Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024090 | XP_003625195.1 | 88.211 | 246 | 26 | 2 | 376 | 618 | 1 | 246 | 6.72e-151 | 445 |
| Msa1024090 | XP_003625195.1 | 88.835 | 206 | 21 | 1 | 129 | 332 | 1 | 206 | 6.42e-126 | 381 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024090 | sp|Q9LSS3|SEN22_ARATH | 55.785 | 242 | 94 | 3 | 376 | 615 | 1 | 231 | 2.49e-77 | 249 |
| Msa1024090 | sp|Q9LSS3|SEN22_ARATH | 54.412 | 204 | 81 | 3 | 129 | 332 | 1 | 192 | 3.17e-62 | 209 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024090 | A2Q3E8 | 88.211 | 246 | 26 | 2 | 376 | 618 | 1 | 246 | 3.21e-151 | 445 |
| Msa1024090 | A2Q3E8 | 88.835 | 206 | 21 | 1 | 129 | 332 | 1 | 206 | 3.07e-126 | 381 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002560 | Msa1024090 | 0.800280 | 1.551765e-48 | -8.615850e-47 |
| Msa0014710 | Msa1024090 | 0.808510 | 2.989523e-50 | -8.615850e-47 |
| Msa0026910 | Msa1024090 | 0.808343 | 3.244366e-50 | -8.615850e-47 |
| Msa0031180 | Msa1024090 | 0.805335 | 1.403210e-49 | -8.615850e-47 |
| Msa0031340 | Msa1024090 | 0.801889 | 7.277465e-49 | -8.615850e-47 |
| Msa0032110 | Msa1024090 | 0.800881 | 1.170635e-48 | -8.615850e-47 |
| Msa0045790 | Msa1024090 | 0.809990 | 1.440120e-50 | -8.615850e-47 |
| Msa0046100 | Msa1024090 | 0.810013 | 1.423133e-50 | -8.615850e-47 |
| Msa0046160 | Msa1024090 | 0.810990 | 8.758510e-51 | -8.615850e-47 |
| Msa0048000 | Msa1024090 | 0.816221 | 6.182987e-52 | -8.615850e-47 |
| Msa0068430 | Msa1024090 | 0.804248 | 2.366694e-49 | -8.615850e-47 |
| Msa0068680 | Msa1024090 | 0.835622 | 1.507502e-56 | -8.615850e-47 |
| Msa0102270 | Msa1024090 | 0.814158 | 1.776743e-51 | -8.615850e-47 |
| Msa0116080 | Msa1024090 | 0.816273 | 6.020785e-52 | -8.615850e-47 |
| Msa0613090 | Msa1024090 | 0.816705 | 4.818640e-52 | -8.615850e-47 |
| Msa0626220 | Msa1024090 | 0.821685 | 3.540539e-53 | -8.615850e-47 |
| Msa0638070 | Msa1024090 | 0.810812 | 9.570829e-51 | -8.615850e-47 |
| Msa0663250 | Msa1024090 | 0.829723 | 4.389108e-55 | -8.615850e-47 |
| Msa0667050 | Msa1024090 | 0.826554 | 2.545592e-54 | -8.615850e-47 |
| Msa0677080 | Msa1024090 | 0.809414 | 1.914800e-50 | -8.615850e-47 |
| Msa0682550 | Msa1024090 | 0.818154 | 2.273504e-52 | -8.615850e-47 |
| Msa0688480 | Msa1024090 | 0.814599 | 1.419214e-51 | -8.615850e-47 |
| Msa0693380 | Msa1024090 | 0.827831 | 1.258855e-54 | -8.615850e-47 |
| Msa0740510 | Msa1024090 | 0.806085 | 9.761077e-50 | -8.615850e-47 |
| Msa0744040 | Msa1024090 | 0.843830 | 1.101019e-58 | -8.615850e-47 |
| Msa0756540 | Msa1024090 | 0.817007 | 4.121835e-52 | -8.615850e-47 |
| Msa0760130 | Msa1024090 | 0.825100 | 5.635926e-54 | -8.615850e-47 |
| Msa0787850 | Msa1024090 | 0.800066 | 1.715579e-48 | -8.615850e-47 |
| Msa0811130 | Msa1024090 | 0.811335 | 7.371334e-51 | -8.615850e-47 |
| Msa0820770 | Msa1024090 | 0.802229 | 6.195296e-49 | -8.615850e-47 |
| Msa0824660 | Msa1024090 | 0.826250 | 3.007245e-54 | -8.615850e-47 |
| Msa0832090 | Msa1024090 | 0.800391 | 1.473130e-48 | -8.615850e-47 |
| Msa0832150 | Msa1024090 | 0.805524 | 1.280870e-49 | -8.615850e-47 |
| Msa0121380 | Msa1024090 | 0.808176 | 3.521576e-50 | -8.615850e-47 |
| Msa0131330 | Msa1024090 | 0.801202 | 1.006275e-48 | -8.615850e-47 |
| Msa0159930 | Msa1024090 | 0.814495 | 1.496179e-51 | -8.615850e-47 |
| Msa0166870 | Msa1024090 | 0.802794 | 4.736883e-49 | -8.615850e-47 |
| Msa0170570 | Msa1024090 | 0.804571 | 2.026454e-49 | -8.615850e-47 |
| Msa0197660 | Msa1024090 | 0.805598 | 1.235365e-49 | -8.615850e-47 |
| Msa0210960 | Msa1024090 | 0.801053 | 1.079600e-48 | -8.615850e-47 |
| Msa0212990 | Msa1024090 | 0.803374 | 3.594782e-49 | -8.615850e-47 |
| Msa0213070 | Msa1024090 | 0.801944 | 7.089021e-49 | -8.615850e-47 |
| Msa0213520 | Msa1024090 | 0.818771 | 1.647368e-52 | -8.615850e-47 |
| Msa0220580 | Msa1024090 | 0.826807 | 2.214994e-54 | -8.615850e-47 |
| Msa0222620 | Msa1024090 | 0.808785 | 2.610591e-50 | -8.615850e-47 |
| Msa0230680 | Msa1024090 | 0.808850 | 2.529318e-50 | -8.615850e-47 |
| Msa0376350 | Msa1024090 | 0.819371 | 1.202839e-52 | -8.615850e-47 |
| Msa0379640 | Msa1024090 | 0.800617 | 1.325314e-48 | -8.615850e-47 |
| Msa0406770 | Msa1024090 | 0.805390 | 1.366186e-49 | -8.615850e-47 |
| Msa0424790 | Msa1024090 | 0.805743 | 1.152183e-49 | -8.615850e-47 |
| Msa0428050 | Msa1024090 | 0.809937 | 1.478196e-50 | -8.615850e-47 |
| Msa0436370 | Msa1024090 | 0.800711 | 1.267802e-48 | -8.615850e-47 |
| Msa0453330 | Msa1024090 | 0.802215 | 6.236939e-49 | -8.615850e-47 |
| Msa0464900 | Msa1024090 | 0.801595 | 8.360000e-49 | -8.615850e-47 |
| Msa0479170 | Msa1024090 | 0.805439 | 1.334177e-49 | -8.615850e-47 |
| Msa1024090 | Msa1029210 | 0.832011 | 1.205555e-55 | -8.615850e-47 |
| Msa1024090 | Msa1045200 | 0.820017 | 8.566154e-53 | -8.615850e-47 |
| Msa1024090 | Msa1051600 | 0.801331 | 9.471110e-49 | -8.615850e-47 |
| Msa1024090 | Msa1063960 | 0.969060 | 1.430178e-129 | -8.615850e-47 |
| Msa1024090 | Msa1080960 | 0.802188 | 6.314763e-49 | -8.615850e-47 |
| Msa1024090 | Msa1082500 | 0.831032 | 2.099993e-55 | -8.615850e-47 |
| Msa1024090 | Msa1087980 | 0.806488 | 8.027609e-50 | -8.615850e-47 |
| Msa1024090 | Msa1098400 | 0.836178 | 1.089603e-56 | -8.615850e-47 |
| Msa1024090 | Msa1098420 | 0.814849 | 1.249344e-51 | -8.615850e-47 |
| Msa1024090 | Msa1111180 | 0.819384 | 1.194915e-52 | -8.615850e-47 |
| Msa1024090 | Msa1117170 | 0.808555 | 2.924030e-50 | -8.615850e-47 |
| Msa1024090 | Msa1151900 | 0.910657 | 1.466406e-82 | -8.615850e-47 |
| Msa1024090 | Msa1152990 | 0.824513 | 7.751227e-54 | -8.615850e-47 |
| Msa1024090 | Msa1154780 | 0.825849 | 3.746254e-54 | -8.615850e-47 |
| Msa1024090 | Msa1158310 | 0.803218 | 3.871117e-49 | -8.615850e-47 |
| Msa1024090 | Msa1165520 | 0.832025 | 1.196021e-55 | -8.615850e-47 |
| Msa1024090 | Msa1185980 | 0.809259 | 2.067053e-50 | -8.615850e-47 |
| Msa1024090 | Msa1204530 | 0.814099 | 1.830453e-51 | -8.615850e-47 |
| Msa1024090 | Msa1204630 | 0.810600 | 1.063239e-50 | -8.615850e-47 |
| Msa1024090 | Msa1205370 | 0.826215 | 3.064993e-54 | -8.615850e-47 |
| Msa1024090 | Msa1233890 | 0.804400 | 2.199566e-49 | -8.615850e-47 |
| Msa1024090 | Msa1250290 | 0.808447 | 3.083900e-50 | -8.615850e-47 |
| Msa1024090 | Msa1297290 | 0.825026 | 5.865721e-54 | -8.615850e-47 |
| Msa1024090 | Msa1306840 | 0.805974 | 1.029904e-49 | -8.615850e-47 |
| Msa1024090 | Msa1306850 | 0.819622 | 1.054215e-52 | -8.615850e-47 |
| Msa1024090 | Msa1314100 | 0.803336 | 3.659342e-49 | -8.615850e-47 |
| Msa1024090 | Msa1314340 | 0.816240 | 6.123908e-52 | -8.615850e-47 |
| Msa1024090 | Msa1320620 | 0.806740 | 7.102578e-50 | -8.615850e-47 |
| Msa1024090 | Msa1329700 | 0.827551 | 1.469727e-54 | -8.615850e-47 |
| Msa1024090 | Msa1331000 | 0.807874 | 4.084777e-50 | -8.615850e-47 |
| Msa1024090 | Msa1341950 | 0.806395 | 8.399286e-50 | -8.615850e-47 |
| Msa1024090 | Msa1346370 | 0.805788 | 1.127419e-49 | -8.615850e-47 |
| Msa1024090 | Msa1348880 | 0.803310 | 3.705787e-49 | -8.615850e-47 |
| Msa1024090 | Msa1353980 | 0.805399 | 1.360385e-49 | -8.615850e-47 |
| Msa1024090 | Msa1364830 | 0.802243 | 6.154775e-49 | -8.615850e-47 |
| Msa1024090 | Msa1372150 | 0.801644 | 8.169336e-49 | -8.615850e-47 |
| Msa1024090 | Msa1376130 | 0.807984 | 3.868937e-50 | -8.615850e-47 |
| Msa1024090 | Msa1377570 | 0.813662 | 2.284958e-51 | -8.615850e-47 |
| Msa1024090 | Msa1379850 | 0.801962 | 7.030277e-49 | -8.615850e-47 |
| Msa1024090 | Msa1380900 | 0.808102 | 3.653076e-50 | -8.615850e-47 |
| Msa1024090 | Msa1385000 | 0.824684 | 7.065310e-54 | -8.615850e-47 |
| Msa1024090 | Msa1392700 | 0.803914 | 2.776133e-49 | -8.615850e-47 |
| Msa1024090 | Msa1395900 | 0.801853 | 7.399850e-49 | -8.615850e-47 |
| Msa1024090 | Msa1404540 | 0.818541 | 1.857328e-52 | -8.615850e-47 |
| Msa1024090 | Msa1409700 | 0.804617 | 1.982559e-49 | -8.615850e-47 |
| Msa1024090 | Msa1411020 | 0.842336 | 2.751697e-58 | -8.615850e-47 |
| Msa1024090 | Msa1415940 | 0.809798 | 1.583422e-50 | -8.615850e-47 |
| Msa1024090 | Msa1420490 | 0.828298 | 9.715908e-55 | -8.615850e-47 |
| Msa1024090 | Msa1423390 | 0.827289 | 1.698160e-54 | -8.615850e-47 |
| Msa1024090 | Msa1424290 | 0.832462 | 9.324343e-56 | -8.615850e-47 |
| Msa1024090 | Msa1424450 | 0.806775 | 6.983404e-50 | -8.615850e-47 |
| Msa1024090 | Msa1427230 | 0.811336 | 7.368430e-51 | -8.615850e-47 |
| Msa1024090 | Msa1431060 | 0.813719 | 2.220249e-51 | -8.615850e-47 |
| Msa1024090 | Msa1434350 | 0.834582 | 2.758223e-56 | -8.615850e-47 |
| Msa1024090 | Msa1435270 | 0.803080 | 4.134414e-49 | -8.615850e-47 |
| Msa1024090 | Msa1436480 | 0.813935 | 1.989178e-51 | -8.615850e-47 |
| Msa1024090 | Msa1439320 | 0.841165 | 5.606816e-58 | -8.615850e-47 |
| Msa1024090 | Msa1440370 | 0.824881 | 6.346127e-54 | -8.615850e-47 |
| Msa1024090 | Msa1440810 | 0.831136 | 1.980780e-55 | -8.615850e-47 |
| Msa1024090 | Msa1440940 | 0.802117 | 6.533188e-49 | -8.615850e-47 |
| Msa1024090 | Msa1448490 | 0.802037 | 6.783295e-49 | -8.615850e-47 |
| Msa1024090 | Msa1449520 | 0.809204 | 2.124372e-50 | -8.615850e-47 |
| Msa1024090 | Msa1452120 | 0.822165 | 2.740217e-53 | -8.615850e-47 |
| Msa1024090 | Msa1453560 | 0.802819 | 4.680490e-49 | -8.615850e-47 |
| Msa1024090 | Msa1457430 | 0.816250 | 6.093696e-52 | -8.615850e-47 |
| Msa1024090 | Msa1460020 | 0.834268 | 3.306468e-56 | -8.615850e-47 |
| Msa1024090 | Msa1460050 | 0.808792 | 2.602510e-50 | -8.615850e-47 |
| Msa1024090 | Msa1460830 | 0.808678 | 2.752911e-50 | -8.615850e-47 |
| Msa1024090 | Msa1462930 | 0.809402 | 1.925851e-50 | -8.615850e-47 |
| Msa0239800 | Msa1024090 | 0.811336 | 7.365584e-51 | -8.615850e-47 |
| Msa0242430 | Msa1024090 | 0.811569 | 6.557236e-51 | -8.615850e-47 |
| Msa0247170 | Msa1024090 | 0.801403 | 9.155857e-49 | -8.615850e-47 |
| Msa0251270 | Msa1024090 | 0.807806 | 4.223070e-50 | -8.615850e-47 |
| Msa0260810 | Msa1024090 | 0.815889 | 7.335869e-52 | -8.615850e-47 |
| Msa0264780 | Msa1024090 | 0.818969 | 1.484782e-52 | -8.615850e-47 |
| Msa0276920 | Msa1024090 | 0.809347 | 1.979129e-50 | -8.615850e-47 |
| Msa0280630 | Msa1024090 | 0.809900 | 1.505388e-50 | -8.615850e-47 |
| Msa0287650 | Msa1024090 | 0.804484 | 2.113429e-49 | -8.615850e-47 |
| Msa0290760 | Msa1024090 | 0.807264 | 5.502580e-50 | -8.615850e-47 |
| Msa0317510 | Msa1024090 | 0.817455 | 3.268554e-52 | -8.615850e-47 |
| Msa0317730 | Msa1024090 | 0.809793 | 1.587378e-50 | -8.615850e-47 |
| Msa0326520 | Msa1024090 | 0.808316 | 3.288431e-50 | -8.615850e-47 |
| Msa0334040 | Msa1024090 | 0.801433 | 9.024070e-49 | -8.615850e-47 |
| Msa0335040 | Msa1024090 | 0.801707 | 7.930940e-49 | -8.615850e-47 |
| Msa0345970 | Msa1024090 | 0.806273 | 8.912280e-50 | -8.615850e-47 |
| Msa0351380 | Msa1024090 | 0.828703 | 7.759954e-55 | -8.615850e-47 |
| Msa0357020 | Msa1024090 | 0.813643 | 2.306940e-51 | -8.615850e-47 |
| Msa0359030 | Msa1024090 | 0.802096 | 6.598084e-49 | -8.615850e-47 |
| Msa0484780 | Msa1024090 | 0.857217 | 1.896964e-62 | -8.615850e-47 |
| Msa0486130 | Msa1024090 | 0.803041 | 4.211993e-49 | -8.615850e-47 |
| Msa0488560 | Msa1024090 | 0.814990 | 1.162817e-51 | -8.615850e-47 |
| Msa0503060 | Msa1024090 | 0.821307 | 4.328633e-53 | -8.615850e-47 |
| Msa0512870 | Msa1024090 | 0.820895 | 5.387113e-53 | -8.615850e-47 |
| Msa0516170 | Msa1024090 | 0.813602 | 2.356037e-51 | -8.615850e-47 |
| Msa0545060 | Msa1024090 | 0.822775 | 1.978198e-53 | -8.615850e-47 |
| Msa0574390 | Msa1024090 | 0.818517 | 1.880677e-52 | -8.615850e-47 |
| Msa0576680 | Msa1024090 | 0.811070 | 8.413297e-51 | -8.615850e-47 |
| Msa0577500 | Msa1024090 | 0.801688 | 8.001947e-49 | -8.615850e-47 |
| Msa0861090 | Msa1024090 | 0.804202 | 2.418680e-49 | -8.615850e-47 |
| Msa0863930 | Msa1024090 | 0.845369 | 4.238500e-59 | -8.615850e-47 |
| Msa0895790 | Msa1024090 | 0.811484 | 6.841138e-51 | -8.615850e-47 |
| Msa0900620 | Msa1024090 | 0.801751 | 7.765459e-49 | -8.615850e-47 |
| Msa0906690 | Msa1024090 | 0.835501 | 1.617505e-56 | -8.615850e-47 |
| Msa0907950 | Msa1024090 | 0.802357 | 5.829282e-49 | -8.615850e-47 |
| Msa0924310 | Msa1024090 | 0.809658 | 1.696886e-50 | -8.615850e-47 |
| Msa0939000 | Msa1024090 | 0.804604 | 1.994592e-49 | -8.615850e-47 |
| Msa0954130 | Msa1024090 | 0.800031 | 1.743584e-48 | -8.615850e-47 |
| Msa0954550 | Msa1024090 | 0.806338 | 8.633765e-50 | -8.615850e-47 |
| Msa0969450 | Msa1024090 | 0.805705 | 1.173338e-49 | -8.615850e-47 |
| Msa0971090 | Msa1024090 | 0.805806 | 1.117618e-49 | -8.615850e-47 |
| Msa0975940 | Msa1024090 | 0.812943 | 3.287188e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024090 | MtrunA17_Chr7g0258151 | 88.211 | 246 | 26 | 2 | 376 | 618 | 1 | 246 | 6.18e-155 | 445 |
| Msa1024090 | MtrunA17_Chr7g0258151 | 88.835 | 206 | 21 | 1 | 129 | 332 | 1 | 206 | 5.91e-130 | 381 |
| Msa1024090 | MtrunA17_Chr7g0231121 | 94.054 | 185 | 10 | 1 | 376 | 559 | 1 | 185 | 7.49e-122 | 358 |
| Msa1024090 | MtrunA17_Chr7g0231121 | 90.761 | 184 | 17 | 0 | 129 | 312 | 1 | 184 | 3.70e-120 | 354 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024090 | AT5G60230.1 | 55.785 | 242 | 94 | 3 | 376 | 615 | 1 | 231 | 2.53e-78 | 249 |
| Msa1024090 | AT5G60230.1 | 54.412 | 204 | 81 | 3 | 129 | 332 | 1 | 192 | 3.23e-63 | 209 |
| Msa1024090 | AT5G60230.2 | 55.785 | 242 | 94 | 3 | 376 | 615 | 6 | 236 | 3.01e-78 | 249 |
| Msa1024090 | AT5G60230.2 | 54.106 | 207 | 83 | 3 | 126 | 332 | 3 | 197 | 8.13e-64 | 211 |
| Msa1024090 | AT3G45590.2 | 54.545 | 242 | 98 | 3 | 376 | 615 | 1 | 232 | 2.35e-76 | 243 |
| Msa1024090 | AT3G45590.2 | 52.830 | 212 | 87 | 4 | 129 | 339 | 1 | 200 | 3.22e-62 | 206 |
| Msa1024090 | AT3G45590.1 | 54.545 | 242 | 98 | 3 | 376 | 615 | 1 | 232 | 2.35e-76 | 243 |
| Msa1024090 | AT3G45590.1 | 52.830 | 212 | 87 | 4 | 129 | 339 | 1 | 200 | 3.22e-62 | 206 |
| Msa1024090 | AT3G45577.1 | 48.958 | 96 | 46 | 1 | 418 | 513 | 26 | 118 | 2.20e-18 | 81.6 |
| Msa1024090 | AT3G45577.1 | 47.423 | 97 | 47 | 2 | 171 | 267 | 26 | 118 | 8.90e-17 | 77.0 |
Find 158 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACAACTCTTCATCATTTA+AGG | 0.063723 | 7_1:+52581847 | None:intergenic |
| GGTAGAAGTATCACAAATTT+AGG | 0.125052 | 7_1:+52582875 | None:intergenic |
| ACGCCACAACTCTTCATTTA+AGG | 0.137177 | 7_1:+52579903 | None:intergenic |
| CTAAACTTCAAATTTAATTA+TGG | 0.159157 | 7_1:+52579421 | None:intergenic |
| AAACACGATTTCAATTAAAA+AGG | 0.199522 | 7_1:+52583408 | None:intergenic |
| ACCACCACCATCTCTGTTTA+AGG | 0.221769 | 7_1:-52583465 | Msa1024090:five_prime_UTR |
| TTGAAATGCCTCAAGATTAA+TGG | 0.229021 | 7_1:-52581887 | Msa1024090:CDS |
| ACAAGGGAATGTTTCTTTCT+TGG | 0.237646 | 7_1:+52581811 | None:intergenic |
| GTTAACGTACAAACCTAATA+AGG | 0.279589 | 7_1:+52581565 | None:intergenic |
| CATTGCACAACTCGACTTCT+TGG | 0.283326 | 7_1:-52581602 | Msa1024090:CDS |
| CTTTGCACAACTCGACTTCT+TGG | 0.291537 | 7_1:-52579661 | Msa1024090:CDS |
| GAATAAGCCTTGTAGAAATA+AGG | 0.297148 | 7_1:+52579853 | None:intergenic |
| TATACAATATCATTAGGTTT+TGG | 0.305086 | 7_1:-52583214 | Msa1024090:five_prime_UTR |
| GCTCGGGTGCATTCTGAGTA+TGG | 0.321264 | 7_1:-52579751 | Msa1024090:CDS |
| GCTCGGGTGCATTCTGAGTA+TGG | 0.321264 | 7_1:-52581692 | Msa1024090:CDS |
| TAAACTTCAAATTTAATTAT+GGG | 0.321933 | 7_1:+52579422 | None:intergenic |
| ATAAGGGAATGCTTCTTTCT+TGG | 0.327789 | 7_1:+52579870 | None:intergenic |
| CGCCACAACTCTTCATTTAA+GGG | 0.336160 | 7_1:+52579904 | None:intergenic |
| TGCAGTTGATGTATCGTGTT+TGG | 0.338170 | 7_1:+52583586 | None:intergenic |
| AGTTTAAACCCTTTGATTAG+TGG | 0.346138 | 7_1:-52579354 | Msa1024090:three_prime_UTR |
| TAAGGGAATGCTTCTTTCTT+GGG | 0.350469 | 7_1:+52579871 | None:intergenic |
| TAAATAGAAGATTGAGAGTA+TGG | 0.364355 | 7_1:-52579693 | Msa1024090:CDS |
| ACCCTTTGATTAGTGGTTAG+TGG | 0.365901 | 7_1:-52579347 | Msa1024090:three_prime_UTR |
| GCATAATAATCAACTTCAAT+TGG | 0.376599 | 7_1:+52583332 | None:intergenic |
| CACAACTCTTCATCATTTAA+GGG | 0.377780 | 7_1:+52581848 | None:intergenic |
| TCTTGGTTGGTGGACGGTGG+TGG | 0.381099 | 7_1:+52583521 | None:intergenic |
| AGAGCGACGGCGGTTGGTCT+TGG | 0.392045 | 7_1:+52583504 | None:intergenic |
| CCGGTGGAAGCATCTTCAAC+AGG | 0.398597 | 7_1:-52582839 | Msa1024090:CDS |
| ATTAATCTTGAGGCATTTCA+AGG | 0.418645 | 7_1:+52581889 | None:intergenic |
| GTAGAAGTATCACAAATTTA+GGG | 0.422337 | 7_1:+52582876 | None:intergenic |
| GTGAAGTCAGGGGCTCAGTA+TGG | 0.424296 | 7_1:-52581746 | Msa1024090:CDS |
| AATAAGCCTTGTAGAAATAA+GGG | 0.428978 | 7_1:+52579854 | None:intergenic |
| TTGCTTAATAAAGCGTGCTT+TGG | 0.429218 | 7_1:-52580045 | Msa1024090:CDS |
| GTGAGGTCAGGGTCTCAGTA+TGG | 0.430753 | 7_1:-52579805 | Msa1024090:CDS |
| GGGAAAGGTGAGATGAGAGC+AGG | 0.437042 | 7_1:+52583429 | None:intergenic |
| ATTAATGACGGTGCTGATAC+TGG | 0.437232 | 7_1:-52579928 | Msa1024090:CDS |
| TTGTCGTTGGTGGTGGCCGG+TGG | 0.437463 | 7_1:+52583545 | None:intergenic |
| GAGAGCGGGAAAGGGAAAGA+AGG | 0.439920 | 7_1:-52582815 | Msa1024090:CDS |
| CTTGGTTGGTGGACGGTGGT+GGG | 0.441128 | 7_1:+52583522 | None:intergenic |
| ACATCCATCTCTCACATTCC+CGG | 0.443650 | 7_1:-52581221 | Msa1024090:intron |
| GTTAACGTACAAAACTAGTA+AGG | 0.444033 | 7_1:+52579624 | None:intergenic |
| AAAGACTGGGTAGTGAAGTC+AGG | 0.444328 | 7_1:-52581758 | Msa1024090:CDS |
| GGGTTGTCGTTGGTGGTGGC+CGG | 0.447660 | 7_1:+52583542 | None:intergenic |
| CTGCTGTGTTTATGCAGAAA+GGG | 0.448840 | 7_1:+52579460 | None:intergenic |
| GCTACTTTGCTTAGCGGCAG+CGG | 0.453491 | 7_1:-52582776 | Msa1024090:CDS |
| TTGCTTGATAAAGCATGCTT+TGG | 0.455248 | 7_1:-52581989 | Msa1024090:CDS |
| ACATCCATCTCTCACATTCT+CGG | 0.457288 | 7_1:-52582716 | Msa1024090:intron |
| CGGCGGTTGGTCTTGGTTGG+TGG | 0.461185 | 7_1:+52583511 | None:intergenic |
| GCAGTTGATGTATCGTGTTT+GGG | 0.466983 | 7_1:+52583587 | None:intergenic |
| TCCACTAACCACTAATCAAA+GGG | 0.474972 | 7_1:+52579346 | None:intergenic |
| CGGTGGTGGGTTGTCGTTGG+TGG | 0.476224 | 7_1:+52583535 | None:intergenic |
| TCCACCGGTTGTTGTGAAAA+CGG | 0.478231 | 7_1:+52582854 | None:intergenic |
| CCATTGCTCTAGACTCCGTC+TGG | 0.479107 | 7_1:+52579534 | None:intergenic |
| TGGTGGGTTGTCGTTGGTGG+TGG | 0.479442 | 7_1:+52583538 | None:intergenic |
| TCAACAGGGGAGAGCGGGAA+AGG | 0.480519 | 7_1:-52582824 | Msa1024090:CDS |
| AACATTCCCTTGTTTCTACA+AGG | 0.481450 | 7_1:-52581801 | Msa1024090:CDS |
| TATTGTTTATCGCCATCATC+CGG | 0.483793 | 7_1:-52579773 | Msa1024090:CDS |
| TATTGTTTATCGCCATCATC+CGG | 0.483793 | 7_1:-52581714 | Msa1024090:CDS |
| CGACGGCGGTTGGTCTTGGT+TGG | 0.485854 | 7_1:+52583508 | None:intergenic |
| CATCTTCAACAGGGGAGAGC+GGG | 0.487039 | 7_1:-52581334 | Msa1024090:intron |
| CATCTTCAACAGGGGAGAGC+GGG | 0.487039 | 7_1:-52582829 | Msa1024090:CDS |
| CTACCACAAGCTCGGTCTCT+AGG | 0.487113 | 7_1:+52583040 | None:intergenic |
| GCTACTTTGCTTAGTGGCGG+CGG | 0.487147 | 7_1:-52581281 | Msa1024090:CDS |
| TAGATGGAAGATTGAGAGAA+TGG | 0.490141 | 7_1:-52581634 | Msa1024090:CDS |
| GGACGGTGGTGGGTTGTCGT+TGG | 0.490314 | 7_1:+52583532 | None:intergenic |
| GGGAAACGCCTGGGTGGACC+TGG | 0.493018 | 7_1:+52582896 | None:intergenic |
| CTCAGTGATATTGTGAGTCC+AGG | 0.493900 | 7_1:-52582914 | Msa1024090:CDS |
| AATGCACCCGAGCCGGATGA+TGG | 0.494307 | 7_1:+52579761 | None:intergenic |
| AATGCACCCGAGCCGGATGA+TGG | 0.494307 | 7_1:+52581702 | None:intergenic |
| TCTGCTGTGTTTATGCAGAA+AGG | 0.496547 | 7_1:+52579459 | None:intergenic |
| GACAATGATGGTGATCTAGA+TGG | 0.497076 | 7_1:-52581650 | Msa1024090:CDS |
| TAGTTGACAAGGATATGTAT+TGG | 0.499569 | 7_1:-52580008 | Msa1024090:CDS |
| TAGTTGACAAGGATATGTAT+TGG | 0.499569 | 7_1:-52581952 | Msa1024090:CDS |
| TGTCGTTGGTGGTGGCCGGT+GGG | 0.502479 | 7_1:+52583546 | None:intergenic |
| GGAAAGGTGAGATGAGAGCA+GGG | 0.506960 | 7_1:+52583430 | None:intergenic |
| AGCATTCCCTTATTTCTACA+AGG | 0.509569 | 7_1:-52579860 | Msa1024090:CDS |
| CGTTGGTGGTGGCCGGTGGG+TGG | 0.510025 | 7_1:+52583549 | None:intergenic |
| GGCGGAGATAGAACTATCAT+TGG | 0.511446 | 7_1:-52581263 | Msa1024090:CDS |
| AGCGGAGATAGAACTATCAT+TGG | 0.513023 | 7_1:-52582758 | Msa1024090:CDS |
| CAACAGGGGAGAGCGGGAAA+AGG | 0.513805 | 7_1:-52581328 | Msa1024090:intron |
| GGAGATTGTGCGTTCTTCGA+TGG | 0.514064 | 7_1:+52579555 | None:intergenic |
| CAATAAGCCTTGTAGAAACA+AGG | 0.516266 | 7_1:+52581794 | None:intergenic |
| CAACAGGGGAGAGCGGGAAA+GGG | 0.520595 | 7_1:-52582823 | Msa1024090:CDS |
| TTTCAAAACCTAATGAGAGC+TGG | 0.523191 | 7_1:-52583304 | Msa1024090:five_prime_UTR |
| GGGAAAGGGAAAGAAGGTAG+AGG | 0.523326 | 7_1:-52582809 | Msa1024090:CDS |
| TTATCGCCATCATCCGGCTC+GGG | 0.524109 | 7_1:-52579767 | Msa1024090:CDS |
| TTATCGCCATCATCCGGCTC+GGG | 0.524109 | 7_1:-52581708 | Msa1024090:CDS |
| TACTCAGAATGCACCCGAGC+CGG | 0.524568 | 7_1:+52579754 | None:intergenic |
| TACTCAGAATGCACCCGAGC+CGG | 0.524568 | 7_1:+52581695 | None:intergenic |
| GGTTGGTCTTGGTTGGTGGA+CGG | 0.526564 | 7_1:+52583515 | None:intergenic |
| CACAAATTTAGGGAAACGCC+TGG | 0.529066 | 7_1:+52582886 | None:intergenic |
| AAGGTCAAATGGCACCAAGA+TGG | 0.532690 | 7_1:-52580233 | Msa1024090:CDS |
| AAGGTCAAATGGCACCAAGA+TGG | 0.532690 | 7_1:-52582177 | Msa1024090:CDS |
| TTTATCGCCATCATCCGGCT+CGG | 0.534738 | 7_1:-52579768 | Msa1024090:CDS |
| TTTATCGCCATCATCCGGCT+CGG | 0.534738 | 7_1:-52581709 | Msa1024090:CDS |
| TGTGATACAATCTTTGACAT+GGG | 0.538484 | 7_1:+52580156 | None:intergenic |
| TGTGATACAATCTTTGACAT+GGG | 0.538484 | 7_1:+52582100 | None:intergenic |
| CCTGTTGAAGATGCTTCCAC+CGG | 0.541455 | 7_1:+52582839 | None:intergenic |
| CAGAGGAGAGCGACGGCGGT+TGG | 0.548495 | 7_1:+52583498 | None:intergenic |
| TTCCACTAACCACTAATCAA+AGG | 0.549977 | 7_1:+52579345 | None:intergenic |
| GGCATTTCAAGGAATAACAT+AGG | 0.552981 | 7_1:+52581900 | None:intergenic |
| TTGTGATACAATCTTTGACA+TGG | 0.553740 | 7_1:+52580155 | None:intergenic |
| TTGTGATACAATCTTTGACA+TGG | 0.553740 | 7_1:+52582099 | None:intergenic |
| TTAGTTCAATCAAATACTTG+TGG | 0.557545 | 7_1:-52580120 | Msa1024090:CDS |
| TTAGTTCAATCAAATACTTG+TGG | 0.557545 | 7_1:-52582064 | Msa1024090:CDS |
| TAGATAGAATGCTTCCTCCA+TGG | 0.562337 | 7_1:+52579975 | None:intergenic |
| TGGTCTTGGTTGGTGGACGG+TGG | 0.563724 | 7_1:+52583518 | None:intergenic |
| TCCTTGTCAACTATCCTCAC+AGG | 0.567073 | 7_1:+52580018 | None:intergenic |
| TCCTTGTCAACTATCCTCAC+AGG | 0.567073 | 7_1:+52581962 | None:intergenic |
| CAGCACCGTCATTAATCTTG+AGG | 0.574856 | 7_1:+52579935 | None:intergenic |
| AAGACTGGGTAGTGAAGTCA+GGG | 0.585343 | 7_1:-52581757 | Msa1024090:CDS |
| CGGTGGAAGCATCTTCAACA+GGG | 0.588422 | 7_1:-52582838 | Msa1024090:CDS |
| TACTCTCACTACCACAAGCT+CGG | 0.589035 | 7_1:+52583032 | None:intergenic |
| AAAGGTGAGATGAGAGCAGG+GGG | 0.589718 | 7_1:+52583432 | None:intergenic |
| TAGGTAGAATGCTTCCTCCT+CGG | 0.589972 | 7_1:+52581919 | None:intergenic |
| CAAATGGCACCAAGATGGAA+AGG | 0.591208 | 7_1:-52580228 | Msa1024090:CDS |
| CAAATGGCACCAAGATGGAA+AGG | 0.591208 | 7_1:-52582172 | Msa1024090:CDS |
| AGCATCAGTGCACCACCCAC+CGG | 0.592707 | 7_1:-52583561 | Msa1024090:five_prime_UTR |
| GTATTGGTTTCAATTAACCA+TGG | 0.594762 | 7_1:-52579992 | Msa1024090:CDS |
| TTTAATAAGAATCTGCGCGA+AGG | 0.595321 | 7_1:+52582974 | None:intergenic |
| AAAACTGGGTAGTGAGGTCA+GGG | 0.603360 | 7_1:-52579816 | Msa1024090:CDS |
| GAGCACCTCCATTAATCTTG+AGG | 0.609670 | 7_1:+52581879 | None:intergenic |
| GCATCTTCAACAGGGGAGAG+CGG | 0.616909 | 7_1:-52581335 | Msa1024090:intron |
| GCATCTTCAACAGGGGAGAG+CGG | 0.616909 | 7_1:-52582830 | Msa1024090:CDS |
| GTTCTATCACATGACAATGA+TGG | 0.620867 | 7_1:-52579721 | Msa1024090:CDS |
| GTTCTATCACATGACAATGA+TGG | 0.620867 | 7_1:-52581662 | Msa1024090:CDS |
| ACCTGTGAGGATAGTTGACA+AGG | 0.621958 | 7_1:-52581963 | Msa1024090:CDS |
| ATGCCTAGAGACCGAGCTTG+TGG | 0.622108 | 7_1:-52583043 | Msa1024090:CDS |
| GGGAAAAGGAAAGAAGCTAA+AGG | 0.622115 | 7_1:-52581314 | Msa1024090:CDS |
| CCAGACGGAGTCTAGAGCAA+TGG | 0.624067 | 7_1:-52579534 | Msa1024090:CDS |
| AAACTGGCCTTAAACAGAGA+TGG | 0.628642 | 7_1:+52583458 | None:intergenic |
| GGGGCTACTTTGCTTAGTGG+CGG | 0.630831 | 7_1:-52581284 | Msa1024090:CDS |
| AAATGCCTCAAGATTAATGA+CGG | 0.637181 | 7_1:-52579940 | Msa1024090:CDS |
| GTCCCTTAAATGAAGAGTTG+TGG | 0.637860 | 7_1:-52579906 | Msa1024090:CDS |
| AATAAGCCTTGTAGAAACAA+GGG | 0.638392 | 7_1:+52581795 | None:intergenic |
| TTGTGAGTCCAGGTCCACCC+AGG | 0.639971 | 7_1:-52582904 | Msa1024090:CDS |
| CTGACAGAGGAGAGCGACGG+CGG | 0.640306 | 7_1:+52583494 | None:intergenic |
| ACCTGTGAGGATAGTTGACA+AGG | 0.642072 | 7_1:-52580019 | Msa1024090:CDS |
| TGTACCGAGAATGTGAGAGA+TGG | 0.651470 | 7_1:+52582712 | None:intergenic |
| TTGGTTTCAGTTAACCGAGG+AGG | 0.658202 | 7_1:-52581933 | Msa1024090:CDS |
| ACAAATTTAGGGAAACGCCT+GGG | 0.658451 | 7_1:+52582887 | None:intergenic |
| CTGGCCTTAAACAGAGATGG+TGG | 0.660066 | 7_1:+52583461 | None:intergenic |
| CGTGCTTTGGTCGACCTGTG+AGG | 0.662108 | 7_1:-52580032 | Msa1024090:CDS |
| GAAAGGTGAGATGAGAGCAG+GGG | 0.663825 | 7_1:+52583431 | None:intergenic |
| TGTACCGGGAATGTGAGAGA+TGG | 0.664950 | 7_1:+52581217 | None:intergenic |
| AAATGCCTCAAGATTAATGG+AGG | 0.668756 | 7_1:-52581884 | Msa1024090:CDS |
| GGTGGAAGCATCTTCAACAG+GGG | 0.674391 | 7_1:-52582837 | Msa1024090:CDS |
| CATGCTTTGGTCAACCTGTG+AGG | 0.682966 | 7_1:-52581976 | Msa1024090:CDS |
| GTATTGGTTTCAGTTAACCG+AGG | 0.685014 | 7_1:-52581936 | Msa1024090:CDS |
| TTGGTTTCAATTAACCATGG+AGG | 0.690068 | 7_1:-52579989 | Msa1024090:CDS |
| AATTTAGGGAAACGCCTGGG+TGG | 0.696344 | 7_1:+52582890 | None:intergenic |
| GCCTTAAACAGAGATGGTGG+TGG | 0.698634 | 7_1:+52583464 | None:intergenic |
| CCTTAAATGATGAAGAGTTG+TGG | 0.708210 | 7_1:-52581847 | Msa1024090:CDS |
| GATCTGACAGAGGAGAGCGA+CGG | 0.716868 | 7_1:+52583491 | None:intergenic |
| AAGAACGCACAATCTCCAGA+CGG | 0.725163 | 7_1:-52579549 | Msa1024090:CDS |
| TGGTGGTGCTGATCTGACAG+AGG | 0.778557 | 7_1:+52583481 | None:intergenic |
| CTGGACTCACAATATCACTG+AGG | 0.781656 | 7_1:+52582915 | None:intergenic |
| AGACTGGGTAGTGAAGTCAG+GGG | 0.803024 | 7_1:-52581756 | Msa1024090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACAATTTTTTTTGTAATT+GGG | + | chr7_1:52579350-52579369 | None:intergenic | 10.0% |
| !!! | AAAACAATTTTTTTTGTAAT+TGG | + | chr7_1:52579351-52579370 | None:intergenic | 10.0% |
| !!! | TTATTTTCTTTGTTTTTTTA+AGG | - | chr7_1:52582275-52582294 | Msa1024090:intron | 10.0% |
| !! | TTTACTTATATTTAATGAAA+CGG | + | chr7_1:52582322-52582341 | None:intergenic | 10.0% |
| !! | TAAACTTCAAATTTAATTAT+GGG | + | chr7_1:52583587-52583606 | None:intergenic | 10.0% |
| !! | GATAGAAAAACAAAAAATAA+TGG | - | chr7_1:52579724-52579743 | Msa1024090:CDS | 15.0% |
| !! | AAAATTTGAAAGAAACAAAA+CGG | + | chr7_1:52580597-52580616 | None:intergenic | 15.0% |
| !!! | TTATCTCCTTTTATATATTA+AGG | - | chr7_1:52580622-52580641 | Msa1024090:intron | 15.0% |
| !!! | TATCTCCTTTTATATATTAA+GGG | - | chr7_1:52580623-52580642 | Msa1024090:intron | 15.0% |
| !! | ATATACCCTTAATATATAAA+AGG | + | chr7_1:52580631-52580650 | None:intergenic | 15.0% |
| !!! | ATTGTTTGACTTTTTTTATA+AGG | - | chr7_1:52580810-52580829 | Msa1024090:intron | 15.0% |
| !! | TACCGTATTAATATATTATT+TGG | - | chr7_1:52582108-52582127 | Msa1024090:CDS | 15.0% |
| !! | AGCCAAATAATATATTAATA+CGG | + | chr7_1:52582113-52582132 | None:intergenic | 15.0% |
| !! | TTTATAAAAGTTGAGTTATA+CGG | + | chr7_1:52582239-52582258 | None:intergenic | 15.0% |
| !! | ATATACCCTTAATATATAAA+GGG | + | chr7_1:52580631-52580650 | None:intergenic | 15.0% |
| !! | TATATACCCTTAATATATAA+AGG | + | chr7_1:52580632-52580651 | None:intergenic | 15.0% |
| !!! | ATTGTTTGACTTTTTTTATA+AGG | - | chr7_1:52580810-52580829 | Msa1024090:intron | 15.0% |
| !! | CTAAACTTCAAATTTAATTA+TGG | + | chr7_1:52583588-52583607 | None:intergenic | 15.0% |
| !! | AACACGATTTCAATTAAAAA+GGG | + | chr7_1:52579600-52579619 | None:intergenic | 20.0% |
| !! | AAACACGATTTCAATTAAAA+AGG | + | chr7_1:52579601-52579620 | None:intergenic | 20.0% |
| !!! | AAAAAATAATGGCTCAATTT+TGG | - | chr7_1:52579735-52579754 | Msa1024090:CDS | 20.0% |
| !!! | AGCTTTTATACAATATCATT+AGG | - | chr7_1:52579786-52579805 | Msa1024090:CDS | 20.0% |
| !!! | TATACAATATCATTAGGTTT+TGG | - | chr7_1:52579792-52579811 | Msa1024090:CDS | 20.0% |
| !!! | TTTTGTTGTATAATTGAATC+AGG | - | chr7_1:52579910-52579929 | Msa1024090:CDS | 20.0% |
| !!! | GTTTTGTTTCTTTCAAATTT+TGG | - | chr7_1:52580596-52580615 | Msa1024090:intron | 20.0% |
| !!! | ACTTTTTTTATAAGGTCAAA+TGG | - | chr7_1:52580818-52580837 | Msa1024090:intron | 20.0% |
| !! | AAAAGATGCAAAATCAAAAA+AGG | - | chr7_1:52580857-52580876 | Msa1024090:intron | 20.0% |
| !! | ATACTTCTAATACAAATAGA+TGG | + | chr7_1:52581840-52581859 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTTTTTCCTTTTG+GGG | + | chr7_1:52582060-52582079 | None:intergenic | 20.0% |
| !!! | CAAGTTTTTTTTTTCCTTTT+GGG | + | chr7_1:52582061-52582080 | None:intergenic | 20.0% |
| !!! | TCAAGTTTTTTTTTTCCTTT+TGG | + | chr7_1:52582062-52582081 | None:intergenic | 20.0% |
| !!! | TTTTTCTTCTTCTTTATGTT+TGG | - | chr7_1:52582402-52582421 | Msa1024090:intron | 20.0% |
| !! | TTATCTCCCTTTATATATTA+AGG | - | chr7_1:52582566-52582585 | Msa1024090:intron | 20.0% |
| !! | TATCTCCCTTTATATATTAA+GGG | - | chr7_1:52582567-52582586 | Msa1024090:intron | 20.0% |
| !!! | ACTTTTTTTATAAGGTCAAA+TGG | - | chr7_1:52580818-52580837 | Msa1024090:intron | 20.0% |
| !! | AAAAGATGCAAAATCAAAAA+AGG | - | chr7_1:52580857-52580876 | Msa1024090:intron | 20.0% |
| !! | AACAAAAATAAAAGAACACT+AGG | + | chr7_1:52583625-52583644 | None:intergenic | 20.0% |
| ! | GATTTCAATTAAAAAGGGAA+AGG | + | chr7_1:52579595-52579614 | None:intergenic | 25.0% |
| ! | GCATAATAATCAACTTCAAT+TGG | + | chr7_1:52579677-52579696 | None:intergenic | 25.0% |
| !!! | GTAGAAGTATCACAAATTTA+GGG | + | chr7_1:52580133-52580152 | None:intergenic | 25.0% |
| ! | ACACTTCTAATACAAATAGA+TGG | + | chr7_1:52580345-52580364 | None:intergenic | 25.0% |
| ! | TTAGTTCAATCAAATACTTG+TGG | - | chr7_1:52580942-52580961 | Msa1024090:intron | 25.0% |
| !! | GTATAGTTTGTCAAACATAA+CGG | + | chr7_1:52581491-52581510 | None:intergenic | 25.0% |
| !!! | GCACAATTTTTTTGTCAATA+CGG | + | chr7_1:52581567-52581586 | None:intergenic | 25.0% |
| ! | AAAGAAGCTAAAGGAAAAAA+GGG | - | chr7_1:52581701-52581720 | Msa1024090:CDS | 25.0% |
| ! | TTTGAACCAACAAAATTGTT+TGG | + | chr7_1:52582139-52582158 | None:intergenic | 25.0% |
| !! | ATTTAGTTTAGTGTCCATTA+TGG | - | chr7_1:52582191-52582210 | Msa1024090:intron | 25.0% |
| ! | GAAGTCAAATTTATCCATAA+TGG | + | chr7_1:52582208-52582227 | None:intergenic | 25.0% |
| ! | TTAATCATAAACATAGACAG+CGG | + | chr7_1:52582456-52582475 | None:intergenic | 25.0% |
| !! | GTTTCGTTTCTTTCAAATTT+TGG | - | chr7_1:52582540-52582559 | Msa1024090:intron | 25.0% |
| ! | GATTGAGCTTTACTAAATAA+AGG | - | chr7_1:52582714-52582733 | Msa1024090:intron | 25.0% |
| ! | TTAGTTCAATCAAATACTTG+TGG | - | chr7_1:52580942-52580961 | Msa1024090:intron | 25.0% |
| !! | AATAAGCCTTGTAGAAATAA+GGG | + | chr7_1:52583155-52583174 | None:intergenic | 25.0% |
| ! | TAAATAGAAGATTGAGAGTA+TGG | - | chr7_1:52583313-52583332 | Msa1024090:five_prime_UTR | 25.0% |
| !! | GTTTTGTACGTTAACAAAAA+TGG | - | chr7_1:52583390-52583409 | Msa1024090:five_prime_UTR | 25.0% |
| !! | GGTAGAAGTATCACAAATTT+AGG | + | chr7_1:52580134-52580153 | None:intergenic | 30.0% |
| AAAGAAGGTAGAGGAAAAAA+GGG | - | chr7_1:52580206-52580225 | Msa1024090:CDS | 30.0% | |
| AGGTCAAATTATGAAGAGTA+TGG | + | chr7_1:52580443-52580462 | None:intergenic | 30.0% | |
| ATTCAATTGTTTCGCTCTTA+TGG | - | chr7_1:52580532-52580551 | Msa1024090:intron | 30.0% | |
| CCAAATTAATCAAGACACAA+AGG | + | chr7_1:52580723-52580742 | None:intergenic | 30.0% | |
| CCTTTGTGTCTTGATTAATT+TGG | - | chr7_1:52580720-52580739 | Msa1024090:intron | 30.0% | |
| GATTGAGCTTTACTAAATCA+AGG | - | chr7_1:52580770-52580789 | Msa1024090:intron | 30.0% | |
| TGTGATACAATCTTTGACAT+GGG | + | chr7_1:52580909-52580928 | None:intergenic | 30.0% | |
| TTGTGATACAATCTTTGACA+TGG | + | chr7_1:52580910-52580929 | None:intergenic | 30.0% | |
| TAGTTGACAAGGATATGTAT+TGG | - | chr7_1:52581054-52581073 | Msa1024090:intron | 30.0% | |
| ! | ATTAATCTTGAGGCATTTCA+AGG | + | chr7_1:52581120-52581139 | None:intergenic | 30.0% |
| TTGAAATGCCTCAAGATTAA+TGG | - | chr7_1:52581119-52581138 | Msa1024090:intron | 30.0% | |
| CACAACTCTTCATCATTTAA+GGG | + | chr7_1:52581161-52581180 | None:intergenic | 30.0% | |
| ! | AATAAGCCTTGTAGAAACAA+GGG | + | chr7_1:52581214-52581233 | None:intergenic | 30.0% |
| ! | TCATTTTCGAATGAAAGACT+GGG | - | chr7_1:52581235-52581254 | Msa1024090:CDS | 30.0% |
| AGTGTTGCAAAAACCTTATT+AGG | - | chr7_1:52581428-52581447 | Msa1024090:intron | 30.0% | |
| GTTAACGTACAAACCTAATA+AGG | + | chr7_1:52581444-52581463 | None:intergenic | 30.0% | |
| GGTTTGTACGTTAACAAAAA+TGG | - | chr7_1:52581449-52581468 | Msa1024090:intron | 30.0% | |
| GAAAGAAGCTAAAGGAAAAA+AGG | - | chr7_1:52581700-52581719 | Msa1024090:CDS | 30.0% | |
| AAGAAGCTAAAGGAAAAAAG+GGG | - | chr7_1:52581702-52581721 | Msa1024090:CDS | 30.0% | |
| AGAAAAAGAGAAGATTGTAC+CGG | + | chr7_1:52580312-52580331 | None:intergenic | 30.0% | |
| AGGTCAAATTATGAAGAGTA+TGG | + | chr7_1:52580443-52580462 | None:intergenic | 30.0% | |
| !! | TCTCATTTTTGTCTATGTTC+AGG | - | chr7_1:52581997-52582016 | Msa1024090:CDS | 30.0% |
| !! | CTCATTTTTGTCTATGTTCA+GGG | - | chr7_1:52581998-52582017 | Msa1024090:CDS | 30.0% |
| !! | TCATTTTTGTCTATGTTCAG+GGG | - | chr7_1:52581999-52582018 | Msa1024090:CDS | 30.0% |
| ! | AGCTATCACAATTTTTACGA+GGG | + | chr7_1:52582430-52582449 | None:intergenic | 30.0% |
| ! | AAGCTATCACAATTTTTACG+AGG | + | chr7_1:52582431-52582450 | None:intergenic | 30.0% |
| ATTCAATTGTTTCGCTCTTA+TGG | - | chr7_1:52580532-52580551 | Msa1024090:intron | 30.0% | |
| ! | CACATAAGAATTACGGATTA+GGG | + | chr7_1:52582643-52582662 | None:intergenic | 30.0% |
| CCAAATTAATCAAGACACAA+AGG | + | chr7_1:52580723-52580742 | None:intergenic | 30.0% | |
| CCTTTGTGTCTTGATTAATT+TGG | - | chr7_1:52580720-52580739 | Msa1024090:intron | 30.0% | |
| TGAGCTTTACTAAATAAAGG+TGG | - | chr7_1:52582717-52582736 | Msa1024090:CDS | 30.0% | |
| ! | TTACTAAATAAAGGTGGACT+TGG | - | chr7_1:52582723-52582742 | Msa1024090:CDS | 30.0% |
| TGTGATACAATCTTTGACAT+GGG | + | chr7_1:52580909-52580928 | None:intergenic | 30.0% | |
| TTGTGATACAATCTTTGACA+TGG | + | chr7_1:52580910-52580929 | None:intergenic | 30.0% | |
| TAGTTGACAAGGATATGTAT+TGG | - | chr7_1:52581054-52581073 | Msa1024090:intron | 30.0% | |
| !! | GTATTGGTTTCAATTAACCA+TGG | - | chr7_1:52583014-52583033 | Msa1024090:CDS | 30.0% |
| AAATGCCTCAAGATTAATGA+CGG | - | chr7_1:52583066-52583085 | Msa1024090:CDS | 30.0% | |
| ! | GAATAAGCCTTGTAGAAATA+AGG | + | chr7_1:52583156-52583175 | None:intergenic | 30.0% |
| GTTAACGTACAAAACTAGTA+AGG | + | chr7_1:52583385-52583404 | None:intergenic | 30.0% | |
| AGTTTAAACCCTTTGATTAG+TGG | - | chr7_1:52583652-52583671 | Msa1024090:five_prime_UTR | 30.0% | |
| TGTTTGGGAAAAACAACAGA+AGG | + | chr7_1:52579407-52579426 | None:intergenic | 35.0% | |
| TTTCAAAACCTAATGAGAGC+TGG | - | chr7_1:52579702-52579721 | Msa1024090:CDS | 35.0% | |
| ! | TTTTCTATCCAGCTCTCATT+AGG | + | chr7_1:52579713-52579732 | None:intergenic | 35.0% |
| TTTAATAAGAATCTGCGCGA+AGG | + | chr7_1:52580035-52580054 | None:intergenic | 35.0% | |
| GAAAGAAGGTAGAGGAAAAA+AGG | - | chr7_1:52580205-52580224 | Msa1024090:CDS | 35.0% | |
| AAGAAGGTAGAGGAAAAAAG+GGG | - | chr7_1:52580207-52580226 | Msa1024090:CDS | 35.0% | |
| ATCAAACACTTTACGTGCAA+AGG | + | chr7_1:52580373-52580392 | None:intergenic | 35.0% | |
| AATGTCTCTAATCAGTGATC+AGG | + | chr7_1:52580463-52580482 | None:intergenic | 35.0% | |
| GAAACAAAACGGAGAAAAGT+TGG | + | chr7_1:52580586-52580605 | None:intergenic | 35.0% | |
| !!! | CAAGTTTTTTTCAACACGAG+AGG | - | chr7_1:52580672-52580691 | Msa1024090:intron | 35.0% |
| CCTCGTAAGAATTACAGATT+AGG | + | chr7_1:52580700-52580719 | None:intergenic | 35.0% | |
| CCTAATCTGTAATTCTTACG+AGG | - | chr7_1:52580697-52580716 | Msa1024090:intron | 35.0% | |
| TGAGCTTTACTAAATCAAGG+TGG | - | chr7_1:52580773-52580792 | Msa1024090:intron | 35.0% | |
| ! | TTACTAAATCAAGGTGGACT+TGG | - | chr7_1:52580779-52580798 | Msa1024090:intron | 35.0% |
| TTGCTTGATAAAGCATGCTT+TGG | - | chr7_1:52581017-52581036 | Msa1024090:intron | 35.0% | |
| GGCATTTCAAGGAATAACAT+AGG | + | chr7_1:52581109-52581128 | None:intergenic | 35.0% | |
| AAATGCCTCAAGATTAATGG+AGG | - | chr7_1:52581122-52581141 | Msa1024090:intron | 35.0% | |
| CCACAACTCTTCATCATTTA+AGG | + | chr7_1:52581162-52581181 | None:intergenic | 35.0% | |
| CCTTAAATGATGAAGAGTTG+TGG | - | chr7_1:52581159-52581178 | Msa1024090:intron | 35.0% | |
| ACAAGGGAATGTTTCTTTCT+TGG | + | chr7_1:52581198-52581217 | None:intergenic | 35.0% | |
| !! | AACATTCCCTTGTTTCTACA+AGG | - | chr7_1:52581205-52581224 | Msa1024090:intron | 35.0% |
| ! | CAATAAGCCTTGTAGAAACA+AGG | + | chr7_1:52581215-52581234 | None:intergenic | 35.0% |
| !! | GTCATTTTCGAATGAAAGAC+TGG | - | chr7_1:52581234-52581253 | Msa1024090:CDS | 35.0% |
| TATTGTTTATCGCCATCATC+CGG | - | chr7_1:52581292-52581311 | Msa1024090:CDS | 35.0% | |
| GTTCTATCACATGACAATGA+TGG | - | chr7_1:52581344-52581363 | Msa1024090:intron | 35.0% | |
| TAGATGGAAGATTGAGAGAA+TGG | - | chr7_1:52581372-52581391 | Msa1024090:intron | 35.0% | |
| GCAGAGGTTTCACAAATTTA+GGG | + | chr7_1:52581628-52581647 | None:intergenic | 35.0% | |
| AGAAGCTAAAGGAAAAAAGG+GGG | - | chr7_1:52581703-52581722 | Msa1024090:CDS | 35.0% | |
| GAAAAAGAGAAGATTGTACC+GGG | + | chr7_1:52580311-52580330 | None:intergenic | 35.0% | |
| ATCAAACACTTTACGTGCAA+AGG | + | chr7_1:52580373-52580392 | None:intergenic | 35.0% | |
| AATGTCTCTAATCAGTGATC+AGG | + | chr7_1:52580463-52580482 | None:intergenic | 35.0% | |
| ! | GCTACTCCAAACAATTTTGT+TGG | - | chr7_1:52582130-52582149 | Msa1024090:CDS | 35.0% |
| ! | CTATCACAATTTTTACGAGG+GGG | + | chr7_1:52582428-52582447 | None:intergenic | 35.0% |
| ! | GCTATCACAATTTTTACGAG+GGG | + | chr7_1:52582429-52582448 | None:intergenic | 35.0% |
| ! | AACAGAGAAAAGTTGGTTGA+TGG | + | chr7_1:52582523-52582542 | None:intergenic | 35.0% |
| GAAACGAAACAGAGAAAAGT+TGG | + | chr7_1:52582530-52582549 | None:intergenic | 35.0% | |
| CCACATAAGAATTACGGATT+AGG | + | chr7_1:52582644-52582663 | None:intergenic | 35.0% | |
| CCTAATCCGTAATTCTTATG+TGG | - | chr7_1:52582641-52582660 | Msa1024090:intron | 35.0% | |
| CAAAGGCCACATAAGAATTA+CGG | + | chr7_1:52582650-52582669 | None:intergenic | 35.0% | |
| TTGCTTAATAAAGCGTGCTT+TGG | - | chr7_1:52582961-52582980 | Msa1024090:CDS | 35.0% | |
| TTGGTTTCAATTAACCATGG+AGG | - | chr7_1:52583017-52583036 | Msa1024090:CDS | 35.0% | |
| TAAGGGAATGCTTCTTTCTT+GGG | + | chr7_1:52583138-52583157 | None:intergenic | 35.0% | |
| ATAAGGGAATGCTTCTTTCT+TGG | + | chr7_1:52583139-52583158 | None:intergenic | 35.0% | |
| !! | AGCATTCCCTTATTTCTACA+AGG | - | chr7_1:52583146-52583165 | Msa1024090:five_prime_UTR | 35.0% |
| TCACCTTCGAATGAAAAACT+GGG | - | chr7_1:52583176-52583195 | Msa1024090:five_prime_UTR | 35.0% | |
| TATTGTTTATCGCCATCATC+CGG | - | chr7_1:52581292-52581311 | Msa1024090:CDS | 35.0% | |
| GTTCTATCACATGACAATGA+TGG | - | chr7_1:52581344-52581363 | Msa1024090:intron | 35.0% | |
| TCCACTAACCACTAATCAAA+GGG | + | chr7_1:52583663-52583682 | None:intergenic | 35.0% | |
| TTCCACTAACCACTAATCAA+AGG | + | chr7_1:52583664-52583683 | None:intergenic | 35.0% | |
| ! | GCAGTTGATGTATCGTGTTT+GGG | + | chr7_1:52579422-52579441 | None:intergenic | 40.0% |
| ! | TGCAGTTGATGTATCGTGTT+TGG | + | chr7_1:52579423-52579442 | None:intergenic | 40.0% |
| !! | AAACTGGCCTTAAACAGAGA+TGG | + | chr7_1:52579551-52579570 | None:intergenic | 40.0% |
| ACAAATTTAGGGAAACGCCT+GGG | + | chr7_1:52580122-52580141 | None:intergenic | 40.0% | |
| ! | TCTACCGTTTTCACAACAAC+CGG | - | chr7_1:52580148-52580167 | Msa1024090:CDS | 40.0% |
| AGAAGGTAGAGGAAAAAAGG+GGG | - | chr7_1:52580208-52580227 | Msa1024090:CDS | 40.0% | |
| AGCGGAGATAGAACTATCAT+TGG | - | chr7_1:52580248-52580267 | Msa1024090:intron | 40.0% | |
| ACATCCATCTCTCACATTCT+CGG | - | chr7_1:52580290-52580309 | Msa1024090:intron | 40.0% | |
| ! | AACGGAGAAAAGTTGGTTGA+TGG | + | chr7_1:52580579-52580598 | None:intergenic | 40.0% |
| AGCTCAATCAAAGAAGTCAC+AGG | + | chr7_1:52580759-52580778 | None:intergenic | 40.0% | |
| ! | GCATCTTTTCCTTTCCATCT+TGG | + | chr7_1:52580846-52580865 | None:intergenic | 40.0% |
| !! | GTATTGGTTTCAGTTAACCG+AGG | - | chr7_1:52581070-52581089 | Msa1024090:intron | 40.0% |
| ! | GACAATGATGGTGATCTAGA+TGG | - | chr7_1:52581356-52581375 | Msa1024090:intron | 40.0% |
| AAGTACGCACAATCTCTAGA+TGG | - | chr7_1:52581516-52581535 | Msa1024090:intron | 40.0% | |
| ACAAATTTAGGGAAACGCCT+GGG | + | chr7_1:52580122-52580141 | None:intergenic | 40.0% | |
| GGCAGAGGTTTCACAAATTT+AGG | + | chr7_1:52581629-52581648 | None:intergenic | 40.0% | |
| GGGAAAAGGAAAGAAGCTAA+AGG | - | chr7_1:52581692-52581711 | Msa1024090:CDS | 40.0% | |
| GCGAATGGTTGTATAGTCAT+GGG | - | chr7_1:52582021-52582040 | Msa1024090:CDS | 40.0% | |
| CGAATGGTTGTATAGTCATG+GGG | - | chr7_1:52582022-52582041 | Msa1024090:CDS | 40.0% | |
| ! | TTGATGGTTGACACTGAAAC+TGG | + | chr7_1:52580563-52580582 | None:intergenic | 40.0% |
| CTCGTGTTGAAAAAAGCTTG+AGG | + | chr7_1:52582616-52582635 | None:intergenic | 40.0% | |
| !!! | CAAGCTTTTTTCAACACGAG+AGG | - | chr7_1:52582616-52582635 | Msa1024090:intron | 40.0% |
| !! | TGGATCATTTTAGTAGCCTG+TGG | - | chr7_1:52580740-52580759 | Msa1024090:intron | 40.0% |
| AGCTCAATCAAAATAGCCAC+AGG | + | chr7_1:52582703-52582722 | None:intergenic | 40.0% | |
| ! | GCATCTTTTCCTTTCCATCT+TGG | + | chr7_1:52580846-52580865 | None:intergenic | 40.0% |
| TAGATAGAATGCTTCCTCCA+TGG | + | chr7_1:52583034-52583053 | None:intergenic | 40.0% | |
| !! | ATTAATGACGGTGCTGATAC+TGG | - | chr7_1:52583078-52583097 | Msa1024090:exon | 40.0% |
| GTCCCTTAAATGAAGAGTTG+TGG | - | chr7_1:52583100-52583119 | Msa1024090:five_prime_UTR | 40.0% | |
| CGCCACAACTCTTCATTTAA+GGG | + | chr7_1:52583105-52583124 | None:intergenic | 40.0% | |
| ACGCCACAACTCTTCATTTA+AGG | + | chr7_1:52583106-52583125 | None:intergenic | 40.0% | |
| CTCACCTTCGAATGAAAAAC+TGG | - | chr7_1:52583175-52583194 | Msa1024090:five_prime_UTR | 40.0% | |
| ! | CTACCCAGTTTTTCATTCGA+AGG | + | chr7_1:52583182-52583201 | None:intergenic | 40.0% |
| GAATGAAAAACTGGGTAGTG+AGG | - | chr7_1:52583184-52583203 | Msa1024090:five_prime_UTR | 40.0% | |
| CTGCTGTGTTTATGCAGAAA+GGG | + | chr7_1:52583549-52583568 | None:intergenic | 40.0% | |
| TCTGCTGTGTTTATGCAGAA+AGG | + | chr7_1:52583550-52583569 | None:intergenic | 40.0% | |
| ACCCTTTGATTAGTGGTTAG+TGG | - | chr7_1:52583659-52583678 | Msa1024090:five_prime_UTR | 40.0% | |
| ACCACCACCATCTCTGTTTA+AGG | - | chr7_1:52579541-52579560 | Msa1024090:CDS | 45.0% | |
| TACTCTCACTACCACAAGCT+CGG | + | chr7_1:52579977-52579996 | None:intergenic | 45.0% | |
| CTGGACTCACAATATCACTG+AGG | + | chr7_1:52580094-52580113 | None:intergenic | 45.0% | |
| CTCAGTGATATTGTGAGTCC+AGG | - | chr7_1:52580092-52580111 | Msa1024090:CDS | 45.0% | |
| CACAAATTTAGGGAAACGCC+TGG | + | chr7_1:52580123-52580142 | None:intergenic | 45.0% | |
| ! | TCCACCGGTTGTTGTGAAAA+CGG | + | chr7_1:52580155-52580174 | None:intergenic | 45.0% |
| TGTACCGAGAATGTGAGAGA+TGG | + | chr7_1:52580297-52580316 | None:intergenic | 45.0% | |
| AAGGTCAAATGGCACCAAGA+TGG | - | chr7_1:52580829-52580848 | Msa1024090:intron | 45.0% | |
| CAAATGGCACCAAGATGGAA+AGG | - | chr7_1:52580834-52580853 | Msa1024090:intron | 45.0% | |
| ACCTGTGAGGATAGTTGACA+AGG | - | chr7_1:52581043-52581062 | Msa1024090:intron | 45.0% | |
| TCCTTGTCAACTATCCTCAC+AGG | + | chr7_1:52581047-52581066 | None:intergenic | 45.0% | |
| TTGGTTTCAGTTAACCGAGG+AGG | - | chr7_1:52581073-52581092 | Msa1024090:intron | 45.0% | |
| TAGGTAGAATGCTTCCTCCT+CGG | + | chr7_1:52581090-52581109 | None:intergenic | 45.0% | |
| GAGCACCTCCATTAATCTTG+AGG | + | chr7_1:52581130-52581149 | None:intergenic | 45.0% | |
| AAAGACTGGGTAGTGAAGTC+AGG | - | chr7_1:52581248-52581267 | Msa1024090:CDS | 45.0% | |
| AAGACTGGGTAGTGAAGTCA+GGG | - | chr7_1:52581249-52581268 | Msa1024090:CDS | 45.0% | |
| CATTGCACAACTCGACTTCT+TGG | - | chr7_1:52581404-52581423 | Msa1024090:intron | 45.0% | |
| GATCTCTCACGACATTGTTC+TGG | + | chr7_1:52581545-52581564 | None:intergenic | 45.0% | |
| CTGGACTCACAATATCACTG+AGG | + | chr7_1:52580094-52580113 | None:intergenic | 45.0% | |
| CTCAGTGATATTGTGAGTCC+AGG | - | chr7_1:52580092-52580111 | Msa1024090:CDS | 45.0% | |
| CACAAATTTAGGGAAACGCC+TGG | + | chr7_1:52580123-52580142 | None:intergenic | 45.0% | |
| !!! | TCTGCCGTTTTCACAACAAC+CGG | - | chr7_1:52581643-52581662 | Msa1024090:CDS | 45.0% |
| ! | TCCACCGGTTGTTGTGAAAA+CGG | + | chr7_1:52580155-52580174 | None:intergenic | 45.0% |
| GGCGGAGATAGAACTATCAT+TGG | - | chr7_1:52581743-52581762 | Msa1024090:CDS | 45.0% | |
| ACATCCATCTCTCACATTCC+CGG | - | chr7_1:52581785-52581804 | Msa1024090:CDS | 45.0% | |
| GGCGAATGGTTGTATAGTCA+TGG | - | chr7_1:52582020-52582039 | Msa1024090:CDS | 45.0% | |
| GTATAGTCATGGGGTAGCAT+TGG | - | chr7_1:52582031-52582050 | Msa1024090:CDS | 45.0% | |
| AAGGTCAAATGGCACCAAGA+TGG | - | chr7_1:52580829-52580848 | Msa1024090:intron | 45.0% | |
| CAAATGGCACCAAGATGGAA+AGG | - | chr7_1:52580834-52580853 | Msa1024090:intron | 45.0% | |
| ACCTGTGAGGATAGTTGACA+AGG | - | chr7_1:52581043-52581062 | Msa1024090:intron | 45.0% | |
| TCCTTGTCAACTATCCTCAC+AGG | + | chr7_1:52581047-52581066 | None:intergenic | 45.0% | |
| CAGCACCGTCATTAATCTTG+AGG | + | chr7_1:52583074-52583093 | None:intergenic | 45.0% | |
| AAAAACTGGGTAGTGAGGTC+AGG | - | chr7_1:52583189-52583208 | Msa1024090:five_prime_UTR | 45.0% | |
| AAAACTGGGTAGTGAGGTCA+GGG | - | chr7_1:52583190-52583209 | Msa1024090:five_prime_UTR | 45.0% | |
| CTTTGCACAACTCGACTTCT+TGG | - | chr7_1:52583345-52583364 | Msa1024090:five_prime_UTR | 45.0% | |
| AAGAACGCACAATCTCCAGA+CGG | - | chr7_1:52583457-52583476 | Msa1024090:five_prime_UTR | 45.0% | |
| ! | GCCTTAAACAGAGATGGTGG+TGG | + | chr7_1:52579545-52579564 | None:intergenic | 50.0% |
| !! | CTGGCCTTAAACAGAGATGG+TGG | + | chr7_1:52579548-52579567 | None:intergenic | 50.0% |
| AAAGGTGAGATGAGAGCAGG+GGG | + | chr7_1:52579577-52579596 | None:intergenic | 50.0% | |
| GAAAGGTGAGATGAGAGCAG+GGG | + | chr7_1:52579578-52579597 | None:intergenic | 50.0% | |
| GGAAAGGTGAGATGAGAGCA+GGG | + | chr7_1:52579579-52579598 | None:intergenic | 50.0% | |
| AATTTAGGGAAACGCCTGGG+TGG | + | chr7_1:52580119-52580138 | None:intergenic | 50.0% | |
| ! | ACCGTTTTCACAACAACCGG+TGG | - | chr7_1:52580151-52580170 | Msa1024090:CDS | 50.0% |
| CCTGTTGAAGATGCTTCCAC+CGG | + | chr7_1:52580170-52580189 | None:intergenic | 50.0% | |
| !! | CGGTGGAAGCATCTTCAACA+GGG | - | chr7_1:52580168-52580187 | Msa1024090:CDS | 50.0% |
| !! | GGTGGAAGCATCTTCAACAG+GGG | - | chr7_1:52580169-52580188 | Msa1024090:CDS | 50.0% |
| GGGAAAGGGAAAGAAGGTAG+AGG | - | chr7_1:52580197-52580216 | Msa1024090:CDS | 50.0% | |
| ! | AAGGGGGCTACTTTGCTTAG+CGG | - | chr7_1:52580224-52580243 | Msa1024090:CDS | 50.0% |
| CATGCTTTGGTCAACCTGTG+AGG | - | chr7_1:52581030-52581049 | Msa1024090:intron | 50.0% | |
| AGACTGGGTAGTGAAGTCAG+GGG | - | chr7_1:52581250-52581269 | Msa1024090:CDS | 50.0% | |
| TTTATCGCCATCATCCGGCT+CGG | - | chr7_1:52581297-52581316 | Msa1024090:CDS | 50.0% | |
| AATTTAGGGAAACGCCTGGG+CGG | + | chr7_1:52580119-52580138 | None:intergenic | 50.0% | |
| GGTTGTTGTGAAAACGGCAG+AGG | + | chr7_1:52581644-52581663 | None:intergenic | 50.0% | |
| CCTGTTGAAGATGCTTCCAC+CGG | + | chr7_1:52580170-52580189 | None:intergenic | 50.0% | |
| !! | CGGTGGAAGCATCTTCAACA+GGG | - | chr7_1:52580168-52580187 | Msa1024090:CDS | 50.0% |
| !! | GGTGGAAGCATCTTCAACAG+GGG | - | chr7_1:52580169-52580188 | Msa1024090:CDS | 50.0% |
| ! | AAGGGGGCTACTTTGCTTAG+TGG | - | chr7_1:52580224-52580243 | Msa1024090:CDS | 50.0% |
| TGTACCGGGAATGTGAGAGA+TGG | + | chr7_1:52581792-52581811 | None:intergenic | 50.0% | |
| TGTCTATGTTCAGGGGCGAA+TGG | - | chr7_1:52582006-52582025 | Msa1024090:CDS | 50.0% | |
| !! | GTAGCATTGGCTACCCCAAA+AGG | - | chr7_1:52582044-52582063 | Msa1024090:CDS | 50.0% |
| TTTATCGCCATCATCCGGCT+CGG | - | chr7_1:52581297-52581316 | Msa1024090:CDS | 50.0% | |
| GGAGATTGTGCGTTCTTCGA+TGG | + | chr7_1:52583454-52583473 | None:intergenic | 50.0% | |
| !! | GGTTGGTCTTGGTTGGTGGA+CGG | + | chr7_1:52579494-52579513 | None:intergenic | 55.0% |
| GATCTGACAGAGGAGAGCGA+CGG | + | chr7_1:52579518-52579537 | None:intergenic | 55.0% | |
| !! | TGGTGGTGCTGATCTGACAG+AGG | + | chr7_1:52579528-52579547 | None:intergenic | 55.0% |
| GGGAAAGGTGAGATGAGAGC+AGG | + | chr7_1:52579580-52579599 | None:intergenic | 55.0% | |
| ATGCCTAGAGACCGAGCTTG+TGG | - | chr7_1:52579963-52579982 | Msa1024090:CDS | 55.0% | |
| CTACCACAAGCTCGGTCTCT+AGG | + | chr7_1:52579969-52579988 | None:intergenic | 55.0% | |
| !! | CCGGTGGAAGCATCTTCAAC+AGG | - | chr7_1:52580167-52580186 | Msa1024090:CDS | 55.0% |
| GCATCTTCAACAGGGGAGAG+CGG | - | chr7_1:52580176-52580195 | Msa1024090:CDS | 55.0% | |
| CATCTTCAACAGGGGAGAGC+GGG | - | chr7_1:52580177-52580196 | Msa1024090:CDS | 55.0% | |
| GAGAGCGGGAAAGGGAAAGA+AGG | - | chr7_1:52580191-52580210 | Msa1024090:CDS | 55.0% | |
| ! | GCTACTTTGCTTAGCGGCAG+CGG | - | chr7_1:52580230-52580249 | Msa1024090:CDS | 55.0% |
| GTGAAGTCAGGGGCTCAGTA+TGG | - | chr7_1:52581260-52581279 | Msa1024090:CDS | 55.0% | |
| TTATCGCCATCATCCGGCTC+GGG | - | chr7_1:52581298-52581317 | Msa1024090:CDS | 55.0% | |
| TACTCAGAATGCACCCGAGC+CGG | + | chr7_1:52581314-52581333 | None:intergenic | 55.0% | |
| GCTCGGGTGCATTCTGAGTA+TGG | - | chr7_1:52581314-52581333 | Msa1024090:CDS | 55.0% | |
| !! | GCCGTTTTCACAACAACCGG+TGG | - | chr7_1:52581646-52581665 | Msa1024090:CDS | 55.0% |
| !! | CCGGTGGAAGCATCTTCAAC+AGG | - | chr7_1:52580167-52580186 | Msa1024090:CDS | 55.0% |
| GCATCTTCAACAGGGGAGAG+CGG | - | chr7_1:52580176-52580195 | Msa1024090:CDS | 55.0% | |
| CATCTTCAACAGGGGAGAGC+GGG | - | chr7_1:52580177-52580196 | Msa1024090:CDS | 55.0% | |
| ! | GGGGCTACTTTGCTTAGTGG+CGG | - | chr7_1:52581722-52581741 | Msa1024090:CDS | 55.0% |
| ! | GCTACTTTGCTTAGTGGCGG+CGG | - | chr7_1:52581725-52581744 | Msa1024090:CDS | 55.0% |
| GTGAGGTCAGGGTCTCAGTA+TGG | - | chr7_1:52583201-52583220 | Msa1024090:five_prime_UTR | 55.0% | |
| TTATCGCCATCATCCGGCTC+GGG | - | chr7_1:52581298-52581317 | Msa1024090:CDS | 55.0% | |
| TACTCAGAATGCACCCGAGC+CGG | + | chr7_1:52581314-52581333 | None:intergenic | 55.0% | |
| GCTCGGGTGCATTCTGAGTA+TGG | - | chr7_1:52581314-52581333 | Msa1024090:CDS | 55.0% | |
| ! | CCATTGCTCTAGACTCCGTC+TGG | + | chr7_1:52583475-52583494 | None:intergenic | 55.0% |
| ! | CCAGACGGAGTCTAGAGCAA+TGG | - | chr7_1:52583472-52583491 | Msa1024090:five_prime_UTR | 55.0% |
| AGCATCAGTGCACCACCCAC+CGG | - | chr7_1:52579445-52579464 | Msa1024090:three_prime_UTR | 60.0% | |
| !! | TGGTGGGTTGTCGTTGGTGG+TGG | + | chr7_1:52579471-52579490 | None:intergenic | 60.0% |
| !! | CTTGGTTGGTGGACGGTGGT+GGG | + | chr7_1:52579487-52579506 | None:intergenic | 60.0% |
| !! | TCTTGGTTGGTGGACGGTGG+TGG | + | chr7_1:52579488-52579507 | None:intergenic | 60.0% |
| !! | TGGTCTTGGTTGGTGGACGG+TGG | + | chr7_1:52579491-52579510 | None:intergenic | 60.0% |
| TGAGAGCAGGGGGCAGAAAC+TGG | + | chr7_1:52579567-52579586 | None:intergenic | 60.0% | |
| TTGTGAGTCCAGGTCCACCC+AGG | - | chr7_1:52580102-52580121 | Msa1024090:CDS | 60.0% | |
| TCAACAGGGGAGAGCGGGAA+AGG | - | chr7_1:52580182-52580201 | Msa1024090:CDS | 60.0% | |
| CAACAGGGGAGAGCGGGAAA+GGG | - | chr7_1:52580183-52580202 | Msa1024090:CDS | 60.0% | |
| AATGCACCCGAGCCGGATGA+TGG | + | chr7_1:52581307-52581326 | None:intergenic | 60.0% | |
| CAACAGGGGAGAGCGGGAAA+AGG | - | chr7_1:52580183-52580202 | Msa1024090:CDS | 60.0% | |
| CGTGCTTTGGTCGACCTGTG+AGG | - | chr7_1:52582974-52582993 | Msa1024090:CDS | 60.0% | |
| AATGCACCCGAGCCGGATGA+TGG | + | chr7_1:52581307-52581326 | None:intergenic | 60.0% | |
| !! | TGTCGTTGGTGGTGGCCGGT+GGG | + | chr7_1:52579463-52579482 | None:intergenic | 65.0% |
| !! | TTGTCGTTGGTGGTGGCCGG+TGG | + | chr7_1:52579464-52579483 | None:intergenic | 65.0% |
| !! | GGGTTGTCGTTGGTGGTGGC+CGG | + | chr7_1:52579467-52579486 | None:intergenic | 65.0% |
| !! | CGGTGGTGGGTTGTCGTTGG+TGG | + | chr7_1:52579474-52579493 | None:intergenic | 65.0% |
| !! | GGACGGTGGTGGGTTGTCGT+TGG | + | chr7_1:52579477-52579496 | None:intergenic | 65.0% |
| !! | CGGCGGTTGGTCTTGGTTGG+TGG | + | chr7_1:52579498-52579517 | None:intergenic | 65.0% |
| !! | CGACGGCGGTTGGTCTTGGT+TGG | + | chr7_1:52579501-52579520 | None:intergenic | 65.0% |
| !! | AGAGCGACGGCGGTTGGTCT+TGG | + | chr7_1:52579505-52579524 | None:intergenic | 65.0% |
| CTGACAGAGGAGAGCGACGG+CGG | + | chr7_1:52579515-52579534 | None:intergenic | 65.0% | |
| TTGTGAGTCCAGGTCCGCCC+AGG | - | chr7_1:52581597-52581616 | Msa1024090:CDS | 65.0% | |
| CAGAGGAGAGCGACGGCGGT+TGG | + | chr7_1:52579511-52579530 | None:intergenic | 70.0% | |
| GGGAAACGCCTGGGTGGACC+TGG | + | chr7_1:52580113-52580132 | None:intergenic | 70.0% | |
| !! | CGTTGGTGGTGGCCGGTGGG+TGG | + | chr7_1:52579460-52579479 | None:intergenic | 75.0% |
| GGGAAACGCCTGGGCGGACC+TGG | + | chr7_1:52581608-52581627 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 52579343 | 52583685 | 52579343 | ID=Msa1024090;Name=Msa1024090 |
| chr7_1 | mRNA | 52579343 | 52583685 | 52579343 | ID=Msa1024090-mRNA-1;Parent=Msa1024090;Name=Msa1024090-mRNA-1;_AED=0.04;_eAED=0.04;_QI=590|0.66|0.5|1|0.66|0.5|4|173|618 |
| chr7_1 | exon | 52579343 | 52580252 | 52579343 | ID=Msa1024090-mRNA-1:exon:10447;Parent=Msa1024090-mRNA-1 |
| chr7_1 | exon | 52581222 | 52581344 | 52581222 | ID=Msa1024090-mRNA-1:exon:10446;Parent=Msa1024090-mRNA-1 |
| chr7_1 | exon | 52581579 | 52582196 | 52581579 | ID=Msa1024090-mRNA-1:exon:10445;Parent=Msa1024090-mRNA-1 |
| chr7_1 | exon | 52582717 | 52583685 | 52582717 | ID=Msa1024090-mRNA-1:exon:10444;Parent=Msa1024090-mRNA-1 |
| chr7_1 | five_prime_UTR | 52583096 | 52583685 | 52583096 | ID=Msa1024090-mRNA-1:five_prime_utr;Parent=Msa1024090-mRNA-1 |
| chr7_1 | CDS | 52582717 | 52583095 | 52582717 | ID=Msa1024090-mRNA-1:cds;Parent=Msa1024090-mRNA-1 |
| chr7_1 | CDS | 52581579 | 52582196 | 52581579 | ID=Msa1024090-mRNA-1:cds;Parent=Msa1024090-mRNA-1 |
| chr7_1 | CDS | 52581222 | 52581344 | 52581222 | ID=Msa1024090-mRNA-1:cds;Parent=Msa1024090-mRNA-1 |
| chr7_1 | CDS | 52579516 | 52580252 | 52579516 | ID=Msa1024090-mRNA-1:cds;Parent=Msa1024090-mRNA-1 |
| chr7_1 | three_prime_UTR | 52579343 | 52579515 | 52579343 | ID=Msa1024090-mRNA-1:three_prime_utr;Parent=Msa1024090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
