Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680370 | XP_003606114.1 | 89.813 | 589 | 40 | 1 | 1 | 569 | 1 | 589 | 0.0 | 1004 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680370 | sp|F4HW17|TMN5_ARATH | 50.514 | 584 | 262 | 5 | 8 | 569 | 11 | 589 | 0.0 | 598 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680370 | G7JIE2 | 89.813 | 589 | 40 | 1 | 1 | 569 | 1 | 589 | 0.0 | 1004 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011060 | Msa0680370 | -0.818536 | 1.862442e-52 | -8.615850e-47 |
| Msa0011100 | Msa0680370 | -0.818210 | 2.207301e-52 | -8.615850e-47 |
| Msa0013270 | Msa0680370 | 0.803084 | 4.127696e-49 | -8.615850e-47 |
| Msa0016380 | Msa0680370 | -0.820292 | 7.409257e-53 | -8.615850e-47 |
| Msa0017710 | Msa0680370 | 0.828159 | 1.049938e-54 | -8.615850e-47 |
| Msa0039750 | Msa0680370 | 0.807075 | 6.033584e-50 | -8.615850e-47 |
| Msa0044530 | Msa0680370 | -0.817060 | 4.010576e-52 | -8.615850e-47 |
| Msa0044780 | Msa0680370 | -0.804034 | 2.622370e-49 | -8.615850e-47 |
| Msa0045620 | Msa0680370 | 0.805077 | 1.588678e-49 | -8.615850e-47 |
| Msa0048410 | Msa0680370 | -0.818683 | 1.724762e-52 | -8.615850e-47 |
| Msa0073110 | Msa0680370 | 0.802934 | 4.431889e-49 | -8.615850e-47 |
| Msa0078160 | Msa0680370 | -0.800918 | 1.150127e-48 | -8.615850e-47 |
| Msa0086620 | Msa0680370 | -0.808308 | 3.301026e-50 | -8.615850e-47 |
| Msa0089470 | Msa0680370 | -0.829145 | 6.064820e-55 | -8.615850e-47 |
| Msa0089540 | Msa0680370 | 0.808841 | 2.540323e-50 | -8.615850e-47 |
| Msa0091220 | Msa0680370 | -0.817362 | 3.429456e-52 | -8.615850e-47 |
| Msa0091240 | Msa0680370 | -0.810680 | 1.022068e-50 | -8.615850e-47 |
| Msa0094900 | Msa0680370 | -0.807811 | 4.211492e-50 | -8.615850e-47 |
| Msa0108500 | Msa0680370 | -0.810129 | 1.343631e-50 | -8.615850e-47 |
| Msa0120320 | Msa0680370 | -0.813291 | 2.757812e-51 | -8.615850e-47 |
| Msa0608940 | Msa0680370 | -0.822245 | 2.625865e-53 | -8.615850e-47 |
| Msa0612880 | Msa0680370 | -0.816337 | 5.826226e-52 | -8.615850e-47 |
| Msa0619300 | Msa0680370 | 0.800837 | 1.194939e-48 | -8.615850e-47 |
| Msa0623310 | Msa0680370 | 0.811893 | 5.574425e-51 | -8.615850e-47 |
| Msa0624930 | Msa0680370 | 0.808168 | 3.535427e-50 | -8.615850e-47 |
| Msa0625900 | Msa0680370 | -0.801502 | 8.736003e-49 | -8.615850e-47 |
| Msa0634900 | Msa0680370 | -0.805520 | 1.283247e-49 | -8.615850e-47 |
| Msa0641700 | Msa0680370 | 0.802119 | 6.527099e-49 | -8.615850e-47 |
| Msa0646230 | Msa0680370 | 0.801391 | 9.204936e-49 | -8.615850e-47 |
| Msa0659020 | Msa0680370 | -0.844977 | 5.410487e-59 | -8.615850e-47 |
| Msa0661480 | Msa0680370 | 0.816913 | 4.328149e-52 | -8.615850e-47 |
| Msa0663580 | Msa0680370 | -0.803418 | 3.519974e-49 | -8.615850e-47 |
| Msa0663690 | Msa0680370 | -0.803662 | 3.132376e-49 | -8.615850e-47 |
| Msa0673940 | Msa0680370 | 0.826284 | 2.952124e-54 | -8.615850e-47 |
| Msa0680370 | Msa0680450 | 0.982384 | 5.929313e-155 | -8.615850e-47 |
| Msa0680370 | Msa0685390 | -0.808200 | 3.481239e-50 | -8.615850e-47 |
| Msa0680370 | Msa0691740 | -0.818427 | 1.971820e-52 | -8.615850e-47 |
| Msa0680370 | Msa0698110 | 0.808696 | 2.727922e-50 | -8.615850e-47 |
| Msa0680370 | Msa0702970 | 0.800743 | 1.249199e-48 | -8.615850e-47 |
| Msa0680370 | Msa0704690 | 0.823687 | 1.210982e-53 | -8.615850e-47 |
| Msa0680370 | Msa0705130 | -0.811979 | 5.337865e-51 | -8.615850e-47 |
| Msa0680370 | Msa0708020 | 0.800401 | 1.466234e-48 | -8.615850e-47 |
| Msa0680370 | Msa0715350 | 0.813228 | 2.846943e-51 | -8.615850e-47 |
| Msa0680370 | Msa0730250 | -0.803583 | 3.253487e-49 | -8.615850e-47 |
| Msa0680370 | Msa0732970 | 0.831803 | 1.356740e-55 | -8.615850e-47 |
| Msa0680370 | Msa0733240 | -0.831564 | 1.554153e-55 | -8.615850e-47 |
| Msa0680370 | Msa0756440 | -0.804981 | 1.664176e-49 | -8.615850e-47 |
| Msa0680370 | Msa0761830 | 0.820923 | 5.306199e-53 | -8.615850e-47 |
| Msa0680370 | Msa0770540 | -0.802974 | 4.348423e-49 | -8.615850e-47 |
| Msa0680370 | Msa0773960 | 0.832063 | 1.170648e-55 | -8.615850e-47 |
| Msa0680370 | Msa0774360 | -0.829595 | 4.713298e-55 | -8.615850e-47 |
| Msa0680370 | Msa0776590 | -0.803324 | 3.679991e-49 | -8.615850e-47 |
| Msa0680370 | Msa0792410 | 0.809586 | 1.758473e-50 | -8.615850e-47 |
| Msa0680370 | Msa0804170 | 0.812415 | 4.289927e-51 | -8.615850e-47 |
| Msa0680370 | Msa0812020 | -0.836776 | 7.676191e-57 | -8.615850e-47 |
| Msa0680370 | Msa0813630 | -0.804182 | 2.442137e-49 | -8.615850e-47 |
| Msa0680370 | Msa0841050 | 0.801173 | 1.020238e-48 | -8.615850e-47 |
| Msa0680370 | Msa0842180 | 0.844040 | 9.669389e-59 | -8.615850e-47 |
| Msa0680370 | Msa0848670 | -0.803199 | 3.907700e-49 | -8.615850e-47 |
| Msa0680370 | Msa0852090 | -0.835331 | 1.785737e-56 | -8.615850e-47 |
| Msa0680370 | Msa0866510 | -0.802261 | 6.099912e-49 | -8.615850e-47 |
| Msa0680370 | Msa0870020 | 0.802446 | 5.587686e-49 | -8.615850e-47 |
| Msa0680370 | Msa0871420 | 0.836834 | 7.418271e-57 | -8.615850e-47 |
| Msa0680370 | Msa0906100 | -0.812401 | 4.319518e-51 | -8.615850e-47 |
| Msa0680370 | Msa0925630 | -0.805180 | 1.512051e-49 | -8.615850e-47 |
| Msa0680370 | Msa0936630 | 0.823766 | 1.160728e-53 | -8.615850e-47 |
| Msa0680370 | Msa0938150 | -0.818480 | 1.918106e-52 | -8.615850e-47 |
| Msa0680370 | Msa0941150 | -0.807398 | 5.154746e-50 | -8.615850e-47 |
| Msa0680370 | Msa0967900 | -0.824295 | 8.719899e-54 | -8.615850e-47 |
| Msa0680370 | Msa1026710 | 0.835161 | 1.971244e-56 | -8.615850e-47 |
| Msa0680370 | Msa1031530 | -0.808569 | 2.904143e-50 | -8.615850e-47 |
| Msa0680370 | Msa1042300 | 0.811362 | 7.273022e-51 | -8.615850e-47 |
| Msa0680370 | Msa1070630 | -0.830057 | 3.637452e-55 | -8.615850e-47 |
| Msa0680370 | Msa1078210 | -0.800211 | 1.602957e-48 | -8.615850e-47 |
| Msa0680370 | Msa1078590 | -0.811051 | 8.492980e-51 | -8.615850e-47 |
| Msa0680370 | Msa1078760 | -0.803870 | 2.836128e-49 | -8.615850e-47 |
| Msa0680370 | Msa1088740 | -0.824517 | 7.731868e-54 | -8.615850e-47 |
| Msa0680370 | Msa1093190 | -0.827631 | 1.406580e-54 | -8.615850e-47 |
| Msa0680370 | Msa1127200 | 0.800780 | 1.227131e-48 | -8.615850e-47 |
| Msa0680370 | Msa1129660 | -0.841216 | 5.434273e-58 | -8.615850e-47 |
| Msa0680370 | Msa1130770 | 0.833008 | 6.823386e-56 | -8.615850e-47 |
| Msa0680370 | Msa1133440 | -0.817899 | 2.595657e-52 | -8.615850e-47 |
| Msa0680370 | Msa1136770 | -0.803754 | 2.997935e-49 | -8.615850e-47 |
| Msa0680370 | Msa1158450 | -0.825789 | 3.869892e-54 | -8.615850e-47 |
| Msa0680370 | Msa1186670 | 0.811162 | 8.035929e-51 | -8.615850e-47 |
| Msa0680370 | Msa1190350 | -0.821395 | 4.130554e-53 | -8.615850e-47 |
| Msa0680370 | Msa1205270 | -0.805515 | 1.286373e-49 | -8.615850e-47 |
| Msa0680370 | Msa1217890 | 0.816877 | 4.408234e-52 | -8.615850e-47 |
| Msa0680370 | Msa1220580 | 0.817841 | 2.675037e-52 | -8.615850e-47 |
| Msa0680370 | Msa1220720 | 0.808302 | 3.310507e-50 | -8.615850e-47 |
| Msa0680370 | Msa1223540 | 0.810040 | 1.404742e-50 | -8.615850e-47 |
| Msa0680370 | Msa1223620 | 0.807469 | 4.978976e-50 | -8.615850e-47 |
| Msa0680370 | Msa1228600 | -0.802071 | 6.674968e-49 | -8.615850e-47 |
| Msa0680370 | Msa1240240 | -0.800704 | 1.272311e-48 | -8.615850e-47 |
| Msa0680370 | Msa1255710 | 0.802546 | 5.331004e-49 | -8.615850e-47 |
| Msa0680370 | Msa1263520 | 0.806123 | 9.583117e-50 | -8.615850e-47 |
| Msa0680370 | Msa1265570 | 0.802706 | 4.940233e-49 | -8.615850e-47 |
| Msa0680370 | Msa1266120 | -0.836078 | 1.155296e-56 | -8.615850e-47 |
| Msa0680370 | Msa1273320 | 0.811109 | 8.252144e-51 | -8.615850e-47 |
| Msa0680370 | Msa1286860 | -0.835371 | 1.744246e-56 | -8.615850e-47 |
| Msa0680370 | Msa1286950 | -0.804476 | 2.121519e-49 | -8.615850e-47 |
| Msa0680370 | Msa1295210 | -0.816001 | 6.924345e-52 | -8.615850e-47 |
| Msa0680370 | Msa1297220 | -0.810580 | 1.073954e-50 | -8.615850e-47 |
| Msa0680370 | Msa1302630 | 0.802291 | 6.014163e-49 | -8.615850e-47 |
| Msa0680370 | Msa1320660 | -0.831135 | 1.982191e-55 | -8.615850e-47 |
| Msa0680370 | Msa1323260 | -0.824742 | 6.846635e-54 | -8.615850e-47 |
| Msa0680370 | Msa1334560 | 0.828787 | 7.403728e-55 | -8.615850e-47 |
| Msa0680370 | Msa1334670 | 0.804701 | 1.903807e-49 | -8.615850e-47 |
| Msa0680370 | Msa1343450 | -0.810075 | 1.380234e-50 | -8.615850e-47 |
| Msa0680370 | Msa1346340 | -0.802491 | 5.471531e-49 | -8.615850e-47 |
| Msa0680370 | Msa1347610 | 0.817408 | 3.349787e-52 | -8.615850e-47 |
| Msa0680370 | Msa1348860 | -0.803308 | 3.708803e-49 | -8.615850e-47 |
| Msa0680370 | Msa1352630 | -0.813112 | 3.018698e-51 | -8.615850e-47 |
| Msa0680370 | Msa1362590 | 0.813701 | 2.240111e-51 | -8.615850e-47 |
| Msa0680370 | Msa1365130 | -0.803358 | 3.621503e-49 | -8.615850e-47 |
| Msa0680370 | Msa1365230 | 0.804295 | 2.313409e-49 | -8.615850e-47 |
| Msa0680370 | Msa1367900 | -0.805981 | 1.026790e-49 | -8.615850e-47 |
| Msa0680370 | Msa1371800 | 0.803006 | 4.283651e-49 | -8.615850e-47 |
| Msa0680370 | Msa1372030 | 0.802613 | 5.162958e-49 | -8.615850e-47 |
| Msa0680370 | Msa1376310 | 0.806708 | 7.215712e-50 | -8.615850e-47 |
| Msa0680370 | Msa1379270 | -0.803189 | 3.925641e-49 | -8.615850e-47 |
| Msa0680370 | Msa1379940 | 0.814382 | 1.585463e-51 | -8.615850e-47 |
| Msa0680370 | Msa1381300 | -0.804034 | 2.622370e-49 | -8.615850e-47 |
| Msa0680370 | Msa1382100 | -0.802875 | 4.558751e-49 | -8.615850e-47 |
| Msa0680370 | Msa1387530 | 0.809178 | 2.150943e-50 | -8.615850e-47 |
| Msa0680370 | Msa1392570 | -0.827470 | 1.537454e-54 | -8.615850e-47 |
| Msa0680370 | Msa1401000 | -0.835878 | 1.298662e-56 | -8.615850e-47 |
| Msa0680370 | Msa1407810 | 0.812930 | 3.308146e-51 | -8.615850e-47 |
| Msa0680370 | Msa1413020 | 0.809819 | 1.566828e-50 | -8.615850e-47 |
| Msa0680370 | Msa1417950 | 0.804236 | 2.379417e-49 | -8.615850e-47 |
| Msa0680370 | Msa1421630 | 0.828085 | 1.093397e-54 | -8.615850e-47 |
| Msa0680370 | Msa1434700 | 0.801337 | 9.445336e-49 | -8.615850e-47 |
| Msa0680370 | Msa1435950 | -0.813565 | 2.400034e-51 | -8.615850e-47 |
| Msa0680370 | Msa1437780 | 0.814235 | 1.708159e-51 | -8.615850e-47 |
| Msa0680370 | Msa1447900 | 0.831435 | 1.671851e-55 | -8.615850e-47 |
| Msa0680370 | Msa1450630 | -0.828972 | 6.677811e-55 | -8.615850e-47 |
| Msa0680370 | Msa1462610 | 0.804557 | 2.039990e-49 | -8.615850e-47 |
| Msa0680370 | Msa1462780 | 0.810750 | 9.867957e-51 | -8.615850e-47 |
| Msa0121320 | Msa0680370 | 0.827237 | 1.747505e-54 | -8.615850e-47 |
| Msa0132920 | Msa0680370 | -0.800617 | 1.325314e-48 | -8.615850e-47 |
| Msa0135470 | Msa0680370 | -0.807510 | 4.880772e-50 | -8.615850e-47 |
| Msa0136180 | Msa0680370 | -0.816744 | 4.722475e-52 | -8.615850e-47 |
| Msa0137010 | Msa0680370 | -0.829468 | 5.061135e-55 | -8.615850e-47 |
| Msa0140870 | Msa0680370 | -0.828524 | 8.571887e-55 | -8.615850e-47 |
| Msa0147680 | Msa0680370 | 0.808043 | 3.759086e-50 | -8.615850e-47 |
| Msa0166180 | Msa0680370 | 0.832374 | 9.802126e-56 | -8.615850e-47 |
| Msa0178440 | Msa0680370 | -0.832360 | 9.883040e-56 | -8.615850e-47 |
| Msa0194750 | Msa0680370 | -0.810832 | 9.473610e-51 | -8.615850e-47 |
| Msa0196260 | Msa0680370 | 0.826331 | 2.877331e-54 | -8.615850e-47 |
| Msa0211460 | Msa0680370 | 0.839603 | 1.435462e-57 | -8.615850e-47 |
| Msa0218060 | Msa0680370 | 0.810712 | 1.005802e-50 | -8.615850e-47 |
| Msa0225070 | Msa0680370 | -0.820792 | 5.688332e-53 | -8.615850e-47 |
| Msa0235080 | Msa0680370 | 0.812388 | 4.348004e-51 | -8.615850e-47 |
| Msa0236690 | Msa0680370 | -0.815400 | 9.425597e-52 | -8.615850e-47 |
| Msa0364910 | Msa0680370 | -0.808675 | 2.756120e-50 | -8.615850e-47 |
| Msa0367590 | Msa0680370 | -0.806650 | 7.419900e-50 | -8.615850e-47 |
| Msa0370350 | Msa0680370 | -0.801047 | 1.082370e-48 | -8.615850e-47 |
| Msa0371350 | Msa0680370 | -0.812185 | 4.813603e-51 | -8.615850e-47 |
| Msa0375570 | Msa0680370 | -0.801499 | 8.749868e-49 | -8.615850e-47 |
| Msa0385770 | Msa0680370 | -0.802324 | 5.920504e-49 | -8.615850e-47 |
| Msa0388210 | Msa0680370 | 0.807765 | 4.307193e-50 | -8.615850e-47 |
| Msa0416210 | Msa0680370 | 0.802877 | 4.555078e-49 | -8.615850e-47 |
| Msa0419420 | Msa0680370 | -0.811826 | 5.764106e-51 | -8.615850e-47 |
| Msa0428330 | Msa0680370 | -0.809535 | 1.803715e-50 | -8.615850e-47 |
| Msa0430040 | Msa0680370 | -0.820332 | 7.253295e-53 | -8.615850e-47 |
| Msa0434820 | Msa0680370 | -0.805597 | 1.236011e-49 | -8.615850e-47 |
| Msa0436100 | Msa0680370 | 0.837779 | 4.248604e-57 | -8.615850e-47 |
| Msa0436590 | Msa0680370 | -0.805497 | 1.297178e-49 | -8.615850e-47 |
| Msa0457070 | Msa0680370 | -0.809713 | 1.651175e-50 | -8.615850e-47 |
| Msa0471130 | Msa0680370 | -0.804432 | 2.166370e-49 | -8.615850e-47 |
| Msa0481670 | Msa0680370 | 0.811436 | 7.007450e-51 | -8.615850e-47 |
| Msa0240590 | Msa0680370 | -0.812869 | 3.411570e-51 | -8.615850e-47 |
| Msa0260980 | Msa0680370 | 0.803999 | 2.666710e-49 | -8.615850e-47 |
| Msa0266140 | Msa0680370 | -0.809967 | 1.456397e-50 | -8.615850e-47 |
| Msa0267450 | Msa0680370 | -0.837917 | 3.917200e-57 | -8.615850e-47 |
| Msa0267510 | Msa0680370 | -0.834361 | 3.133159e-56 | -8.615850e-47 |
| Msa0269660 | Msa0680370 | -0.802705 | 4.942550e-49 | -8.615850e-47 |
| Msa0272990 | Msa0680370 | -0.803589 | 3.243995e-49 | -8.615850e-47 |
| Msa0276800 | Msa0680370 | -0.818855 | 1.576558e-52 | -8.615850e-47 |
| Msa0279810 | Msa0680370 | 0.801731 | 7.839281e-49 | -8.615850e-47 |
| Msa0290800 | Msa0680370 | 0.826650 | 2.414873e-54 | -8.615850e-47 |
| Msa0302310 | Msa0680370 | -0.802939 | 4.421555e-49 | -8.615850e-47 |
| Msa0304060 | Msa0680370 | -0.818233 | 2.181672e-52 | -8.615850e-47 |
| Msa0307430 | Msa0680370 | 0.829196 | 5.892431e-55 | -8.615850e-47 |
| Msa0307630 | Msa0680370 | 0.806864 | 6.687815e-50 | -8.615850e-47 |
| Msa0316000 | Msa0680370 | 0.811939 | 5.446188e-51 | -8.615850e-47 |
| Msa0316720 | Msa0680370 | -0.818939 | 1.508461e-52 | -8.615850e-47 |
| Msa0328870 | Msa0680370 | 0.834582 | 2.758223e-56 | -8.615850e-47 |
| Msa0331070 | Msa0680370 | -0.800476 | 1.416028e-48 | -8.615850e-47 |
| Msa0336520 | Msa0680370 | 0.817076 | 3.977653e-52 | -8.615850e-47 |
| Msa0483090 | Msa0680370 | -0.821383 | 4.158293e-53 | -8.615850e-47 |
| Msa0506750 | Msa0680370 | 0.819938 | 8.929114e-53 | -8.615850e-47 |
| Msa0518410 | Msa0680370 | 0.800380 | 1.480995e-48 | -8.615850e-47 |
| Msa0522810 | Msa0680370 | -0.803389 | 3.568428e-49 | -8.615850e-47 |
| Msa0526150 | Msa0680370 | 0.829391 | 5.285724e-55 | -8.615850e-47 |
| Msa0538050 | Msa0680370 | -0.810922 | 9.060643e-51 | -8.615850e-47 |
| Msa0567330 | Msa0680370 | 0.816399 | 5.642592e-52 | -8.615850e-47 |
| Msa0567570 | Msa0680370 | 0.814857 | 1.244091e-51 | -8.615850e-47 |
| Msa0568460 | Msa0680370 | -0.841820 | 3.768666e-58 | -8.615850e-47 |
| Msa0572360 | Msa0680370 | 0.823909 | 1.074676e-53 | -8.615850e-47 |
| Msa0576320 | Msa0680370 | 0.829321 | 5.495885e-55 | -8.615850e-47 |
| Msa0585720 | Msa0680370 | -0.805824 | 1.107450e-49 | -8.615850e-47 |
| Msa0587180 | Msa0680370 | 0.817130 | 3.868248e-52 | -8.615850e-47 |
| Msa0601380 | Msa0680370 | 0.869943 | 2.118577e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680370 | MtrunA17_Chr4g0026371 | 89.813 | 589 | 40 | 1 | 1 | 569 | 1 | 589 | 0.0 | 1004 |
| Msa0680370 | MtrunA17_Chr8g0375501 | 45.424 | 590 | 291 | 5 | 7 | 569 | 6 | 591 | 0.0 | 545 |
| Msa0680370 | MtrunA17_Chr5g0434001 | 45.904 | 586 | 291 | 4 | 8 | 569 | 24 | 607 | 0.0 | 544 |
| Msa0680370 | MtrunA17_Chr6g0480551 | 44.351 | 593 | 301 | 5 | 1 | 569 | 1 | 588 | 0.0 | 526 |
| Msa0680370 | MtrunA17_Chr8g0342031 | 30.156 | 577 | 345 | 8 | 43 | 567 | 76 | 646 | 1.77e-94 | 302 |
| Msa0680370 | MtrunA17_Chr2g0277491 | 32.414 | 580 | 352 | 7 | 20 | 569 | 14 | 583 | 5.26e-92 | 294 |
| Msa0680370 | MtrunA17_Chr8g0380651 | 31.904 | 583 | 345 | 11 | 24 | 569 | 22 | 589 | 2.13e-89 | 287 |
| Msa0680370 | MtrunA17_Chr1g0150181 | 30.314 | 574 | 344 | 9 | 45 | 567 | 67 | 635 | 4.48e-89 | 288 |
| Msa0680370 | MtrunA17_Chr3g0136881 | 31.023 | 577 | 338 | 10 | 46 | 567 | 63 | 634 | 2.35e-87 | 283 |
| Msa0680370 | MtrunA17_Chr4g0065301 | 28.090 | 623 | 356 | 14 | 28 | 569 | 45 | 656 | 2.29e-72 | 244 |
| Msa0680370 | MtrunA17_Chr5g0448371 | 26.333 | 619 | 367 | 14 | 28 | 567 | 55 | 663 | 1.33e-57 | 204 |
| Msa0680370 | MtrunA17_Chr3g0120461 | 26.375 | 618 | 368 | 15 | 28 | 567 | 49 | 657 | 2.24e-55 | 197 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680370 | AT1G08350.3 | 50.514 | 584 | 262 | 5 | 8 | 569 | 11 | 589 | 0.0 | 598 |
| Msa0680370 | AT1G08350.2 | 50.514 | 584 | 262 | 5 | 8 | 569 | 11 | 589 | 0.0 | 598 |
| Msa0680370 | AT1G08350.1 | 51.874 | 507 | 242 | 2 | 65 | 569 | 2 | 508 | 0.0 | 556 |
| Msa0680370 | AT2G01970.1 | 44.688 | 593 | 303 | 4 | 1 | 569 | 1 | 592 | 0.0 | 537 |
| Msa0680370 | AT1G14670.1 | 45.194 | 593 | 300 | 4 | 1 | 569 | 1 | 592 | 0.0 | 535 |
| Msa0680370 | AT5G37310.1 | 45.424 | 590 | 297 | 4 | 4 | 569 | 5 | 593 | 0.0 | 530 |
| Msa0680370 | AT5G37310.2 | 45.424 | 590 | 297 | 4 | 4 | 569 | 5 | 593 | 0.0 | 530 |
| Msa0680370 | AT1G08350.4 | 48.544 | 515 | 238 | 5 | 8 | 500 | 11 | 520 | 5.36e-172 | 498 |
| Msa0680370 | AT3G13772.1 | 30.782 | 588 | 337 | 10 | 39 | 567 | 63 | 639 | 1.08e-96 | 308 |
| Msa0680370 | AT2G24170.1 | 31.076 | 576 | 341 | 9 | 43 | 567 | 65 | 635 | 1.22e-92 | 297 |
| Msa0680370 | AT1G10950.1 | 31.424 | 576 | 355 | 7 | 24 | 569 | 24 | 589 | 8.54e-91 | 291 |
| Msa0680370 | AT1G55130.1 | 29.082 | 588 | 347 | 10 | 39 | 567 | 59 | 635 | 1.84e-89 | 289 |
| Msa0680370 | AT5G25100.1 | 30.860 | 593 | 335 | 10 | 36 | 567 | 64 | 642 | 2.69e-83 | 273 |
| Msa0680370 | AT5G25100.2 | 30.860 | 593 | 335 | 10 | 36 | 567 | 71 | 649 | 2.92e-83 | 273 |
| Msa0680370 | AT5G10840.1 | 30.626 | 591 | 337 | 9 | 36 | 567 | 70 | 646 | 1.16e-82 | 271 |
| Msa0680370 | AT5G35160.1 | 26.989 | 641 | 370 | 16 | 8 | 569 | 9 | 630 | 2.16e-62 | 217 |
| Msa0680370 | AT5G35160.2 | 26.400 | 625 | 366 | 14 | 28 | 569 | 45 | 658 | 1.22e-61 | 215 |
| Msa0680370 | AT5G35160.3 | 26.400 | 625 | 366 | 14 | 28 | 569 | 45 | 658 | 1.22e-61 | 215 |
| Msa0680370 | AT5G35160.4 | 26.400 | 625 | 366 | 14 | 28 | 569 | 45 | 658 | 1.22e-61 | 215 |
| Msa0680370 | AT4G12650.1 | 26.892 | 621 | 361 | 14 | 28 | 567 | 42 | 650 | 1.88e-58 | 206 |
| Msa0680370 | AT2G24170.2 | 28.125 | 384 | 222 | 7 | 43 | 376 | 65 | 444 | 1.34e-46 | 170 |
Find 159 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTGATGATCTTCCATTT+TGG | 0.104752 | 4_4:-39401055 | Msa0680370:CDS |
| AGCAAGTTAAACGATAATTT+TGG | 0.129845 | 4_4:-39396482 | Msa0680370:three_prime_UTR |
| TTACAACTATCCTTCTTTAT+TGG | 0.166873 | 4_4:-39397095 | Msa0680370:CDS |
| TCGGTTTAGGTCCAAGTTTC+AGG | 0.182537 | 4_4:-39398182 | Msa0680370:CDS |
| TATGCTTTCTTCCTGATATT+TGG | 0.187363 | 4_4:-39397053 | Msa0680370:CDS |
| ATCGTGATTATTAGTTTATT+TGG | 0.195282 | 4_4:-39398250 | Msa0680370:CDS |
| ACACCATTTCAAATGTTTAT+TGG | 0.207200 | 4_4:-39398100 | Msa0680370:CDS |
| ATACACTCTTCCTGGCATTT+TGG | 0.207826 | 4_4:-39398005 | Msa0680370:CDS |
| GACCACTCCAAAGTGTAATT+TGG | 0.216068 | 4_4:-39396616 | Msa0680370:three_prime_UTR |
| AATTCACTTATTCGGTTATC+TGG | 0.221535 | 4_4:-39400851 | Msa0680370:CDS |
| AAGCTTACAATTGATGAAAT+TGG | 0.229144 | 4_4:-39401122 | Msa0680370:CDS |
| ACATTATTGCAATATCTTAC+AGG | 0.260840 | 4_4:-39398303 | Msa0680370:CDS |
| CCCATCCATTCTCAGCAAAT+TGG | 0.263581 | 4_4:+39398484 | None:intergenic |
| GATTGATGAACTCTTCTCTT+TGG | 0.264860 | 4_4:-39396919 | Msa0680370:three_prime_UTR |
| TAGCGTACACCTGGTGTAAT+TGG | 0.283426 | 4_4:+39398047 | None:intergenic |
| AACATCAATGCCAACATCTT+TGG | 0.283609 | 4_4:+39400875 | None:intergenic |
| AGAGGGTAGGTTGTTAGAAT+TGG | 0.300458 | 4_4:-39396730 | Msa0680370:three_prime_UTR |
| TGATGTTAAATTCACTTATT+CGG | 0.301127 | 4_4:-39400859 | Msa0680370:CDS |
| CAAGCTGAACATGTGTAAAA+AGG | 0.322583 | 4_4:+39400970 | None:intergenic |
| CACAGTTTGGAAGAGCTTTA+CGG | 0.324619 | 4_4:-39396773 | Msa0680370:three_prime_UTR |
| CGATCCCATTACTTGCATTC+GGG | 0.330440 | 4_4:-39398219 | Msa0680370:CDS |
| GAGTAATTGGATATCGGTTT+AGG | 0.339176 | 4_4:-39398195 | Msa0680370:CDS |
| AGAAAGGAGTGGAATTATAG+AGG | 0.344095 | 4_4:-39396748 | Msa0680370:three_prime_UTR |
| GTTTGTATGAGTTCAAATTC+AGG | 0.346786 | 4_4:-39401178 | Msa0680370:CDS |
| GTTATATCTACAGCGCGATT+TGG | 0.348460 | 4_4:+39400897 | None:intergenic |
| TCGATCCCATTACTTGCATT+CGG | 0.351439 | 4_4:-39398220 | Msa0680370:CDS |
| AACTGATGGCACCAAATATC+AGG | 0.360427 | 4_4:+39397042 | None:intergenic |
| CAAATCACATCTACAACGTT+GGG | 0.372759 | 4_4:-39401728 | Msa0680370:CDS |
| CTTCTGTTCCTAGCAATTAT+CGG | 0.376000 | 4_4:-39398609 | Msa0680370:CDS |
| GAGAAGAGTGTTAGTCTAGC+TGG | 0.385735 | 4_4:-39398370 | Msa0680370:CDS |
| ACCGTAACCAAACATGAAAA+TGG | 0.387429 | 4_4:+39397154 | None:intergenic |
| CATACCTCCACCACCATTCA+TGG | 0.389249 | 4_4:+39397903 | None:intergenic |
| CTAGCGCAAATGAAGAAGAT+AGG | 0.390988 | 4_4:-39400550 | Msa0680370:CDS |
| GGAAGCTGTTGAATCTCTTT+CGG | 0.396624 | 4_4:+39398136 | None:intergenic |
| TCTGGAATGCCACTGAATTA+CGG | 0.400032 | 4_4:-39400833 | Msa0680370:CDS |
| AAATCCATGGCTGCACAGTT+TGG | 0.401672 | 4_4:-39396786 | Msa0680370:three_prime_UTR |
| TACAAAATATACACTCTTCC+TGG | 0.403164 | 4_4:-39398013 | Msa0680370:CDS |
| GTTGTAGAAGTAAAAGCATT+TGG | 0.408783 | 4_4:-39400924 | Msa0680370:CDS |
| ACAGTTTGGAAGAGCTTTAC+GGG | 0.409540 | 4_4:-39396772 | Msa0680370:three_prime_UTR |
| GTCACAGCTGGACTCCCATT+GGG | 0.412663 | 4_4:-39398280 | Msa0680370:CDS |
| AGCTTGATGTTCTTTACAAT+GGG | 0.413660 | 4_4:-39400953 | Msa0680370:CDS |
| GTCCAAGTTTCAGGTCCCCT+TGG | 0.415276 | 4_4:-39398173 | Msa0680370:CDS |
| GAATGGTGAAGATGAGGAGA+AGG | 0.426866 | 4_4:+39401781 | None:intergenic |
| GAAGATGAAAGTTTGATTCA+TGG | 0.429871 | 4_4:-39401014 | Msa0680370:CDS |
| CATGGCCAATTTGCTGAGAA+TGG | 0.430352 | 4_4:-39398489 | Msa0680370:CDS |
| TCCAAGTTTCAGGTCCCCTT+GGG | 0.431667 | 4_4:-39398172 | Msa0680370:CDS |
| ACTCACATTTAACTAACATC+AGG | 0.435532 | 4_4:+39396545 | None:intergenic |
| CAGATGAAAGAGCGAATAGA+AGG | 0.436318 | 4_4:+39398541 | None:intergenic |
| TCAAATATCTCGTATAAAGC+AGG | 0.441728 | 4_4:+39400691 | None:intergenic |
| AAGAGATTCAACAGCTTCCT+TGG | 0.444008 | 4_4:-39398132 | Msa0680370:CDS |
| GGTTGTTAGAATTGGAGATC+AGG | 0.446325 | 4_4:-39396722 | Msa0680370:three_prime_UTR |
| ACCCAAGGGGACCTGAAACT+TGG | 0.452480 | 4_4:+39398171 | None:intergenic |
| TTTGATAACAGTTTATTCCT+TGG | 0.452715 | 4_4:-39396878 | Msa0680370:three_prime_UTR |
| TGGGATTCTTTACATTGGTC+CGG | 0.456365 | 4_4:-39398350 | Msa0680370:CDS |
| CAGCTTGATGTTCTTTACAA+TGG | 0.457083 | 4_4:-39400954 | Msa0680370:CDS |
| CCAGGTGTACGCTAGTTTGT+GGG | 0.458018 | 4_4:-39398038 | Msa0680370:CDS |
| AGCTTACAAGATTAGCAGTT+GGG | 0.461088 | 4_4:+39400442 | None:intergenic |
| CACCATGACTGTATGGATAG+AGG | 0.461983 | 4_4:+39398583 | None:intergenic |
| ACCAGGTGTACGCTAGTTTG+TGG | 0.462770 | 4_4:-39398039 | Msa0680370:CDS |
| TTGTGTATCGTAAAGTTCAT+TGG | 0.462873 | 4_4:-39400767 | Msa0680370:CDS |
| GGAGAAGGAGAATGAGGTGA+TGG | 0.465191 | 4_4:+39401796 | None:intergenic |
| ATTACGGTTTGAGAATAGAA+TGG | 0.466201 | 4_4:-39400817 | Msa0680370:CDS |
| TTCAACAGCTTCCTTGGTAC+AGG | 0.467031 | 4_4:-39398126 | Msa0680370:CDS |
| GAAGAGCTTTACGGGAAGAA+AGG | 0.469317 | 4_4:-39396764 | Msa0680370:three_prime_UTR |
| CCTCCAATAAACATTTGAAA+TGG | 0.469524 | 4_4:+39398097 | None:intergenic |
| GGTCACAGCTGGACTCCCAT+TGG | 0.470714 | 4_4:-39398281 | Msa0680370:CDS |
| GAGAAGGAGAATGAGGTGAT+GGG | 0.473388 | 4_4:+39401797 | None:intergenic |
| GAATAGAAGGACAAGCCAAC+TGG | 0.478682 | 4_4:+39398554 | None:intergenic |
| GCCAATTTGCTGAGAATGGA+TGG | 0.479155 | 4_4:-39398485 | Msa0680370:CDS |
| CGGATATCTCTTTGTACCCA+AGG | 0.484114 | 4_4:+39398156 | None:intergenic |
| CCATTTCAAATGTTTATTGG+AGG | 0.484636 | 4_4:-39398097 | Msa0680370:CDS |
| AGCAAAACCAAATTACACTT+TGG | 0.485747 | 4_4:+39396609 | None:intergenic |
| AAGAAGATAGGGAGGTTGGT+TGG | 0.486649 | 4_4:-39400538 | Msa0680370:CDS |
| TGGATGAAAATTGCACCAAA+AGG | 0.486946 | 4_4:+39398067 | None:intergenic |
| TTTGTATGAGTTCAAATTCA+GGG | 0.499515 | 4_4:-39401177 | Msa0680370:CDS |
| TGATGAAATTGGTGTCTTGA+AGG | 0.499596 | 4_4:-39401111 | Msa0680370:CDS |
| GAGAGTCCACCATGACTGTA+TGG | 0.501120 | 4_4:+39398576 | None:intergenic |
| AGATGAGGAGAAGGAGAATG+AGG | 0.503185 | 4_4:+39401790 | None:intergenic |
| AATAAGGACGGGTGCGGAGG+AGG | 0.503888 | 4_4:+39400488 | None:intergenic |
| TCACGATAATAGAGCCCAAT+GGG | 0.504953 | 4_4:+39398266 | None:intergenic |
| TCAAATCACATCTACAACGT+TGG | 0.508263 | 4_4:-39401729 | Msa0680370:CDS |
| GAAAGGAGTGGAATTATAGA+GGG | 0.514988 | 4_4:-39396747 | Msa0680370:three_prime_UTR |
| AATGGTGATCGTTTGAGCAA+TGG | 0.518346 | 4_4:-39401200 | Msa0680370:CDS |
| ATTGTAGAATGGTGAAGATG+AGG | 0.521362 | 4_4:+39401775 | None:intergenic |
| CATTATTGCAATATCTTACA+GGG | 0.521402 | 4_4:-39398302 | Msa0680370:CDS |
| ATATCTTACAGGGTCACAGC+TGG | 0.526781 | 4_4:-39398292 | Msa0680370:CDS |
| GTCTTGAAGGAAGCTATAAA+CGG | 0.528744 | 4_4:-39401098 | Msa0680370:CDS |
| CTAGCTGGGATTCTTTACAT+TGG | 0.529641 | 4_4:-39398355 | Msa0680370:CDS |
| CGCACTGTAGCCAATAAAGA+AGG | 0.533327 | 4_4:+39397085 | None:intergenic |
| TGAAAGTTTGATTCATGGTG+GGG | 0.534546 | 4_4:-39401009 | Msa0680370:CDS |
| ATGAAAGTTTGATTCATGGT+GGG | 0.539192 | 4_4:-39401010 | Msa0680370:CDS |
| AGAAGAGTGTTAGTCTAGCT+GGG | 0.542187 | 4_4:-39398369 | Msa0680370:CDS |
| CTCAGCAAATTGGCCATGGA+AGG | 0.542407 | 4_4:+39398494 | None:intergenic |
| CTCACATTTAACTAACATCA+GGG | 0.545109 | 4_4:+39396546 | None:intergenic |
| TAGCGCAAATGAAGAAGATA+GGG | 0.545410 | 4_4:-39400549 | Msa0680370:CDS |
| CTGAATCAAGACTAAATCCA+TGG | 0.551624 | 4_4:-39396799 | Msa0680370:three_prime_UTR |
| AATGAAGAAGATAGGGAGGT+TGG | 0.554718 | 4_4:-39400542 | Msa0680370:CDS |
| AACGTTGTAGATGTGATTTG+AGG | 0.557372 | 4_4:+39401731 | None:intergenic |
| TCTTCCAAACTGTGCAGCCA+TGG | 0.557389 | 4_4:+39396782 | None:intergenic |
| ACCATGACTGTATGGATAGA+GGG | 0.558598 | 4_4:+39398584 | None:intergenic |
| CAATTTGCAATCAAACATGT+TGG | 0.559250 | 4_4:+39396663 | None:intergenic |
| CATTCTCAGCAAATTGGCCA+TGG | 0.562379 | 4_4:+39398490 | None:intergenic |
| AGAAGGAGAATGAGGTGATG+GGG | 0.562448 | 4_4:+39401798 | None:intergenic |
| GGATATCTCTTTGTACCCAA+GGG | 0.562534 | 4_4:+39398157 | None:intergenic |
| CCCACAAACTAGCGTACACC+TGG | 0.564764 | 4_4:+39398038 | None:intergenic |
| TAGCTTACAAGATTAGCAGT+TGG | 0.564792 | 4_4:+39400441 | None:intergenic |
| AGTGTCGCAGCCAAAATGCC+AGG | 0.566462 | 4_4:+39397995 | None:intergenic |
| TACTCAACAGCATCCTTCCA+TGG | 0.574888 | 4_4:-39398507 | Msa0680370:CDS |
| TCTCTTGGAGAAGTTCTCAA+TGG | 0.576224 | 4_4:-39401218 | Msa0680370:CDS |
| GGAGTGGAATTATAGAGGGT+AGG | 0.577279 | 4_4:-39396743 | Msa0680370:three_prime_UTR |
| CAAAGAAACTCTGAAACTGA+TGG | 0.577705 | 4_4:+39397028 | None:intergenic |
| ATTGTTGCGCTCGTAAATGT+TGG | 0.577891 | 4_4:-39397956 | Msa0680370:CDS |
| CAAATATCTCGTATAAAGCA+GGG | 0.578014 | 4_4:+39400692 | None:intergenic |
| GTAGATATAACCAAAGATGT+TGG | 0.578689 | 4_4:-39400885 | Msa0680370:CDS |
| GACATATGTTCAACTATCTG+TGG | 0.579107 | 4_4:-39397930 | Msa0680370:CDS |
| AACGGTAGAAGATTGTAGAA+TGG | 0.584443 | 4_4:+39401764 | None:intergenic |
| CGATAATTGCTAGGAACAGA+AGG | 0.585429 | 4_4:+39398610 | None:intergenic |
| CTTGGTTGAATTCTTCAACA+AGG | 0.585822 | 4_4:-39396860 | Msa0680370:three_prime_UTR |
| ATTTGAGGTTGATGCGGTAA+CGG | 0.587799 | 4_4:+39401746 | None:intergenic |
| AGAGGGTACCGATAATTGCT+AGG | 0.591090 | 4_4:+39398601 | None:intergenic |
| GTCATGGTGGACTCTCCAGT+TGG | 0.591186 | 4_4:-39398569 | Msa0680370:CDS |
| TTTATACGAGATATTTGAAG+AGG | 0.593080 | 4_4:-39400686 | Msa0680370:CDS |
| TGCAGATCTGTGCTGTGTGG+TGG | 0.593952 | 4_4:-39397185 | Msa0680370:intron |
| TGGCAACCTCATAAACAACC+AGG | 0.593967 | 4_4:+39396683 | None:intergenic |
| TGGAAGACCATGAATGGTGG+TGG | 0.594903 | 4_4:-39397910 | Msa0680370:CDS |
| TCTCAAGCACAAAGTAACAT+TGG | 0.601261 | 4_4:-39396953 | Msa0680370:three_prime_UTR |
| GAAAGTTTGATTCATGGTGG+GGG | 0.605503 | 4_4:-39401008 | Msa0680370:CDS |
| ATCACGATAATAGAGCCCAA+TGG | 0.607721 | 4_4:+39398265 | None:intergenic |
| TTATACGAGATATTTGAAGA+GGG | 0.612050 | 4_4:-39400685 | Msa0680370:CDS |
| AAGATATTGCAATAATGTTG+AGG | 0.614798 | 4_4:+39398308 | None:intergenic |
| ATTCTCAAACCGTAATTCAG+TGG | 0.618167 | 4_4:+39400824 | None:intergenic |
| GGTCATTAGACACACGATTG+AGG | 0.618324 | 4_4:+39396635 | None:intergenic |
| GTTGGTTGGAAGTCAATCCA+TGG | 0.623172 | 4_4:-39400524 | Msa0680370:CDS |
| ACCCTCTATCCATACAGTCA+TGG | 0.624597 | 4_4:-39398585 | Msa0680370:CDS |
| GATGAAAGTTTGATTCATGG+TGG | 0.627468 | 4_4:-39401011 | Msa0680370:CDS |
| CTTGTTGAAGAATTCAACCA+AGG | 0.628061 | 4_4:+39396861 | None:intergenic |
| TATCTGTGGAAGACCATGAA+TGG | 0.629462 | 4_4:-39397916 | Msa0680370:CDS |
| AACCAAATTACACTTTGGAG+TGG | 0.632487 | 4_4:+39396614 | None:intergenic |
| ATAGAGAATGCAACAAACAC+CGG | 0.633680 | 4_4:+39398331 | None:intergenic |
| ATCCCATTACTTGCATTCGG+GGG | 0.634423 | 4_4:-39398217 | Msa0680370:CDS |
| CGCAAATGAAGAAGATAGGG+AGG | 0.637904 | 4_4:-39400546 | Msa0680370:CDS |
| GATCCCATTACTTGCATTCG+GGG | 0.641089 | 4_4:-39398218 | Msa0680370:CDS |
| CTCTATCCATACAGTCATGG+TGG | 0.644933 | 4_4:-39398582 | Msa0680370:CDS |
| AAGACCATGAATGGTGGTGG+AGG | 0.651799 | 4_4:-39397907 | Msa0680370:intron |
| GGCAACCTCATAAACAACCA+GGG | 0.655525 | 4_4:+39396684 | None:intergenic |
| CAAAAGCAAAATGATGACGA+AGG | 0.660240 | 4_4:+39400728 | None:intergenic |
| CAGGTGTACGCTAGTTTGTG+GGG | 0.666363 | 4_4:-39398037 | Msa0680370:CDS |
| CCAATTTGCTGAGAATGGAT+GGG | 0.667467 | 4_4:-39398484 | Msa0680370:intron |
| TATGCAAGATCAAGAATGAG+CGG | 0.669114 | 4_4:-39397122 | Msa0680370:CDS |
| GTGTGCAGATCTGTGCTGTG+TGG | 0.676378 | 4_4:-39397188 | Msa0680370:intron |
| AAATCACATCTACAACGTTG+GGG | 0.680330 | 4_4:-39401727 | Msa0680370:CDS |
| GATATCTCTTTGTACCCAAG+GGG | 0.684564 | 4_4:+39398158 | None:intergenic |
| GCTTTACGGGAAGAAAGGAG+TGG | 0.689124 | 4_4:-39396759 | Msa0680370:three_prime_UTR |
| GCAACCTCATAAACAACCAG+GGG | 0.692045 | 4_4:+39396685 | None:intergenic |
| GAGGCTTGAATACATCACCA+TGG | 0.694814 | 4_4:+39400507 | None:intergenic |
| GATGTGATTTGAGGTTGATG+CGG | 0.702090 | 4_4:+39401740 | None:intergenic |
| AATGGTGTTCTCCTGTACCA+AGG | 0.705648 | 4_4:+39398115 | None:intergenic |
| CTGTGGAAGACCATGAATGG+TGG | 0.732393 | 4_4:-39397913 | Msa0680370:CDS |
| CAACCTCATAAACAACCAGG+GGG | 0.765718 | 4_4:+39396686 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGAAAATCAAATAATTA+AGG | - | chr4_4:39396958-39396977 | Msa0680370:three_prime_UTR | 10.0% |
| !! | AATGAAAATCAAATAATTAA+GGG | - | chr4_4:39396959-39396978 | Msa0680370:three_prime_UTR | 10.0% |
| !! | AAAGAAAAATTGAATGAAAA+TGG | + | chr4_4:39396673-39396692 | None:intergenic | 15.0% |
| !! | ATGAAAATCAAATAATTAAG+GGG | - | chr4_4:39396960-39396979 | Msa0680370:three_prime_UTR | 15.0% |
| !! | ATTGTAAAATGAATATAGTT+AGG | + | chr4_4:39397691-39397710 | None:intergenic | 15.0% |
| !!! | CTATATTCATTTTACAATTT+AGG | - | chr4_4:39397693-39397712 | Msa0680370:intron | 15.0% |
| !! | TTAAATATTTCTTGATTGTT+TGG | + | chr4_4:39398292-39398311 | None:intergenic | 15.0% |
| !!! | CTTTTAATATTCTATATTCA+AGG | + | chr4_4:39399340-39399359 | None:intergenic | 15.0% |
| !! | AGAAATTAAATTGAAAAGAA+AGG | + | chr4_4:39399564-39399583 | None:intergenic | 15.0% |
| !!! | TTCTTTTCAATTTAATTTCT+TGG | - | chr4_4:39399564-39399583 | Msa0680370:intron | 15.0% |
| !! | GGTTAAAAATGAAATAAAAA+TGG | + | chr4_4:39399849-39399868 | None:intergenic | 15.0% |
| !!! | ACTTTGAAACTAAAATTTAT+CGG | + | chr4_4:39400787-39400806 | None:intergenic | 15.0% |
| !! | TGAAAATTGAATGAAAATAG+AGG | + | chr4_4:39396635-39396654 | None:intergenic | 20.0% |
| !! | AAATAATTAAGGGGTTTAAT+TGG | - | chr4_4:39396969-39396988 | Msa0680370:exon | 20.0% |
| !!! | ATTCTATCTTTTTCACTATT+GGG | + | chr4_4:39397033-39397052 | None:intergenic | 20.0% |
| !! | TGATGTTAAATTCACTTATT+CGG | - | chr4_4:39397411-39397430 | Msa0680370:intron | 20.0% |
| !!! | AAGGATTTTATTACAAACAT+AGG | + | chr4_4:39398002-39398021 | None:intergenic | 20.0% |
| !!! | CCTCAAGTTTTTTTTTTTTT+TGG | + | chr4_4:39398269-39398288 | None:intergenic | 20.0% |
| !! | CCAAAAAAAAAAAAAACTTG+AGG | - | chr4_4:39398266-39398285 | Msa0680370:CDS | 20.0% |
| !! | GATATGATTTATAGTAAGTT+TGG | - | chr4_4:39398332-39398351 | Msa0680370:CDS | 20.0% |
| !! | TTCTAATATAGAAATCAAAG+AGG | - | chr4_4:39398708-39398727 | Msa0680370:intron | 20.0% |
| !! | AGAGGAATATTTATGTAAAT+AGG | - | chr4_4:39398984-39399003 | Msa0680370:intron | 20.0% |
| !!! | AAAAACCCAAATTTTGAATT+GGG | + | chr4_4:39399186-39399205 | None:intergenic | 20.0% |
| !!! | ATCGTGATTATTAGTTTATT+TGG | - | chr4_4:39400020-39400039 | Msa0680370:intron | 20.0% |
| !! | AGAAAAAACATTAAAAGTGA+TGG | + | chr4_4:39400429-39400448 | None:intergenic | 20.0% |
| !! | AATACATTTAATTGCTTCAA+AGG | - | chr4_4:39400853-39400872 | Msa0680370:CDS | 20.0% |
| !!! | TTTTAAAAAGTACAGGAATA+GGG | - | chr4_4:39400876-39400895 | Msa0680370:CDS | 20.0% |
| !!! | TTTTGACATTATGGTATATA+TGG | + | chr4_4:39401279-39401298 | None:intergenic | 20.0% |
| ! | CTACTTTGTTGACAAAAAAT+GGG | + | chr4_4:39396576-39396595 | None:intergenic | 25.0% |
| ! | TGGTAATTCATAGTATTCAT+AGG | + | chr4_4:39396720-39396739 | None:intergenic | 25.0% |
| !!! | GATTCTATCTTTTTCACTAT+TGG | + | chr4_4:39397034-39397053 | None:intergenic | 25.0% |
| ! | TTTGTATGAGTTCAAATTCA+GGG | - | chr4_4:39397093-39397112 | Msa0680370:CDS | 25.0% |
| ! | AAGCTTACAATTGATGAAAT+TGG | - | chr4_4:39397148-39397167 | Msa0680370:CDS | 25.0% |
| ! | TTTATACGAGATATTTGAAG+AGG | - | chr4_4:39397584-39397603 | Msa0680370:intron | 25.0% |
| ! | TTATACGAGATATTTGAAGA+GGG | - | chr4_4:39397585-39397604 | Msa0680370:intron | 25.0% |
| !!! | TACAAGAGAAGATTTTTAGT+AGG | - | chr4_4:39397648-39397667 | Msa0680370:intron | 25.0% |
| ! | ACACTTCATATATTGTTATG+AGG | + | chr4_4:39397947-39397966 | None:intergenic | 25.0% |
| !! | ATTTTGTACAAGATAAGAGT+GGG | - | chr4_4:39398139-39398158 | Msa0680370:CDS | 25.0% |
| ! | GTCAATAAATTCATCTTTGA+AGG | - | chr4_4:39398438-39398457 | Msa0680370:intron | 25.0% |
| ! | TACAGAAGTTGAAAGAATTA+GGG | + | chr4_4:39398511-39398530 | None:intergenic | 25.0% |
| ! | TAGAAAGATATCATATTCCA+TGG | + | chr4_4:39398554-39398573 | None:intergenic | 25.0% |
| !! | TTTTCTCATGTTACACAAAT+GGG | + | chr4_4:39398776-39398795 | None:intergenic | 25.0% |
| ! | CAATTTACAAGTAAACTGTT+AGG | - | chr4_4:39398898-39398917 | Msa0680370:intron | 25.0% |
| ! | ACTGTTAGGATATAGAATAA+AGG | - | chr4_4:39398912-39398931 | Msa0680370:intron | 25.0% |
| ! | CTGTTAGGATATAGAATAAA+GGG | - | chr4_4:39398913-39398932 | Msa0680370:intron | 25.0% |
| ! | TGTTAGGATATAGAATAAAG+GGG | - | chr4_4:39398914-39398933 | Msa0680370:intron | 25.0% |
| ! | TTAAGAGTAATTAGAGTAGT+TGG | - | chr4_4:39398947-39398966 | Msa0680370:intron | 25.0% |
| ! | GGAATATTTATGTAAATAGG+AGG | - | chr4_4:39398987-39399006 | Msa0680370:intron | 25.0% |
| !! | CAAAAACCCAAATTTTGAAT+TGG | + | chr4_4:39399187-39399206 | None:intergenic | 25.0% |
| ! | AAAGAATATTAAAGGATCGA+GGG | - | chr4_4:39399278-39399297 | Msa0680370:intron | 25.0% |
| ! | ATATTAAAAGTAGTTAGAGC+AGG | - | chr4_4:39399350-39399369 | Msa0680370:intron | 25.0% |
| !! | GAAAGGACTATTTTATTGAA+AGG | + | chr4_4:39399547-39399566 | None:intergenic | 25.0% |
| ! | AAAGTTAACGACTTTATGTT+AGG | + | chr4_4:39399592-39399611 | None:intergenic | 25.0% |
| ! | AATTCTATATGCATTTCTCA+AGG | - | chr4_4:39399810-39399829 | Msa0680370:intron | 25.0% |
| ! | AAGATATTGCAATAATGTTG+AGG | + | chr4_4:39399965-39399984 | None:intergenic | 25.0% |
| ! | ACATTATTGCAATATCTTAC+AGG | - | chr4_4:39399967-39399986 | Msa0680370:intron | 25.0% |
| ! | CATTATTGCAATATCTTACA+GGG | - | chr4_4:39399968-39399987 | Msa0680370:intron | 25.0% |
| ! | ACACCATTTCAAATGTTTAT+TGG | - | chr4_4:39400170-39400189 | Msa0680370:intron | 25.0% |
| !! | TGATTTTACTTAAGATGTCA+TGG | + | chr4_4:39400509-39400528 | None:intergenic | 25.0% |
| ! | ACATGCATATCTATCTATTT+GGG | + | chr4_4:39400616-39400635 | None:intergenic | 25.0% |
| ! | TACATGCATATCTATCTATT+TGG | + | chr4_4:39400617-39400636 | None:intergenic | 25.0% |
| ! | TAAGAATTGTGATATCAATG+TGG | + | chr4_4:39400732-39400751 | None:intergenic | 25.0% |
| !! | TATCTCTATCTTTGTTTACT+AGG | + | chr4_4:39400760-39400779 | None:intergenic | 25.0% |
| ! | TAGTTTCAAAGTTTGTACAT+AGG | - | chr4_4:39400795-39400814 | Msa0680370:CDS | 25.0% |
| !!! | TCAAAGGTTTTAAAAAGTAC+AGG | - | chr4_4:39400869-39400888 | Msa0680370:CDS | 25.0% |
| !!! | GTTTTAAAAAGTACAGGAAT+AGG | - | chr4_4:39400875-39400894 | Msa0680370:CDS | 25.0% |
| !! | TGTTCTCTTTTCTTTAATTC+TGG | - | chr4_4:39400922-39400941 | Msa0680370:CDS | 25.0% |
| !! | TTACAAAGCTTTATACTGAA+GGG | + | chr4_4:39401039-39401058 | None:intergenic | 25.0% |
| !! | ATTACAAAGCTTTATACTGA+AGG | + | chr4_4:39401040-39401059 | None:intergenic | 25.0% |
| ! | TTACAACTATCCTTCTTTAT+TGG | - | chr4_4:39401175-39401194 | Msa0680370:CDS | 25.0% |
| !! | TTTGATAACAGTTTATTCCT+TGG | - | chr4_4:39401392-39401411 | Msa0680370:intron | 25.0% |
| !! | AGCAAGTTAAACGATAATTT+TGG | - | chr4_4:39401788-39401807 | Msa0680370:CDS | 25.0% |
| !! | GCAAGTTAAACGATAATTTT+GGG | - | chr4_4:39401789-39401808 | Msa0680370:CDS | 25.0% |
| CCTACTTTGTTGACAAAAAA+TGG | + | chr4_4:39396577-39396596 | None:intergenic | 30.0% | |
| !!! | CCATTTTTTGTCAACAAAGT+AGG | - | chr4_4:39396574-39396593 | Msa0680370:three_prime_UTR | 30.0% |
| ACATCGACACTTCTAATAAA+AGG | + | chr4_4:39396917-39396936 | None:intergenic | 30.0% | |
| !! | TATTAGAAGTGTCGATGTTA+CGG | - | chr4_4:39396919-39396938 | Msa0680370:three_prime_UTR | 30.0% |
| GAACTACTTGGATTTGAAAA+AGG | - | chr4_4:39396991-39397010 | Msa0680370:CDS | 30.0% | |
| GTGAAAAAGATAGAATCTCT+TGG | - | chr4_4:39397037-39397056 | Msa0680370:CDS | 30.0% | |
| GTTTGTATGAGTTCAAATTC+AGG | - | chr4_4:39397092-39397111 | Msa0680370:CDS | 30.0% | |
| !! | ATCTTGATGATCTTCCATTT+TGG | - | chr4_4:39397215-39397234 | Msa0680370:intron | 30.0% |
| !! | TCTTGATGATCTTCCATTTT+GGG | - | chr4_4:39397216-39397235 | Msa0680370:intron | 30.0% |
| GAAGATGAAAGTTTGATTCA+TGG | - | chr4_4:39397256-39397275 | Msa0680370:intron | 30.0% | |
| ATGAAAGTTTGATTCATGGT+GGG | - | chr4_4:39397260-39397279 | Msa0680370:intron | 30.0% | |
| AGCTTGATGTTCTTTACAAT+GGG | - | chr4_4:39397317-39397336 | Msa0680370:intron | 30.0% | |
| !! | GTTGTAGAAGTAAAAGCATT+TGG | - | chr4_4:39397346-39397365 | Msa0680370:intron | 30.0% |
| GTAGATATAACCAAAGATGT+TGG | - | chr4_4:39397385-39397404 | Msa0680370:intron | 30.0% | |
| AATTCACTTATTCGGTTATC+TGG | - | chr4_4:39397419-39397438 | Msa0680370:intron | 30.0% | |
| ATTACGGTTTGAGAATAGAA+TGG | - | chr4_4:39397453-39397472 | Msa0680370:intron | 30.0% | |
| TTGTGTATCGTAAAGTTCAT+TGG | - | chr4_4:39397503-39397522 | Msa0680370:intron | 30.0% | |
| CAAATATCTCGTATAAAGCA+GGG | + | chr4_4:39397581-39397600 | None:intergenic | 30.0% | |
| TCAAATATCTCGTATAAAGC+AGG | + | chr4_4:39397582-39397601 | None:intergenic | 30.0% | |
| ACAACAGCAAAAAATAAGGA+CGG | + | chr4_4:39397797-39397816 | None:intergenic | 30.0% | |
| !!! | TCCTTATTTTTTGCTGTTGT+GGG | - | chr4_4:39397797-39397816 | Msa0680370:intron | 30.0% |
| AAAACTAGAGGCTGAATATT+TGG | + | chr4_4:39397911-39397930 | None:intergenic | 30.0% | |
| GTCTAGATTTAGATTGGTAA+AGG | + | chr4_4:39398021-39398040 | None:intergenic | 30.0% | |
| ! | TTGGTAGTCTAGATTTAGAT+TGG | + | chr4_4:39398027-39398046 | None:intergenic | 30.0% |
| !! | AAGAGAAAAAAGAGTACTTC+TGG | + | chr4_4:39398063-39398082 | None:intergenic | 30.0% |
| ! | GATTTTGTACAAGATAAGAG+TGG | - | chr4_4:39398138-39398157 | Msa0680370:CDS | 30.0% |
| ! | GATTTTTGCATAAGGTGATT+CGG | - | chr4_4:39398168-39398187 | Msa0680370:CDS | 30.0% |
| ! | ATTTTTGCATAAGGTGATTC+GGG | - | chr4_4:39398169-39398188 | Msa0680370:CDS | 30.0% |
| AAGAGTAGCATAAATGTTAG+AGG | - | chr4_4:39398233-39398252 | Msa0680370:CDS | 30.0% | |
| AAGCATTTACCTATTAGACA+GGG | + | chr4_4:39398376-39398395 | None:intergenic | 30.0% | |
| GTACAGAAGTTGAAAGAATT+AGG | + | chr4_4:39398512-39398531 | None:intergenic | 30.0% | |
| CAAACACAACATTTAGTCAA+GGG | + | chr4_4:39398630-39398649 | None:intergenic | 30.0% | |
| ACAAACACAACATTTAGTCA+AGG | + | chr4_4:39398631-39398650 | None:intergenic | 30.0% | |
| CATGCATTGTATGTGTTTAA+GGG | + | chr4_4:39398677-39398696 | None:intergenic | 30.0% | |
| ACATGCATTGTATGTGTTTA+AGG | + | chr4_4:39398678-39398697 | None:intergenic | 30.0% | |
| ! | CTTTTCTCATGTTACACAAA+TGG | + | chr4_4:39398777-39398796 | None:intergenic | 30.0% |
| TATGTAAATAGGAGGATACA+AGG | - | chr4_4:39398995-39399014 | Msa0680370:intron | 30.0% | |
| ! | GATTTTACGTTCCTAATTTG+AGG | - | chr4_4:39399124-39399143 | Msa0680370:intron | 30.0% |
| ATCTAGCCCAATTCAAAATT+TGG | - | chr4_4:39399177-39399196 | Msa0680370:intron | 30.0% | |
| TCTAGCCCAATTCAAAATTT+GGG | - | chr4_4:39399178-39399197 | Msa0680370:intron | 30.0% | |
| CGATCCTTTAATATTCTTTC+TGG | + | chr4_4:39399277-39399296 | None:intergenic | 30.0% | |
| GAAAGAATATTAAAGGATCG+AGG | - | chr4_4:39399277-39399296 | Msa0680370:intron | 30.0% | |
| ! | TAGAAAAGTGCATGTTAGTA+AGG | + | chr4_4:39399628-39399647 | None:intergenic | 30.0% |
| CCTCCAATAAACATTTGAAA+TGG | + | chr4_4:39400176-39400195 | None:intergenic | 30.0% | |
| CCATTTCAAATGTTTATTGG+AGG | - | chr4_4:39400173-39400192 | Msa0680370:intron | 30.0% | |
| ! | AATTTTCATCCAATTACACC+AGG | - | chr4_4:39400214-39400233 | Msa0680370:intron | 30.0% |
| TACAAAATATACACTCTTCC+TGG | - | chr4_4:39400257-39400276 | Msa0680370:intron | 30.0% | |
| TTAAGATGTCATGGCTATTA+AGG | + | chr4_4:39400500-39400519 | None:intergenic | 30.0% | |
| ! | CTATCTTTGTTTACTAGGAT+GGG | + | chr4_4:39400755-39400774 | None:intergenic | 30.0% |
| ! | TCTATCTTTGTTTACTAGGA+TGG | + | chr4_4:39400756-39400775 | None:intergenic | 30.0% |
| TTTCAAAGTTTGTACATAGG+AGG | - | chr4_4:39400798-39400817 | Msa0680370:CDS | 30.0% | |
| TATGCTTTCTTCCTGATATT+TGG | - | chr4_4:39401217-39401236 | Msa0680370:CDS | 30.0% | |
| CAATTTGCAATCAAACATGT+TGG | + | chr4_4:39401610-39401629 | None:intergenic | 30.0% | |
| AGCAAAACCAAATTACACTT+TGG | + | chr4_4:39401664-39401683 | None:intergenic | 30.0% | |
| CTCACATTTAACTAACATCA+GGG | + | chr4_4:39401727-39401746 | None:intergenic | 30.0% | |
| ACTCACATTTAACTAACATC+AGG | + | chr4_4:39401728-39401747 | None:intergenic | 30.0% | |
| ATTGTAGAATGGTGAAGATG+AGG | + | chr4_4:39396498-39396517 | None:intergenic | 35.0% | |
| AACGGTAGAAGATTGTAGAA+TGG | + | chr4_4:39396509-39396528 | None:intergenic | 35.0% | |
| AACGTTGTAGATGTGATTTG+AGG | + | chr4_4:39396542-39396561 | None:intergenic | 35.0% | |
| TCAAATCACATCTACAACGT+TGG | - | chr4_4:39396541-39396560 | Msa0680370:three_prime_UTR | 35.0% | |
| CAAATCACATCTACAACGTT+GGG | - | chr4_4:39396542-39396561 | Msa0680370:three_prime_UTR | 35.0% | |
| AAATCACATCTACAACGTTG+GGG | - | chr4_4:39396543-39396562 | Msa0680370:three_prime_UTR | 35.0% | |
| GACTTAAATTGTAACTGACC+TGG | + | chr4_4:39396752-39396771 | None:intergenic | 35.0% | |
| TAATCACATGTGTCACATGT+CGG | - | chr4_4:39396879-39396898 | Msa0680370:three_prime_UTR | 35.0% | |
| ! | TGATGAAATTGGTGTCTTGA+AGG | - | chr4_4:39397159-39397178 | Msa0680370:CDS | 35.0% |
| GTCTTGAAGGAAGCTATAAA+CGG | - | chr4_4:39397172-39397191 | Msa0680370:CDS | 35.0% | |
| !! | CTTGATGATCTTCCATTTTG+GGG | - | chr4_4:39397217-39397236 | Msa0680370:intron | 35.0% |
| !! | TTGATGATCTTCCATTTTGG+GGG | - | chr4_4:39397218-39397237 | Msa0680370:intron | 35.0% |
| GATGAAAGTTTGATTCATGG+TGG | - | chr4_4:39397259-39397278 | Msa0680370:intron | 35.0% | |
| TGAAAGTTTGATTCATGGTG+GGG | - | chr4_4:39397261-39397280 | Msa0680370:intron | 35.0% | |
| CAAGCTGAACATGTGTAAAA+AGG | + | chr4_4:39397303-39397322 | None:intergenic | 35.0% | |
| CAGCTTGATGTTCTTTACAA+TGG | - | chr4_4:39397316-39397335 | Msa0680370:intron | 35.0% | |
| AACATCAATGCCAACATCTT+TGG | + | chr4_4:39397398-39397417 | None:intergenic | 35.0% | |
| ATTCTCAAACCGTAATTCAG+TGG | + | chr4_4:39397449-39397468 | None:intergenic | 35.0% | |
| ! | CAAAAGCAAAATGATGACGA+AGG | + | chr4_4:39397545-39397564 | None:intergenic | 35.0% |
| ! | CTTCGTCATCATTTTGCTTT+TGG | - | chr4_4:39397543-39397562 | Msa0680370:intron | 35.0% |
| TAGCGCAAATGAAGAAGATA+GGG | - | chr4_4:39397721-39397740 | Msa0680370:intron | 35.0% | |
| CAACAGCAAAAAATAAGGAC+GGG | + | chr4_4:39397796-39397815 | None:intergenic | 35.0% | |
| !!! | GTCCTTATTTTTTGCTGTTG+TGG | - | chr4_4:39397796-39397815 | Msa0680370:intron | 35.0% |
| TCCCACAACAGCAAAAAATA+AGG | + | chr4_4:39397801-39397820 | None:intergenic | 35.0% | |
| !!! | ATTTTTTGCTGTTGTGGGAA+TGG | - | chr4_4:39397802-39397821 | Msa0680370:intron | 35.0% |
| !!! | TTTTTTGCTGTTGTGGGAAT+GGG | - | chr4_4:39397803-39397822 | Msa0680370:intron | 35.0% |
| AGCTTACAAGATTAGCAGTT+GGG | + | chr4_4:39397831-39397850 | None:intergenic | 35.0% | |
| TAGCTTACAAGATTAGCAGT+TGG | + | chr4_4:39397832-39397851 | None:intergenic | 35.0% | |
| !!! | TTCAGCCTCTAGTTTTTACA+TGG | - | chr4_4:39397915-39397934 | Msa0680370:CDS | 35.0% |
| CAATGCCATGTAAAAACTAG+AGG | + | chr4_4:39397923-39397942 | None:intergenic | 35.0% | |
| AGACTACCAAGTGATAGTAA+AGG | - | chr4_4:39398037-39398056 | Msa0680370:CDS | 35.0% | |
| ! | CTCTTGATTTTTGCTTTCAC+TGG | - | chr4_4:39398078-39398097 | Msa0680370:CDS | 35.0% |
| TTACCTATTAGACAGGGTAT+TGG | + | chr4_4:39398370-39398389 | None:intergenic | 35.0% | |
| ! | GAAGCATTTACCTATTAGAC+AGG | + | chr4_4:39398377-39398396 | None:intergenic | 35.0% |
| GAAGTTGAAAGAATTAGGGT+TGG | + | chr4_4:39398507-39398526 | None:intergenic | 35.0% | |
| !! | TTGTTTTTCTCATGTCCCTT+GGG | + | chr4_4:39398881-39398900 | None:intergenic | 35.0% |
| !! | ATTGTTTTTCTCATGTCCCT+TGG | + | chr4_4:39398882-39398901 | None:intergenic | 35.0% |
| GAGTAATTAGAGTAGTTGGT+TGG | - | chr4_4:39398951-39398970 | Msa0680370:intron | 35.0% | |
| ATGAACTTTGGCCTCAAATT+AGG | + | chr4_4:39399138-39399157 | None:intergenic | 35.0% | |
| ! | AATTTGAGGCCAAAGTTCAT+TGG | - | chr4_4:39399138-39399157 | Msa0680370:intron | 35.0% |
| ! | ATTTGAGGCCAAAGTTCATT+GGG | - | chr4_4:39399139-39399158 | Msa0680370:intron | 35.0% |
| GGGTCCAGAAAGAATATTAA+AGG | - | chr4_4:39399270-39399289 | Msa0680370:intron | 35.0% | |
| AATATTAAAGGATCGAGGGA+AGG | - | chr4_4:39399282-39399301 | Msa0680370:intron | 35.0% | |
| AAGGAAGATACAAGGATAGA+GGG | - | chr4_4:39399310-39399329 | Msa0680370:intron | 35.0% | |
| TTAAAAGTAGTTAGAGCAGG+TGG | - | chr4_4:39399353-39399372 | Msa0680370:intron | 35.0% | |
| ACAGGAATCTTTGCAGAAAT+AGG | - | chr4_4:39399382-39399401 | Msa0680370:intron | 35.0% | |
| ! | ACTAACATGCACTTTTCTAC+AGG | - | chr4_4:39399629-39399648 | Msa0680370:intron | 35.0% |
| CTTCTGTTCCTAGCAATTAT+CGG | - | chr4_4:39399661-39399680 | Msa0680370:intron | 35.0% | |
| !!! | CTCTTTCATCTGTTTTTGCT+GGG | - | chr4_4:39399740-39399759 | Msa0680370:intron | 35.0% |
| AGTCAAGACAGAGAAATAGT+TGG | + | chr4_4:39399870-39399889 | None:intergenic | 35.0% | |
| ATAGAGAATGCAACAAACAC+CGG | + | chr4_4:39399942-39399961 | None:intergenic | 35.0% | |
| !! | GAGTAATTGGATATCGGTTT+AGG | - | chr4_4:39400075-39400094 | Msa0680370:intron | 35.0% |
| !!! | ATTGGAGGTTTTGTTCCTTT+TGG | - | chr4_4:39400188-39400207 | Msa0680370:intron | 35.0% |
| TGGATGAAAATTGCACCAAA+AGG | + | chr4_4:39400206-39400225 | None:intergenic | 35.0% | |
| GACATATGTTCAACTATCTG+TGG | - | chr4_4:39400340-39400359 | Msa0680370:intron | 35.0% | |
| TATGCATGTAACTGATCTTG+TGG | - | chr4_4:39400627-39400646 | Msa0680370:intron | 35.0% | |
| ! | TGATCTTGTGGTTTTCTGTA+GGG | - | chr4_4:39400639-39400658 | Msa0680370:intron | 35.0% |
| AATGTGGATATTAAGCCATG+AGG | + | chr4_4:39400716-39400735 | None:intergenic | 35.0% | |
| !! | TCAACAGCCATTTTCATGTT+TGG | - | chr4_4:39401109-39401128 | Msa0680370:CDS | 35.0% |
| !! | GCCATTTTCATGTTTGGTTA+CGG | - | chr4_4:39401115-39401134 | Msa0680370:CDS | 35.0% |
| ACCGTAACCAAACATGAAAA+TGG | + | chr4_4:39401119-39401138 | None:intergenic | 35.0% | |
| TATGCAAGATCAAGAATGAG+CGG | - | chr4_4:39401148-39401167 | Msa0680370:CDS | 35.0% | |
| !! | CAAAGAAACTCTGAAACTGA+TGG | + | chr4_4:39401245-39401264 | None:intergenic | 35.0% |
| ! | CTCACTCTCTTTTGACATTA+TGG | + | chr4_4:39401288-39401307 | None:intergenic | 35.0% |
| TCTCAAGCACAAAGTAACAT+TGG | - | chr4_4:39401317-39401336 | Msa0680370:intron | 35.0% | |
| GATTGATGAACTCTTCTCTT+TGG | - | chr4_4:39401351-39401370 | Msa0680370:intron | 35.0% | |
| CTTGTTGAAGAATTCAACCA+AGG | + | chr4_4:39401412-39401431 | None:intergenic | 35.0% | |
| CTTGGTTGAATTCTTCAACA+AGG | - | chr4_4:39401410-39401429 | Msa0680370:intron | 35.0% | |
| CTGAATCAAGACTAAATCCA+TGG | - | chr4_4:39401471-39401490 | Msa0680370:intron | 35.0% | |
| AGAAAGGAGTGGAATTATAG+AGG | - | chr4_4:39401522-39401541 | Msa0680370:intron | 35.0% | |
| GAAAGGAGTGGAATTATAGA+GGG | - | chr4_4:39401523-39401542 | Msa0680370:intron | 35.0% | |
| ! | AACCAAATTACACTTTGGAG+TGG | + | chr4_4:39401659-39401678 | None:intergenic | 35.0% |
| !! | ATTTGAGGTTGATGCGGTAA+CGG | + | chr4_4:39396527-39396546 | None:intergenic | 40.0% |
| !! | GATGTGATTTGAGGTTGATG+CGG | + | chr4_4:39396533-39396552 | None:intergenic | 40.0% |
| GTGAAGAGAATTGTTGACCT+GGG | + | chr4_4:39396613-39396632 | None:intergenic | 40.0% | |
| GAATTACCATTCTGCAAACC+AGG | - | chr4_4:39396731-39396750 | Msa0680370:three_prime_UTR | 40.0% | |
| ACCAAAATCAGTGTCGTATC+CGG | + | chr4_4:39396829-39396848 | None:intergenic | 40.0% | |
| ! | CTTCTAATAAAAGGCGTGTC+CGG | + | chr4_4:39396908-39396927 | None:intergenic | 40.0% |
| GGGGTTTAATTGGAACTACT+TGG | - | chr4_4:39396979-39396998 | Msa0680370:exon | 40.0% | |
| TCTCTTGGAGAAGTTCTCAA+TGG | - | chr4_4:39397052-39397071 | Msa0680370:CDS | 40.0% | |
| AATGGTGATCGTTTGAGCAA+TGG | - | chr4_4:39397070-39397089 | Msa0680370:CDS | 40.0% | |
| GAAAGTTTGATTCATGGTGG+GGG | - | chr4_4:39397262-39397281 | Msa0680370:intron | 40.0% | |
| GTTATATCTACAGCGCGATT+TGG | + | chr4_4:39397376-39397395 | None:intergenic | 40.0% | |
| ! | TCTGGAATGCCACTGAATTA+CGG | - | chr4_4:39397437-39397456 | Msa0680370:intron | 40.0% |
| CTAGCGCAAATGAAGAAGAT+AGG | - | chr4_4:39397720-39397739 | Msa0680370:intron | 40.0% | |
| AATGAAGAAGATAGGGAGGT+TGG | - | chr4_4:39397728-39397747 | Msa0680370:intron | 40.0% | |
| ! | TTCTGGCCTTTACTATCACT+TGG | + | chr4_4:39398046-39398065 | None:intergenic | 40.0% |
| ! | CACTGGTCTGTTCTTATGTA+TGG | - | chr4_4:39398095-39398114 | Msa0680370:CDS | 40.0% |
| GTCTGTTCTTATGTATGGTG+TGG | - | chr4_4:39398100-39398119 | Msa0680370:CDS | 40.0% | |
| TTGTACAAGATAAGAGTGGG+TGG | - | chr4_4:39398142-39398161 | Msa0680370:CDS | 40.0% | |
| ! | GGTGGTAGGATTTTTGCATA+AGG | - | chr4_4:39398160-39398179 | Msa0680370:CDS | 40.0% |
| !! | TTAGACAGGGTATTGGCTTA+TGG | + | chr4_4:39398363-39398382 | None:intergenic | 40.0% |
| AAGCCAATACCCTGTCTAAT+AGG | - | chr4_4:39398364-39398383 | Msa0680370:CDS | 40.0% | |
| CAAGTAACAAAGTCTGTCAC+TGG | + | chr4_4:39398411-39398430 | None:intergenic | 40.0% | |
| TATTCCATGGCAAAGATACC+AGG | + | chr4_4:39398541-39398560 | None:intergenic | 40.0% | |
| TGGGGGACATCTGATAAAAT+TGG | + | chr4_4:39398862-39398881 | None:intergenic | 40.0% | |
| ! | ATTTTATCAGATGTCCCCCA+AGG | - | chr4_4:39398862-39398881 | Msa0680370:intron | 40.0% |
| ! | TTTTATCAGATGTCCCCCAA+GGG | - | chr4_4:39398863-39398882 | Msa0680370:intron | 40.0% |
| ! | TGTTTTTCTCATGTCCCTTG+GGG | + | chr4_4:39398880-39398899 | None:intergenic | 40.0% |
| ! | AGAGTAGTTGGTTGGTTAGT+CGG | - | chr4_4:39398959-39398978 | Msa0680370:intron | 40.0% |
| ! | AATTGGGCTAGATGTACCTT+GGG | + | chr4_4:39399170-39399189 | None:intergenic | 40.0% |
| !! | AGGCATTGAAGGAAGATACA+AGG | - | chr4_4:39399302-39399321 | Msa0680370:intron | 40.0% |
| GAAGGAAGATACAAGGATAG+AGG | - | chr4_4:39399309-39399328 | Msa0680370:intron | 40.0% | |
| AAGATACAAGGATAGAGGGA+AGG | - | chr4_4:39399314-39399333 | Msa0680370:intron | 40.0% | |
| GGAATCTTTGCAGAAATAGG+AGG | - | chr4_4:39399385-39399404 | Msa0680370:intron | 40.0% | |
| TGCAGAAATAGGAGGATACA+AGG | - | chr4_4:39399393-39399412 | Msa0680370:intron | 40.0% | |
| ATAGGAGGATACAAGGATAG+AGG | - | chr4_4:39399400-39399419 | Msa0680370:intron | 40.0% | |
| TAGGAGGATACAAGGATAGA+GGG | - | chr4_4:39399401-39399420 | Msa0680370:intron | 40.0% | |
| TTGTAGAGGAGGAAACTCTT+GGG | - | chr4_4:39399472-39399491 | Msa0680370:intron | 40.0% | |
| CGATAATTGCTAGGAACAGA+AGG | + | chr4_4:39399663-39399682 | None:intergenic | 40.0% | |
| ACCATGACTGTATGGATAGA+GGG | + | chr4_4:39399689-39399708 | None:intergenic | 40.0% | |
| CAGATGAAAGAGCGAATAGA+AGG | + | chr4_4:39399732-39399751 | None:intergenic | 40.0% | |
| !!! | GCTCTTTCATCTGTTTTTGC+TGG | - | chr4_4:39399739-39399758 | Msa0680370:intron | 40.0% |
| !! | CCAATTTGCTGAGAATGGAT+GGG | - | chr4_4:39399786-39399805 | Msa0680370:intron | 40.0% |
| !! | AGAAGAGTGTTAGTCTAGCT+GGG | - | chr4_4:39399901-39399920 | Msa0680370:intron | 40.0% |
| CTAGCTGGGATTCTTTACAT+TGG | - | chr4_4:39399915-39399934 | Msa0680370:intron | 40.0% | |
| TGGGATTCTTTACATTGGTC+CGG | - | chr4_4:39399920-39399939 | Msa0680370:intron | 40.0% | |
| TCACGATAATAGAGCCCAAT+GGG | + | chr4_4:39400007-39400026 | None:intergenic | 40.0% | |
| ATCACGATAATAGAGCCCAA+TGG | + | chr4_4:39400008-39400027 | None:intergenic | 40.0% | |
| TCGATCCCATTACTTGCATT+CGG | - | chr4_4:39400050-39400069 | Msa0680370:intron | 40.0% | |
| GATATCTCTTTGTACCCAAG+GGG | + | chr4_4:39400115-39400134 | None:intergenic | 40.0% | |
| GGATATCTCTTTGTACCCAA+GGG | + | chr4_4:39400116-39400135 | None:intergenic | 40.0% | |
| GGAAGCTGTTGAATCTCTTT+CGG | + | chr4_4:39400137-39400156 | None:intergenic | 40.0% | |
| AAGAGATTCAACAGCTTCCT+TGG | - | chr4_4:39400138-39400157 | Msa0680370:intron | 40.0% | |
| ! | ATACACTCTTCCTGGCATTT+TGG | - | chr4_4:39400265-39400284 | Msa0680370:intron | 40.0% |
| ATTGTTGCGCTCGTAAATGT+TGG | - | chr4_4:39400314-39400333 | Msa0680370:intron | 40.0% | |
| TATCTGTGGAAGACCATGAA+TGG | - | chr4_4:39400354-39400373 | Msa0680370:intron | 40.0% | |
| GATGTCAGATACTACACTAG+AGG | + | chr4_4:39400582-39400601 | None:intergenic | 40.0% | |
| ! | CTGATCTTGTGGTTTTCTGT+AGG | - | chr4_4:39400638-39400657 | Msa0680370:intron | 40.0% |
| ! | GATCTTGTGGTTTTCTGTAG+GGG | - | chr4_4:39400640-39400659 | Msa0680370:intron | 40.0% |
| GAGGATGAATCAGATTACCA+GGG | + | chr4_4:39400697-39400716 | None:intergenic | 40.0% | |
| TGAGGATGAATCAGATTACC+AGG | + | chr4_4:39400698-39400717 | None:intergenic | 40.0% | |
| GGTAATCTGATTCATCCTCA+TGG | - | chr4_4:39400698-39400717 | Msa0680370:CDS | 40.0% | |
| AACTGATGGCACCAAATATC+AGG | + | chr4_4:39401231-39401250 | None:intergenic | 40.0% | |
| CACAGTTTGGAAGAGCTTTA+CGG | - | chr4_4:39401497-39401516 | Msa0680370:intron | 40.0% | |
| ACAGTTTGGAAGAGCTTTAC+GGG | - | chr4_4:39401498-39401517 | Msa0680370:intron | 40.0% | |
| AGAGGGTAGGTTGTTAGAAT+TGG | - | chr4_4:39401540-39401559 | Msa0680370:intron | 40.0% | |
| GGTTGTTAGAATTGGAGATC+AGG | - | chr4_4:39401548-39401567 | Msa0680370:intron | 40.0% | |
| GACCACTCCAAAGTGTAATT+TGG | - | chr4_4:39401654-39401673 | Msa0680370:intron | 40.0% | |
| AGAAGGAGAATGAGGTGATG+GGG | + | chr4_4:39396475-39396494 | None:intergenic | 45.0% | |
| GAGAAGGAGAATGAGGTGAT+GGG | + | chr4_4:39396476-39396495 | None:intergenic | 45.0% | |
| AGATGAGGAGAAGGAGAATG+AGG | + | chr4_4:39396483-39396502 | None:intergenic | 45.0% | |
| GAATGGTGAAGATGAGGAGA+AGG | + | chr4_4:39396492-39396511 | None:intergenic | 45.0% | |
| GTTGACCTGGGATTGTTGAA+GGG | + | chr4_4:39396601-39396620 | None:intergenic | 45.0% | |
| TGTTGACCTGGGATTGTTGA+AGG | + | chr4_4:39396602-39396621 | None:intergenic | 45.0% | |
| GGTGAAGAGAATTGTTGACC+TGG | + | chr4_4:39396614-39396633 | None:intergenic | 45.0% | |
| ! | AACTGACCTGGTTTGCAGAA+TGG | + | chr4_4:39396740-39396759 | None:intergenic | 45.0% |
| TGAAGCACAGACACATACAC+CGG | - | chr4_4:39396807-39396826 | Msa0680370:three_prime_UTR | 45.0% | |
| !!! | ACCGGATACGACACTGATTT+TGG | - | chr4_4:39396825-39396844 | Msa0680370:three_prime_UTR | 45.0% |
| !! | TTCCATTTTGGGGGTTCGTT+GGG | - | chr4_4:39397227-39397246 | Msa0680370:intron | 45.0% |
| CGCAAATGAAGAAGATAGGG+AGG | - | chr4_4:39397724-39397743 | Msa0680370:intron | 45.0% | |
| ! | AAGAAGATAGGGAGGTTGGT+TGG | - | chr4_4:39397732-39397751 | Msa0680370:intron | 45.0% |
| GTTGGTTGGAAGTCAATCCA+TGG | - | chr4_4:39397746-39397765 | Msa0680370:intron | 45.0% | |
| GAGGCTTGAATACATCACCA+TGG | + | chr4_4:39397766-39397785 | None:intergenic | 45.0% | |
| GCAAAAAATAAGGACGGGTG+CGG | + | chr4_4:39397791-39397810 | None:intergenic | 45.0% | |
| ACAAGATAAGAGTGGGTGGT+AGG | - | chr4_4:39398146-39398165 | Msa0680370:CDS | 45.0% | |
| TTATCATTGCCCCCTAGACA+AGG | + | chr4_4:39398823-39398842 | None:intergenic | 45.0% | |
| ! | GTTTTTCTCATGTCCCTTGG+GGG | + | chr4_4:39398879-39398898 | None:intergenic | 45.0% |
| ATAGGAGGATACAAGGACTG+AGG | - | chr4_4:39399002-39399021 | Msa0680370:intron | 45.0% | |
| TAGGAGGATACAAGGACTGA+GGG | - | chr4_4:39399003-39399022 | Msa0680370:intron | 45.0% | |
| AGCAGTGACTCTGTTGTAGA+AGG | - | chr4_4:39399059-39399078 | Msa0680370:intron | 45.0% | |
| GCAGTGACTCTGTTGTAGAA+GGG | - | chr4_4:39399060-39399079 | Msa0680370:intron | 45.0% | |
| CAGTGACTCTGTTGTAGAAG+GGG | - | chr4_4:39399061-39399080 | Msa0680370:intron | 45.0% | |
| GTTGTAGAAGGGGAAATCCT+TGG | - | chr4_4:39399071-39399090 | Msa0680370:intron | 45.0% | |
| ! | GAATTGGGCTAGATGTACCT+TGG | + | chr4_4:39399171-39399190 | None:intergenic | 45.0% |
| !! | AAGTGCTGTGGAAAAGTGCT+GGG | - | chr4_4:39399210-39399229 | Msa0680370:intron | 45.0% |
| !!! | GTGGAAAAGTGCTGGGTTTT+TGG | - | chr4_4:39399217-39399236 | Msa0680370:intron | 45.0% |
| ! | AGCAGAAAAGTGCAGATCGA+AGG | - | chr4_4:39399247-39399266 | Msa0680370:intron | 45.0% |
| ! | GCAGAAAAGTGCAGATCGAA+GGG | - | chr4_4:39399248-39399267 | Msa0680370:intron | 45.0% |
| ! | CAGAAAAGTGCAGATCGAAG+GGG | - | chr4_4:39399249-39399268 | Msa0680370:intron | 45.0% |
| ! | AGAAAAGTGCAGATCGAAGG+GGG | - | chr4_4:39399250-39399269 | Msa0680370:intron | 45.0% |
| ! | TAGAGCAGGTGGTTAGTTAC+AGG | - | chr4_4:39399364-39399383 | Msa0680370:intron | 45.0% |
| AGGATACAAGGATAGAGGGA+AGG | - | chr4_4:39399405-39399424 | Msa0680370:intron | 45.0% | |
| GTTGTAGAGGAGGAAACTCT+TGG | - | chr4_4:39399471-39399490 | Msa0680370:intron | 45.0% | |
| TGTAGAGGAGGAAACTCTTG+GGG | - | chr4_4:39399473-39399492 | Msa0680370:intron | 45.0% | |
| !! | AGAGGGTACCGATAATTGCT+AGG | + | chr4_4:39399672-39399691 | None:intergenic | 45.0% |
| ACCCTCTATCCATACAGTCA+TGG | - | chr4_4:39399685-39399704 | Msa0680370:intron | 45.0% | |
| CACCATGACTGTATGGATAG+AGG | + | chr4_4:39399690-39399709 | None:intergenic | 45.0% | |
| CTCTATCCATACAGTCATGG+TGG | - | chr4_4:39399688-39399707 | Msa0680370:intron | 45.0% | |
| GAATAGAAGGACAAGCCAAC+TGG | + | chr4_4:39399719-39399738 | None:intergenic | 45.0% | |
| TACTCAACAGCATCCTTCCA+TGG | - | chr4_4:39399763-39399782 | Msa0680370:intron | 45.0% | |
| CATTCTCAGCAAATTGGCCA+TGG | + | chr4_4:39399783-39399802 | None:intergenic | 45.0% | |
| !! | CATGGCCAATTTGCTGAGAA+TGG | - | chr4_4:39399781-39399800 | Msa0680370:intron | 45.0% |
| !! | GCCAATTTGCTGAGAATGGA+TGG | - | chr4_4:39399785-39399804 | Msa0680370:intron | 45.0% |
| CCCATCCATTCTCAGCAAAT+TGG | + | chr4_4:39399789-39399808 | None:intergenic | 45.0% | |
| TCTGTCTTGACTATGACTCC+AGG | - | chr4_4:39399878-39399897 | Msa0680370:intron | 45.0% | |
| CTAGACTAACACTCTTCTCC+TGG | + | chr4_4:39399899-39399918 | None:intergenic | 45.0% | |
| !! | GAGAAGAGTGTTAGTCTAGC+TGG | - | chr4_4:39399900-39399919 | Msa0680370:intron | 45.0% |
| ATATCTTACAGGGTCACAGC+TGG | - | chr4_4:39399978-39399997 | Msa0680370:intron | 45.0% | |
| CGATCCCATTACTTGCATTC+GGG | - | chr4_4:39400051-39400070 | Msa0680370:intron | 45.0% | |
| GATCCCATTACTTGCATTCG+GGG | - | chr4_4:39400052-39400071 | Msa0680370:intron | 45.0% | |
| ATCCCATTACTTGCATTCGG+GGG | - | chr4_4:39400053-39400072 | Msa0680370:intron | 45.0% | |
| TCGGGGGAGTAATTGGATAT+CGG | - | chr4_4:39400069-39400088 | Msa0680370:intron | 45.0% | |
| TCGGTTTAGGTCCAAGTTTC+AGG | - | chr4_4:39400088-39400107 | Msa0680370:intron | 45.0% | |
| CGGATATCTCTTTGTACCCA+AGG | + | chr4_4:39400117-39400136 | None:intergenic | 45.0% | |
| TTCAACAGCTTCCTTGGTAC+AGG | - | chr4_4:39400144-39400163 | Msa0680370:intron | 45.0% | |
| AATGGTGTTCTCCTGTACCA+AGG | + | chr4_4:39400158-39400177 | None:intergenic | 45.0% | |
| TAGCGTACACCTGGTGTAAT+TGG | + | chr4_4:39400226-39400245 | None:intergenic | 45.0% | |
| TACTTCTCCTGAGATCAGGA+GGG | + | chr4_4:39400672-39400691 | None:intergenic | 45.0% | |
| TTACTTCTCCTGAGATCAGG+AGG | + | chr4_4:39400673-39400692 | None:intergenic | 45.0% | |
| GAAAAGAGAACACAGTGCAG+AGG | + | chr4_4:39400914-39400933 | None:intergenic | 45.0% | |
| CGCACTGTAGCCAATAAAGA+AGG | + | chr4_4:39401188-39401207 | None:intergenic | 45.0% | |
| AAATCCATGGCTGCACAGTT+TGG | - | chr4_4:39401484-39401503 | Msa0680370:intron | 45.0% | |
| GAAGAGCTTTACGGGAAGAA+AGG | - | chr4_4:39401506-39401525 | Msa0680370:intron | 45.0% | |
| GGAGTGGAATTATAGAGGGT+AGG | - | chr4_4:39401527-39401546 | Msa0680370:intron | 45.0% | |
| GGTGAATTAATTAAGCCCCC+TGG | - | chr4_4:39401569-39401588 | Msa0680370:intron | 45.0% | |
| CAACCTCATAAACAACCAGG+GGG | + | chr4_4:39401587-39401606 | None:intergenic | 45.0% | |
| GCAACCTCATAAACAACCAG+GGG | + | chr4_4:39401588-39401607 | None:intergenic | 45.0% | |
| GGCAACCTCATAAACAACCA+GGG | + | chr4_4:39401589-39401608 | None:intergenic | 45.0% | |
| TGGCAACCTCATAAACAACC+AGG | + | chr4_4:39401590-39401609 | None:intergenic | 45.0% | |
| GGTCATTAGACACACGATTG+AGG | + | chr4_4:39401638-39401657 | None:intergenic | 45.0% | |
| GGAGAAGGAGAATGAGGTGA+TGG | + | chr4_4:39396477-39396496 | None:intergenic | 50.0% | |
| TAGGTCCCTTCAACAATCCC+AGG | - | chr4_4:39396593-39396612 | Msa0680370:three_prime_UTR | 50.0% | |
| ATGTGTCACATGTCGGACAC+CGG | - | chr4_4:39396886-39396905 | Msa0680370:three_prime_UTR | 50.0% | |
| !! | CTTCCATTTTGGGGGTTCGT+TGG | - | chr4_4:39397226-39397245 | Msa0680370:intron | 50.0% |
| TTCCCAACGAACCCCCAAAA+TGG | + | chr4_4:39397232-39397251 | None:intergenic | 50.0% | |
| ! | AGTTTGATTCATGGTGGGGG+AGG | - | chr4_4:39397265-39397284 | Msa0680370:intron | 50.0% |
| AAAAATAAGGACGGGTGCGG+AGG | + | chr4_4:39397788-39397807 | None:intergenic | 50.0% | |
| GACAAGGACGACACGCAATT+GGG | + | chr4_4:39398807-39398826 | None:intergenic | 50.0% | |
| AGACAAGGACGACACGCAAT+TGG | + | chr4_4:39398808-39398827 | None:intergenic | 50.0% | |
| ATTGCGTGTCGTCCTTGTCT+AGG | - | chr4_4:39398808-39398827 | Msa0680370:intron | 50.0% | |
| TTGCGTGTCGTCCTTGTCTA+GGG | - | chr4_4:39398809-39398828 | Msa0680370:intron | 50.0% | |
| ! | TTGGTTGGTTAGTCGGTCAG+AGG | - | chr4_4:39398966-39398985 | Msa0680370:intron | 50.0% |
| GAAGGGGAAATCCTTGGAGT+TGG | - | chr4_4:39399077-39399096 | Msa0680370:intron | 50.0% | |
| !! | TCCTTGGAGTTGGTATCTGC+TGG | - | chr4_4:39399087-39399106 | Msa0680370:intron | 50.0% |
| TCCAGCAGATACCAACTCCA+AGG | + | chr4_4:39399091-39399110 | None:intergenic | 50.0% | |
| ATCTGCTGGAGTCGAGAACA+AGG | - | chr4_4:39399101-39399120 | Msa0680370:intron | 50.0% | |
| TCTGCTGGAGTCGAGAACAA+GGG | - | chr4_4:39399102-39399121 | Msa0680370:intron | 50.0% | |
| GGGTTAGGCCCAATGAACTT+TGG | + | chr4_4:39399150-39399169 | None:intergenic | 50.0% | |
| AGTTCATTGGGCCTAACCCA+AGG | - | chr4_4:39399151-39399170 | Msa0680370:intron | 50.0% | |
| GGCTAGATGTACCTTGGGTT+AGG | + | chr4_4:39399165-39399184 | None:intergenic | 50.0% | |
| !! | GGGTTTTTGCTCAAGTGCTG+TGG | - | chr4_4:39399198-39399217 | Msa0680370:intron | 50.0% |
| ! | CAAGTGCTGTGGAAAAGTGC+TGG | - | chr4_4:39399209-39399228 | Msa0680370:intron | 50.0% |
| GCAGTGTGACTCTGTTGTAG+AGG | - | chr4_4:39399458-39399477 | Msa0680370:intron | 50.0% | |
| GTGTGACTCTGTTGTAGAGG+AGG | - | chr4_4:39399461-39399480 | Msa0680370:intron | 50.0% | |
| GAGAGTCCACCATGACTGTA+TGG | + | chr4_4:39399697-39399716 | None:intergenic | 50.0% | |
| CTCAGCAAATTGGCCATGGA+AGG | + | chr4_4:39399779-39399798 | None:intergenic | 50.0% | |
| CTCCCCCGAATGCAAGTAAT+GGG | + | chr4_4:39400058-39400077 | None:intergenic | 50.0% | |
| ACTCCCCCGAATGCAAGTAA+TGG | + | chr4_4:39400059-39400078 | None:intergenic | 50.0% | |
| CTTGCATTCGGGGGAGTAAT+TGG | - | chr4_4:39400062-39400081 | Msa0680370:intron | 50.0% | |
| ! | TCCAAGTTTCAGGTCCCCTT+GGG | - | chr4_4:39400098-39400117 | Msa0680370:intron | 50.0% |
| ! | ACCAGGTGTACGCTAGTTTG+TGG | - | chr4_4:39400231-39400250 | Msa0680370:intron | 50.0% |
| ! | CCAGGTGTACGCTAGTTTGT+GGG | - | chr4_4:39400232-39400251 | Msa0680370:intron | 50.0% |
| ! | CAGGTGTACGCTAGTTTGTG+GGG | - | chr4_4:39400233-39400252 | Msa0680370:intron | 50.0% |
| CTGTGGAAGACCATGAATGG+TGG | - | chr4_4:39400357-39400376 | Msa0680370:intron | 50.0% | |
| TGGAAGACCATGAATGGTGG+TGG | - | chr4_4:39400360-39400379 | Msa0680370:intron | 50.0% | |
| !! | AAGACCATGAATGGTGGTGG+AGG | - | chr4_4:39400363-39400382 | Msa0680370:intron | 50.0% |
| CATACCTCCACCACCATTCA+TGG | + | chr4_4:39400370-39400389 | None:intergenic | 50.0% | |
| GTCTTAACCCTCCTGATCTC+AGG | - | chr4_4:39400662-39400681 | Msa0680370:intron | 50.0% | |
| GGCTTACTTCTCCTGAGATC+AGG | + | chr4_4:39400676-39400695 | None:intergenic | 50.0% | |
| ATCTCAGGAGAAGTAAGCCC+TGG | - | chr4_4:39400677-39400696 | Msa0680370:CDS | 50.0% | |
| ACACAGTGCAGAGGTCAACA+AGG | + | chr4_4:39400905-39400924 | None:intergenic | 50.0% | |
| TCTTCCAAACTGTGCAGCCA+TGG | + | chr4_4:39401491-39401510 | None:intergenic | 50.0% | |
| GCTTTACGGGAAGAAAGGAG+TGG | - | chr4_4:39401511-39401530 | Msa0680370:intron | 50.0% | |
| AAGCCCCCTGGTTGTTTATG+AGG | - | chr4_4:39401581-39401600 | Msa0680370:intron | 50.0% | |
| CAACTTCTGTACTGCCTGCC+TGG | - | chr4_4:39398520-39398539 | Msa0680370:CDS | 55.0% | |
| CCATGGCAAAGATACCAGGC+AGG | + | chr4_4:39398537-39398556 | None:intergenic | 55.0% | |
| CCTGCCTGGTATCTTTGCCA+TGG | - | chr4_4:39398534-39398553 | Msa0680370:CDS | 55.0% | |
| TGCGTGTCGTCCTTGTCTAG+GGG | - | chr4_4:39398810-39398829 | Msa0680370:intron | 55.0% | |
| !! | GGATCGAGGGAAGGCATTGA+AGG | - | chr4_4:39399291-39399310 | Msa0680370:intron | 55.0% |
| GAGGAGGAAACTCTTGGGGT+TGG | - | chr4_4:39399477-39399496 | Msa0680370:intron | 55.0% | |
| GAGGAAACTCTTGGGGTTGG+AGG | - | chr4_4:39399480-39399499 | Msa0680370:intron | 55.0% | |
| !! | GTCATGGTGGACTCTCCAGT+TGG | - | chr4_4:39399701-39399720 | Msa0680370:intron | 55.0% |
| GTCACAGCTGGACTCCCATT+GGG | - | chr4_4:39399990-39400009 | Msa0680370:intron | 55.0% | |
| ! | GTCCAAGTTTCAGGTCCCCT+TGG | - | chr4_4:39400097-39400116 | Msa0680370:intron | 55.0% |
| ACCCAAGGGGACCTGAAACT+TGG | + | chr4_4:39400102-39400121 | None:intergenic | 55.0% | |
| CCCACAAACTAGCGTACACC+TGG | + | chr4_4:39400235-39400254 | None:intergenic | 55.0% | |
| AGTGTCGCAGCCAAAATGCC+AGG | + | chr4_4:39400278-39400297 | None:intergenic | 55.0% | |
| GTGTGCAGATCTGTGCTGTG+TGG | - | chr4_4:39401082-39401101 | Msa0680370:CDS | 55.0% | |
| TGCAGATCTGTGCTGTGTGG+TGG | - | chr4_4:39401085-39401104 | Msa0680370:CDS | 55.0% | |
| AATAAGGACGGGTGCGGAGG+AGG | + | chr4_4:39397785-39397804 | None:intergenic | 60.0% | |
| GCGTGTCGTCCTTGTCTAGG+GGG | - | chr4_4:39398811-39398830 | Msa0680370:intron | 60.0% | |
| GGTCACAGCTGGACTCCCAT+TGG | - | chr4_4:39399989-39400008 | Msa0680370:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 39396463 | 39401829 | 39396463 | ID=Msa0680370;Name=Msa0680370 |
| chr4_4 | mRNA | 39396463 | 39401829 | 39396463 | ID=Msa0680370-mRNA-1;Parent=Msa0680370;Name=Msa0680370-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.8|0.83|1|1|1|6|523|569 |
| chr4_4 | exon | 39396463 | 39397202 | 39396463 | ID=Msa0680370-mRNA-1:exon:9326;Parent=Msa0680370-mRNA-1 |
| chr4_4 | exon | 39397908 | 39398392 | 39397908 | ID=Msa0680370-mRNA-1:exon:9325;Parent=Msa0680370-mRNA-1 |
| chr4_4 | exon | 39398485 | 39398641 | 39398485 | ID=Msa0680370-mRNA-1:exon:9324;Parent=Msa0680370-mRNA-1 |
| chr4_4 | exon | 39400449 | 39400577 | 39400449 | ID=Msa0680370-mRNA-1:exon:9323;Parent=Msa0680370-mRNA-1 |
| chr4_4 | exon | 39400675 | 39401263 | 39400675 | ID=Msa0680370-mRNA-1:exon:9322;Parent=Msa0680370-mRNA-1 |
| chr4_4 | exon | 39401697 | 39401829 | 39401697 | ID=Msa0680370-mRNA-1:exon:9321;Parent=Msa0680370-mRNA-1 |
| chr4_4 | CDS | 39401697 | 39401829 | 39401697 | ID=Msa0680370-mRNA-1:cds;Parent=Msa0680370-mRNA-1 |
| chr4_4 | CDS | 39400675 | 39401263 | 39400675 | ID=Msa0680370-mRNA-1:cds;Parent=Msa0680370-mRNA-1 |
| chr4_4 | CDS | 39400449 | 39400577 | 39400449 | ID=Msa0680370-mRNA-1:cds;Parent=Msa0680370-mRNA-1 |
| chr4_4 | CDS | 39398485 | 39398641 | 39398485 | ID=Msa0680370-mRNA-1:cds;Parent=Msa0680370-mRNA-1 |
| chr4_4 | CDS | 39397908 | 39398392 | 39397908 | ID=Msa0680370-mRNA-1:cds;Parent=Msa0680370-mRNA-1 |
| chr4_4 | CDS | 39396986 | 39397202 | 39396986 | ID=Msa0680370-mRNA-1:cds;Parent=Msa0680370-mRNA-1 |
| chr4_4 | three_prime_UTR | 39396463 | 39396985 | 39396463 | ID=Msa0680370-mRNA-1:three_prime_utr;Parent=Msa0680370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
