AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1154780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1154780 MtrunA17_Chr7g0246111 93.097 507 5 4 1 478 1 506 0.0 941
Msa1154780 MtrunA17_Chr6g0459561 48.495 299 143 5 189 477 362 659 1.03e-95 303
Msa1154780 MtrunA17_Chr6g0459541 44.720 322 134 6 195 477 28 344 9.60e-91 280
Msa1154780 MtrunA17_Chr4g0026631 43.168 322 145 4 192 476 110 430 8.06e-80 254
Msa1154780 MtrunA17_Chr2g0321241 42.991 321 145 4 193 476 116 435 1.11e-79 254
Msa1154780 MtrunA17_Chr6g0459551 39.200 375 170 10 143 475 44 402 2.71e-79 253
Msa1154780 MtrunA17_Chr4g0004121 38.320 381 209 7 117 477 154 528 3.11e-77 251
Msa1154780 MtrunA17_Chr4g0052271 51.012 247 117 3 194 438 104 348 1.66e-76 245
Msa1154780 MtrunA17_Chr4g0038101 44.326 282 142 5 209 476 721 1001 1.11e-70 242
Msa1154780 MtrunA17_Chr5g0397121 42.532 308 131 8 209 476 513 814 5.11e-70 238
Msa1154780 MtrunA17_Chr6g0459531 40.753 292 137 4 195 477 53 317 6.02e-70 225
Msa1154780 MtrunA17_Chr6g0462581 41.391 302 141 6 209 476 500 799 6.65e-67 229
Msa1154780 MtrunA17_Chr3g0127401 41.042 307 163 6 159 457 40 336 9.26e-66 216
Msa1154780 MtrunA17_Chr8g0387641 39.812 319 135 7 209 476 521 833 1.41e-65 226
Msa1154780 MtrunA17_Chr1g0195731 42.321 293 143 6 209 476 934 1225 2.24e-65 228
Msa1154780 MtrunA17_Chr1g0195741 41.638 293 145 6 209 476 938 1229 1.50e-64 226
Msa1154780 MtrunA17_Chr3g0127431 41.727 278 150 5 159 434 43 310 6.75e-64 212
Msa1154780 MtrunA17_Chr1g0202371 38.816 304 148 4 209 476 397 698 2.30e-62 215
Msa1154780 MtrunA17_Chr3g0116131 42.373 295 140 6 209 476 902 1193 3.68e-62 219
Msa1154780 MtrunA17_Chr1g0202381 41.463 287 148 6 160 434 416 694 1.27e-61 214
Msa1154780 MtrunA17_Chr1g0204031 48.035 229 114 3 209 434 557 783 1.40e-60 213
Msa1154780 MtrunA17_Chr1g0192151 35.294 289 161 8 181 453 130 408 8.65e-49 172
Msa1154780 MtrunA17_Chr4g0014731 35.294 289 161 8 181 453 131 409 1.23e-48 172
Msa1154780 MtrunA17_Chr7g0255721 39.464 261 140 8 207 459 683 933 2.39e-48 178
Msa1154780 MtrunA17_Chr7g0255721 33.032 221 143 3 214 432 391 608 1.59e-25 110
Msa1154780 MtrunA17_Chr1g0180791 39.630 270 146 5 204 459 200 466 8.73e-48 176
Msa1154780 MtrunA17_Chr1g0180791 38.627 233 134 5 207 433 476 705 3.15e-46 171
Msa1154780 MtrunA17_Chr3g0145011 37.770 278 153 8 208 478 138 402 4.03e-47 167
Msa1154780 MtrunA17_Chr7g0264521 39.259 270 147 5 204 459 201 467 7.37e-47 173
Msa1154780 MtrunA17_Chr7g0264521 39.056 233 133 5 207 433 477 706 1.79e-46 172
Msa1154780 MtrunA17_Chr2g0327121 38.627 233 134 5 207 433 478 707 5.15e-46 171
Msa1154780 MtrunA17_Chr2g0327121 42.308 234 127 5 204 433 202 431 3.44e-44 166
Msa1154780 MtrunA17_Chr3g0141901 37.681 276 152 8 208 476 135 397 7.67e-46 164
Msa1154780 MtrunA17_Chr4g0050561 36.397 272 153 8 192 454 139 399 1.75e-45 164
Msa1154780 MtrunA17_Chr7g0255641 37.453 267 145 8 207 463 656 910 7.06e-44 165
Msa1154780 MtrunA17_Chr7g0255641 32.609 276 163 7 210 468 394 663 6.31e-29 120
Msa1154780 MtrunA17_Chr7g0262801 35.878 262 153 6 197 452 175 427 8.19e-42 154
Msa1154780 MtrunA17_Chr1g0182711 35.496 262 154 6 197 452 176 428 1.05e-41 154
Msa1154780 MtrunA17_Chr7g0255901 32.143 336 193 10 158 475 601 919 3.60e-41 157
Msa1154780 MtrunA17_Chr2g0277831 35.870 276 162 6 207 470 531 803 5.83e-41 156
Msa1154780 MtrunA17_Chr2g0277831 29.568 301 162 9 211 468 245 538 1.22e-29 122
Msa1154780 MtrunA17_Chr4g0033451 34.672 274 159 6 208 463 379 650 6.32e-38 148
Msa1154780 MtrunA17_Chr3g0108321 40.104 192 107 4 207 392 157 346 1.20e-36 139
Msa1154780 MtrunA17_Chr8g0345461 33.884 242 149 6 198 432 154 391 2.63e-36 139
Msa1154780 MtrunA17_Chr3g0086411 35.106 282 152 10 207 462 213 489 7.81e-36 139
Msa1154780 MtrunA17_Chr3g0086411 29.075 227 117 7 296 478 7 233 7.63e-16 79.7
Msa1154780 MtrunA17_Chr2g0316851 35.652 230 138 4 211 432 596 823 1.25e-35 141
Msa1154780 MtrunA17_Chr3g0135721 36.047 258 151 8 208 459 223 472 1.56e-35 140
Msa1154780 MtrunA17_Chr5g0432631 34.201 269 162 8 198 459 217 477 2.60e-35 140
Msa1154780 MtrunA17_Chr8g0362771 37.445 227 130 8 208 428 236 456 4.72e-35 139
Msa1154780 MtrunA17_Chr7g0255651 36.052 233 140 5 207 433 280 509 9.05e-35 137
Msa1154780 MtrunA17_Chr7g0255651 29.964 277 167 10 216 476 24 289 7.65e-16 80.1
Msa1154780 MtrunA17_Chr1g0200081 33.884 242 148 7 198 432 164 400 3.70e-34 133
Msa1154780 MtrunA17_Chr4g0043381 33.829 269 162 6 188 445 810 1073 7.99e-34 135
Msa1154780 MtrunA17_Chr4g0043381 27.037 270 170 11 214 458 554 821 9.70e-12 67.8
Msa1154780 MtrunA17_Chr7g0255691 32.595 316 199 8 152 460 228 536 1.04e-33 134
Msa1154780 MtrunA17_Chr7g0255691 33.803 284 159 11 212 476 20 293 2.31e-27 115
Msa1154780 MtrunA17_Chr4g0052411 36.797 231 136 6 208 432 228 454 1.27e-33 134
Msa1154780 MtrunA17_Chr2g0297281 36.797 231 136 6 208 432 285 511 2.93e-33 133
Msa1154780 MtrunA17_Chr7g0217421 36.364 231 137 6 208 432 38 264 4.10e-33 129
Msa1154780 MtrunA17_Chr6g0456351 36.207 232 141 5 205 432 313 541 6.36e-33 132
Msa1154780 MtrunA17_Chr2g0327231 36.649 191 115 3 185 371 322 510 6.49e-33 130
Msa1154780 MtrunA17_Chr2g0327231 36.585 123 69 3 204 325 148 262 3.43e-15 77.8
Msa1154780 MtrunA17_Chr3g0143721 36.364 231 137 6 208 432 248 474 8.20e-33 132
Msa1154780 MtrunA17_Chr3g0135761 34.496 258 155 8 208 459 221 470 1.69e-32 131
Msa1154780 MtrunA17_Chr6g0476861 35.565 239 139 7 204 432 192 425 7.58e-32 129
Msa1154780 MtrunA17_Chr7g0260601 35.146 239 140 7 204 432 235 468 1.71e-31 128
Msa1154780 MtrunA17_Chr3g0086401 30.303 297 174 7 207 475 383 674 3.26e-31 127
Msa1154780 MtrunA17_Chr3g0086401 31.159 276 144 8 243 475 128 400 2.78e-26 112
Msa1154780 MtrunA17_Chr3g0104211 35.565 239 141 7 204 433 299 533 9.89e-31 126
Msa1154780 MtrunA17_Chr7g0248361 35.294 238 131 8 209 432 192 420 1.68e-30 125
Msa1154780 MtrunA17_Chr4g0031821 35.043 234 137 7 209 432 320 548 5.04e-30 124
Msa1154780 MtrunA17_Chr5g0429571 29.738 343 193 9 135 433 204 542 5.14e-30 124
Msa1154780 MtrunA17_Chr2g0331161 31.522 276 171 7 203 468 409 676 5.85e-29 120
Msa1154780 MtrunA17_Chr2g0289231 29.703 303 191 8 138 426 224 518 1.40e-28 119
Msa1154780 MtrunA17_Chr1g0158881 33.992 253 158 7 211 460 331 577 1.87e-28 119
Msa1154780 MtrunA17_Chr5g0432641 33.929 224 141 5 208 428 190 409 2.33e-28 118
Msa1154780 MtrunA17_Chr8g0388371 33.465 254 149 7 201 439 396 644 2.82e-28 119
Msa1154780 MtrunA17_Chr3g0094871 33.761 234 141 7 208 432 10 238 1.28e-27 114
Msa1154780 MtrunA17_Chr3g0129971 36.864 236 137 7 208 433 295 528 3.04e-27 115
Msa1154780 MtrunA17_Chr3g0135781 39.264 163 93 4 208 368 54 212 3.51e-27 108
Msa1154780 MtrunA17_Chr4g0047411 32.157 255 141 11 243 471 211 459 1.42e-22 101
Msa1154780 MtrunA17_Chr8g0357301 33.838 198 117 7 245 432 506 699 6.02e-19 90.5
Msa1154780 MtrunA17_Chr5g0432391 33.103 145 92 3 286 428 81 222 1.90e-14 75.1
Msa1154780 MtrunA17_Chr4g0062081 43.590 78 42 2 213 288 11 88 9.96e-14 67.0
Msa1154780 MtrunA17_Chr5g0404291 28.358 201 119 4 244 422 387 584 1.08e-13 73.6
Msa1154780 MtrunA17_Chr4g0039781 32.192 146 96 2 244 389 368 510 1.27e-12 70.1
Msa1154780 MtrunA17_Chr6g0450161 32.653 147 94 3 244 389 362 504 1.95e-12 69.3
Msa1154780 MtrunA17_Chr1g0190401 26.702 191 130 6 205 388 673 860 3.22e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1154780 AT2G45500.1 70.876 491 130 3 1 478 1 491 0.0 681
Msa1154780 AT2G45500.5 71.020 490 127 4 1 478 11 497 0.0 673
Msa1154780 AT2G45500.2 71.020 490 127 4 1 478 1 487 0.0 672
Msa1154780 AT2G45500.4 83.607 305 45 1 179 478 50 354 0.0 526
Msa1154780 AT2G45500.3 83.607 305 45 1 179 478 50 354 0.0 526
Msa1154780 AT3G27120.1 50.502 299 137 6 189 477 380 677 1.45e-96 306
Msa1154780 AT2G27600.1 43.168 322 145 4 192 476 112 432 8.81e-80 255
Msa1154780 AT1G80350.1 44.013 309 153 5 188 477 215 522 1.67e-78 254
Msa1154780 AT2G34560.1 43.478 299 151 5 194 477 85 380 1.01e-74 240
Msa1154780 AT2G34560.2 43.478 299 151 5 194 477 94 389 1.04e-74 240
Msa1154780 AT1G50140.2 43.038 316 158 8 179 476 658 969 2.32e-71 244
Msa1154780 AT1G50140.5 43.038 316 158 8 179 476 658 969 2.32e-71 244
Msa1154780 AT1G50140.3 43.038 316 158 8 179 476 680 991 3.21e-71 244
Msa1154780 AT1G50140.1 43.038 316 158 8 179 476 680 991 3.21e-71 244
Msa1154780 AT1G50140.4 43.038 316 158 8 179 476 680 991 3.21e-71 244
Msa1154780 AT3G19740.1 42.089 316 161 8 179 476 670 981 1.91e-70 242
Msa1154780 AT4G27680.1 41.275 298 161 5 165 454 42 333 3.66e-68 223
Msa1154780 AT1G64110.1 41.967 305 135 8 208 476 512 810 1.10e-67 232
Msa1154780 AT1G64110.2 41.967 305 135 8 208 476 517 815 1.20e-67 232
Msa1154780 AT1G64110.4 41.967 305 135 8 208 476 517 815 1.20e-67 232
Msa1154780 AT1G64110.5 41.967 305 135 8 208 476 515 813 1.26e-67 232
Msa1154780 AT1G64110.3 41.967 305 135 8 208 476 515 813 1.26e-67 232
Msa1154780 AT4G02480.1 42.662 293 142 5 209 476 960 1251 2.35e-66 232
Msa1154780 AT5G53540.1 40.604 298 163 5 165 454 45 336 4.22e-66 218
Msa1154780 AT4G28000.2 40.461 304 143 6 209 476 517 818 5.77e-66 227
Msa1154780 AT4G28000.1 40.461 304 143 6 209 476 515 816 6.42e-66 227
Msa1154780 AT5G52882.1 40.132 304 144 5 209 476 514 815 8.86e-66 227
Msa1154780 AT4G28000.3 47.368 228 116 3 209 434 517 742 2.34e-65 225
Msa1154780 AT4G24860.1 46.888 241 124 3 197 434 805 1044 1.57e-64 226
Msa1154780 AT4G24860.4 46.888 241 124 3 197 434 778 1017 1.58e-64 226
Msa1154780 AT4G24860.3 46.888 241 124 3 197 434 803 1042 1.67e-64 226
Msa1154780 AT4G24860.2 46.888 241 124 3 197 434 801 1040 1.86e-64 226
Msa1154780 AT1G02890.1 42.321 293 143 5 209 476 941 1232 1.39e-63 224
Msa1154780 AT1G62130.2 37.329 292 147 6 209 476 743 1022 8.63e-50 183
Msa1154780 AT1G62130.1 37.201 293 148 6 208 476 749 1029 1.03e-49 183
Msa1154780 AT3G56690.1 39.502 281 150 8 188 459 700 969 1.13e-48 180
Msa1154780 AT3G56690.1 35.747 221 138 2 214 432 387 605 3.36e-34 137
Msa1154780 AT1G09100.1 35.294 289 161 8 181 453 130 408 3.64e-48 171
Msa1154780 AT3G05530.1 35.052 291 163 8 179 453 129 409 5.98e-48 171
Msa1154780 AT1G02890.2 37.201 293 130 6 209 476 941 1204 1.77e-47 176
Msa1154780 AT3G09840.1 37.762 286 159 6 204 473 199 481 2.29e-46 172
Msa1154780 AT3G09840.1 39.316 234 132 5 207 433 475 705 3.35e-44 166
Msa1154780 AT5G43010.1 37.770 278 149 9 208 476 135 397 2.35e-46 166
Msa1154780 AT5G03340.1 38.889 270 148 5 204 459 199 465 3.32e-46 172
Msa1154780 AT5G03340.1 39.485 233 132 5 207 433 475 704 2.00e-45 169
Msa1154780 AT1G45000.1 37.681 276 152 8 208 476 135 397 5.26e-46 165
Msa1154780 AT3G53230.1 38.519 270 149 5 204 459 200 466 7.16e-46 171
Msa1154780 AT3G53230.1 39.056 233 133 5 207 433 476 705 6.41e-45 168
Msa1154780 AT5G20000.1 36.765 272 152 8 192 454 141 401 1.35e-44 162
Msa1154780 AT5G19990.1 36.765 272 152 8 192 454 141 401 1.41e-44 162
Msa1154780 AT5G19990.3 36.765 272 152 8 192 454 141 401 1.41e-44 162
Msa1154780 AT5G19990.2 36.765 272 152 8 192 454 83 343 1.80e-44 160
Msa1154780 AT1G03000.1 35.417 288 163 6 207 475 653 936 5.44e-43 163
Msa1154780 AT4G29040.1 36.641 262 151 6 197 452 173 425 5.61e-43 158
Msa1154780 AT2G20140.1 36.641 262 151 6 197 452 173 425 1.13e-42 157
Msa1154780 AT3G01610.1 36.900 271 154 7 207 464 523 789 1.24e-41 159
Msa1154780 AT3G01610.1 32.500 240 140 5 211 434 232 465 4.22e-28 118
Msa1154780 AT3G01610.2 36.900 271 154 7 207 464 523 789 1.25e-41 159
Msa1154780 AT3G01610.2 32.500 240 140 5 211 434 232 465 4.38e-28 118
Msa1154780 AT5G58290.1 37.768 233 136 5 207 433 150 379 3.48e-41 152
Msa1154780 AT3G15120.1 36.245 229 136 4 211 431 718 944 2.12e-37 147
Msa1154780 AT3G15120.2 36.245 229 136 4 211 431 728 954 2.22e-37 147
Msa1154780 AT2G03670.1 34.752 282 167 8 198 472 272 543 3.38e-36 141
Msa1154780 AT2G03670.1 35.842 279 153 11 213 476 23 290 2.92e-34 136
Msa1154780 AT1G05910.1 34.307 274 156 8 209 462 378 647 5.33e-36 142
Msa1154780 AT1G53750.1 33.884 242 149 6 198 432 154 391 6.04e-36 138
Msa1154780 AT2G03670.2 35.842 279 153 11 213 476 23 290 3.76e-35 136
Msa1154780 AT2G03670.2 42.000 150 82 2 198 342 272 421 3.02e-23 102
Msa1154780 AT3G02450.1 37.190 242 137 7 205 438 327 561 5.21e-35 138
Msa1154780 AT1G06430.1 36.797 231 136 6 208 432 216 442 1.02e-33 135
Msa1154780 AT1G06430.3 36.797 231 136 6 208 432 216 442 1.02e-33 135
Msa1154780 AT1G06430.2 36.797 231 136 6 208 432 216 442 1.02e-33 135
Msa1154780 AT2G30950.1 36.364 231 137 6 208 432 223 449 1.70e-33 134
Msa1154780 AT2G30950.2 36.364 231 137 6 208 432 223 449 1.70e-33 134
Msa1154780 AT2G30950.3 36.364 231 137 6 208 432 223 449 1.70e-33 134
Msa1154780 AT2G30950.4 36.364 231 137 6 208 432 227 453 1.86e-33 134
Msa1154780 AT5G42270.1 37.229 231 135 6 208 432 246 472 1.87e-33 134
Msa1154780 AT2G26140.1 35.156 256 156 7 208 459 223 472 3.17e-33 134
Msa1154780 AT1G50250.1 36.364 231 137 6 208 432 258 484 9.76e-33 132
Msa1154780 AT1G53780.1 32.780 241 151 6 198 431 326 562 1.22e-32 131
Msa1154780 AT1G53780.4 32.780 241 151 6 198 431 326 562 1.22e-32 131
Msa1154780 AT1G53780.3 32.780 241 151 6 198 431 325 561 1.28e-32 131
Msa1154780 AT1G53780.2 32.780 241 151 6 198 431 347 583 1.32e-32 131
Msa1154780 AT1G07510.1 35.417 240 140 7 209 438 324 558 3.01e-32 131
Msa1154780 AT5G08470.3 35.526 228 137 5 211 433 834 1056 3.58e-32 131
Msa1154780 AT5G08470.1 35.526 228 137 5 211 433 843 1065 3.87e-32 131
Msa1154780 AT2G29080.1 35.146 239 141 7 209 438 319 552 2.04e-31 128
Msa1154780 AT3G47060.1 30.220 364 196 11 117 438 209 556 3.20e-31 128
Msa1154780 AT5G15250.1 35.498 231 139 6 208 432 220 446 4.49e-31 127
Msa1154780 AT5G53170.1 35.294 255 152 8 211 460 361 607 2.39e-30 125
Msa1154780 AT5G58870.1 30.887 327 180 9 150 433 232 555 1.12e-29 123
Msa1154780 AT4G23940.1 35.968 253 144 6 201 439 419 667 1.26e-29 123
Msa1154780 AT5G15250.2 33.202 253 138 8 208 432 220 469 2.15e-28 118
Msa1154780 AT5G64580.1 32.993 294 163 9 152 433 274 545 3.87e-28 119
Msa1154780 AT4G04180.2 31.489 235 141 7 204 426 306 532 1.09e-26 114
Msa1154780 AT4G04180.1 31.489 235 141 7 204 426 311 537 1.30e-26 113
Msa1154780 AT3G16290.1 30.249 281 172 8 203 473 401 667 1.02e-25 111
Msa1154780 AT1G45000.2 38.849 139 79 3 208 341 135 272 5.54e-25 105
Msa1154780 AT5G08470.2 37.037 135 80 2 211 342 843 975 4.97e-22 100
Msa1154780 AT4G04910.1 31.395 258 139 11 243 471 248 496 1.81e-21 98.2
Msa1154780 AT1G79560.3 34.804 204 119 6 245 438 526 725 3.37e-21 97.8
Msa1154780 AT1G79560.1 34.804 204 119 6 245 438 526 725 3.60e-21 97.8
Msa1154780 AT1G79560.2 34.804 204 119 6 245 438 526 725 4.31e-21 97.4
Msa1154780 AT2G18330.1 32.394 142 91 3 244 384 384 521 2.26e-13 72.8
Msa1154780 AT5G16930.1 32.192 146 94 3 244 388 397 538 2.60e-12 69.7
Msa1154780 AT4G24710.1 32.716 162 89 4 246 389 203 362 2.71e-12 69.3
Msa1154780 AT4G24710.3 32.716 162 89 4 246 389 215 374 2.74e-12 69.3
Msa1154780 AT4G36580.1 31.690 142 92 3 244 384 381 518 4.27e-12 68.9
Msa1154780 AT3G03060.1 30.882 204 112 6 244 422 385 584 5.83e-12 68.6

Find 108 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGATGTTTGACTAGGTTTC+GGG 0.221153 7_4:-42409721 None:intergenic
TTTCAAGGCAATATGATTTC+AGG 0.222782 7_4:-42413100 None:intergenic
AGGAGAGAAAACAGAGTTAA+AGG 0.225077 7_4:-42407778 None:intergenic
ATCCAATTCCTGTGGCTTAT+TGG 0.227753 7_4:-42411838 None:intergenic
CAGCTTCCTTGACGTCAAAA+TGG 0.244361 7_4:+42410194 Msa1154780:CDS
CAAGTTTAAACAAAAGTAAA+TGG 0.245979 7_4:+42412893 Msa1154780:CDS
CATTGAAGAAGCACTGAAAT+TGG 0.247194 7_4:-42407823 None:intergenic
GACAAGGGCACCAAAGTTTA+TGG 0.255512 7_4:+42413039 Msa1154780:three_prime_UTR
CCAGATGTTTGACTAGGTTT+CGG 0.283554 7_4:-42409722 None:intergenic
GATGACATTGTGATTGTAAT+TGG 0.285252 7_4:+42411139 Msa1154780:CDS
TTTGAGATTTATCATAGATT+TGG 0.310939 7_4:-42407614 None:intergenic
AAAGGCAAAGCAAGCTTTAA+TGG 0.312478 7_4:+42409911 Msa1154780:CDS
AGGTAGCTCATTTGCCAATC+AGG 0.328156 7_4:+42409380 Msa1154780:intron
AATTGGATGATGCCGTTCTT+AGG 0.330851 7_4:+42411853 Msa1154780:CDS
GTAGTATTTGATAGTTTAGT+TGG 0.333617 7_4:-42409641 None:intergenic
AACAAGTCTCTTCTCTTTGT+TGG 0.337816 7_4:-42409948 None:intergenic
CTTTACCAAATGAAAATGTT+AGG 0.342458 7_4:+42412146 Msa1154780:CDS
ACCTTCTTCTCCTTCTTCTT+CGG 0.351247 7_4:+42407854 Msa1154780:CDS
ATGTTGAAACTATTTATTGA+TGG 0.354439 7_4:+42413073 Msa1154780:three_prime_UTR
AAGAAATCGATAAAGCTGTT+AGG 0.359640 7_4:+42407931 Msa1154780:CDS
TTAGAACCCAGCTCTCTAAT+TGG 0.361235 7_4:-42412683 None:intergenic
GAATTCCTTATCCAGTTTGA+TGG 0.364436 7_4:+42411100 Msa1154780:CDS
CTCTTTGGTCCGCCTGGTAA+TGG 0.372609 7_4:+42410109 Msa1154780:CDS
GAGAGATGGAATGAGGAGTT+TGG 0.374466 7_4:+42412925 Msa1154780:CDS
GCTTGTACGGACACTATTCT+TGG 0.381631 7_4:+42410338 Msa1154780:CDS
TGATTCTGAAGCCACTGCTT+TGG 0.387336 7_4:-42410146 None:intergenic
ATTTAAAACAAAGCCTTTCA+AGG 0.392962 7_4:-42413115 None:intergenic
AATTCCTTATCCAGTTTGAT+GGG 0.396055 7_4:+42411101 Msa1154780:CDS
AACCAATAAGCCACAGGAAT+TGG 0.397626 7_4:+42411836 Msa1154780:CDS
AGCTGTTAGGGCTGAAGAAT+GGG 0.399219 7_4:+42407944 Msa1154780:CDS
TAGGGCTGAAGAATGGGGTT+TGG 0.399472 7_4:+42407950 Msa1154780:CDS
CAATTTCAGTGCTTCTTCAA+TGG 0.404872 7_4:+42407824 Msa1154780:CDS
CATAAAAGTGATTATGCAAA+AGG 0.419153 7_4:-42407699 None:intergenic
TGGATGTCACCCCATCAAAC+TGG 0.427668 7_4:-42411111 None:intergenic
ACAAGTTTCTGAGAGATTGC+AGG 0.447126 7_4:+42409227 Msa1154780:CDS
TCGTTTGAAACCGAAGAAGA+AGG 0.449660 7_4:-42407864 None:intergenic
CACGTGTATGTATAATATAA+TGG 0.451025 7_4:-42413176 None:intergenic
TCACCCCATCAAACTGGATA+AGG 0.451624 7_4:-42411105 None:intergenic
AAGCTGTTAGGGCTGAAGAA+TGG 0.453233 7_4:+42407943 Msa1154780:CDS
AAATCCAGGTGGCCTGGAAA+AGG 0.456194 7_4:+42409893 Msa1154780:intron
AGCTTCCTTGACGTCAAAAT+GGG 0.456655 7_4:+42410195 Msa1154780:CDS
AGAAATCGATAAAGCTGTTA+GGG 0.462705 7_4:+42407932 Msa1154780:CDS
TTGCTTCTCTTTGGTCCGCC+TGG 0.465849 7_4:+42410103 Msa1154780:CDS
AATGGCAACCATTCCATTCA+AGG 0.471071 7_4:-42413158 None:intergenic
ATCGTCAAAAGATATCAAAA+TGG 0.471460 7_4:+42409199 Msa1154780:CDS
CCATTCAAGGCTGTATTGCC+AGG 0.472571 7_4:-42413145 None:intergenic
TCAAAAGATATCAAAATGGC+AGG 0.473502 7_4:+42409203 Msa1154780:CDS
CCTGGCAATACAGCCTTGAA+TGG 0.483864 7_4:+42413145 Msa1154780:three_prime_UTR
TTCCTTCATTCATCACTCCC+AGG 0.485135 7_4:+42408039 Msa1154780:CDS
TGAAATCATATTGCCTTGAA+AGG 0.485549 7_4:+42413102 Msa1154780:three_prime_UTR
CATTGCAGCTTCTTCACACA+AGG 0.491414 7_4:-42412657 None:intergenic
TTATCGAAATCCAGGTGGCC+TGG 0.491589 7_4:+42409887 Msa1154780:intron
AATGGGAAGAGCTTGAGAGA+TGG 0.492767 7_4:+42412911 Msa1154780:CDS
CCGAAACCTAGTCAAACATC+TGG 0.497956 7_4:+42409722 Msa1154780:CDS
AGCAGTTTGTGCACGGTTTG+AGG 0.498983 7_4:-42409612 None:intergenic
AATCACAATGTCATCAGGAT+TGG 0.499345 7_4:-42411131 None:intergenic
TTCACTACAGGAATGCTCAT+AGG 0.499729 7_4:+42407988 Msa1154780:CDS
TGAAAATTATGATACGAAAC+TGG 0.500786 7_4:+42409745 Msa1154780:CDS
AGCCACTGCTTTGGCAAGCA+TGG 0.503878 7_4:-42410137 None:intergenic
ATTACAATCACAATGTCATC+AGG 0.507002 7_4:-42411136 None:intergenic
ATGACGCTATTCTTCACTAC+AGG 0.510224 7_4:+42407976 Msa1154780:CDS
AATGATGCCAATTAGAGAGC+TGG 0.511129 7_4:+42412676 Msa1154780:CDS
AGCACGTCGCTTACTAGGTA+AGG 0.512942 7_4:-42412209 None:intergenic
GAGAACATAGCATACCTGAT+TGG 0.513560 7_4:-42409394 None:intergenic
AGAGCTTGAGAGATGGAATG+AGG 0.517140 7_4:+42412918 Msa1154780:CDS
AAGTTTAAACAAAAGTAAAT+GGG 0.518697 7_4:+42412894 Msa1154780:CDS
ACCGAAGAAGAAGGAGAAGA+AGG 0.522002 7_4:-42407855 None:intergenic
AGGTAGAGATCTAGAGATGC+TGG 0.523797 7_4:+42412454 Msa1154780:intron
GCATGGTTTACAGGATACTC+TGG 0.534864 7_4:+42412620 Msa1154780:intron
CAGGCTCTCAGTAGACGAGC+AGG 0.535200 7_4:+42409246 Msa1154780:CDS
ATAGAAGTCCTTCTGTTCGA+TGG 0.538003 7_4:+42409795 Msa1154780:CDS
AAAGCAAGCTTTAATGGAGA+TGG 0.543064 7_4:+42409917 Msa1154780:CDS
TCCAAGGCAATACCTCTAGC+TGG 0.549612 7_4:-42409987 None:intergenic
GGAGTGATGAATGAAGGAAC+AGG 0.553232 7_4:-42408035 None:intergenic
GGTAAGAGGACTGAGGTATG+AGG 0.557226 7_4:+42412840 Msa1154780:intron
CACCTGGGAGTGATGAATGA+AGG 0.559377 7_4:-42408041 None:intergenic
AAGAGAAGAGACTTGTTCAC+TGG 0.560846 7_4:+42409954 Msa1154780:CDS
TCTGCTAAAACACAAACTCA+AGG 0.566087 7_4:+42412174 Msa1154780:CDS
TAGAAGTCCTTCTGTTCGAT+GGG 0.566235 7_4:+42409796 Msa1154780:CDS
AGCATGGTCTTACCATTACC+AGG 0.568160 7_4:-42410121 None:intergenic
ATGATGCCAATTAGAGAGCT+GGG 0.568226 7_4:+42412677 Msa1154780:CDS
TCTGTTCGATGGGACGATGT+TGG 0.570316 7_4:+42409806 Msa1154780:CDS
GAACTGCAGCAGTTTGTGCA+CGG 0.573485 7_4:-42409619 None:intergenic
TGATGCCGTTCTTAGGAGAC+TGG 0.580216 7_4:+42411860 Msa1154780:CDS
GTGAAGCTGAAAAGCTTGTA+CGG 0.588120 7_4:+42410325 Msa1154780:CDS
ACATCGTCCCATCGAACAGA+AGG 0.588663 7_4:-42409803 None:intergenic
AAGGACGACAAATGAAAATG+AGG 0.591136 7_4:+42411057 Msa1154780:CDS
AGGTGCAACCAATAAGCCAC+AGG 0.594898 7_4:+42411830 Msa1154780:intron
CAATACAGCCTTGAATGGAA+TGG 0.604940 7_4:+42413150 Msa1154780:three_prime_UTR
CTGAAATGTAGAGCAAGACA+AGG 0.607620 7_4:+42413023 Msa1154780:three_prime_UTR
GACCATGCTTGCCAAAGCAG+TGG 0.609312 7_4:+42410135 Msa1154780:CDS
GAGTAGAACTAGCTTCGAGA+AGG 0.613002 7_4:-42408013 None:intergenic
TCATCAATGAAAATTACAGA+TGG 0.615857 7_4:-42410378 None:intergenic
GCTGTTAGGGCTGAAGAATG+GGG 0.620550 7_4:+42407945 Msa1154780:CDS
ATTCCTTATCCAGTTTGATG+GGG 0.624550 7_4:+42411102 Msa1154780:CDS
GAATCCTCAAAGAAAAGATG+AGG 0.629125 7_4:+42409682 Msa1154780:CDS
TCTCACCAGTCTCCTAAGAA+CGG 0.637516 7_4:-42411865 None:intergenic
CTGCTAAAACACAAACTCAA+GGG 0.643305 7_4:+42412175 Msa1154780:CDS
AGAAGGACTTCTATCTACAA+TGG 0.646183 7_4:-42409786 None:intergenic
CAAAAGATATCAAAATGGCA+GGG 0.647481 7_4:+42409204 Msa1154780:CDS
TGAGGACTTCAAGAAAGCAA+TGG 0.650387 7_4:+42412858 Msa1154780:CDS
TTTACCAGGTAAGAGGACTG+AGG 0.669745 7_4:+42412833 Msa1154780:intron
ACGGCATCATCCAATTCCTG+TGG 0.676070 7_4:-42411846 None:intergenic
TGAAATGTAGAGCAAGACAA+GGG 0.680291 7_4:+42413024 Msa1154780:three_prime_UTR
GGTCTTCGAAGACCAGCTAG+AGG 0.690852 7_4:+42409975 Msa1154780:CDS
TTGATAGTATAATGTCAACA+AGG 0.721787 7_4:+42411038 Msa1154780:CDS
ATGCTGGTAAAAGAAACCGA+AGG 0.728590 7_4:+42412470 Msa1154780:CDS
ATGGTCTTACCATTACCAGG+CGG 0.798518 7_4:-42410118 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTCAATTAAAATAAATTTA+TGG - chr7_4:42408862-42408881 None:intergenic 10.0%
!! CAAAAAATCATTTAATACAA+GGG - chr7_4:42410526-42410545 None:intergenic 15.0%
!! ACAAAAAATCATTTAATACA+AGG - chr7_4:42410527-42410546 None:intergenic 15.0%
!! TTTCATCTTCTAATTAAAAT+AGG + chr7_4:42410659-42410678 Msa1154780:intron 15.0%
!! TGTTTAATTAGTTAAATAGA+TGG + chr7_4:42410919-42410938 Msa1154780:intron 15.0%
!! ATGCAATTATAATTATTAGA+TGG + chr7_4:42411443-42411462 Msa1154780:intron 15.0%
!! TGCAATTATAATTATTAGAT+GGG + chr7_4:42411444-42411463 Msa1154780:intron 15.0%
!! CAAAAATAATGAATCATATT+TGG - chr7_4:42412596-42412615 None:intergenic 15.0%
!!! TTATTTTTTTTGTTTTTACC+AGG + chr7_4:42412819-42412838 Msa1154780:intron 15.0%
!! AAGTTTAAACAAAAGTAAAT+GGG + chr7_4:42412894-42412913 Msa1154780:CDS 15.0%
!!! ATTAATTTTACCATAAACTT+TGG - chr7_4:42413052-42413071 None:intergenic 15.0%
!!! TTTGAGATTTATCATAGATT+TGG - chr7_4:42407617-42407636 None:intergenic 20.0%
!!! ATTTGAATGATTTGTTTATG+TGG + chr7_4:42408118-42408137 Msa1154780:intron 20.0%
!!! TTTGAATGATTTGTTTATGT+GGG + chr7_4:42408119-42408138 Msa1154780:intron 20.0%
!!! TTTTTTCATTGATTAGTTGA+AGG + chr7_4:42408158-42408177 Msa1154780:intron 20.0%
!!! TTTTTCATTGATTAGTTGAA+GGG + chr7_4:42408159-42408178 Msa1154780:intron 20.0%
!! TGATTTAATATTTGTGTTGT+TGG + chr7_4:42408214-42408233 Msa1154780:intron 20.0%
!!! CTATTATTCAACTTTGATTT+TGG - chr7_4:42408607-42408626 None:intergenic 20.0%
!!! AGTTAAAATCTCTCTATTTT+TGG + chr7_4:42408764-42408783 Msa1154780:intron 20.0%
!! GATAATAAGAATCAAACAAA+TGG - chr7_4:42409872-42409891 None:intergenic 20.0%
!! ATGAAAACTATAATTCTTTG+AGG + chr7_4:42410469-42410488 Msa1154780:intron 20.0%
!!! ATGATTTTTTGTTTAATGCT+TGG + chr7_4:42410535-42410554 Msa1154780:intron 20.0%
!!! AGTAATCTACCTTTTTTTTT+TGG - chr7_4:42410700-42410719 None:intergenic 20.0%
!! ATTTACTAAACAGAAAGAAA+AGG + chr7_4:42410942-42410961 Msa1154780:intron 20.0%
!! TTAATATCATTTGAATGAAG+TGG - chr7_4:42410994-42411013 None:intergenic 20.0%
!! TTTAAAAGTGAAAACAAGAT+AGG - chr7_4:42411566-42411585 None:intergenic 20.0%
!!! ATATAAAAGTTTAGTATCGA+GGG - chr7_4:42412243-42412262 None:intergenic 20.0%
!!! AACTTTTATATGCATATTCT+TGG + chr7_4:42412252-42412271 Msa1154780:intron 20.0%
!! ATGCAAAAAAATTACCAATT+GGG + chr7_4:42412294-42412313 Msa1154780:intron 20.0%
!!! TTTTATTGTGTCCAAAATTT+GGG + chr7_4:42412568-42412587 Msa1154780:intron 20.0%
!!! TTCATTATTTTTGTTTTGCA+TGG + chr7_4:42412603-42412622 Msa1154780:intron 20.0%
!! ATAATTAACCTTAACAACAA+AGG - chr7_4:42412803-42412822 None:intergenic 20.0%
!!! CATTTACTTTTGTTTAAACT+TGG - chr7_4:42412895-42412914 None:intergenic 20.0%
!! CAAGTTTAAACAAAAGTAAA+TGG + chr7_4:42412893-42412912 Msa1154780:CDS 20.0%
!! ATGTTGAAACTATTTATTGA+TGG + chr7_4:42413073-42413092 Msa1154780:three_prime_UTR 20.0%
!!! AAAGGCTTTGTTTTAAATTT+AGG + chr7_4:42413120-42413139 Msa1154780:three_prime_UTR 20.0%
!!! AAGGCTTTGTTTTAAATTTA+GGG + chr7_4:42413121-42413140 Msa1154780:three_prime_UTR 20.0%
! CATAAAAGTGATTATGCAAA+AGG - chr7_4:42407702-42407721 None:intergenic 25.0%
! GTTTCTGCTATATTAATGAT+GGG + chr7_4:42408066-42408085 Msa1154780:intron 25.0%
!!! TTTTCATTGATTAGTTGAAG+GGG + chr7_4:42408160-42408179 Msa1154780:intron 25.0%
! TTATCTTGTTAGAGTATGTT+TGG + chr7_4:42408351-42408370 Msa1154780:intron 25.0%
!! TTTTGACAAAAGCTATACTT+TGG + chr7_4:42408529-42408548 Msa1154780:intron 25.0%
! TCTTCAATTGACAGTAATTA+AGG - chr7_4:42408640-42408659 None:intergenic 25.0%
! TACAAACTTACATACGTTTA+TGG - chr7_4:42408820-42408839 None:intergenic 25.0%
! GCTAAAAGTTAATCCAATTT+CGG + chr7_4:42408893-42408912 Msa1154780:intron 25.0%
! ATTATAACTAAGACCGAAAT+TGG - chr7_4:42408909-42408928 None:intergenic 25.0%
! TATGATTAACTCACTGAATT+CGG - chr7_4:42409007-42409026 None:intergenic 25.0%
! AATTCAGTGAGTTAATCATA+AGG + chr7_4:42409007-42409026 Msa1154780:intron 25.0%
! ATTCAGTGAGTTAATCATAA+GGG + chr7_4:42409008-42409027 Msa1154780:intron 25.0%
! CAACAAAAACATAAGATCAT+AGG - chr7_4:42409120-42409139 None:intergenic 25.0%
!!! CTATGATCTTATGTTTTTGT+TGG + chr7_4:42409118-42409137 Msa1154780:intron 25.0%
! ATCGTCAAAAGATATCAAAA+TGG + chr7_4:42409199-42409218 Msa1154780:CDS 25.0%
! AATTCTCGTAAAAGTCAAAA+CGG - chr7_4:42409309-42409328 None:intergenic 25.0%
! TGGAGAAAAAGGAATATTAA+TGG - chr7_4:42409575-42409594 None:intergenic 25.0%
!!! ACAAACATTTTTGGAGAAAA+AGG - chr7_4:42409586-42409605 None:intergenic 25.0%
!! GTAGTATTTGATAGTTTAGT+TGG - chr7_4:42409644-42409663 None:intergenic 25.0%
! TGAAAATTATGATACGAAAC+TGG + chr7_4:42409745-42409764 Msa1154780:CDS 25.0%
!!! AGCAACATTTTTTAATGTCA+CGG + chr7_4:42410171-42410190 Msa1154780:CDS 25.0%
! TCATCAATGAAAATTACAGA+TGG - chr7_4:42410381-42410400 None:intergenic 25.0%
!! ATCTGTAATTTTCATTGATG+AGG + chr7_4:42410380-42410399 Msa1154780:CDS 25.0%
!!! TTTTTGTTTAATGCTTGGTT+TGG + chr7_4:42410540-42410559 Msa1154780:intron 25.0%
! TAAGAACGTAGATGTAAAAA+TGG + chr7_4:42410598-42410617 Msa1154780:intron 25.0%
! AAGAACGTAGATGTAAAAAT+GGG + chr7_4:42410599-42410618 Msa1154780:intron 25.0%
!! ATCTCTTTTGATAAACTTCT+TGG + chr7_4:42410632-42410651 Msa1154780:intron 25.0%
!! TCTCTTTTGATAAACTTCTT+GGG + chr7_4:42410633-42410652 Msa1154780:intron 25.0%
!!! AATCTACCTTTTTTTTTTGG+TGG - chr7_4:42410697-42410716 None:intergenic 25.0%
! TGTGGAAATGATTAAAAATC+TGG - chr7_4:42410812-42410831 None:intergenic 25.0%
! TAGTGCTTGTCAAATTATAT+TGG - chr7_4:42410838-42410857 None:intergenic 25.0%
!! TTGATAGTATAATGTCAACA+AGG + chr7_4:42411038-42411057 Msa1154780:CDS 25.0%
!! TGCTCTTGTTAATCTATTTT+GGG + chr7_4:42411245-42411264 Msa1154780:intron 25.0%
! ACATAAAGTCATTTGTCAAA+GGG - chr7_4:42411301-42411320 None:intergenic 25.0%
!! TATAATTATTAGATGGGCTT+TGG + chr7_4:42411450-42411469 Msa1154780:intron 25.0%
!! ATAATTATTAGATGGGCTTT+GGG + chr7_4:42411451-42411470 Msa1154780:intron 25.0%
! TTTCATCCATCAATAAATAG+AGG - chr7_4:42411645-42411664 None:intergenic 25.0%
!! TCATACTTTTAATCCAGTAA+AGG - chr7_4:42411904-42411923 None:intergenic 25.0%
! AAATAAGAAGAGAGTTAGTA+AGG - chr7_4:42412095-42412114 None:intergenic 25.0%
!! CTAACATTTTCATTTGGTAA+AGG - chr7_4:42412148-42412167 None:intergenic 25.0%
! CTTTACCAAATGAAAATGTT+AGG + chr7_4:42412146-42412165 Msa1154780:CDS 25.0%
!! AGTTTCCTAACATTTTCATT+TGG - chr7_4:42412154-42412173 None:intergenic 25.0%
!! TATAAAAGTTTAGTATCGAG+GGG - chr7_4:42412242-42412261 None:intergenic 25.0%
! CATATAAAAGTTTAGTATCG+AGG - chr7_4:42412244-42412263 None:intergenic 25.0%
!! TTTTATATGCATATTCTTGG+AGG + chr7_4:42412255-42412274 Msa1154780:intron 25.0%
! CATGCAAAAAAATTACCAAT+TGG + chr7_4:42412293-42412312 Msa1154780:intron 25.0%
! ACAAATTATAAACTCCCAAT+TGG - chr7_4:42412311-42412330 None:intergenic 25.0%
!!! ACTTACGATTTTTTTGTTAC+AGG + chr7_4:42412434-42412453 Msa1154780:intron 25.0%
! TCAAAATCTATACTTACCTT+CGG - chr7_4:42412489-42412508 None:intergenic 25.0%
! TAAAACAAAGAAGAGAGAAA+AGG - chr7_4:42412553-42412572 None:intergenic 25.0%
!!! GTTTTATTGTGTCCAAAATT+TGG + chr7_4:42412567-42412586 Msa1154780:intron 25.0%
!!! AAAATCTTCCTTTGTTGTTA+AGG + chr7_4:42412792-42412811 Msa1154780:intron 25.0%
!! ATTTAAAACAAAGCCTTTCA+AGG - chr7_4:42413118-42413137 None:intergenic 25.0%
! CACGTGTATGTATAATATAA+TGG - chr7_4:42413179-42413198 None:intergenic 25.0%
AAGAAATCGATAAAGCTGTT+AGG + chr7_4:42407931-42407950 Msa1154780:CDS 30.0%
AGAAATCGATAAAGCTGTTA+GGG + chr7_4:42407932-42407951 Msa1154780:CDS 30.0%
GGTTTCTGCTATATTAATGA+TGG + chr7_4:42408065-42408084 Msa1154780:intron 30.0%
!! GCAAAAGCATTAATCTTGTT+AGG + chr7_4:42408236-42408255 Msa1154780:intron 30.0%
TCTTAGAGTTGTTCTTAGTT+TGG + chr7_4:42408314-42408333 Msa1154780:intron 30.0%
! AGCTTTTGTAAAAACCACTA+TGG - chr7_4:42408409-42408428 None:intergenic 30.0%
! GGTTTTTACAAAAGCTATAC+TGG + chr7_4:42408413-42408432 Msa1154780:intron 30.0%
TCGATAAAATCTCATGATCA+TGG + chr7_4:42408556-42408575 Msa1154780:intron 30.0%
ATTACTGTCAATTGAAGACT+TGG + chr7_4:42408642-42408661 Msa1154780:intron 30.0%
AGCTTCTCAATAAGAACTTA+TGG + chr7_4:42408680-42408699 Msa1154780:intron 30.0%
!!! AGAGAGATTTTAACTTGTAC+AGG - chr7_4:42408759-42408778 None:intergenic 30.0%
ATGATTAACTCACTGAATTC+GGG - chr7_4:42409006-42409025 None:intergenic 30.0%
TCAAAAGATATCAAAATGGC+AGG + chr7_4:42409203-42409222 Msa1154780:CDS 30.0%
CAAAAGATATCAAAATGGCA+GGG + chr7_4:42409204-42409223 Msa1154780:CDS 30.0%
AGTCAAAACGGAATTCAAAA+AGG - chr7_4:42409297-42409316 None:intergenic 30.0%
!!! GTTTTTTCTTTTCCTCGTTT+TGG + chr7_4:42409436-42409455 Msa1154780:intron 30.0%
TCAGTGCTTCTTAAAACATA+TGG + chr7_4:42409470-42409489 Msa1154780:intron 30.0%
TACGTTTCACTGAACATTAT+TGG + chr7_4:42409525-42409544 Msa1154780:intron 30.0%
ACGTTTCACTGAACATTATT+GGG + chr7_4:42409526-42409545 Msa1154780:intron 30.0%
GATTCTTATTATCGAAATCC+AGG + chr7_4:42409879-42409898 Msa1154780:intron 30.0%
! CTGATGAACCTTTTCATTTT+AGG + chr7_4:42410079-42410098 Msa1154780:intron 30.0%
GAAGCAAACCTAAAATGAAA+AGG - chr7_4:42410090-42410109 None:intergenic 30.0%
!!! ATTTTAGGTTTGCTTCTCTT+TGG + chr7_4:42410094-42410113 Msa1154780:intron 30.0%
AACTCAACACAAACAAGTTA+GGG - chr7_4:42410240-42410259 None:intergenic 30.0%
AAACTCAACACAAACAAGTT+AGG - chr7_4:42410241-42410260 None:intergenic 30.0%
TCTCTCTCATCTATATAGAA+AGG + chr7_4:42410405-42410424 Msa1154780:intron 30.0%
GTGCAACTCTAATTGATTAT+TGG + chr7_4:42410564-42410583 Msa1154780:intron 30.0%
AGAACGTAGATGTAAAAATG+GGG + chr7_4:42410600-42410619 Msa1154780:intron 30.0%
!! GTCAAATTATATTGGTCTTG+TGG - chr7_4:42410830-42410849 None:intergenic 30.0%
TATCGTAAGTGACTAGATTT+AGG - chr7_4:42410872-42410891 None:intergenic 30.0%
AATTCCTTATCCAGTTTGAT+GGG + chr7_4:42411101-42411120 Msa1154780:CDS 30.0%
ATTACAATCACAATGTCATC+AGG - chr7_4:42411139-42411158 None:intergenic 30.0%
GATGACATTGTGATTGTAAT+TGG + chr7_4:42411139-42411158 Msa1154780:CDS 30.0%
TTCTCTATCTGTAATGAACA+TGG + chr7_4:42411187-42411206 Msa1154780:intron 30.0%
! GTGCTCTTGTTAATCTATTT+TGG + chr7_4:42411244-42411263 Msa1154780:intron 30.0%
CATAAAGTCATTTGTCAAAG+GGG - chr7_4:42411300-42411319 None:intergenic 30.0%
CACATAAAGTCATTTGTCAA+AGG - chr7_4:42411302-42411321 None:intergenic 30.0%
CTTTGACAAATGACTTTATG+TGG + chr7_4:42411300-42411319 Msa1154780:intron 30.0%
TGTGGTTAAAATTCTCTTCT+AGG + chr7_4:42411318-42411337 Msa1154780:intron 30.0%
GTGGTTAAAATTCTCTTCTA+GGG + chr7_4:42411319-42411338 Msa1154780:intron 30.0%
AAGATAGGAGTAAACTTTAG+AGG + chr7_4:42411502-42411521 Msa1154780:intron 30.0%
TCATTCTGTAACGATGTTAT+AGG - chr7_4:42411535-42411554 None:intergenic 30.0%
TTACAATGGAAACCATATGT+GGG - chr7_4:42411602-42411621 None:intergenic 30.0%
ATTACAATGGAAACCATATG+TGG - chr7_4:42411603-42411622 None:intergenic 30.0%
ATATGGCCTCTATTTATTGA+TGG + chr7_4:42411636-42411655 Msa1154780:intron 30.0%
ATGGATGAAAAACTAAACTG+TGG + chr7_4:42411655-42411674 Msa1154780:intron 30.0%
ATTTCTTCATTGTCCTTTAC+TGG + chr7_4:42411888-42411907 Msa1154780:intron 30.0%
!!! CTTCTTATTTTTACTGTGCT+AGG + chr7_4:42412105-42412124 Msa1154780:intron 30.0%
!!! TACACTTTTAACTTTCTACG+CGG + chr7_4:42412335-42412354 Msa1154780:intron 30.0%
!!! TTTTGTTTTGCATGGTTTAC+AGG + chr7_4:42412611-42412630 Msa1154780:intron 30.0%
GCGCAACAAAAAAATTAAAG+TGG - chr7_4:42412750-42412769 None:intergenic 30.0%
!!! TTTTGTTTTTACCAGGTAAG+AGG + chr7_4:42412826-42412845 Msa1154780:intron 30.0%
TTTCAAGGCAATATGATTTC+AGG - chr7_4:42413103-42413122 None:intergenic 30.0%
TGAAATCATATTGCCTTGAA+AGG + chr7_4:42413102-42413121 Msa1154780:three_prime_UTR 30.0%
!!! TTGTTTTAAATTTAGGGACC+TGG + chr7_4:42413127-42413146 Msa1154780:three_prime_UTR 30.0%
!!! TGATCGATGAGTTTTTTGCA+GGG + chr7_4:42407744-42407763 Msa1154780:exon 35.0%
AGGAGAGAAAACAGAGTTAA+AGG - chr7_4:42407781-42407800 None:intergenic 35.0%
TGAGAAGAAGAAGAAGATTG+AGG - chr7_4:42407801-42407820 None:intergenic 35.0%
!! CATTGAAGAAGCACTGAAAT+TGG - chr7_4:42407826-42407845 None:intergenic 35.0%
CAATTTCAGTGCTTCTTCAA+TGG + chr7_4:42407824-42407843 Msa1154780:CDS 35.0%
TTAGTTGAAGGGGAGAAAAA+TGG + chr7_4:42408170-42408189 Msa1154780:intron 35.0%
AAGGGGAGAAAAATGGTATA+TGG + chr7_4:42408177-42408196 Msa1154780:intron 35.0%
AGGGGAGAAAAATGGTATAT+GGG + chr7_4:42408178-42408197 Msa1154780:intron 35.0%
! TATACTGGTTGTCCTTAGTT+TGG + chr7_4:42408428-42408447 Msa1154780:intron 35.0%
TTGTCGTGTTAGAGTATGTT+TGG + chr7_4:42408465-42408484 Msa1154780:intron 35.0%
! AGCTTTTGTCAAAACCACTA+TGG - chr7_4:42408523-42408542 None:intergenic 35.0%
AGATGCAGCAAAACAAGAAT+GGG - chr7_4:42408964-42408983 None:intergenic 35.0%
AAGATGCAGCAAAACAAGAA+TGG - chr7_4:42408965-42408984 None:intergenic 35.0%
CCTTTGTCATCAAGTTACTA+AGG - chr7_4:42409091-42409110 None:intergenic 35.0%
! CCTTAGTAACTTGATGACAA+AGG + chr7_4:42409088-42409107 Msa1154780:intron 35.0%
AAGAGGAATAGGAACAAATG+AGG - chr7_4:42409350-42409369 None:intergenic 35.0%
TGGAATGGAAAAAGAGGAAT+AGG - chr7_4:42409361-42409380 None:intergenic 35.0%
! TATTCCTCTTTTTCCATTCC+AGG + chr7_4:42409360-42409379 Msa1154780:intron 35.0%
TCTCTGTAAACTGTAAGTAC+AGG + chr7_4:42409413-42409432 Msa1154780:intron 35.0%
CTCTGTAAACTGTAAGTACA+GGG + chr7_4:42409414-42409433 Msa1154780:intron 35.0%
! ATTTTGTTGAAGCCAAAACG+AGG - chr7_4:42409451-42409470 None:intergenic 35.0%
! AGGTGCTCTACAAACATTTT+TGG - chr7_4:42409595-42409614 None:intergenic 35.0%
GAATCCTCAAAGAAAAGATG+AGG + chr7_4:42409682-42409701 Msa1154780:CDS 35.0%
! TTCACCTCATCTTTTCTTTG+AGG - chr7_4:42409689-42409708 None:intergenic 35.0%
! TTTTCACCAGATGTTTGACT+AGG - chr7_4:42409731-42409750 None:intergenic 35.0%
AGAAGGACTTCTATCTACAA+TGG - chr7_4:42409789-42409808 None:intergenic 35.0%
TCTTATTATCGAAATCCAGG+TGG + chr7_4:42409882-42409901 Msa1154780:intron 35.0%
! AAAGGCAAAGCAAGCTTTAA+TGG + chr7_4:42409911-42409930 Msa1154780:CDS 35.0%
! AAAGCAAGCTTTAATGGAGA+TGG + chr7_4:42409917-42409936 Msa1154780:CDS 35.0%
AACAAGTCTCTTCTCTTTGT+TGG - chr7_4:42409951-42409970 None:intergenic 35.0%
TTACATAACCCAAAGAGACA+AGG - chr7_4:42410014-42410033 None:intergenic 35.0%
! AGACTTAAGAAGTGTAACCA+TGG + chr7_4:42410273-42410292 Msa1154780:intron 35.0%
TAGTGAGTACAAGTTAACCA+TGG - chr7_4:42410293-42410312 None:intergenic 35.0%
ACTTGTACTCACTACTCAAT+AGG + chr7_4:42410299-42410318 Msa1154780:intron 35.0%
AAATTTATAGCAGGAGTAGG+GGG - chr7_4:42410438-42410457 None:intergenic 35.0%
CAAATTTATAGCAGGAGTAG+GGG - chr7_4:42410439-42410458 None:intergenic 35.0%
CCAAATTTATAGCAGGAGTA+GGG - chr7_4:42410440-42410459 None:intergenic 35.0%
CTTGTTGCCAAATTTATAGC+AGG - chr7_4:42410447-42410466 None:intergenic 35.0%
ACTGCACCACCAAAAAAAAA+AGG + chr7_4:42410688-42410707 Msa1154780:intron 35.0%
AAGGACGACAAATGAAAATG+AGG + chr7_4:42411057-42411076 Msa1154780:CDS 35.0%
!! TTCAGATTTTAATCGTCTGC+TGG - chr7_4:42411083-42411102 None:intergenic 35.0%
GAATTCCTTATCCAGTTTGA+TGG + chr7_4:42411100-42411119 Msa1154780:CDS 35.0%
ATTCCTTATCCAGTTTGATG+GGG + chr7_4:42411102-42411121 Msa1154780:CDS 35.0%
AATCACAATGTCATCAGGAT+TGG - chr7_4:42411134-42411153 None:intergenic 35.0%
!! ATTAACAAGAGCACTGTTCA+TGG - chr7_4:42411238-42411257 None:intergenic 35.0%
CTGGAATTCGAAAAACTCAT+GGG + chr7_4:42411346-42411365 Msa1154780:intron 35.0%
TAAATAGAGGCCATATTCTC+AGG - chr7_4:42411632-42411651 None:intergenic 35.0%
AACTGTGGCTATTGTAAATC+TGG + chr7_4:42411670-42411689 Msa1154780:intron 35.0%
TTCCTTTCCCTTCTGAATAT+AGG + chr7_4:42411810-42411829 Msa1154780:intron 35.0%
TTCTCCACTTAAAGTCACAT+CGG - chr7_4:42411950-42411969 None:intergenic 35.0%
TCTGCTAAAACACAAACTCA+AGG + chr7_4:42412174-42412193 Msa1154780:CDS 35.0%
CTGCTAAAACACAAACTCAA+GGG + chr7_4:42412175-42412194 Msa1154780:CDS 35.0%
!! GATTTTGAGTCACGATGAAA+AGG + chr7_4:42412501-42412520 Msa1154780:intron 35.0%
!!! CATATTTGGTGCCCAAATTT+TGG - chr7_4:42412582-42412601 None:intergenic 35.0%
TGAAATGTAGAGCAAGACAA+GGG + chr7_4:42413024-42413043 Msa1154780:three_prime_UTR 35.0%
!!! GTGATCGATGAGTTTTTTGC+AGG + chr7_4:42407743-42407762 Msa1154780:exon 40.0%
ACCTTCTTCTCCTTCTTCTT+CGG + chr7_4:42407854-42407873 Msa1154780:CDS 40.0%
! TCGTTTGAAACCGAAGAAGA+AGG - chr7_4:42407867-42407886 None:intergenic 40.0%
ATGACGCTATTCTTCACTAC+AGG + chr7_4:42407976-42407995 Msa1154780:CDS 40.0%
TTCACTACAGGAATGCTCAT+AGG + chr7_4:42407988-42408007 Msa1154780:CDS 40.0%
ATATAGCAGAAACCTCACCT+GGG - chr7_4:42408059-42408078 None:intergenic 40.0%
AATATAGCAGAAACCTCACC+TGG - chr7_4:42408060-42408079 None:intergenic 40.0%
GGGGAGAAAAATGGTATATG+GGG + chr7_4:42408179-42408198 Msa1154780:intron 40.0%
!! TTCTTAGTTTGGTGCTAGCT+AGG + chr7_4:42408325-42408344 Msa1154780:intron 40.0%
GATGCAGCAAAACAAGAATG+GGG - chr7_4:42408963-42408982 None:intergenic 40.0%
TAATCATAAGGGACAGCCTT+TGG + chr7_4:42409019-42409038 Msa1154780:intron 40.0%
CACTGTCACACACAAGATTA+TGG - chr7_4:42409158-42409177 None:intergenic 40.0%
! ACAAGTTTCTGAGAGATTGC+AGG + chr7_4:42409227-42409246 Msa1154780:CDS 40.0%
GAGAACATAGCATACCTGAT+TGG - chr7_4:42409397-42409416 None:intergenic 40.0%
CACTGAACATTATTGGGTAC+TGG + chr7_4:42409532-42409551 Msa1154780:intron 40.0%
CAGATGTTTGACTAGGTTTC+GGG - chr7_4:42409724-42409743 None:intergenic 40.0%
CCAGATGTTTGACTAGGTTT+CGG - chr7_4:42409725-42409744 None:intergenic 40.0%
ATAGAAGTCCTTCTGTTCGA+TGG + chr7_4:42409795-42409814 Msa1154780:CDS 40.0%
TAGAAGTCCTTCTGTTCGAT+GGG + chr7_4:42409796-42409815 Msa1154780:CDS 40.0%
! AAGAGAAGAGACTTGTTCAC+TGG + chr7_4:42409954-42409973 Msa1154780:CDS 40.0%
AGCTTCCTTGACGTCAAAAT+GGG + chr7_4:42410195-42410214 Msa1154780:CDS 40.0%
!! AAGTACCCATTTTGACGTCA+AGG - chr7_4:42410203-42410222 None:intergenic 40.0%
TGTACTCACTACTCAATAGG+TGG + chr7_4:42410302-42410321 Msa1154780:intron 40.0%
GTACTCACTACTCAATAGGT+GGG + chr7_4:42410303-42410322 Msa1154780:intron 40.0%
GTGAAGCTGAAAAGCTTGTA+CGG + chr7_4:42410325-42410344 Msa1154780:CDS 40.0%
CCCTACTCCTGCTATAAATT+TGG + chr7_4:42410437-42410456 Msa1154780:intron 40.0%
GCCAAATTTATAGCAGGAGT+AGG - chr7_4:42410441-42410460 None:intergenic 40.0%
ACGTAGATGTAAAAATGGGG+TGG + chr7_4:42410603-42410622 Msa1154780:intron 40.0%
ATGTAAAAATGGGGTGGCTA+AGG + chr7_4:42410609-42410628 Msa1154780:intron 40.0%
CTGACATTCAAAAAAGACGC+TGG - chr7_4:42410761-42410780 None:intergenic 40.0%
! AATTCTCTTCTAGGGAATGC+TGG + chr7_4:42411327-42411346 Msa1154780:intron 40.0%
GCTGGAATTCGAAAAACTCA+TGG + chr7_4:42411345-42411364 Msa1154780:intron 40.0%
TCAGTTGTATCTCCCACATA+TGG + chr7_4:42411587-42411606 Msa1154780:intron 40.0%
TAATCTGCCTCCTGAGAATA+TGG + chr7_4:42411619-42411638 Msa1154780:intron 40.0%
CACCTATATTCAGAAGGGAA+AGG - chr7_4:42411815-42411834 None:intergenic 40.0%
GGTTGCACCTATATTCAGAA+GGG - chr7_4:42411820-42411839 None:intergenic 40.0%
TGGTTGCACCTATATTCAGA+AGG - chr7_4:42411821-42411840 None:intergenic 40.0%
AACCAATAAGCCACAGGAAT+TGG + chr7_4:42411836-42411855 Msa1154780:CDS 40.0%
ATCCAATTCCTGTGGCTTAT+TGG - chr7_4:42411841-42411860 None:intergenic 40.0%
AATTGGATGATGCCGTTCTT+AGG + chr7_4:42411853-42411872 Msa1154780:CDS 40.0%
ACATCGGCAATATGACATTC+TGG - chr7_4:42411934-42411953 None:intergenic 40.0%
ATTGCCGATGTGACTTTAAG+TGG + chr7_4:42411943-42411962 Msa1154780:intron 40.0%
ATGCTGGTAAAAGAAACCGA+AGG + chr7_4:42412470-42412489 Msa1154780:CDS 40.0%
AATGATGCCAATTAGAGAGC+TGG + chr7_4:42412676-42412695 Msa1154780:CDS 40.0%
ATGATGCCAATTAGAGAGCT+GGG + chr7_4:42412677-42412696 Msa1154780:CDS 40.0%
TTAGAACCCAGCTCTCTAAT+TGG - chr7_4:42412686-42412705 None:intergenic 40.0%
TTCTAACATTCTCACCGTCA+AGG + chr7_4:42412700-42412719 Msa1154780:intron 40.0%
TGAGGACTTCAAGAAAGCAA+TGG + chr7_4:42412858-42412877 Msa1154780:CDS 40.0%
CTGAAATGTAGAGCAAGACA+AGG + chr7_4:42413023-42413042 Msa1154780:three_prime_UTR 40.0%
CAATACAGCCTTGAATGGAA+TGG + chr7_4:42413150-42413169 Msa1154780:three_prime_UTR 40.0%
AATGGCAACCATTCCATTCA+AGG - chr7_4:42413161-42413180 None:intergenic 40.0%
ACCGAAGAAGAAGGAGAAGA+AGG - chr7_4:42407858-42407877 None:intergenic 45.0%
AAGCTGTTAGGGCTGAAGAA+TGG + chr7_4:42407943-42407962 Msa1154780:CDS 45.0%
AGCTGTTAGGGCTGAAGAAT+GGG + chr7_4:42407944-42407963 Msa1154780:CDS 45.0%
! GAGTAGAACTAGCTTCGAGA+AGG - chr7_4:42408016-42408035 None:intergenic 45.0%
GGAGTGATGAATGAAGGAAC+AGG - chr7_4:42408038-42408057 None:intergenic 45.0%
TTCCTTCATTCATCACTCCC+AGG + chr7_4:42408039-42408058 Msa1154780:CDS 45.0%
GAAATCACATTGCGCCATAG+TGG + chr7_4:42408392-42408411 Msa1154780:intron 45.0%
!! TCCTTAGTTTGGTGCTAGCT+AGG + chr7_4:42408439-42408458 Msa1154780:intron 45.0%
TCCTAGCTAGCACCAAACTA+AGG - chr7_4:42408329-42408348 None:intergenic 45.0%
GAATTCACAGTGTGCCATAG+TGG + chr7_4:42408506-42408525 Msa1154780:intron 45.0%
CACTGAATTCGGGTGCAATT+TGG - chr7_4:42408996-42409015 None:intergenic 45.0%
CTAAGCTGTCACATAGCCAA+AGG - chr7_4:42409038-42409057 None:intergenic 45.0%
GCTACCTGGAATGGAAAAAG+AGG - chr7_4:42409367-42409386 None:intergenic 45.0%
TGATTGGCAAATGAGCTACC+TGG - chr7_4:42409381-42409400 None:intergenic 45.0%
AGGTAGCTCATTTGCCAATC+AGG + chr7_4:42409380-42409399 Msa1154780:intron 45.0%
CCGAAACCTAGTCAAACATC+TGG + chr7_4:42409722-42409741 Msa1154780:CDS 45.0%
!! AAGCTTGCTTTGCCTTTTCC+AGG - chr7_4:42409908-42409927 None:intergenic 45.0%
CCTTGGAACCTTGTCTCTTT+GGG + chr7_4:42410003-42410022 Msa1154780:intron 45.0%
! ATGGTCTTACCATTACCAGG+CGG - chr7_4:42410121-42410140 None:intergenic 45.0%
! AGCATGGTCTTACCATTACC+AGG - chr7_4:42410124-42410143 None:intergenic 45.0%
!! TGATTCTGAAGCCACTGCTT+TGG - chr7_4:42410149-42410168 None:intergenic 45.0%
CAGCTTCCTTGACGTCAAAA+TGG + chr7_4:42410194-42410213 Msa1154780:CDS 45.0%
GCTTGTACGGACACTATTCT+TGG + chr7_4:42410338-42410357 Msa1154780:CDS 45.0%
TCACCCCATCAAACTGGATA+AGG - chr7_4:42411108-42411127 None:intergenic 45.0%
GGGATTGTTCCAGAAGAACT+CGG + chr7_4:42411471-42411490 Msa1154780:intron 45.0%
!! AACTCGGCTGCTCTAAAGAT+AGG + chr7_4:42411487-42411506 Msa1154780:intron 45.0%
TCTCAGGAGGCAGATTACAA+TGG - chr7_4:42411616-42411635 None:intergenic 45.0%
ATAGAGGCCATATTCTCAGG+AGG - chr7_4:42411629-42411648 None:intergenic 45.0%
TCTCACCAGTCTCCTAAGAA+CGG - chr7_4:42411868-42411887 None:intergenic 45.0%
! AAAAGAGCACGTCGCTTACT+AGG - chr7_4:42412217-42412236 None:intergenic 45.0%
! ATGCATATTCTTGGAGGCAC+CGG + chr7_4:42412261-42412280 Msa1154780:intron 45.0%
! TTTTTGCATGTTCCGCCTTC+CGG - chr7_4:42412283-42412302 None:intergenic 45.0%
AGGTAGAGATCTAGAGATGC+TGG + chr7_4:42412454-42412473 Msa1154780:intron 45.0%
GCATGGTTTACAGGATACTC+TGG + chr7_4:42412620-42412639 Msa1154780:intron 45.0%
CATTGCAGCTTCTTCACACA+AGG - chr7_4:42412660-42412679 None:intergenic 45.0%
TTTACCAGGTAAGAGGACTG+AGG + chr7_4:42412833-42412852 Msa1154780:intron 45.0%
AATGGGAAGAGCTTGAGAGA+TGG + chr7_4:42412911-42412930 Msa1154780:CDS 45.0%
AGAGCTTGAGAGATGGAATG+AGG + chr7_4:42412918-42412937 Msa1154780:CDS 45.0%
GAGAGATGGAATGAGGAGTT+TGG + chr7_4:42412925-42412944 Msa1154780:CDS 45.0%
!! GACAAGGGCACCAAAGTTTA+TGG + chr7_4:42413039-42413058 Msa1154780:three_prime_UTR 45.0%
!!! TTTTATTTTATTTTTAAGAA+TGG - chr7_4:42407583-42407602 None:intergenic 5.0%
GCTGTTAGGGCTGAAGAATG+GGG + chr7_4:42407945-42407964 Msa1154780:CDS 50.0%
TAGGGCTGAAGAATGGGGTT+TGG + chr7_4:42407950-42407969 Msa1154780:CDS 50.0%
CACCTGGGAGTGATGAATGA+AGG - chr7_4:42408044-42408063 None:intergenic 50.0%
TCATTCATCACTCCCAGGTG+AGG + chr7_4:42408044-42408063 Msa1154780:intron 50.0%
GGCAAATGAGCTACCTGGAA+TGG - chr7_4:42409376-42409395 None:intergenic 50.0%
AGCAGTTTGTGCACGGTTTG+AGG - chr7_4:42409615-42409634 None:intergenic 50.0%
GAACTGCAGCAGTTTGTGCA+CGG - chr7_4:42409622-42409641 None:intergenic 50.0%
ACATCGTCCCATCGAACAGA+AGG - chr7_4:42409806-42409825 None:intergenic 50.0%
TCTGTTCGATGGGACGATGT+TGG + chr7_4:42409806-42409825 Msa1154780:CDS 50.0%
TTATCGAAATCCAGGTGGCC+TGG + chr7_4:42409887-42409906 Msa1154780:intron 50.0%
AAATCCAGGTGGCCTGGAAA+AGG + chr7_4:42409893-42409912 Msa1154780:intron 50.0%
!! ACCAGCTAGAGGTATTGCCT+TGG + chr7_4:42409986-42410005 Msa1154780:intron 50.0%
TCCAAGGCAATACCTCTAGC+TGG - chr7_4:42409990-42410009 None:intergenic 50.0%
GCCTTGGAACCTTGTCTCTT+TGG + chr7_4:42410002-42410021 Msa1154780:intron 50.0%
CCCAAAGAGACAAGGTTCCA+AGG - chr7_4:42410006-42410025 None:intergenic 50.0%
TTATAGCAGGAGTAGGGGGT+GGG - chr7_4:42410434-42410453 None:intergenic 50.0%
TTTATAGCAGGAGTAGGGGG+TGG - chr7_4:42410435-42410454 None:intergenic 50.0%
TGGATGTCACCCCATCAAAC+TGG - chr7_4:42411114-42411133 None:intergenic 50.0%
TTAGAGCAGCCGAGTTCTTC+TGG - chr7_4:42411483-42411502 None:intergenic 50.0%
AGGTGCAACCAATAAGCCAC+AGG + chr7_4:42411830-42411849 Msa1154780:intron 50.0%
ACGGCATCATCCAATTCCTG+TGG - chr7_4:42411849-42411868 None:intergenic 50.0%
TGATGCCGTTCTTAGGAGAC+TGG + chr7_4:42411860-42411879 Msa1154780:CDS 50.0%
AGCACGTCGCTTACTAGGTA+AGG - chr7_4:42412212-42412231 None:intergenic 50.0%
!! ATATTCTTGGAGGCACCGGA+AGG + chr7_4:42412265-42412284 Msa1154780:intron 50.0%
TCTCACCGTCAAGGCAAATC+AGG + chr7_4:42412709-42412728 Msa1154780:intron 50.0%
! GCATGCCTGATTTGCCTTGA+CGG - chr7_4:42412717-42412736 None:intergenic 50.0%
CATACCTCAGTCCTCTTACC+TGG - chr7_4:42412840-42412859 None:intergenic 50.0%
GGTAAGAGGACTGAGGTATG+AGG + chr7_4:42412840-42412859 Msa1154780:intron 50.0%
CCATTCAAGGCTGTATTGCC+AGG - chr7_4:42413148-42413167 None:intergenic 50.0%
CCTGGCAATACAGCCTTGAA+TGG + chr7_4:42413145-42413164 Msa1154780:three_prime_UTR 50.0%
CGCGTCGCGTATAAGCTGAA+AGG + chr7_4:42407888-42407907 Msa1154780:CDS 55.0%
! TTTGCCTTTTCCAGGCCACC+TGG - chr7_4:42409900-42409919 None:intergenic 55.0%
GGTCTTCGAAGACCAGCTAG+AGG + chr7_4:42409975-42409994 Msa1154780:CDS 55.0%
TTGCTTCTCTTTGGTCCGCC+TGG + chr7_4:42410103-42410122 Msa1154780:CDS 55.0%
CTCTTTGGTCCGCCTGGTAA+TGG + chr7_4:42410109-42410128 Msa1154780:CDS 55.0%
GACCATGCTTGCCAAAGCAG+TGG + chr7_4:42410135-42410154 Msa1154780:CDS 55.0%
AGCCACTGCTTTGGCAAGCA+TGG - chr7_4:42410140-42410159 None:intergenic 55.0%
TATAGCAGGAGTAGGGGGTG+GGG - chr7_4:42410433-42410452 None:intergenic 55.0%
CAGGCTCTCAGTAGACGAGC+AGG + chr7_4:42409246-42409265 Msa1154780:CDS 60.0%
ATAGCAGGAGTAGGGGGTGG+GGG - chr7_4:42410432-42410451 None:intergenic 60.0%
!! TTCTTGGAGGCACCGGAAGG+CGG + chr7_4:42412268-42412287 Msa1154780:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 42407535 42413229 42407535 ID=Msa1154780;Name=Msa1154780
chr7_4 mRNA 42407535 42413229 42407535 ID=Msa1154780-mRNA-1;Parent=Msa1154780;Name=Msa1154780-mRNA-1;_AED=0.09;_eAED=0.09;_QI=215|0.91|0.92|1|0.91|0.92|13|272|478
chr7_4 exon 42407535 42408060 42407535 ID=Msa1154780-mRNA-1:exon:10430;Parent=Msa1154780-mRNA-1
chr7_4 exon 42409176 42409267 42409176 ID=Msa1154780-mRNA-1:exon:10431;Parent=Msa1154780-mRNA-1
chr7_4 exon 42409382 42409401 42409382 ID=Msa1154780-mRNA-1:exon:10432;Parent=Msa1154780-mRNA-1
chr7_4 exon 42409608 42409827 42409608 ID=Msa1154780-mRNA-1:exon:10433;Parent=Msa1154780-mRNA-1
chr7_4 exon 42409901 42409996 42409901 ID=Msa1154780-mRNA-1:exon:10434;Parent=Msa1154780-mRNA-1
chr7_4 exon 42410101 42410216 42410101 ID=Msa1154780-mRNA-1:exon:10435;Parent=Msa1154780-mRNA-1
chr7_4 exon 42410321 42410401 42410321 ID=Msa1154780-mRNA-1:exon:10436;Parent=Msa1154780-mRNA-1
chr7_4 exon 42411037 42411160 42411037 ID=Msa1154780-mRNA-1:exon:10437;Parent=Msa1154780-mRNA-1
chr7_4 exon 42411832 42411881 42411832 ID=Msa1154780-mRNA-1:exon:10438;Parent=Msa1154780-mRNA-1
chr7_4 exon 42412127 42412217 42412127 ID=Msa1154780-mRNA-1:exon:10439;Parent=Msa1154780-mRNA-1
chr7_4 exon 42412456 42412491 42412456 ID=Msa1154780-mRNA-1:exon:10440;Parent=Msa1154780-mRNA-1
chr7_4 exon 42412633 42412715 42412633 ID=Msa1154780-mRNA-1:exon:10441;Parent=Msa1154780-mRNA-1
chr7_4 exon 42412841 42413229 42412841 ID=Msa1154780-mRNA-1:exon:10442;Parent=Msa1154780-mRNA-1
chr7_4 five_prime_UTR 42407535 42407749 42407535 ID=Msa1154780-mRNA-1:five_prime_utr;Parent=Msa1154780-mRNA-1
chr7_4 CDS 42407750 42408060 42407750 ID=Msa1154780-mRNA-1:cds;Parent=Msa1154780-mRNA-1
chr7_4 CDS 42409176 42409267 42409176 ID=Msa1154780-mRNA-1:cds;Parent=Msa1154780-mRNA-1
chr7_4 CDS 42409382 42409401 42409382 ID=Msa1154780-mRNA-1:cds;Parent=Msa1154780-mRNA-1
chr7_4 CDS 42409608 42409827 42409608 ID=Msa1154780-mRNA-1:cds;Parent=Msa1154780-mRNA-1
chr7_4 CDS 42409901 42409996 42409901 ID=Msa1154780-mRNA-1:cds;Parent=Msa1154780-mRNA-1
chr7_4 CDS 42410101 42410216 42410101 ID=Msa1154780-mRNA-1:cds;Parent=Msa1154780-mRNA-1
chr7_4 CDS 42410321 42410401 42410321 ID=Msa1154780-mRNA-1:cds;Parent=Msa1154780-mRNA-1
chr7_4 CDS 42411037 42411160 42411037 ID=Msa1154780-mRNA-1:cds;Parent=Msa1154780-mRNA-1
chr7_4 CDS 42411832 42411881 42411832 ID=Msa1154780-mRNA-1:cds;Parent=Msa1154780-mRNA-1
chr7_4 CDS 42412127 42412217 42412127 ID=Msa1154780-mRNA-1:cds;Parent=Msa1154780-mRNA-1
chr7_4 CDS 42412456 42412491 42412456 ID=Msa1154780-mRNA-1:cds;Parent=Msa1154780-mRNA-1
chr7_4 CDS 42412633 42412715 42412633 ID=Msa1154780-mRNA-1:cds;Parent=Msa1154780-mRNA-1
chr7_4 CDS 42412841 42412957 42412841 ID=Msa1154780-mRNA-1:cds;Parent=Msa1154780-mRNA-1
chr7_4 three_prime_UTR 42412958 42413229 42412958 ID=Msa1154780-mRNA-1:three_prime_utr;Parent=Msa1154780-mRNA-1
Gene Sequence

>Msa1154780

ATGAGTTTTTTGCAGGGAATCATTGATTCCTTTAACTCTGTTTTCTCTCCTCAATCTTCTTCTTCTTCTCAAACCAATTTCAGTGCTTCTTCAATGGAAGCTTCACCTTCTTCTCCTTCTTCTTCGGTTTCAAACGAACGCGTCGCGTATAAGCTGAAAGGCTACTACGATTTAGCAACACAAGAAATCGATAAAGCTGTTAGGGCTGAAGAATGGGGTTTGGTTGATGACGCTATTCTTCACTACAGGAATGCTCATAGGATCCTTCTCGAAGCTAGTTCTACTCCTGTTCCTTCATTCATCACTCCCAGTGAGAAACAGAAAGTACAATCATATCGTCAAAAGATATCAAAATGGCAGGGACAAGTTTCTGAGAGATTGCAGGCTCTCAGTAGACGAGCAGGTAGCTCATTTGCCAATCAGAGCACCTCAAACCGTGCACAAACTGCTGCAGTTCCAACTAAACTATCAAATACTACAAAAAAAGTGCTACAAAAGAATCCTCAAAGAAAAGATGAGGTGAATAAAGTTCAAAGCCCGAAACCTAGTCAAACATCTGGTGAAAATTATGATACGAAACTGGTTGAAATGATTAACACTGCCATTGTAGATAGAAGTCCTTCTGTTCGATGGGACGATGTTGGTGGCCTGGAAAAGGCAAAGCAAGCTTTAATGGAGATGGTTATTTTGCCAACAAAGAGAAGAGACTTGTTCACTGGTCTTCGAAGACCAGCTAGAGGTTTGCTTCTCTTTGGTCCGCCTGGTAATGGTAAGACCATGCTTGCCAAAGCAGTGGCTTCAGAATCAGAAGCAACATTTTTTAATGTCACGGCAGCTTCCTTGACGTCAAAATGGGTGGGTGAAGCTGAAAAGCTTGTACGGACACTATTCTTGGTAGCTGTATCGAGACAGCCATCTGTAATTTTCATTGATGAGATTGATAGTATAATGTCAACAAGGACGACAAATGAAAATGAGGCCAGCAGACGATTAAAATCTGAATTCCTTATCCAGTTTGATGGGGTGACATCCAATCCTGATGACATTGTGATTGTAATTGGTGCAACCAATAAGCCACAGGAATTGGATGATGCCGTTCTTAGGAGACTGGTTAAGAGAATATATGTACCTTTACCAAATGAAAATGTTAGGAAACTTCTGCTAAAACACAAACTCAAGGGTCAAGCGTTCTCCTTACCTAGTAGAGATCTAGAGATGCTGGTAAAAGAAACCGAAGGATACTCTGGAAGTGATCTGCAAGCCTTGTGTGAAGAAGCTGCAATGATGCCAATTAGAGAGCTGGGTTCTAACATTCTCACCGTAAGAGGACTGAGGTATGAGGACTTCAAGAAAGCAATGGCTGTGATCAGACCAAGTTTAAACAAAAGTAAATGGGAAGAGCTTGAGAGATGGAATGAGGAGTTTGGTTCAAATTGA
Protein sequence

>Msa1154780

MSFLQGIIDSFNSVFSPQSSSSSQTNFSASSMEASPSSPSSSVSNERVAYKLKGYYDLATQEIDKAVRAEEWGLVDDAILHYRNAHRILLEASSTPVPSFITPSEKQKVQSYRQKISKWQGQVSERLQALSRRAGSSFANQSTSNRAQTAAVPTKLSNTTKKVLQKNPQRKDEVNKVQSPKPSQTSGENYDTKLVEMINTAIVDRSPSVRWDDVGGLEKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVTAASLTSKWVGEAEKLVRTLFLVAVSRQPSVIFIDEIDSIMSTRTTNENEASRRLKSEFLIQFDGVTSNPDDIVIVIGATNKPQELDDAVLRRLVKRIYVPLPNENVRKLLLKHKLKGQAFSLPSRDLEMLVKETEGYSGSDLQALCEEAAMMPIRELGSNILTVRGLRYEDFKKAMAVIRPSLNKSKWEELERWNEEFGSN*