 |
| Msa0133440 | Msa0223290 | 0.833936 | 4.003646e-56 | -8.615850e-47 |
| Msa0133440 | Msa0223380 | 0.833648 | 4.726244e-56 | -8.615850e-47 |
| Msa0133440 | Msa0252180 | 0.831901 | 1.283608e-55 | -8.615850e-47 |
| Msa0133440 | Msa0253370 | 0.800993 | 1.110190e-48 | -8.615850e-47 |
| Msa0133440 | Msa0269360 | 0.800174 | 1.631059e-48 | -8.615850e-47 |
| Msa0133440 | Msa0282170 | 0.812728 | 3.663957e-51 | -8.615850e-47 |
| Msa0133440 | Msa0284870 | 0.828651 | 7.987782e-55 | -8.615850e-47 |
| Msa0133440 | Msa0288240 | 0.831422 | 1.684620e-55 | -8.615850e-47 |
| Msa0133440 | Msa0288330 | 0.809396 | 1.931941e-50 | -8.615850e-47 |
| Msa0133440 | Msa0292180 | 0.826966 | 2.029093e-54 | -8.615850e-47 |
| Msa0133440 | Msa0296610 | 0.811500 | 6.786313e-51 | -8.615850e-47 |
| Msa0133440 | Msa0296760 | 0.827335 | 1.655869e-54 | -8.615850e-47 |
| Msa0133440 | Msa0301180 | 0.809957 | 1.463187e-50 | -8.615850e-47 |
| Msa0133440 | Msa0302650 | 0.832059 | 1.173471e-55 | -8.615850e-47 |
| Msa0133440 | Msa0320540 | 0.801178 | 1.017755e-48 | -8.615850e-47 |
| Msa0133440 | Msa0323630 | 0.833271 | 5.868243e-56 | -8.615850e-47 |
| Msa0133440 | Msa0323640 | 0.804879 | 1.747635e-49 | -8.615850e-47 |
| Msa0133440 | Msa0326670 | 0.803952 | 2.726843e-49 | -8.615850e-47 |
| Msa0133440 | Msa0336270 | 0.832208 | 1.077564e-55 | -8.615850e-47 |
| Msa0133440 | Msa0344640 | 0.814086 | 1.842804e-51 | -8.615850e-47 |
| Msa0133440 | Msa0357380 | 0.821576 | 3.752709e-53 | -8.615850e-47 |
| Msa0133440 | Msa0357390 | 0.815687 | 8.138279e-52 | -8.615850e-47 |
| Msa0133440 | Msa0380040 | 0.814753 | 1.312311e-51 | -8.615850e-47 |
| Msa0133440 | Msa0411280 | 0.811050 | 8.498214e-51 | -8.615850e-47 |
| Msa0133440 | Msa0413740 | 0.811956 | 5.402062e-51 | -8.615850e-47 |
| Msa0133440 | Msa0421800 | 0.814382 | 1.584862e-51 | -8.615850e-47 |
| Msa0133440 | Msa0429290 | 0.800744 | 1.248448e-48 | -8.615850e-47 |
| Msa0133440 | Msa0431830 | 0.803018 | 4.258499e-49 | -8.615850e-47 |
| Msa0133440 | Msa0448080 | 0.842861 | 1.996324e-58 | -8.615850e-47 |
| Msa0133440 | Msa0458790 | 0.800319 | 1.524097e-48 | -8.615850e-47 |
| Msa0133440 | Msa0462590 | 0.813602 | 2.355982e-51 | -8.615850e-47 |
| Msa0133440 | Msa0469970 | 0.816292 | 5.962446e-52 | -8.615850e-47 |
| Msa0133440 | Msa0480320 | 0.803072 | 4.150586e-49 | -8.615850e-47 |
| Msa0133440 | Msa0484690 | 0.827001 | 1.991249e-54 | -8.615850e-47 |
| Msa0133440 | Msa0487910 | 0.820209 | 7.738812e-53 | -8.615850e-47 |
| Msa0133440 | Msa0490350 | 0.814332 | 1.625898e-51 | -8.615850e-47 |
| Msa0133440 | Msa0505390 | 0.814949 | 1.187449e-51 | -8.615850e-47 |
| Msa0133440 | Msa0508200 | 0.811916 | 5.509917e-51 | -8.615850e-47 |
| Msa0133440 | Msa0514260 | 0.811952 | 5.410653e-51 | -8.615850e-47 |
| Msa0133440 | Msa0524050 | 0.816499 | 5.358039e-52 | -8.615850e-47 |
| Msa0133440 | Msa0524090 | 0.813401 | 2.608458e-51 | -8.615850e-47 |
| Msa0133440 | Msa0524120 | 0.817690 | 2.893712e-52 | -8.615850e-47 |
| Msa0133440 | Msa0535030 | 0.806070 | 9.831236e-50 | -8.615850e-47 |
| Msa0133440 | Msa0535060 | 0.812294 | 4.558987e-51 | -8.615850e-47 |
| Msa0133440 | Msa0535450 | 0.809567 | 1.775210e-50 | -8.615850e-47 |
| Msa0133440 | Msa0540320 | 0.824855 | 6.435881e-54 | -8.615850e-47 |
| Msa0133440 | Msa0546380 | 0.806100 | 9.689493e-50 | -8.615850e-47 |
| Msa0133440 | Msa0546740 | 0.800734 | 1.254285e-48 | -8.615850e-47 |
| Msa0133440 | Msa0549740 | 0.803684 | 3.099528e-49 | -8.615850e-47 |
| Msa0133440 | Msa0557630 | 0.817632 | 2.981827e-52 | -8.615850e-47 |
| Msa0133440 | Msa0576420 | 0.815475 | 9.071341e-52 | -8.615850e-47 |
| Msa0133440 | Msa0576600 | 0.820763 | 5.774788e-53 | -8.615850e-47 |
| Msa0133440 | Msa0577230 | 0.804951 | 1.688195e-49 | -8.615850e-47 |
| Msa0133440 | Msa0579340 | 0.828570 | 8.354363e-55 | -8.615850e-47 |
| Msa0133440 | Msa0582110 | 0.825831 | 3.782688e-54 | -8.615850e-47 |
| Msa0133440 | Msa0587690 | 0.809890 | 1.513194e-50 | -8.615850e-47 |
| Msa0133440 | Msa0591770 | 0.810395 | 1.177275e-50 | -8.615850e-47 |
| Msa0133440 | Msa0596100 | 0.821449 | 4.012950e-53 | -8.615850e-47 |
| Msa0133440 | Msa0598250 | 0.831593 | 1.528452e-55 | -8.615850e-47 |
| Msa0133440 | Msa0606060 | 0.816245 | 6.107899e-52 | -8.615850e-47 |
| Msa0133440 | Msa0614230 | 0.808581 | 2.886331e-50 | -8.615850e-47 |
| Msa0133440 | Msa0617830 | 0.831052 | 2.077100e-55 | -8.615850e-47 |
| Msa0133440 | Msa0619330 | 0.819228 | 1.296959e-52 | -8.615850e-47 |
| Msa0133440 | Msa0620640 | 0.815071 | 1.115253e-51 | -8.615850e-47 |
| Msa0133440 | Msa0622340 | 0.805068 | 1.595654e-49 | -8.615850e-47 |
| Msa0133440 | Msa0624730 | 0.830314 | 3.148862e-55 | -8.615850e-47 |
| Msa0133440 | Msa0642650 | 0.811589 | 6.491324e-51 | -8.615850e-47 |
| Msa0133440 | Msa0647000 | 0.807411 | 5.121101e-50 | -8.615850e-47 |
| Msa0133440 | Msa0650650 | 0.818223 | 2.192475e-52 | -8.615850e-47 |
| Msa0133440 | Msa0650740 | 0.819955 | 8.848672e-53 | -8.615850e-47 |
| Msa0133440 | Msa0654060 | 0.806285 | 8.861404e-50 | -8.615850e-47 |
| Msa0133440 | Msa0656270 | 0.822141 | 2.776065e-53 | -8.615850e-47 |
| Msa0133440 | Msa0656680 | 0.829559 | 4.809341e-55 | -8.615850e-47 |
| Msa0133440 | Msa0663090 | 0.809818 | 1.567609e-50 | -8.615850e-47 |
| Msa0133440 | Msa0667220 | 0.826348 | 2.850213e-54 | -8.615850e-47 |
| Msa0133440 | Msa0669850 | 0.814151 | 1.782646e-51 | -8.615850e-47 |
| Msa0133440 | Msa0674220 | 0.827551 | 1.469989e-54 | -8.615850e-47 |
| Msa0133440 | Msa0674300 | 0.805212 | 1.488367e-49 | -8.615850e-47 |
| Msa0133440 | Msa0681890 | 0.812665 | 3.781499e-51 | -8.615850e-47 |
| Msa0133440 | Msa0686610 | 0.818366 | 2.035320e-52 | -8.615850e-47 |
| Msa0133440 | Msa0690350 | 0.802199 | 6.282114e-49 | -8.615850e-47 |
| Msa0133440 | Msa0694250 | 0.804958 | 1.682553e-49 | -8.615850e-47 |
| Msa0133440 | Msa0695370 | 0.804821 | 1.797241e-49 | -8.615850e-47 |
| Msa0133440 | Msa0700070 | 0.829122 | 6.141680e-55 | -8.615850e-47 |
| Msa0133440 | Msa0706370 | 0.823441 | 1.383115e-53 | -8.615850e-47 |
| Msa0133440 | Msa0707780 | 0.804091 | 2.551686e-49 | -8.615850e-47 |
| Msa0133440 | Msa0714600 | 0.813146 | 2.966188e-51 | -8.615850e-47 |
| Msa0133440 | Msa0719340 | 0.840027 | 1.113208e-57 | -8.615850e-47 |
| Msa0133440 | Msa0724050 | 0.833045 | 6.681472e-56 | -8.615850e-47 |
| Msa0133440 | Msa0733000 | 0.809416 | 1.913292e-50 | -8.615850e-47 |
| Msa0133440 | Msa0743640 | 0.847066 | 1.462905e-59 | -8.615850e-47 |
| Msa0133440 | Msa0750380 | 0.804391 | 2.209479e-49 | -8.615850e-47 |
| Msa0133440 | Msa0754860 | 0.801318 | 9.526530e-49 | -8.615850e-47 |
| Msa0133440 | Msa0763880 | 0.827843 | 1.250270e-54 | -8.615850e-47 |
| Msa0133440 | Msa0763910 | 0.810315 | 1.225112e-50 | -8.615850e-47 |
| Msa0133440 | Msa0772150 | 0.844161 | 8.974923e-59 | -8.615850e-47 |
| Msa0133440 | Msa0772210 | 0.800643 | 1.308743e-48 | -8.615850e-47 |
| Msa0133440 | Msa0787720 | 0.842975 | 1.861651e-58 | -8.615850e-47 |
| Msa0133440 | Msa0789270 | 0.826414 | 2.748298e-54 | -8.615850e-47 |
| Msa0133440 | Msa0789280 | 0.829136 | 6.092895e-55 | -8.615850e-47 |
| Msa0133440 | Msa0789290 | 0.823176 | 1.595061e-53 | -8.615850e-47 |
| Msa0133440 | Msa0789300 | 0.825093 | 5.655243e-54 | -8.615850e-47 |
| Msa0133440 | Msa0811510 | 0.819490 | 1.129981e-52 | -8.615850e-47 |
| Msa0133440 | Msa0812660 | 0.806754 | 7.054455e-50 | -8.615850e-47 |
| Msa0133440 | Msa0820670 | 0.827830 | 1.259446e-54 | -8.615850e-47 |
| Msa0133440 | Msa0824770 | 0.810617 | 1.054641e-50 | -8.615850e-47 |
| Msa0133440 | Msa0828570 | 0.807606 | 4.656099e-50 | -8.615850e-47 |
| Msa0133440 | Msa0830720 | 0.809476 | 1.856661e-50 | -8.615850e-47 |
| Msa0133440 | Msa0833940 | 0.807416 | 5.109679e-50 | -8.615850e-47 |
| Msa0133440 | Msa0847200 | 0.813608 | 2.347937e-51 | -8.615850e-47 |
| Msa0133440 | Msa0851740 | 0.820724 | 5.896073e-53 | -8.615850e-47 |
| Msa0133440 | Msa0863760 | 0.842173 | 3.039004e-58 | -8.615850e-47 |
| Msa0133440 | Msa0870620 | 0.802418 | 5.662918e-49 | -8.615850e-47 |
| Msa0133440 | Msa0890250 | 0.808910 | 2.455636e-50 | -8.615850e-47 |
| Msa0133440 | Msa0903730 | 0.814066 | 1.861870e-51 | -8.615850e-47 |
| Msa0133440 | Msa0907700 | 0.821714 | 3.486106e-53 | -8.615850e-47 |
| Msa0133440 | Msa0925160 | 0.808338 | 3.253731e-50 | -8.615850e-47 |
| Msa0133440 | Msa0934830 | 0.820634 | 6.184656e-53 | -8.615850e-47 |
| Msa0133440 | Msa0937940 | 0.800136 | 1.660234e-48 | -8.615850e-47 |
| Msa0133440 | Msa0950620 | 0.836267 | 1.034493e-56 | -8.615850e-47 |
| Msa0133440 | Msa0955260 | 0.805639 | 1.211285e-49 | -8.615850e-47 |
| Msa0133440 | Msa0964680 | 0.820265 | 7.514262e-53 | -8.615850e-47 |
| Msa0133440 | Msa0971860 | 0.846323 | 2.334931e-59 | -8.615850e-47 |
| Msa0133440 | Msa0973230 | 0.808149 | 3.569858e-50 | -8.615850e-47 |
| Msa0133440 | Msa1002040 | 0.813825 | 2.103824e-51 | -8.615850e-47 |
| Msa0133440 | Msa1015060 | 0.840297 | 9.464019e-58 | -8.615850e-47 |
| Msa0133440 | Msa1038320 | 0.841589 | 4.335022e-58 | -8.615850e-47 |
| Msa0133440 | Msa1043870 | 0.838761 | 2.372551e-57 | -8.615850e-47 |
| Msa0133440 | Msa1044040 | 0.845204 | 4.697217e-59 | -8.615850e-47 |
| Msa0133440 | Msa1056640 | 0.810745 | 9.891485e-51 | -8.615850e-47 |
| Msa0133440 | Msa1072350 | 0.803845 | 2.870375e-49 | -8.615850e-47 |
| Msa0133440 | Msa1087470 | 0.803402 | 3.546056e-49 | -8.615850e-47 |
| Msa0133440 | Msa1092820 | 0.808626 | 2.823679e-50 | -8.615850e-47 |
| Msa0133440 | Msa1097380 | 0.811717 | 6.089959e-51 | -8.615850e-47 |
| Msa0133440 | Msa1102540 | 0.813682 | 2.261815e-51 | -8.615850e-47 |
| Msa0133440 | Msa1113200 | 0.815852 | 7.474992e-52 | -8.615850e-47 |
| Msa0133440 | Msa1118140 | 0.815687 | 8.134916e-52 | -8.615850e-47 |
| Msa0133440 | Msa1122510 | 0.826308 | 2.912517e-54 | -8.615850e-47 |
| Msa0133440 | Msa1140010 | 0.808585 | 2.881106e-50 | -8.615850e-47 |
| Msa0133440 | Msa1159360 | 0.823860 | 1.103183e-53 | -8.615850e-47 |
| Msa0133440 | Msa1171340 | 0.800512 | 1.391880e-48 | -8.615850e-47 |
| Msa0133440 | Msa1184580 | 0.815588 | 8.562441e-52 | -8.615850e-47 |
| Msa0133440 | Msa1218650 | 0.813633 | 2.318309e-51 | -8.615850e-47 |
| Msa0133440 | Msa1220740 | 0.828966 | 6.700580e-55 | -8.615850e-47 |
| Msa0133440 | Msa1237030 | 0.809180 | 2.148780e-50 | -8.615850e-47 |
| Msa0133440 | Msa1254190 | 0.810778 | 9.734382e-51 | -8.615850e-47 |
| Msa0133440 | Msa1262310 | 0.820986 | 5.133358e-53 | -8.615850e-47 |
| Msa0133440 | Msa1280130 | 0.813205 | 2.879699e-51 | -8.615850e-47 |
| Msa0133440 | Msa1334650 | 0.822763 | 1.989913e-53 | -8.615850e-47 |
| Msa0133440 | Msa1335720 | 0.802731 | 4.881255e-49 | -8.615850e-47 |
| Msa0133440 | Msa1352290 | 0.808076 | 3.699280e-50 | -8.615850e-47 |
| Msa0133440 | Msa1367940 | 0.800234 | 1.586127e-48 | -8.615850e-47 |
| Msa0133440 | Msa1374440 | 0.827067 | 1.919727e-54 | -8.615850e-47 |
| Msa0133440 | Msa1381130 | 0.824728 | 6.897308e-54 | -8.615850e-47 |
| Msa0133440 | Msa1395570 | 0.818768 | 1.649471e-52 | -8.615850e-47 |
| Msa0133440 | Msa1408790 | 0.802289 | 6.021694e-49 | -8.615850e-47 |
| Msa0133440 | Msa1418200 | 0.835022 | 2.137122e-56 | -8.615850e-47 |
| Msa0133440 | Msa1419110 | 0.815021 | 1.144561e-51 | -8.615850e-47 |
| Msa0133440 | Msa1422270 | 0.818749 | 1.666487e-52 | -8.615850e-47 |
| Msa0133440 | Msa1428420 | 0.825632 | 4.216936e-54 | -8.615850e-47 |
| Msa0133440 | Msa1435470 | 0.804474 | 2.122837e-49 | -8.615850e-47 |
| Msa0133440 | Msa1436040 | 0.804234 | 2.382454e-49 | -8.615850e-47 |
| Msa0133440 | Msa1439230 | 0.821427 | 4.062112e-53 | -8.615850e-47 |
| Msa0133440 | Msa1440180 | 0.818040 | 2.411515e-52 | -8.615850e-47 |
| Msa0133440 | Msa1447560 | 0.806773 | 6.991414e-50 | -8.615850e-47 |
| Msa0133440 | Msa1449740 | 0.820664 | 6.087592e-53 | -8.615850e-47 |
| Msa0133440 | Msa1450020 | 0.803120 | 4.057072e-49 | -8.615850e-47 |
| Msa0133440 | Msa1456650 | 0.809753 | 1.619279e-50 | -8.615850e-47 |
| Msa0133440 | Msa1456810 | 0.836746 | 7.813054e-57 | -8.615850e-47 |
| Msa0133440 | Msa1458920 | 0.826540 | 2.565507e-54 | -8.615850e-47 |
| Msa0133440 | Msa1464560 | 0.848056 | 7.815824e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133440 | MtrunA17_Chr1g0202861 | 95.652 | 46 | 2 | 0 | 21 | 66 | 257 | 302 | 2.62e-24 | 92.8 |
| Msa0133440 | MtrunA17_Chr1g0202871 | 71.739 | 46 | 13 | 0 | 21 | 66 | 216 | 261 | 1.47e-18 | 77.0 |
| Msa0133440 | MtrunA17_Chr1g0202891 | 67.391 | 46 | 15 | 0 | 21 | 66 | 216 | 261 | 1.04e-15 | 69.3 |
| Msa0133440 | MtrunA17_Chr1g0202931 | 53.226 | 62 | 22 | 1 | 5 | 66 | 207 | 261 | 9.00e-15 | 66.6 |
| Msa0133440 | MtrunA17_Chr8g0386971 | 60.870 | 46 | 18 | 0 | 21 | 66 | 216 | 261 | 7.36e-14 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133440 | AT4G11410.1 | 52.000 | 50 | 24 | 0 | 17 | 66 | 212 | 261 | 8.69e-12 | 58.9 |
Find 19 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGAGAAATATACACTTTC+TGG | 0.171458 | 1_3:+64703030 | None:intergenic |
| AATGATAACTTCCTCCTTGC+AGG | 0.313945 | 1_3:+64703008 | None:intergenic |
| CTCCATCATGATCAGGAAGA+TGG | 0.437998 | 1_3:-64700463 | Msa0133440:intron |
| AGATTGGTGACAATTGTTCC+TGG | 0.444579 | 1_3:+64700412 | None:intergenic |
| CAGGTCTAATAAATGTGGTT+GGG | 0.491530 | 1_3:-64699922 | Msa0133440:CDS |
| TCCATCATGATCAGGAAGAT+GGG | 0.501810 | 1_3:-64700462 | Msa0133440:intron |
| GCAGGTCTAATAAATGTGGT+TGG | 0.514107 | 1_3:-64699923 | Msa0133440:intron |
| GTGGAACTGATCATTACCTA+AGG | 0.524690 | 1_3:-64698583 | None:intergenic |
| GTATTACCTTAAGTTTGTTG+TGG | 0.527357 | 1_3:-64698602 | Msa0133440:intron |
| ACTGCAAATTCTCTTCATCC+AGG | 0.546611 | 1_3:-64700430 | Msa0133440:CDS |
| CGTTCACTGCACTGTTATGT+CGG | 0.547282 | 1_3:+64700386 | None:intergenic |
| ACTGTTATGTCGGAAAAGAT+TGG | 0.564967 | 1_3:+64700396 | None:intergenic |
| TGTATATTTCTCAGCCTGCA+AGG | 0.609432 | 1_3:-64703022 | Msa0133440:CDS |
| TCATGATCAGGAAGATGGGG+TGG | 0.613846 | 1_3:-64700458 | Msa0133440:intron |
| CCATCATGATCAGGAAGATG+GGG | 0.633051 | 1_3:-64700461 | Msa0133440:intron |
| TTATGCAGGTCTAATAAATG+TGG | 0.639665 | 1_3:-64699927 | Msa0133440:intron |
| TGGAACTGATCATTACCTAA+GGG | 0.639678 | 1_3:-64698582 | None:intergenic |
| CGACATAACAGTGCAGTGAA+CGG | 0.644050 | 1_3:-64700385 | Msa0133440:intron |
| ATATTTCTCAGCCTGCAAGG+AGG | 0.774723 | 1_3:-64703019 | Msa0133440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAAAAAACCAATTTTAA+AGG | + | chr1_3:64701613-64701632 | None:intergenic | 10.0% |
| !! | TTAAATATTATTTAACCTAT+AGG | - | chr1_3:64702357-64702376 | Msa0133440:intron | 10.0% |
| !! | ATTATATGAAAAATGAATCT+TGG | - | chr1_3:64699223-64699242 | Msa0133440:intron | 15.0% |
| !!! | AGTGTATTATTTTTTTTGAT+AGG | + | chr1_3:64700101-64700120 | None:intergenic | 15.0% |
| !!! | AAAAAATACACTTTGATTTA+TGG | - | chr1_3:64700127-64700146 | Msa0133440:intron | 15.0% |
| !!! | TTTTTAAGGAAAAAAAATAG+TGG | - | chr1_3:64700233-64700252 | Msa0133440:intron | 15.0% |
| !!! | ACATTTCAAAGTTTAATTTA+GGG | + | chr1_3:64700340-64700359 | None:intergenic | 15.0% |
| !!! | AACATTTCAAAGTTTAATTT+AGG | + | chr1_3:64700341-64700360 | None:intergenic | 15.0% |
| !! | TGATAACTTATATTGAATTA+TGG | + | chr1_3:64700491-64700510 | None:intergenic | 15.0% |
| !! | AAAATGATGATAATACAAAT+TGG | + | chr1_3:64701017-64701036 | None:intergenic | 15.0% |
| !! | AATATAAACAATATTGTTAG+AGG | + | chr1_3:64702304-64702323 | None:intergenic | 15.0% |
| !! | CTAACAATATTGTTTATATT+AGG | - | chr1_3:64702304-64702323 | Msa0133440:intron | 15.0% |
| !! | TACTAAAAAAAACTTATACA+AGG | + | chr1_3:64702386-64702405 | None:intergenic | 15.0% |
| !!! | AATTTATTTTGGTTATTTGT+TGG | - | chr1_3:64702940-64702959 | Msa0133440:intron | 15.0% |
| !!! | ATTTATTTTGGTTATTTGTT+GGG | - | chr1_3:64702941-64702960 | Msa0133440:intron | 15.0% |
| !!! | ATACAGTTAGAATTATATTT+TGG | + | chr1_3:64703002-64703021 | None:intergenic | 15.0% |
| !! | TAGGTTTAAATCTTGAATTT+AGG | - | chr1_3:64699004-64699023 | Msa0133440:intron | 20.0% |
| !! | TTACGTATATTGTAAGATAA+TGG | + | chr1_3:64699190-64699209 | None:intergenic | 20.0% |
| !! | TTTATGCAAAACAACTTATT+AGG | + | chr1_3:64699346-64699365 | None:intergenic | 20.0% |
| !! | TTTATGCAAAACAACTTATT+AGG | + | chr1_3:64699346-64699365 | None:intergenic | 20.0% |
| !!! | CATTATTAGATTTTAATGGA+TGG | + | chr1_3:64700167-64700186 | None:intergenic | 20.0% |
| !! | CATCCATTAAAATCTAATAA+TGG | - | chr1_3:64700165-64700184 | Msa0133440:intron | 20.0% |
| !!! | CATCCATTATTAGATTTTAA+TGG | + | chr1_3:64700171-64700190 | None:intergenic | 20.0% |
| !!! | CATTAAAATCTAATAATGGA+TGG | - | chr1_3:64700169-64700188 | Msa0133440:intron | 20.0% |
| !!! | AAAAAAATAGTGGATTGTAA+TGG | - | chr1_3:64700243-64700262 | Msa0133440:intron | 20.0% |
| !!! | CATTTCAAAGTTTAATTTAG+GGG | + | chr1_3:64700339-64700358 | None:intergenic | 20.0% |
| !!! | GTTTTGGTTGATTAATAAAA+AGG | - | chr1_3:64700535-64700554 | Msa0133440:intron | 20.0% |
| !! | ATTAATTCTGATCATATCTT+TGG | - | chr1_3:64700979-64700998 | Msa0133440:intron | 20.0% |
| !!! | TTTTTCATTCTTGACTTTTT+GGG | - | chr1_3:64701047-64701066 | Msa0133440:intron | 20.0% |
| !! | ATATCAAAGATAGATTAATG+TGG | + | chr1_3:64701123-64701142 | None:intergenic | 20.0% |
| !! | TTATTCATGTAAATTCACTT+TGG | - | chr1_3:64701272-64701291 | Msa0133440:intron | 20.0% |
| !! | TATATTCTGTATTTAGTTGT+TGG | - | chr1_3:64701474-64701493 | Msa0133440:intron | 20.0% |
| !! | TTTAGTGCTATATATTACAA+TGG | + | chr1_3:64701563-64701582 | None:intergenic | 20.0% |
| !! | ACTAATACTTTATCTTTCAT+AGG | + | chr1_3:64701998-64702017 | None:intergenic | 20.0% |
| !!! | TACTCCAATTTTATTAATGT+AGG | - | chr1_3:64702439-64702458 | Msa0133440:intron | 20.0% |
| !!! | ACTCCAATTTTATTAATGTA+GGG | - | chr1_3:64702440-64702459 | Msa0133440:intron | 20.0% |
| !!! | AAATCTTTGATAATGACATA+TGG | - | chr1_3:64702748-64702767 | Msa0133440:intron | 20.0% |
| !! | AAAAATATGACAGAAAATAG+AGG | + | chr1_3:64702786-64702805 | None:intergenic | 20.0% |
| !! | CACATTAAATAAAACTAGTA+AGG | + | chr1_3:64702824-64702843 | None:intergenic | 20.0% |
| !! | AATTTATGTGTATGAATGTA+GGG | + | chr1_3:64702855-64702874 | None:intergenic | 20.0% |
| ! | TGTACTAAATTCTTCCATAA+GGG | + | chr1_3:64698702-64698721 | None:intergenic | 25.0% |
| ! | TTGTACTAAATTCTTCCATA+AGG | + | chr1_3:64698703-64698722 | None:intergenic | 25.0% |
| ! | GTTACTACTTTGGATATATA+GGG | + | chr1_3:64698773-64698792 | None:intergenic | 25.0% |
| ! | AGTTACTACTTTGGATATAT+AGG | + | chr1_3:64698774-64698793 | None:intergenic | 25.0% |
| ! | TTCATATCAAGTTACTACTT+TGG | + | chr1_3:64698783-64698802 | None:intergenic | 25.0% |
| ! | TAACTTGATATGAATAAGAC+AGG | - | chr1_3:64698789-64698808 | Msa0133440:intron | 25.0% |
| !!! | TATTCTTCTTTTTTCAAGTC+AGG | - | chr1_3:64698852-64698871 | Msa0133440:intron | 25.0% |
| !!! | ATTCTTCTTTTTTCAAGTCA+GGG | - | chr1_3:64698853-64698872 | Msa0133440:intron | 25.0% |
| ! | AGCATAAATCATAATCATTC+TGG | + | chr1_3:64698939-64698958 | None:intergenic | 25.0% |
| ! | GTTTCTTGAATGATATTGAA+TGG | - | chr1_3:64698963-64698982 | Msa0133440:intron | 25.0% |
| ! | TTGTGAAATTTATATCCAAC+TGG | - | chr1_3:64699027-64699046 | Msa0133440:intron | 25.0% |
| ! | CATATATCAAGTTACTACTT+TGG | + | chr1_3:64699079-64699098 | None:intergenic | 25.0% |
| ! | ACTTGATATATGAATAAGAC+AGG | - | chr1_3:64699087-64699106 | Msa0133440:intron | 25.0% |
| !! | ATACACTTTGATTTATGGAT+CGG | - | chr1_3:64700132-64700151 | Msa0133440:intron | 25.0% |
| !!! | AAATCTAATAATGGATGGAT+TGG | - | chr1_3:64700174-64700193 | Msa0133440:intron | 25.0% |
| ! | TTTATTCTAATTGGATGGAT+TGG | - | chr1_3:64700203-64700222 | Msa0133440:intron | 25.0% |
| ! | TACTTCTACTACATGTTATA+TGG | - | chr1_3:64700461-64700480 | Msa0133440:intron | 25.0% |
| ! | TTAATAAAAAGGATGTCCTT+AGG | - | chr1_3:64700546-64700565 | Msa0133440:intron | 25.0% |
| !! | TTTTATATACTCTACCAAAC+AGG | + | chr1_3:64700681-64700700 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+GGG | + | chr1_3:64700720-64700739 | None:intergenic | 25.0% |
| ! | AAATAAGCTGAAAACAACTT+AGG | + | chr1_3:64700721-64700740 | None:intergenic | 25.0% |
| ! | CTTATTTCCATAAACTCTAT+AGG | - | chr1_3:64700734-64700753 | Msa0133440:intron | 25.0% |
| ! | TGCTTATGAAAACAACTTAT+AGG | - | chr1_3:64700759-64700778 | Msa0133440:intron | 25.0% |
| !!! | CTTTTTCATTCTTGACTTTT+TGG | - | chr1_3:64701046-64701065 | Msa0133440:intron | 25.0% |
| ! | ATGTTGAATATGAATTATGC+AGG | - | chr1_3:64701296-64701315 | Msa0133440:intron | 25.0% |
| ! | AGAAAATGTACTCTACATAA+TGG | + | chr1_3:64701372-64701391 | None:intergenic | 25.0% |
| !! | TCCTTTACAATAACTTTTGA+TGG | - | chr1_3:64701413-64701432 | Msa0133440:intron | 25.0% |
| ! | TCCATCAAAAGTTATTGTAA+AGG | + | chr1_3:64701417-64701436 | None:intergenic | 25.0% |
| ! | CTAAAGCAAATAAGAGTTTA+TGG | + | chr1_3:64701450-64701469 | None:intergenic | 25.0% |
| !! | CATAAACTCTTATTTGCTTT+AGG | - | chr1_3:64701448-64701467 | Msa0133440:intron | 25.0% |
| !! | CAATGTTGTCAAATAGTTTT+TGG | - | chr1_3:64701790-64701809 | Msa0133440:intron | 25.0% |
| ! | TTATAATGCACGAATAATCT+CGG | - | chr1_3:64701844-64701863 | Msa0133440:intron | 25.0% |
| ! | TATTGCATTAACTTTGTGTA+CGG | - | chr1_3:64701867-64701886 | Msa0133440:intron | 25.0% |
| ! | TAACAACATTCTCTCTTATT+GGG | - | chr1_3:64701900-64701919 | Msa0133440:intron | 25.0% |
| !! | TCATATAGATCCCATTATTT+TGG | - | chr1_3:64701929-64701948 | Msa0133440:intron | 25.0% |
| !! | CATATAGATCCCATTATTTT+GGG | - | chr1_3:64701930-64701949 | Msa0133440:intron | 25.0% |
| ! | TCATAGGATAAAATTCATGT+AGG | + | chr1_3:64701982-64702001 | None:intergenic | 25.0% |
| ! | AAAATAGAGAAGCTTCAAAT+TGG | - | chr1_3:64702076-64702095 | Msa0133440:intron | 25.0% |
| ! | TTATATTAGGAGAAAACATG+TGG | - | chr1_3:64702317-64702336 | Msa0133440:intron | 25.0% |
| ! | ATAGATAGATAAATGTGACA+AGG | + | chr1_3:64702720-64702739 | None:intergenic | 25.0% |
| ! | GAATTTATGTGTATGAATGT+AGG | + | chr1_3:64702856-64702875 | None:intergenic | 25.0% |
| ! | TGAGCTTATAGTTAATGTTT+GGG | - | chr1_3:64702876-64702895 | Msa0133440:intron | 25.0% |
| !!! | CAGTTAGAATTATATTTTGG+AGG | + | chr1_3:64702999-64703018 | None:intergenic | 25.0% |
| !! | ATCATTGTTGAGTGTTTTAG+AGG | - | chr1_3:64698629-64698648 | Msa0133440:intron | 30.0% |
| ! | TGGATGGACTTTATTCTAAT+TGG | - | chr1_3:64700194-64700213 | Msa0133440:intron | 30.0% |
| TGGACTTTATTCTAATTGGA+TGG | - | chr1_3:64700198-64700217 | Msa0133440:intron | 30.0% | |
| !!! | GGATTGGATGGTTTTTTTTA+AGG | - | chr1_3:64700219-64700238 | Msa0133440:intron | 30.0% |
| ! | TTCAAAGTTTAATTTAGGGG+TGG | + | chr1_3:64700336-64700355 | None:intergenic | 30.0% |
| TTTATACAGTTACAGCAGAT+GGG | - | chr1_3:64700366-64700385 | Msa0133440:intron | 30.0% | |
| AAGCAATCCTATAGAGTTTA+TGG | + | chr1_3:64700744-64700763 | None:intergenic | 30.0% | |
| ATCATATAAGTGCGTATGTA+TGG | + | chr1_3:64700864-64700883 | None:intergenic | 30.0% | |
| GTACATAACAAGCAAAGTTA+AGG | + | chr1_3:64700935-64700954 | None:intergenic | 30.0% | |
| TGTGAGTAAATATGTCAGTT+TGG | - | chr1_3:64701092-64701111 | Msa0133440:intron | 30.0% | |
| AAATGTACTCTACATAATGG+TGG | + | chr1_3:64701369-64701388 | None:intergenic | 30.0% | |
| !! | TGAGTTTTATGAATGTTAGC+TGG | - | chr1_3:64701664-64701683 | Msa0133440:intron | 30.0% |
| TTATGCAGGTCTAATAAATG+TGG | - | chr1_3:64701693-64701712 | Msa0133440:intron | 30.0% | |
| AGTTAAATCAGTATGTCCTA+TGG | - | chr1_3:64701751-64701770 | Msa0133440:intron | 30.0% | |
| TCTCTGACATTTATAACCAT+AGG | + | chr1_3:64701770-64701789 | None:intergenic | 30.0% | |
| CTAACAACATTCTCTCTTAT+TGG | - | chr1_3:64701899-64701918 | Msa0133440:intron | 30.0% | |
| AATTAAAGTGGAAAACGTGA+TGG | + | chr1_3:64702030-64702049 | None:intergenic | 30.0% | |
| ! | TTTCATGATGGAATTGCATT+GGG | + | chr1_3:64702059-64702078 | None:intergenic | 30.0% |
| !! | TTTTCATGATGGAATTGCAT+TGG | + | chr1_3:64702060-64702079 | None:intergenic | 30.0% |
| ! | AAGCTTCTCTATTTTCATGA+TGG | + | chr1_3:64702071-64702090 | None:intergenic | 30.0% |
| ! | TCCTTATTCCAATTGTTGTT+GGG | - | chr1_3:64702189-64702208 | Msa0133440:intron | 30.0% |
| ACTTATACAAGGAATCCTAT+AGG | + | chr1_3:64702375-64702394 | None:intergenic | 30.0% | |
| GCTCCCTACATTAATAAAAT+TGG | + | chr1_3:64702446-64702465 | None:intergenic | 30.0% | |
| !! | TCTTTGATAATGACATATGG+TGG | - | chr1_3:64702751-64702770 | Msa0133440:intron | 30.0% |
| CTGAGCTTATAGTTAATGTT+TGG | - | chr1_3:64702875-64702894 | Msa0133440:intron | 30.0% | |
| GAGCTTATAGTTAATGTTTG+GGG | - | chr1_3:64702877-64702896 | Msa0133440:intron | 30.0% | |
| !! | GTATTACCTTAAGTTTGTTG+TGG | - | chr1_3:64703018-64703037 | Msa0133440:CDS | 30.0% |
| GCTGAGAAATATACACTTTC+TGG | + | chr1_3:64698593-64698612 | None:intergenic | 35.0% | |
| ! | CCATAAGGGTTTTACAATCT+AGG | + | chr1_3:64698688-64698707 | None:intergenic | 35.0% |
| CCTAGATTGTAAAACCCTTA+TGG | - | chr1_3:64698685-64698704 | Msa0133440:intron | 35.0% | |
| ATTTGATAAACCAGATGCTC+TGG | - | chr1_3:64698738-64698757 | Msa0133440:intron | 35.0% | |
| TTGAATGGCCTAATGAAGAA+TGG | - | chr1_3:64698978-64698997 | Msa0133440:intron | 35.0% | |
| TGAATGGCCTAATGAAGAAT+GGG | - | chr1_3:64698979-64698998 | Msa0133440:intron | 35.0% | |
| AGTTGGATATATTTGCCAGT+TGG | + | chr1_3:64699045-64699064 | None:intergenic | 35.0% | |
| AACTGGCAAATATATCCAAC+TGG | - | chr1_3:64699044-64699063 | Msa0133440:intron | 35.0% | |
| CTTTGGATATATTTGCCAGT+TGG | + | chr1_3:64699062-64699081 | None:intergenic | 35.0% | |
| ! | ACTTTGATTTATGGATCGGA+TGG | - | chr1_3:64700136-64700155 | Msa0133440:intron | 35.0% |
| !! | CTAATAATGGATGGATTGGA+TGG | - | chr1_3:64700178-64700197 | Msa0133440:intron | 35.0% |
| !! | TTCTAATTGGATGGATTGGA+TGG | - | chr1_3:64700207-64700226 | Msa0133440:intron | 35.0% |
| !! | AGTGGATTGTAATGGACTAA+TGG | - | chr1_3:64700251-64700270 | Msa0133440:intron | 35.0% |
| ! | CCTAATGGATGGATCAAAAA+AGG | + | chr1_3:64700278-64700297 | None:intergenic | 35.0% |
| !!! | CCTTTTTTGATCCATCCATT+AGG | - | chr1_3:64700275-64700294 | Msa0133440:intron | 35.0% |
| GATATGGATTTGGATCCTAA+TGG | + | chr1_3:64700293-64700312 | None:intergenic | 35.0% | |
| TTAATTTAGGGGTGGCAAAA+TGG | + | chr1_3:64700328-64700347 | None:intergenic | 35.0% | |
| TCTGCTGTAACTGTATAAAG+AGG | + | chr1_3:64700365-64700384 | None:intergenic | 35.0% | |
| CTTTATACAGTTACAGCAGA+TGG | - | chr1_3:64700365-64700384 | Msa0133440:intron | 35.0% | |
| TTATACAGTTACAGCAGATG+GGG | - | chr1_3:64700367-64700386 | Msa0133440:intron | 35.0% | |
| CCAAAACATTAAGACAAGTG+AGG | + | chr1_3:64700522-64700541 | None:intergenic | 35.0% | |
| ! | CCTCACTTGTCTTAATGTTT+TGG | - | chr1_3:64700519-64700538 | Msa0133440:intron | 35.0% |
| TAAAAAGGATGTCCTTAGGT+AGG | - | chr1_3:64700550-64700569 | Msa0133440:intron | 35.0% | |
| AAAGAACACATACCTACCTA+AGG | + | chr1_3:64700565-64700584 | None:intergenic | 35.0% | |
| AGTCAACTGATAAAAGCTCA+AGG | + | chr1_3:64700596-64700615 | None:intergenic | 35.0% | |
| !! | TTCATTCTTGACTTTTTGGG+TGG | - | chr1_3:64701050-64701069 | Msa0133440:intron | 35.0% |
| ATTACTTCTCCATCATGATC+AGG | - | chr1_3:64701150-64701169 | Msa0133440:intron | 35.0% | |
| ACTGTTATGTCGGAAAAGAT+TGG | + | chr1_3:64701227-64701246 | None:intergenic | 35.0% | |
| ATATGAATTATGCAGGTCAC+AGG | - | chr1_3:64701303-64701322 | Msa0133440:intron | 35.0% | |
| ATTACAATGGTCATTCTGAG+TGG | + | chr1_3:64701550-64701569 | None:intergenic | 35.0% | |
| !! | CACTCACAAGCCTTTAAAAT+TGG | - | chr1_3:64701600-64701619 | Msa0133440:intron | 35.0% |
| !!! | TTAGCTGGTTTGTTTTATGC+AGG | - | chr1_3:64701679-64701698 | Msa0133440:intron | 35.0% |
| CAGGTCTAATAAATGTGGTT+GGG | - | chr1_3:64701698-64701717 | Msa0133440:intron | 35.0% | |
| !! | TACTGATTTAACTTACCTGC+TGG | + | chr1_3:64701744-64701763 | None:intergenic | 35.0% |
| TAACTTTGTGTACGGAAAGA+AGG | - | chr1_3:64701875-64701894 | Msa0133440:intron | 35.0% | |
| AACTTTGTGTACGGAAAGAA+GGG | - | chr1_3:64701876-64701895 | Msa0133440:intron | 35.0% | |
| !!! | AGATCCCATTATTTTGGGAA+TGG | - | chr1_3:64701935-64701954 | Msa0133440:intron | 35.0% |
| GGATCCATTCCCAAAATAAT+GGG | + | chr1_3:64701942-64701961 | None:intergenic | 35.0% | |
| ! | TAGGTCTCACCATTTTATGT+GGG | + | chr1_3:64701963-64701982 | None:intergenic | 35.0% |
| ATTGGGAAGTGGAATTAAAG+TGG | + | chr1_3:64702042-64702061 | None:intergenic | 35.0% | |
| AAGCTTCAAATTGGAGAGTT+TGG | - | chr1_3:64702085-64702104 | Msa0133440:intron | 35.0% | |
| ! | AGTTTGGAAAAACGTGGTTT+TGG | - | chr1_3:64702101-64702120 | Msa0133440:intron | 35.0% |
| GTCCTTATTCCAATTGTTGT+TGG | - | chr1_3:64702188-64702207 | Msa0133440:intron | 35.0% | |
| ACCCAACAACAATTGGAATA+AGG | + | chr1_3:64702193-64702212 | None:intergenic | 35.0% | |
| ! | TGATTTGGCAAAGAAACTCT+GGG | - | chr1_3:64702571-64702590 | Msa0133440:intron | 35.0% |
| ! | TCATATTTTTCCCTCTGCAT+AGG | - | chr1_3:64702796-64702815 | Msa0133440:intron | 35.0% |
| !! | TTGGGGTTCATTTTTGTGAA+AGG | - | chr1_3:64702894-64702913 | Msa0133440:intron | 35.0% |
| TCAGTTCCACAACAAACTTA+AGG | + | chr1_3:64703027-64703046 | None:intergenic | 35.0% | |
| TGTATATTTCTCAGCCTGCA+AGG | - | chr1_3:64698598-64698617 | Msa0133440:intron | 40.0% | |
| AATGATAACTTCCTCCTTGC+AGG | + | chr1_3:64698615-64698634 | None:intergenic | 40.0% | |
| TCATAATCATTCTGGACCCA+TGG | + | chr1_3:64698931-64698950 | None:intergenic | 40.0% | |
| ACCTATGCCCATTCTTCATT+AGG | + | chr1_3:64698989-64699008 | None:intergenic | 40.0% | |
| CAAATGCAAGTCACAGATTG+TGG | + | chr1_3:64699135-64699154 | None:intergenic | 40.0% | |
| TGGATTTGGATCCTAATGGA+TGG | + | chr1_3:64700289-64700308 | None:intergenic | 40.0% | |
| GGATTGGATGGATATGGATT+TGG | + | chr1_3:64700303-64700322 | None:intergenic | 40.0% | |
| !! | ATGGATGGATTGGATGGATA+TGG | + | chr1_3:64700309-64700328 | None:intergenic | 40.0% |
| !!! | GAGGTGTTTTGTAAGTTGGT+TGG | + | chr1_3:64700431-64700450 | None:intergenic | 40.0% |
| !! | CCTTGAGGTGTTTTGTAAGT+TGG | + | chr1_3:64700435-64700454 | None:intergenic | 40.0% |
| CCAACTTACAAAACACCTCA+AGG | - | chr1_3:64700432-64700451 | Msa0133440:CDS | 40.0% | |
| GTAGAAGTAAGCATACCTTG+AGG | + | chr1_3:64700450-64700469 | None:intergenic | 40.0% | |
| AGACTATAGCATGACCTCTT+TGG | - | chr1_3:64700647-64700666 | Msa0133440:intron | 40.0% | |
| TCCATCATGATCAGGAAGAT+GGG | - | chr1_3:64701158-64701177 | Msa0133440:intron | 40.0% | |
| ACTGCAAATTCTCTTCATCC+AGG | - | chr1_3:64701190-64701209 | Msa0133440:intron | 40.0% | |
| ! | AGATTGGTGACAATTGTTCC+TGG | + | chr1_3:64701211-64701230 | None:intergenic | 40.0% |
| ATTATGCAGGTCACAGGATT+TGG | - | chr1_3:64701309-64701328 | Msa0133440:intron | 40.0% | |
| GCAGGTCTAATAAATGTGGT+TGG | - | chr1_3:64701697-64701716 | Msa0133440:intron | 40.0% | |
| TGTGATGAAAAATGTCCAGC+AGG | - | chr1_3:64701726-64701745 | Msa0133440:intron | 40.0% | |
| GGGATCCATTCCCAAAATAA+TGG | + | chr1_3:64701943-64701962 | None:intergenic | 40.0% | |
| GGAATGGATCCCACATAAAA+TGG | - | chr1_3:64701951-64701970 | Msa0133440:intron | 40.0% | |
| ! | GTAGGTCTCACCATTTTATG+TGG | + | chr1_3:64701964-64701983 | None:intergenic | 40.0% |
| TTGGAGAGTTTGGAAAAACG+TGG | - | chr1_3:64702095-64702114 | Msa0133440:intron | 40.0% | |
| !!! | TTGGAAAAACGTGGTTTTGG+TGG | - | chr1_3:64702104-64702123 | Msa0133440:intron | 40.0% |
| !!! | TGGAAAAACGTGGTTTTGGT+GGG | - | chr1_3:64702105-64702124 | Msa0133440:intron | 40.0% |
| TAAGTGCCTGTTTGTCATCA+CGG | + | chr1_3:64702137-64702156 | None:intergenic | 40.0% | |
| ! | TGCGATTCTCTTTGTTGTGA+GGG | + | chr1_3:64702233-64702252 | None:intergenic | 40.0% |
| !! | CTGATTTGGCAAAGAAACTC+TGG | - | chr1_3:64702570-64702589 | Msa0133440:intron | 40.0% |
| CTGGGATTTCAGCATCAATT+TGG | - | chr1_3:64702589-64702608 | Msa0133440:intron | 40.0% | |
| !! | TAGCATTGACGAGTAACACT+TGG | + | chr1_3:64702634-64702653 | None:intergenic | 40.0% |
| TAGTAAGGATCCTATGCAGA+GGG | + | chr1_3:64702809-64702828 | None:intergenic | 40.0% | |
| ! | TGTTGGGTGTTTGAGAGTTT+TGG | - | chr1_3:64702957-64702976 | Msa0133440:intron | 40.0% |
| ! | GTTGGGTGTTTGAGAGTTTT+GGG | - | chr1_3:64702958-64702977 | Msa0133440:intron | 40.0% |
| ATATTTCTCAGCCTGCAAGG+AGG | - | chr1_3:64698601-64698620 | Msa0133440:intron | 45.0% | |
| !! | GTTTTCTGTTCCAGAGCATC+TGG | + | chr1_3:64698751-64698770 | None:intergenic | 45.0% |
| ACTGTGTAGAACCTTGACCA+TGG | - | chr1_3:64698911-64698930 | Msa0133440:intron | 45.0% | |
| CTGTGTAGAACCTTGACCAT+GGG | - | chr1_3:64698912-64698931 | Msa0133440:intron | 45.0% | |
| GCCTAATGAAGAATGGGCAT+AGG | - | chr1_3:64698985-64699004 | Msa0133440:intron | 45.0% | |
| !! | GGCAAAATGGATGGATTGGA+TGG | + | chr1_3:64700315-64700334 | None:intergenic | 45.0% |
| TTTAGGGGTGGCAAAATGGA+TGG | + | chr1_3:64700324-64700343 | None:intergenic | 45.0% | |
| !! | GCATGACCTCTTTGGCTTTA+CGG | - | chr1_3:64700655-64700674 | Msa0133440:intron | 45.0% |
| CTCCATCATGATCAGGAAGA+TGG | - | chr1_3:64701157-64701176 | Msa0133440:intron | 45.0% | |
| CCATCATGATCAGGAAGATG+GGG | - | chr1_3:64701159-64701178 | Msa0133440:intron | 45.0% | |
| CGTTCACTGCACTGTTATGT+CGG | + | chr1_3:64701237-64701256 | None:intergenic | 45.0% | |
| CGACATAACAGTGCAGTGAA+CGG | - | chr1_3:64701235-64701254 | Msa0133440:intron | 45.0% | |
| TGGTCATTCTGAGTGGTCAT+TGG | + | chr1_3:64701543-64701562 | None:intergenic | 45.0% | |
| GATGGAATTGCATTGGGAAG+TGG | + | chr1_3:64702053-64702072 | None:intergenic | 45.0% | |
| TATCCACCGTGATGACAAAC+AGG | - | chr1_3:64702128-64702147 | Msa0133440:intron | 45.0% | |
| ! | CCAATTGTTGTTGGGTCTAG+CGG | - | chr1_3:64702197-64702216 | Msa0133440:intron | 45.0% |
| ! | CTGCGATTCTCTTTGTTGTG+AGG | + | chr1_3:64702234-64702253 | None:intergenic | 45.0% |
| CACTAACTCCCTTCACTTGT+GGG | + | chr1_3:64702496-64702515 | None:intergenic | 45.0% | |
| GTGTACAAAACAACCCCACA+TGG | - | chr1_3:64702539-64702558 | Msa0133440:intron | 45.0% | |
| ACAAAACAACCCCACATGGA+AGG | - | chr1_3:64702543-64702562 | Msa0133440:intron | 45.0% | |
| CAAAACAACCCCACATGGAA+GGG | - | chr1_3:64702544-64702563 | Msa0133440:intron | 45.0% | |
| CTAGTAAGGATCCTATGCAG+AGG | + | chr1_3:64702810-64702829 | None:intergenic | 45.0% | |
| !!! | ATAATATTTAAGTTTTTTTT+AGG | + | chr1_3:64702348-64702367 | None:intergenic | 5.0% |
| !!! | TAAACAATTAAAATTTATTT+TGG | - | chr1_3:64702929-64702948 | Msa0133440:intron | 5.0% |
| TCATTCTGGACCCATGGTCA+AGG | + | chr1_3:64698925-64698944 | None:intergenic | 50.0% | |
| GGGTGGCAAAATGGATGGAT+TGG | + | chr1_3:64700319-64700338 | None:intergenic | 50.0% | |
| TACAGCAGATGGGGTGCATA+TGG | - | chr1_3:64700376-64700395 | Msa0133440:intron | 50.0% | |
| AACAGGCCGTAAAGCCAAAG+AGG | + | chr1_3:64700664-64700683 | None:intergenic | 50.0% | |
| !! | CTTTGGCTTTACGGCCTGTT+TGG | - | chr1_3:64700664-64700683 | Msa0133440:intron | 50.0% |
| CCCCATCTTCCTGATCATGA+TGG | + | chr1_3:64701162-64701181 | None:intergenic | 50.0% | |
| TCATGATCAGGAAGATGGGG+TGG | - | chr1_3:64701162-64701181 | Msa0133440:intron | 50.0% | |
| CCGCTAGACCCAACAACAAT+TGG | + | chr1_3:64702200-64702219 | None:intergenic | 50.0% | |
| AGCATTGCACCCACAAGTGA+AGG | - | chr1_3:64702484-64702503 | Msa0133440:intron | 50.0% | |
| GCATTGCACCCACAAGTGAA+GGG | - | chr1_3:64702485-64702504 | Msa0133440:intron | 50.0% | |
| CCACTAACTCCCTTCACTTG+TGG | + | chr1_3:64702497-64702516 | None:intergenic | 50.0% | |
| CCACAAGTGAAGGGAGTTAG+TGG | - | chr1_3:64702494-64702513 | Msa0133440:intron | 50.0% | |
| AATCAGCGTCCCTTCCATGT+GGG | + | chr1_3:64702556-64702575 | None:intergenic | 50.0% | |
| AAATCAGCGTCCCTTCCATG+TGG | + | chr1_3:64702557-64702576 | None:intergenic | 50.0% | |
| ! | ACATGGAAGGGACGCTGATT+TGG | - | chr1_3:64702556-64702575 | Msa0133440:intron | 50.0% |
| GTGCCTGTTTGTCATCACGG+TGG | + | chr1_3:64702134-64702153 | None:intergenic | 55.0% | |
| ATCAGCGTCCCTTCCATGTG+GGG | + | chr1_3:64702555-64702574 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 64698585 | 64703057 | 64698585 | ID=Msa0133440;Name=Msa0133440 |
| chr1_3 | mRNA | 64698585 | 64703057 | 64698585 | ID=Msa0133440-mRNA-1;Parent=Msa0133440;Name=Msa0133440-mRNA-1;_AED=0.70;_eAED=0.70;_QI=0|0.33|0.5|0.5|1|1|4|0|74 |
| chr1_3 | exon | 64702992 | 64703057 | 64702992 | ID=Msa0133440-mRNA-1:exon:21880;Parent=Msa0133440-mRNA-1 |
| chr1_3 | exon | 64700386 | 64700470 | 64700386 | ID=Msa0133440-mRNA-1:exon:21879;Parent=Msa0133440-mRNA-1 |
| chr1_3 | exon | 64699895 | 64699941 | 64699895 | ID=Msa0133440-mRNA-1:exon:21878;Parent=Msa0133440-mRNA-1 |
| chr1_3 | exon | 64698585 | 64698611 | 64698585 | ID=Msa0133440-mRNA-1:exon:21877;Parent=Msa0133440-mRNA-1 |
| chr1_3 | CDS | 64702992 | 64703057 | 64702992 | ID=Msa0133440-mRNA-1:cds;Parent=Msa0133440-mRNA-1 |
| chr1_3 | CDS | 64700386 | 64700470 | 64700386 | ID=Msa0133440-mRNA-1:cds;Parent=Msa0133440-mRNA-1 |
| chr1_3 | CDS | 64699895 | 64699941 | 64699895 | ID=Msa0133440-mRNA-1:cds;Parent=Msa0133440-mRNA-1 |
| chr1_3 | CDS | 64698585 | 64698611 | 64698585 | ID=Msa0133440-mRNA-1:cds;Parent=Msa0133440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
