Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1088390 | XP_013446746.1 | 99.353 | 309 | 2 | 0 | 21 | 329 | 82 | 390 | 0.0 | 649 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1088390 | A0A072TV77 | 99.353 | 309 | 2 | 0 | 21 | 329 | 82 | 390 | 0.0 | 649 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003630 | Msa1088390 | 0.809469 | 1.863471e-50 | -8.615850e-47 |
| Msa0012710 | Msa1088390 | 0.805772 | 1.135983e-49 | -8.615850e-47 |
| Msa0017320 | Msa1088390 | 0.815321 | 9.813606e-52 | -8.615850e-47 |
| Msa0032470 | Msa1088390 | 0.837821 | 4.145530e-57 | -8.615850e-47 |
| Msa0033850 | Msa1088390 | 0.806524 | 7.889548e-50 | -8.615850e-47 |
| Msa0042550 | Msa1088390 | 0.801813 | 7.542115e-49 | -8.615850e-47 |
| Msa0043500 | Msa1088390 | 0.803937 | 2.746240e-49 | -8.615850e-47 |
| Msa0058310 | Msa1088390 | 0.840727 | 7.304356e-58 | -8.615850e-47 |
| Msa0061500 | Msa1088390 | 0.801715 | 7.901303e-49 | -8.615850e-47 |
| Msa0071250 | Msa1088390 | 0.812620 | 3.867833e-51 | -8.615850e-47 |
| Msa0081620 | Msa1088390 | 0.803630 | 3.181303e-49 | -8.615850e-47 |
| Msa0090550 | Msa1088390 | 0.804063 | 2.585881e-49 | -8.615850e-47 |
| Msa0104230 | Msa1088390 | 0.803764 | 2.983222e-49 | -8.615850e-47 |
| Msa0111080 | Msa1088390 | 0.823231 | 1.548364e-53 | -8.615850e-47 |
| Msa0117520 | Msa1088390 | 0.806080 | 9.787654e-50 | -8.615850e-47 |
| Msa0610250 | Msa1088390 | 0.865046 | 7.841110e-65 | -8.615850e-47 |
| Msa0618950 | Msa1088390 | 0.803991 | 2.675768e-49 | -8.615850e-47 |
| Msa0623990 | Msa1088390 | 0.834527 | 2.847189e-56 | -8.615850e-47 |
| Msa0624060 | Msa1088390 | 0.834472 | 2.939123e-56 | -8.615850e-47 |
| Msa0652690 | Msa1088390 | 0.803628 | 3.183223e-49 | -8.615850e-47 |
| Msa0654620 | Msa1088390 | 0.817303 | 3.537386e-52 | -8.615850e-47 |
| Msa0656960 | Msa1088390 | 0.807217 | 5.631009e-50 | -8.615850e-47 |
| Msa0657120 | Msa1088390 | 0.820203 | 7.763768e-53 | -8.615850e-47 |
| Msa0658680 | Msa1088390 | 0.902261 | 1.161596e-78 | -8.615850e-47 |
| Msa0659790 | Msa1088390 | 0.818116 | 2.318898e-52 | -8.615850e-47 |
| Msa0667790 | Msa1088390 | 0.802104 | 6.571281e-49 | -8.615850e-47 |
| Msa0676130 | Msa1088390 | 0.831692 | 1.445454e-55 | -8.615850e-47 |
| Msa0676180 | Msa1088390 | 0.826960 | 2.035951e-54 | -8.615850e-47 |
| Msa0679360 | Msa1088390 | 0.803568 | 3.276750e-49 | -8.615850e-47 |
| Msa0689250 | Msa1088390 | 0.803619 | 3.196696e-49 | -8.615850e-47 |
| Msa0689320 | Msa1088390 | 0.808847 | 2.532174e-50 | -8.615850e-47 |
| Msa0701100 | Msa1088390 | 0.826970 | 2.025298e-54 | -8.615850e-47 |
| Msa0703440 | Msa1088390 | 0.841105 | 5.813547e-58 | -8.615850e-47 |
| Msa0705390 | Msa1088390 | 0.808590 | 2.873604e-50 | -8.615850e-47 |
| Msa0705990 | Msa1088390 | 0.832606 | 8.590878e-56 | -8.615850e-47 |
| Msa0732600 | Msa1088390 | 0.812735 | 3.650285e-51 | -8.615850e-47 |
| Msa0741440 | Msa1088390 | 0.805710 | 1.170571e-49 | -8.615850e-47 |
| Msa0742150 | Msa1088390 | 0.802976 | 4.343866e-49 | -8.615850e-47 |
| Msa0746170 | Msa1088390 | 0.818482 | 1.915332e-52 | -8.615850e-47 |
| Msa0746210 | Msa1088390 | 0.818830 | 1.596919e-52 | -8.615850e-47 |
| Msa0750850 | Msa1088390 | 0.807575 | 4.727703e-50 | -8.615850e-47 |
| Msa0773590 | Msa1088390 | 0.808702 | 2.720355e-50 | -8.615850e-47 |
| Msa0779260 | Msa1088390 | 0.809761 | 1.612367e-50 | -8.615850e-47 |
| Msa0786750 | Msa1088390 | 0.800930 | 1.143993e-48 | -8.615850e-47 |
| Msa0811040 | Msa1088390 | 0.806496 | 7.997204e-50 | -8.615850e-47 |
| Msa0829220 | Msa1088390 | 0.821802 | 3.326975e-53 | -8.615850e-47 |
| Msa0138020 | Msa1088390 | 0.827753 | 1.314115e-54 | -8.615850e-47 |
| Msa0138640 | Msa1088390 | 0.834645 | 2.659614e-56 | -8.615850e-47 |
| Msa0142500 | Msa1088390 | 0.812324 | 4.490312e-51 | -8.615850e-47 |
| Msa0152560 | Msa1088390 | 0.821136 | 4.739886e-53 | -8.615850e-47 |
| Msa0154920 | Msa1088390 | 0.818209 | 2.208175e-52 | -8.615850e-47 |
| Msa0160960 | Msa1088390 | 0.805773 | 1.135545e-49 | -8.615850e-47 |
| Msa0175540 | Msa1088390 | 0.803841 | 2.875829e-49 | -8.615850e-47 |
| Msa0178510 | Msa1088390 | 0.810726 | 9.985645e-51 | -8.615850e-47 |
| Msa0186950 | Msa1088390 | 0.815847 | 7.495629e-52 | -8.615850e-47 |
| Msa0187490 | Msa1088390 | 0.842931 | 1.912166e-58 | -8.615850e-47 |
| Msa0189030 | Msa1088390 | 0.819232 | 1.293987e-52 | -8.615850e-47 |
| Msa0196670 | Msa1088390 | 0.802705 | 4.942176e-49 | -8.615850e-47 |
| Msa0197610 | Msa1088390 | 0.814864 | 1.240141e-51 | -8.615850e-47 |
| Msa0202930 | Msa1088390 | 0.825061 | 5.757153e-54 | -8.615850e-47 |
| Msa0207030 | Msa1088390 | 0.802073 | 6.670273e-49 | -8.615850e-47 |
| Msa0233370 | Msa1088390 | 0.801454 | 8.936782e-49 | -8.615850e-47 |
| Msa0237200 | Msa1088390 | 0.815262 | 1.011606e-51 | -8.615850e-47 |
| Msa0378970 | Msa1088390 | 0.816517 | 5.309473e-52 | -8.615850e-47 |
| Msa0387050 | Msa1088390 | 0.800854 | 1.185412e-48 | -8.615850e-47 |
| Msa0394470 | Msa1088390 | 0.802913 | 4.476734e-49 | -8.615850e-47 |
| Msa0397270 | Msa1088390 | 0.804401 | 2.199172e-49 | -8.615850e-47 |
| Msa0403490 | Msa1088390 | 0.805819 | 1.110659e-49 | -8.615850e-47 |
| Msa0403770 | Msa1088390 | 0.814548 | 1.456378e-51 | -8.615850e-47 |
| Msa0408300 | Msa1088390 | 0.805971 | 1.031620e-49 | -8.615850e-47 |
| Msa0432160 | Msa1088390 | 0.801261 | 9.786486e-49 | -8.615850e-47 |
| Msa0432500 | Msa1088390 | 0.805292 | 1.432458e-49 | -8.615850e-47 |
| Msa0474940 | Msa1088390 | 0.809251 | 2.075289e-50 | -8.615850e-47 |
| Msa0476680 | Msa1088390 | 0.801171 | 1.021189e-48 | -8.615850e-47 |
| Msa0480780 | Msa1088390 | 0.803285 | 3.749244e-49 | -8.615850e-47 |
| Msa0980020 | Msa1088390 | 0.805827 | 1.105918e-49 | -8.615850e-47 |
| Msa0985180 | Msa1088390 | 0.839577 | 1.457831e-57 | -8.615850e-47 |
| Msa0985220 | Msa1088390 | 0.825329 | 4.974571e-54 | -8.615850e-47 |
| Msa0992580 | Msa1088390 | 0.827450 | 1.553855e-54 | -8.615850e-47 |
| Msa0992600 | Msa1088390 | 0.821931 | 3.106176e-53 | -8.615850e-47 |
| Msa1011090 | Msa1088390 | 0.808960 | 2.395755e-50 | -8.615850e-47 |
| Msa1024680 | Msa1088390 | 0.823034 | 1.720961e-53 | -8.615850e-47 |
| Msa1029620 | Msa1088390 | 0.820447 | 6.825139e-53 | -8.615850e-47 |
| Msa1063420 | Msa1088390 | 0.832482 | 9.220933e-56 | -8.615850e-47 |
| Msa1071320 | Msa1088390 | 0.803024 | 4.246592e-49 | -8.615850e-47 |
| Msa1081790 | Msa1088390 | -0.813264 | 2.795322e-51 | -8.615850e-47 |
| Msa1088390 | Msa1096070 | 0.801556 | 8.518077e-49 | -8.615850e-47 |
| Msa1088390 | Msa1108710 | 0.802595 | 5.208331e-49 | -8.615850e-47 |
| Msa1088390 | Msa1126240 | 0.809944 | 1.473142e-50 | -8.615850e-47 |
| Msa1088390 | Msa1130400 | 0.803762 | 2.986827e-49 | -8.615850e-47 |
| Msa1088390 | Msa1130530 | 0.837658 | 4.564698e-57 | -8.615850e-47 |
| Msa1088390 | Msa1137780 | 0.809828 | 1.559967e-50 | -8.615850e-47 |
| Msa1088390 | Msa1206650 | 0.807983 | 3.872036e-50 | -8.615850e-47 |
| Msa1088390 | Msa1207310 | 0.832443 | 9.424250e-56 | -8.615850e-47 |
| Msa1088390 | Msa1225600 | 0.816531 | 5.271567e-52 | -8.615850e-47 |
| Msa1088390 | Msa1250110 | 0.812011 | 5.253278e-51 | -8.615850e-47 |
| Msa1088390 | Msa1250730 | 0.815519 | 8.866849e-52 | -8.615850e-47 |
| Msa1088390 | Msa1270660 | 0.826707 | 2.340552e-54 | -8.615850e-47 |
| Msa1088390 | Msa1270730 | 0.807596 | 4.679007e-50 | -8.615850e-47 |
| Msa1088390 | Msa1307180 | 0.856015 | 4.279439e-62 | -8.615850e-47 |
| Msa1088390 | Msa1316360 | 0.843742 | 1.162268e-58 | -8.615850e-47 |
| Msa1088390 | Msa1331350 | 0.811554 | 6.607552e-51 | -8.615850e-47 |
| Msa1088390 | Msa1335230 | 0.804353 | 2.250035e-49 | -8.615850e-47 |
| Msa1088390 | Msa1341490 | 0.808456 | 3.069078e-50 | -8.615850e-47 |
| Msa1088390 | Msa1346840 | 0.811749 | 5.990528e-51 | -8.615850e-47 |
| Msa1088390 | Msa1370590 | 0.844210 | 8.706960e-59 | -8.615850e-47 |
| Msa1088390 | Msa1371240 | 0.817894 | 2.601818e-52 | -8.615850e-47 |
| Msa1088390 | Msa1372150 | 0.808095 | 3.664493e-50 | -8.615850e-47 |
| Msa1088390 | Msa1372290 | 0.814828 | 1.263139e-51 | -8.615850e-47 |
| Msa1088390 | Msa1378410 | 0.838288 | 3.144141e-57 | -8.615850e-47 |
| Msa1088390 | Msa1382020 | 0.815229 | 1.028824e-51 | -8.615850e-47 |
| Msa1088390 | Msa1383740 | 0.802323 | 5.924917e-49 | -8.615850e-47 |
| Msa1088390 | Msa1384100 | 0.843288 | 1.536242e-58 | -8.615850e-47 |
| Msa1088390 | Msa1401990 | 0.827667 | 1.378541e-54 | -8.615850e-47 |
| Msa1088390 | Msa1406110 | -0.803554 | 3.298563e-49 | -8.615850e-47 |
| Msa1088390 | Msa1407190 | 0.834422 | 3.025788e-56 | -8.615850e-47 |
| Msa1088390 | Msa1416260 | 0.802209 | 6.254793e-49 | -8.615850e-47 |
| Msa1088390 | Msa1426570 | 0.828472 | 8.824145e-55 | -8.615850e-47 |
| Msa1088390 | Msa1428780 | 0.817753 | 2.800439e-52 | -8.615850e-47 |
| Msa1088390 | Msa1430130 | 0.819962 | 8.815602e-53 | -8.615850e-47 |
| Msa1088390 | Msa1432130 | 0.838019 | 3.687807e-57 | -8.615850e-47 |
| Msa1088390 | Msa1437330 | 0.809899 | 1.506246e-50 | -8.615850e-47 |
| Msa1088390 | Msa1442790 | 0.840479 | 8.485625e-58 | -8.615850e-47 |
| Msa1088390 | Msa1444120 | 0.835419 | 1.696480e-56 | -8.615850e-47 |
| Msa1088390 | Msa1446080 | 0.807386 | 5.184584e-50 | -8.615850e-47 |
| Msa1088390 | Msa1460750 | 0.819375 | 1.200404e-52 | -8.615850e-47 |
| Msa1088390 | Msa1462470 | 0.813344 | 2.684582e-51 | -8.615850e-47 |
| Msa0240300 | Msa1088390 | 0.811307 | 7.474722e-51 | -8.615850e-47 |
| Msa0274970 | Msa1088390 | 0.805632 | 1.215733e-49 | -8.615850e-47 |
| Msa0284450 | Msa1088390 | 0.825520 | 4.483335e-54 | -8.615850e-47 |
| Msa0285330 | Msa1088390 | 0.820210 | 7.737986e-53 | -8.615850e-47 |
| Msa0308440 | Msa1088390 | 0.806377 | 8.473929e-50 | -8.615850e-47 |
| Msa0309270 | Msa1088390 | 0.820892 | 5.394750e-53 | -8.615850e-47 |
| Msa0310430 | Msa1088390 | 0.811878 | 5.615915e-51 | -8.615850e-47 |
| Msa0312910 | Msa1088390 | 0.800168 | 1.635592e-48 | -8.615850e-47 |
| Msa0315680 | Msa1088390 | 0.810386 | 1.182914e-50 | -8.615850e-47 |
| Msa0321690 | Msa1088390 | 0.808996 | 2.352892e-50 | -8.615850e-47 |
| Msa0322680 | Msa1088390 | 0.832362 | 9.872521e-56 | -8.615850e-47 |
| Msa0324240 | Msa1088390 | 0.821305 | 4.333896e-53 | -8.615850e-47 |
| Msa0333970 | Msa1088390 | -0.803923 | 2.765396e-49 | -8.615850e-47 |
| Msa0347750 | Msa1088390 | 0.826226 | 3.047621e-54 | -8.615850e-47 |
| Msa0482940 | Msa1088390 | 0.840725 | 7.314716e-58 | -8.615850e-47 |
| Msa0485490 | Msa1088390 | 0.815564 | 8.666795e-52 | -8.615850e-47 |
| Msa0514610 | Msa1088390 | 0.802730 | 4.883201e-49 | -8.615850e-47 |
| Msa0518170 | Msa1088390 | 0.801348 | 9.395372e-49 | -8.615850e-47 |
| Msa0523050 | Msa1088390 | 0.811891 | 5.578692e-51 | -8.615850e-47 |
| Msa0564130 | Msa1088390 | 0.815919 | 7.221140e-52 | -8.615850e-47 |
| Msa0566350 | Msa1088390 | 0.837528 | 4.929235e-57 | -8.615850e-47 |
| Msa0566750 | Msa1088390 | 0.834203 | 3.432150e-56 | -8.615850e-47 |
| Msa0569780 | Msa1088390 | 0.840617 | 7.806574e-58 | -8.615850e-47 |
| Msa0600450 | Msa1088390 | 0.804289 | 2.320347e-49 | -8.615850e-47 |
| Msa0844110 | Msa1088390 | 0.800711 | 1.268130e-48 | -8.615850e-47 |
| Msa0861470 | Msa1088390 | 0.805683 | 1.186041e-49 | -8.615850e-47 |
| Msa0866400 | Msa1088390 | 0.803964 | 2.711257e-49 | -8.615850e-47 |
| Msa0877710 | Msa1088390 | 0.811742 | 6.013318e-51 | -8.615850e-47 |
| Msa0894710 | Msa1088390 | 0.805925 | 1.054793e-49 | -8.615850e-47 |
| Msa0921420 | Msa1088390 | 0.811100 | 8.288445e-51 | -8.615850e-47 |
| Msa0945240 | Msa1088390 | 0.806400 | 8.378605e-50 | -8.615850e-47 |
| Msa0958030 | Msa1088390 | 0.807625 | 4.613785e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1088390 | MtrunA17_Chr8g0381611 | 99.353 | 309 | 2 | 0 | 21 | 329 | 82 | 390 | 0.0 | 649 |
| Msa1088390 | MtrunA17_Chr8g0381601 | 77.199 | 307 | 70 | 0 | 16 | 322 | 85 | 391 | 0.0 | 524 |
| Msa1088390 | MtrunA17_Chr3g0123571 | 77.636 | 313 | 69 | 1 | 17 | 328 | 87 | 399 | 0.0 | 521 |
| Msa1088390 | MtrunA17_Chr4g0028891 | 75.168 | 298 | 74 | 0 | 19 | 316 | 109 | 406 | 5.05e-173 | 486 |
| Msa1088390 | MtrunA17_Chr7g0227041 | 70.957 | 303 | 87 | 1 | 17 | 318 | 93 | 395 | 8.32e-170 | 478 |
| Msa1088390 | MtrunA17_Chr2g0326801 | 70.548 | 292 | 86 | 0 | 21 | 312 | 87 | 378 | 3.46e-162 | 457 |
| Msa1088390 | MtrunA17_Chr1g0189401 | 44.720 | 322 | 158 | 9 | 10 | 318 | 61 | 375 | 1.07e-83 | 258 |
| Msa1088390 | MtrunA17_Chr2g0281421 | 47.794 | 272 | 131 | 6 | 26 | 286 | 72 | 343 | 1.32e-82 | 255 |
| Msa1088390 | MtrunA17_Chr4g0047961 | 45.583 | 283 | 135 | 6 | 2 | 277 | 42 | 312 | 6.93e-82 | 253 |
| Msa1088390 | MtrunA17_Chr2g0276851 | 46.739 | 276 | 139 | 6 | 28 | 295 | 76 | 351 | 1.98e-81 | 252 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1088390 | AT1G67850.4 | 73.616 | 307 | 81 | 0 | 18 | 324 | 75 | 381 | 1.45e-177 | 497 |
| Msa1088390 | AT1G67850.6 | 73.616 | 307 | 81 | 0 | 18 | 324 | 91 | 397 | 2.94e-177 | 497 |
| Msa1088390 | AT1G67850.7 | 73.616 | 307 | 81 | 0 | 18 | 324 | 91 | 397 | 2.94e-177 | 497 |
| Msa1088390 | AT1G67850.1 | 73.616 | 307 | 81 | 0 | 18 | 324 | 91 | 397 | 2.94e-177 | 497 |
| Msa1088390 | AT1G67850.3 | 73.616 | 307 | 81 | 0 | 18 | 324 | 91 | 397 | 2.94e-177 | 497 |
| Msa1088390 | AT1G67850.2 | 73.616 | 307 | 81 | 0 | 18 | 324 | 91 | 397 | 2.94e-177 | 497 |
| Msa1088390 | AT1G67850.5 | 73.616 | 307 | 81 | 0 | 18 | 324 | 91 | 397 | 2.94e-177 | 497 |
| Msa1088390 | AT2G28310.2 | 74.490 | 294 | 75 | 0 | 21 | 314 | 74 | 367 | 2.50e-173 | 486 |
| Msa1088390 | AT2G28310.1 | 74.490 | 294 | 75 | 0 | 21 | 314 | 74 | 367 | 2.50e-173 | 486 |
| Msa1088390 | AT2G28310.3 | 74.490 | 294 | 75 | 0 | 21 | 314 | 74 | 367 | 2.50e-173 | 486 |
| Msa1088390 | AT1G08040.3 | 73.311 | 296 | 79 | 0 | 21 | 316 | 77 | 372 | 2.51e-172 | 483 |
| Msa1088390 | AT1G08040.2 | 73.311 | 296 | 79 | 0 | 21 | 316 | 81 | 376 | 2.90e-172 | 483 |
| Msa1088390 | AT1G08040.4 | 73.311 | 296 | 79 | 0 | 21 | 316 | 81 | 376 | 2.90e-172 | 483 |
| Msa1088390 | AT1G08040.1 | 73.311 | 296 | 79 | 0 | 21 | 316 | 81 | 376 | 2.90e-172 | 483 |
| Msa1088390 | AT1G13000.2 | 72.973 | 296 | 80 | 0 | 21 | 316 | 98 | 393 | 5.14e-172 | 483 |
| Msa1088390 | AT1G13000.5 | 72.973 | 296 | 80 | 0 | 21 | 316 | 98 | 393 | 5.14e-172 | 483 |
| Msa1088390 | AT1G13000.4 | 72.973 | 296 | 80 | 0 | 21 | 316 | 98 | 393 | 5.14e-172 | 483 |
| Msa1088390 | AT1G13000.1 | 72.973 | 296 | 80 | 0 | 21 | 316 | 98 | 393 | 5.14e-172 | 483 |
| Msa1088390 | AT3G27470.2 | 72.241 | 299 | 83 | 0 | 21 | 319 | 90 | 388 | 8.12e-171 | 480 |
| Msa1088390 | AT3G27470.1 | 72.241 | 299 | 83 | 0 | 21 | 319 | 90 | 388 | 8.12e-171 | 480 |
| Msa1088390 | AT3G27470.4 | 72.241 | 299 | 83 | 0 | 21 | 319 | 90 | 388 | 8.12e-171 | 480 |
| Msa1088390 | AT3G27470.3 | 72.241 | 299 | 83 | 0 | 21 | 319 | 90 | 388 | 8.12e-171 | 480 |
| Msa1088390 | AT3G27470.5 | 72.241 | 299 | 83 | 0 | 21 | 319 | 90 | 388 | 2.50e-170 | 479 |
| Msa1088390 | AT3G26440.5 | 73.401 | 297 | 78 | 1 | 21 | 316 | 111 | 407 | 6.65e-170 | 479 |
| Msa1088390 | AT3G26440.1 | 73.401 | 297 | 78 | 1 | 21 | 316 | 88 | 384 | 6.97e-170 | 478 |
| Msa1088390 | AT3G26440.2 | 73.401 | 297 | 78 | 1 | 21 | 316 | 88 | 384 | 6.97e-170 | 478 |
| Msa1088390 | AT3G26440.6 | 73.401 | 297 | 78 | 1 | 21 | 316 | 111 | 407 | 8.45e-170 | 478 |
| Msa1088390 | AT3G26440.4 | 73.401 | 297 | 78 | 1 | 21 | 316 | 64 | 360 | 1.40e-169 | 476 |
| Msa1088390 | AT1G24570.2 | 67.974 | 306 | 96 | 2 | 18 | 321 | 74 | 379 | 5.98e-160 | 452 |
| Msa1088390 | AT3G26440.3 | 74.909 | 275 | 68 | 1 | 21 | 294 | 88 | 362 | 9.72e-159 | 449 |
| Msa1088390 | AT1G24570.1 | 68.259 | 293 | 91 | 2 | 31 | 321 | 80 | 372 | 5.94e-153 | 434 |
| Msa1088390 | AT1G13000.3 | 75.105 | 237 | 59 | 0 | 21 | 257 | 98 | 334 | 4.60e-138 | 395 |
| Msa1088390 | AT4G12840.2 | 51.362 | 257 | 115 | 6 | 28 | 277 | 76 | 329 | 4.50e-89 | 272 |
| Msa1088390 | AT4G12840.1 | 51.362 | 257 | 115 | 6 | 28 | 277 | 76 | 329 | 5.71e-89 | 272 |
| Msa1088390 | AT4G12840.3 | 51.261 | 238 | 106 | 6 | 47 | 277 | 1 | 235 | 2.12e-82 | 252 |
| Msa1088390 | AT4G18530.1 | 46.619 | 281 | 133 | 8 | 8 | 277 | 54 | 328 | 2.75e-82 | 254 |
| Msa1088390 | AT1G61240.8 | 46.886 | 273 | 136 | 5 | 34 | 297 | 15 | 287 | 3.24e-82 | 253 |
| Msa1088390 | AT4G18530.3 | 46.619 | 281 | 133 | 8 | 8 | 277 | 49 | 323 | 3.54e-82 | 254 |
| Msa1088390 | AT1G61240.4 | 46.886 | 273 | 136 | 5 | 34 | 297 | 82 | 354 | 2.29e-81 | 253 |
| Msa1088390 | AT1G61240.5 | 46.886 | 273 | 136 | 5 | 34 | 297 | 82 | 354 | 2.29e-81 | 253 |
| Msa1088390 | AT1G61240.6 | 46.886 | 273 | 136 | 5 | 34 | 297 | 82 | 354 | 2.29e-81 | 253 |
| Msa1088390 | AT1G61240.2 | 46.886 | 273 | 136 | 5 | 34 | 297 | 82 | 354 | 2.29e-81 | 253 |
| Msa1088390 | AT1G61240.1 | 46.886 | 273 | 136 | 5 | 34 | 297 | 82 | 354 | 2.29e-81 | 253 |
| Msa1088390 | AT1G61240.3 | 46.886 | 273 | 136 | 5 | 34 | 297 | 82 | 354 | 2.29e-81 | 253 |
| Msa1088390 | AT1G61240.7 | 48.438 | 256 | 123 | 5 | 34 | 280 | 82 | 337 | 1.33e-80 | 249 |
| Msa1088390 | AT1G11170.4 | 48.627 | 255 | 122 | 6 | 34 | 279 | 85 | 339 | 1.33e-79 | 246 |
| Msa1088390 | AT1G11170.8 | 48.627 | 255 | 122 | 6 | 34 | 279 | 85 | 339 | 1.33e-79 | 246 |
| Msa1088390 | AT1G11170.3 | 48.627 | 255 | 122 | 6 | 34 | 279 | 85 | 339 | 1.46e-79 | 247 |
| Msa1088390 | AT1G11170.1 | 48.819 | 254 | 121 | 6 | 34 | 278 | 85 | 338 | 4.14e-79 | 248 |
| Msa1088390 | AT1G11170.6 | 48.819 | 254 | 121 | 6 | 34 | 278 | 85 | 338 | 4.14e-79 | 248 |
| Msa1088390 | AT1G11170.5 | 48.819 | 254 | 121 | 6 | 34 | 278 | 85 | 338 | 4.14e-79 | 248 |
| Msa1088390 | AT1G11170.7 | 48.819 | 254 | 121 | 6 | 34 | 278 | 85 | 338 | 4.14e-79 | 248 |
| Msa1088390 | AT4G18530.2 | 48.523 | 237 | 109 | 6 | 28 | 254 | 71 | 304 | 1.59e-73 | 229 |
| Msa1088390 | AT1G11170.2 | 49.345 | 229 | 108 | 5 | 34 | 254 | 85 | 313 | 7.54e-71 | 223 |
| Msa1088390 | AT2G25905.1 | 72.727 | 121 | 32 | 1 | 57 | 176 | 107 | 227 | 2.50e-59 | 190 |
| Msa1088390 | AT1G11170.9 | 55.479 | 146 | 61 | 2 | 34 | 175 | 85 | 230 | 3.91e-50 | 167 |
Find 91 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATGATTGTTTGCAGATT+TGG | 0.233995 | 7_3:-1568281 | Msa1088390:CDS |
| CCAGCTTTAGAACCTCAAAA+AGG | 0.272560 | 7_3:-1567061 | Msa1088390:CDS |
| TTGTGTGTGGCACATGATTC+AGG | 0.273901 | 7_3:-1566783 | Msa1088390:intron |
| CACAAGGTACTTTGGCTTAG+AGG | 0.297454 | 7_3:+1567801 | None:intergenic |
| TGATGATTGTTTGCAGATTT+GGG | 0.313813 | 7_3:-1568280 | Msa1088390:CDS |
| TAGCCTGCCCATGAGAAAAT+TGG | 0.314625 | 7_3:-1566438 | Msa1088390:CDS |
| TGCAGCATTTGTCGAGATTA+TGG | 0.326039 | 7_3:-1566834 | Msa1088390:CDS |
| TATTGATGCAGCTGTGAAAA+AGG | 0.334878 | 7_3:-1567746 | Msa1088390:intron |
| CTTCTTCTTGCGAAGATTGT+GGG | 0.353315 | 7_3:-1568196 | Msa1088390:CDS |
| AATATACATCCTACCAAAAC+TGG | 0.357195 | 7_3:-1565853 | Msa1088390:three_prime_UTR |
| GACTGGGAAGCCGGCATGGC+GGG | 0.360772 | 7_3:-1566257 | Msa1088390:CDS |
| CTTGTTTGTACTAACCTCAT+TGG | 0.361587 | 7_3:+1568167 | None:intergenic |
| TCTGCACCTCTAGGATTTGT+TGG | 0.371914 | 7_3:+1568255 | None:intergenic |
| TTGCAGAATGAATTTGTTCA+TGG | 0.384104 | 7_3:-1566583 | Msa1088390:intron |
| TCATGTGGGATGAAGACCTT+GGG | 0.405546 | 7_3:-1567342 | Msa1088390:CDS |
| ACTCATCCCATTCGGTTGTT+CGG | 0.405576 | 7_3:+1567596 | None:intergenic |
| TCATATGATGCAACAATGTC+TGG | 0.425811 | 7_3:+1567373 | None:intergenic |
| GATTTGCTCGCTCATAACTA+AGG | 0.427980 | 7_3:-1565981 | Msa1088390:exon |
| ACCTTGTGACCTTCACTGTT+GGG | 0.430384 | 7_3:-1567786 | Msa1088390:CDS |
| AAGGATTCTGCTGCTTTGCT+CGG | 0.437840 | 7_3:+1565823 | None:intergenic |
| TATTCCATCACTAGGGGATC+AGG | 0.441095 | 7_3:-1566382 | Msa1088390:intron |
| TTGTTTGTACTAACCTCATT+GGG | 0.441311 | 7_3:+1568168 | None:intergenic |
| CAACTGCAGATACATAAAAC+TGG | 0.444624 | 7_3:-1567113 | Msa1088390:intron |
| ATATATATAATGCTCTATCT+AGG | 0.450454 | 7_3:+1565931 | None:intergenic |
| ACTTCTTCTTGCGAAGATTG+TGG | 0.452133 | 7_3:-1568197 | Msa1088390:CDS |
| CTGCATTTGTCAATCTACCT+TGG | 0.458934 | 7_3:+1566042 | None:intergenic |
| GTCTGGATGCAGAAACCTCT+TGG | 0.469618 | 7_3:+1567390 | None:intergenic |
| TTTCACTGAATTTAAACATA+GGG | 0.471709 | 7_3:+1565750 | None:intergenic |
| TTGGAGTTGTTGATGCTCAA+TGG | 0.477545 | 7_3:-1566419 | Msa1088390:CDS |
| TGATAGGGAGAAGCACAGAC+TGG | 0.481524 | 7_3:-1566274 | Msa1088390:intron |
| GTGAAGGTCACAAGGTACTT+TGG | 0.484389 | 7_3:+1567793 | None:intergenic |
| AGAGGGTATTTACACTTCCC+TGG | 0.486266 | 7_3:+1566869 | None:intergenic |
| ATTTCACTGAATTTAAACAT+AGG | 0.488847 | 7_3:+1565749 | None:intergenic |
| AGGAGAGGTGTGGCATGGAA+TGG | 0.490387 | 7_3:-1566073 | Msa1088390:CDS |
| TAGATTGACAAATGCAGAAA+GGG | 0.492604 | 7_3:-1566036 | Msa1088390:CDS |
| CACAGACTGGGAAGCCGGCA+TGG | 0.494004 | 7_3:-1566261 | Msa1088390:CDS |
| CAAACAATCATCAAAGTAAG+TGG | 0.494420 | 7_3:+1568290 | None:intergenic |
| AGAAGCACAGACTGGGAAGC+CGG | 0.504949 | 7_3:-1566266 | Msa1088390:CDS |
| GGCCATCGTAATGAAATAGA+AGG | 0.512084 | 7_3:+1567617 | None:intergenic |
| GGTAATCTTTCTGCACCTCT+AGG | 0.512786 | 7_3:+1568246 | None:intergenic |
| CGATGGCCGAACAACCGAAT+GGG | 0.514342 | 7_3:-1567602 | Msa1088390:CDS |
| CCACTCAAACTCATCCCATT+CGG | 0.515447 | 7_3:+1567588 | None:intergenic |
| TTCATGTGGGATGAAGACCT+TGG | 0.520316 | 7_3:-1567343 | Msa1088390:CDS |
| CACCAAGGTATTCCATCACT+AGG | 0.521315 | 7_3:-1566390 | Msa1088390:CDS |
| AATGAATTTGTTCATGGATG+GGG | 0.522005 | 7_3:-1566577 | Msa1088390:CDS |
| TACCTTGTGACCTTCACTGT+TGG | 0.524452 | 7_3:-1567787 | Msa1088390:CDS |
| AGAATGAATTTGTTCATGGA+TGG | 0.524742 | 7_3:-1566579 | Msa1088390:CDS |
| TAACATACCGCCCGCCATGC+CGG | 0.534890 | 7_3:+1566247 | None:intergenic |
| ATCCTTCTATTTCATTACGA+TGG | 0.542035 | 7_3:-1567619 | Msa1088390:CDS |
| ACCAAGGTATTCCATCACTA+GGG | 0.546593 | 7_3:-1566389 | Msa1088390:CDS |
| ACTGGTGAAGAAGCATGGCT+TGG | 0.547308 | 7_3:-1567095 | Msa1088390:CDS |
| TTCTTCTTGCGAAGATTGTG+GGG | 0.547373 | 7_3:-1568195 | Msa1088390:CDS |
| ACGATGGCCGAACAACCGAA+TGG | 0.557763 | 7_3:-1567603 | Msa1088390:CDS |
| GTGCAGAAAGATTACCTCCT+GGG | 0.559187 | 7_3:-1568239 | Msa1088390:CDS |
| GATTGAGCATTAACAATCCC+AGG | 0.559299 | 7_3:+1568222 | None:intergenic |
| GAATGAATTTGTTCATGGAT+GGG | 0.560523 | 7_3:-1566578 | Msa1088390:CDS |
| ATTACCTGATCCCCTAGTGA+TGG | 0.561561 | 7_3:+1566378 | None:intergenic |
| TGGGAAGCCGGCATGGCGGG+CGG | 0.562402 | 7_3:-1566254 | Msa1088390:intron |
| ATAAAACTGGTGAAGAAGCA+TGG | 0.584590 | 7_3:-1567100 | Msa1088390:CDS |
| GGTTAAGGAGAGGTGTGGCA+TGG | 0.592433 | 7_3:-1566078 | Msa1088390:CDS |
| GTAGATTGACAAATGCAGAA+AGG | 0.597153 | 7_3:-1566037 | Msa1088390:CDS |
| GATAGGGAGAAGCACAGACT+GGG | 0.599023 | 7_3:-1566273 | Msa1088390:intron |
| ACCCAACAGTGAAGGTCACA+AGG | 0.602730 | 7_3:+1567785 | None:intergenic |
| GGTGCAGAAAGATTACCTCC+TGG | 0.602891 | 7_3:-1568240 | Msa1088390:CDS |
| ATTGTGGGGTCTTCCCAATG+AGG | 0.604631 | 7_3:-1568181 | Msa1088390:intron |
| CTCTTAGGTGGTATGCCAAG+AGG | 0.604637 | 7_3:-1567405 | Msa1088390:intron |
| CTGTTGATACCCAACAGTGA+AGG | 0.608284 | 7_3:+1567777 | None:intergenic |
| ATTGGTTGCAGGTTAAGGAG+AGG | 0.608721 | 7_3:-1566088 | Msa1088390:intron |
| ATCTCGACAAATGCTGCACA+AGG | 0.610292 | 7_3:+1566839 | None:intergenic |
| ATTTGCTCGCTCATAACTAA+GGG | 0.612893 | 7_3:-1565980 | Msa1088390:exon |
| GCTGCACAAGGAGGAAGAAG+AGG | 0.613830 | 7_3:+1566851 | None:intergenic |
| CTGCACAAGGAGGAAGAAGA+GGG | 0.618002 | 7_3:+1566852 | None:intergenic |
| TTTGTTTGTGAACACTCACA+TGG | 0.620605 | 7_3:+1567551 | None:intergenic |
| CGTTAAAATTCTCAACCCCA+AGG | 0.623590 | 7_3:+1567326 | None:intergenic |
| AGACATGCACAAGAGAAACC+AGG | 0.629863 | 7_3:-1566887 | Msa1088390:CDS |
| CCGAATGGGATGAGTTTGAG+TGG | 0.631816 | 7_3:-1567588 | Msa1088390:CDS |
| AGACTGGGAAGCCGGCATGG+CGG | 0.636581 | 7_3:-1566258 | Msa1088390:CDS |
| TTGCAGGTTAAGGAGAGGTG+TGG | 0.643279 | 7_3:-1566083 | Msa1088390:intron |
| GAGATGCATGGCGTTGTGTG+TGG | 0.646944 | 7_3:-1566796 | Msa1088390:CDS |
| AGATTGACAAATGCAGAAAG+GGG | 0.653672 | 7_3:-1566035 | Msa1088390:CDS |
| GACATGCACAAGAGAAACCA+GGG | 0.655147 | 7_3:-1566886 | Msa1088390:CDS |
| CATGTGGGATGAAGACCTTG+GGG | 0.658086 | 7_3:-1567341 | Msa1088390:CDS |
| ATGGAATGGAGAATGTTCCA+AGG | 0.665287 | 7_3:-1566059 | Msa1088390:CDS |
| CCCCTAGTGATGGAATACCT+TGG | 0.673648 | 7_3:+1566388 | None:intergenic |
| CCAAGGTATTCCATCACTAG+GGG | 0.674279 | 7_3:-1566388 | Msa1088390:CDS |
| GTGTTCACAAACAAACCAAG+TGG | 0.686230 | 7_3:-1567543 | Msa1088390:intron |
| TGGGTTCCAACAAATCCTAG+AGG | 0.698583 | 7_3:-1568261 | Msa1088390:CDS |
| GATTGACAAATGCAGAAAGG+GGG | 0.700784 | 7_3:-1566034 | Msa1088390:CDS |
| TCGACAAATGCTGCACAAGG+AGG | 0.701908 | 7_3:+1566842 | None:intergenic |
| GCTCAATGGATTGTTCACCA+AGG | 0.733364 | 7_3:-1566405 | Msa1088390:CDS |
| TGAGCATTAACAATCCCAGG+AGG | 0.775538 | 7_3:+1568225 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATAGTAATTATTTAGTTTA+AGG | + | chr7_3:1566402-1566421 | None:intergenic | 15.0% |
| !! | ATTAATCTATTTATTCTCTT+AGG | - | chr7_3:1566651-1566670 | Msa1088390:intron | 15.0% |
| !!! | AATGGATGATAATATTTTTA+AGG | + | chr7_3:1567413-1567432 | None:intergenic | 15.0% |
| !! | GTAAATAATACTAGTACTAA+TGG | + | chr7_3:1566613-1566632 | None:intergenic | 20.0% |
| !!! | ATATGAGTATATTTTCATGT+GGG | - | chr7_3:1566715-1566734 | Msa1088390:intron | 20.0% |
| !! | AAATTTAAAAACCTTCAACA+TGG | + | chr7_3:1566853-1566872 | None:intergenic | 20.0% |
| !! | AAAAGAACTATGTTGTTAAA+AGG | - | chr7_3:1566875-1566894 | Msa1088390:CDS | 20.0% |
| !!! | CTATATTTTCTTCGAATTTA+AGG | - | chr7_3:1566908-1566927 | Msa1088390:intron | 20.0% |
| !!! | CAAATGTTTTAATAATGCAA+TGG | - | chr7_3:1567349-1567368 | Msa1088390:CDS | 20.0% |
| !! | AAAATAGTTTATGTTACGAA+AGG | + | chr7_3:1567854-1567873 | None:intergenic | 20.0% |
| !! | TACTAATTAACTATAATCGT+CGG | + | chr7_3:1567883-1567902 | None:intergenic | 20.0% |
| !! | TATTTATGTGTATATTTGCA+TGG | - | chr7_3:1567959-1567978 | Msa1088390:intron | 20.0% |
| !! | ATATATATAATGCTCTATCT+AGG | + | chr7_3:1568143-1568162 | None:intergenic | 20.0% |
| !! | TTTCACTGAATTTAAACATA+GGG | + | chr7_3:1568324-1568343 | None:intergenic | 20.0% |
| !! | ATTTCACTGAATTTAAACAT+AGG | + | chr7_3:1568325-1568344 | None:intergenic | 20.0% |
| ! | ACGGAGAACTTATAAAAATA+AGG | - | chr7_3:1566038-1566057 | Msa1088390:CDS | 25.0% |
| ! | TCAAATAAGTTAATCCAAAC+AGG | - | chr7_3:1566152-1566171 | Msa1088390:intron | 25.0% |
| !! | TATGTGCATTTTCAATCTAT+AGG | - | chr7_3:1566191-1566210 | Msa1088390:intron | 25.0% |
| !! | TTTATTAAGTTGCTACTTGT+AGG | - | chr7_3:1566241-1566260 | Msa1088390:intron | 25.0% |
| ! | TAATAACAGAAAACTGAGTT+TGG | + | chr7_3:1566635-1566654 | None:intergenic | 25.0% |
| ! | AATCTATTTATTCTCTTAGG+TGG | - | chr7_3:1566654-1566673 | Msa1088390:intron | 25.0% |
| !! | CATATGAGTATATTTTCATG+TGG | - | chr7_3:1566714-1566733 | Msa1088390:intron | 25.0% |
| ! | TGTTTGACTGTTTATTTGTT+TGG | - | chr7_3:1567151-1567170 | Msa1088390:intron | 25.0% |
| ! | GTGTTACAGTCATAATTTAT+TGG | + | chr7_3:1567457-1567476 | None:intergenic | 25.0% |
| ! | TTATGACTGTAACACAATAA+TGG | - | chr7_3:1567462-1567481 | Msa1088390:intron | 25.0% |
| CAAACAATCATCAAAGTAAG+TGG | + | chr7_3:1565784-1565803 | None:intergenic | 30.0% | |
| ! | TTGATGATTGTTTGCAGATT+TGG | - | chr7_3:1565790-1565809 | Msa1088390:three_prime_UTR | 30.0% |
| TGATGATTGTTTGCAGATTT+GGG | - | chr7_3:1565791-1565810 | Msa1088390:three_prime_UTR | 30.0% | |
| TTGTTTGTACTAACCTCATT+GGG | + | chr7_3:1565906-1565925 | None:intergenic | 30.0% | |
| !! | GTTGTTTTCATAAGCTATCA+CGG | - | chr7_3:1566019-1566038 | Msa1088390:CDS | 30.0% |
| AGATTGAAAATGCACATATG+TGG | + | chr7_3:1566189-1566208 | None:intergenic | 30.0% | |
| ! | GACACTTTAACAGTTTTCAA+AGG | - | chr7_3:1566421-1566440 | Msa1088390:CDS | 30.0% |
| ATCCTTCTATTTCATTACGA+TGG | - | chr7_3:1566452-1566471 | Msa1088390:intron | 30.0% | |
| CAAATTCAAATAGAAAGCAG+AGG | + | chr7_3:1566563-1566582 | None:intergenic | 30.0% | |
| CTCTGCTTTCTATTTGAATT+TGG | - | chr7_3:1566561-1566580 | Msa1088390:CDS | 30.0% | |
| GATTTCAATATCCATGTTGA+AGG | - | chr7_3:1566839-1566858 | Msa1088390:CDS | 30.0% | |
| TTCCATGCTTACTCTTTAAA+AGG | - | chr7_3:1567311-1567330 | Msa1088390:intron | 30.0% | |
| !! | TTCCTTTTAAAGAGTAAGCA+TGG | + | chr7_3:1567316-1567335 | None:intergenic | 30.0% |
| ! | TTGCAGAATGAATTTGTTCA+TGG | - | chr7_3:1567488-1567507 | Msa1088390:intron | 30.0% |
| ! | AGAATGAATTTGTTCATGGA+TGG | - | chr7_3:1567492-1567511 | Msa1088390:intron | 30.0% |
| ! | GAATGAATTTGTTCATGGAT+GGG | - | chr7_3:1567493-1567512 | Msa1088390:intron | 30.0% |
| ! | AATGAATTTGTTCATGGATG+GGG | - | chr7_3:1567494-1567513 | Msa1088390:intron | 30.0% |
| ! | AACAACTCCAATTTTCTCAT+GGG | + | chr7_3:1567643-1567662 | None:intergenic | 30.0% |
| TGTGTATATTTGCATGGTAT+TGG | - | chr7_3:1567965-1567984 | Msa1088390:intron | 30.0% | |
| TAGATTGACAAATGCAGAAA+GGG | - | chr7_3:1568035-1568054 | Msa1088390:intron | 30.0% | |
| AATATACATCCTACCAAAAC+TGG | - | chr7_3:1568218-1568237 | Msa1088390:CDS | 30.0% | |
| CTTGTTTGTACTAACCTCAT+TGG | + | chr7_3:1565907-1565926 | None:intergenic | 35.0% | |
| ATAAGGTCAAAGAAGCTTAC+AGG | - | chr7_3:1566055-1566074 | Msa1088390:CDS | 35.0% | |
| AGTCTGTTTGAGAGAGTTTA+TGG | + | chr7_3:1566106-1566125 | None:intergenic | 35.0% | |
| TATTGATGCAGCTGTGAAAA+AGG | - | chr7_3:1566325-1566344 | Msa1088390:intron | 35.0% | |
| TTTGTTTGTGAACACTCACA+TGG | + | chr7_3:1566523-1566542 | None:intergenic | 35.0% | |
| CAGAGGATTTATTTACCACT+TGG | + | chr7_3:1566546-1566565 | None:intergenic | 35.0% | |
| TCATATGATGCAACAATGTC+TGG | + | chr7_3:1566701-1566720 | None:intergenic | 35.0% | |
| !! | CAGTTTTATGTATCTGCAGT+TGG | + | chr7_3:1566960-1566979 | None:intergenic | 35.0% |
| CAACTGCAGATACATAAAAC+TGG | - | chr7_3:1566958-1566977 | Msa1088390:intron | 35.0% | |
| ATAAAACTGGTGAAGAAGCA+TGG | - | chr7_3:1566971-1566990 | Msa1088390:intron | 35.0% | |
| !! | CAGCTTTAGAACCTCAAAAA+GGG | - | chr7_3:1567011-1567030 | Msa1088390:intron | 35.0% |
| ! | AACCTCAAAAAGGGTTGATT+TGG | - | chr7_3:1567020-1567039 | Msa1088390:CDS | 35.0% |
| ! | TTCCAAATCAACCCTTTTTG+AGG | + | chr7_3:1567025-1567044 | None:intergenic | 35.0% |
| ! | CAACAACTCCAATTTTCTCA+TGG | + | chr7_3:1567644-1567663 | None:intergenic | 35.0% |
| GTAGATTGACAAATGCAGAA+AGG | - | chr7_3:1568034-1568053 | Msa1088390:intron | 35.0% | |
| AGATTGACAAATGCAGAAAG+GGG | - | chr7_3:1568036-1568055 | Msa1088390:intron | 35.0% | |
| ATTTGCTCGCTCATAACTAA+GGG | - | chr7_3:1568091-1568110 | Msa1088390:intron | 35.0% | |
| GATTGAGCATTAACAATCCC+AGG | + | chr7_3:1565852-1565871 | None:intergenic | 40.0% | |
| ACTTCTTCTTGCGAAGATTG+TGG | - | chr7_3:1565874-1565893 | Msa1088390:three_prime_UTR | 40.0% | |
| CTTCTTCTTGCGAAGATTGT+GGG | - | chr7_3:1565875-1565894 | Msa1088390:three_prime_UTR | 40.0% | |
| TTCTTCTTGCGAAGATTGTG+GGG | - | chr7_3:1565876-1565895 | Msa1088390:three_prime_UTR | 40.0% | |
| AAGCTTACAGGCATGTCATA+AGG | - | chr7_3:1566067-1566086 | Msa1088390:CDS | 40.0% | |
| AGATAGAGAGAGTGAGAAAG+AGG | + | chr7_3:1566352-1566371 | None:intergenic | 40.0% | |
| CACTCTCTCTATCTTTGCAT+AGG | - | chr7_3:1566358-1566377 | Msa1088390:intron | 40.0% | |
| GGCCATCGTAATGAAATAGA+AGG | + | chr7_3:1566457-1566476 | None:intergenic | 40.0% | |
| GTGTTCACAAACAAACCAAG+TGG | - | chr7_3:1566528-1566547 | Msa1088390:intron | 40.0% | |
| CGTTAAAATTCTCAACCCCA+AGG | + | chr7_3:1566748-1566767 | None:intergenic | 40.0% | |
| !!! | CCTTTTTGAGGTTCTAAAGC+TGG | + | chr7_3:1567013-1567032 | None:intergenic | 40.0% |
| !! | CCAGCTTTAGAACCTCAAAA+AGG | - | chr7_3:1567010-1567029 | Msa1088390:intron | 40.0% |
| TGCAGCATTTGTCGAGATTA+TGG | - | chr7_3:1567237-1567256 | Msa1088390:intron | 40.0% | |
| CCATCATAAACAGCAGCTAA+TGG | + | chr7_3:1567431-1567450 | None:intergenic | 40.0% | |
| ! | CCATTAGCTGCTGTTTATGA+TGG | - | chr7_3:1567428-1567447 | Msa1088390:intron | 40.0% |
| !! | TGCTTTTAGAAAATGCGTCG+AGG | - | chr7_3:1567526-1567545 | Msa1088390:intron | 40.0% |
| TTGGAGTTGTTGATGCTCAA+TGG | - | chr7_3:1567652-1567671 | Msa1088390:intron | 40.0% | |
| ! | ACCAAGGTATTCCATCACTA+GGG | - | chr7_3:1567682-1567701 | Msa1088390:intron | 40.0% |
| ! | TGTTTTCCTTTGCGCTTGAT+AGG | - | chr7_3:1567781-1567800 | Msa1088390:CDS | 40.0% |
| ! | GTTTTCCTTTGCGCTTGATA+GGG | - | chr7_3:1567782-1567801 | Msa1088390:CDS | 40.0% |
| !! | ATTTGCATGGTATTGGTTGC+AGG | - | chr7_3:1567972-1567991 | Msa1088390:intron | 40.0% |
| !! | ATGGTATTGGTTGCAGGTTA+AGG | - | chr7_3:1567978-1567997 | Msa1088390:intron | 40.0% |
| ATGGAATGGAGAATGTTCCA+AGG | - | chr7_3:1568012-1568031 | Msa1088390:intron | 40.0% | |
| CTGCATTTGTCAATCTACCT+TGG | + | chr7_3:1568032-1568051 | None:intergenic | 40.0% | |
| GATTGACAAATGCAGAAAGG+GGG | - | chr7_3:1568037-1568056 | Msa1088390:intron | 40.0% | |
| !! | AAGGGGGTATTACAAGTCAA+AGG | - | chr7_3:1568053-1568072 | Msa1088390:intron | 40.0% |
| !! | AGGGGGTATTACAAGTCAAA+GGG | - | chr7_3:1568054-1568073 | Msa1088390:intron | 40.0% |
| ! | GATTTGCTCGCTCATAACTA+AGG | - | chr7_3:1568090-1568109 | Msa1088390:intron | 40.0% |
| !! | GGTTTTTGACCAGTTTTGGT+AGG | + | chr7_3:1568230-1568249 | None:intergenic | 40.0% |
| TGGGTTCCAACAAATCCTAG+AGG | - | chr7_3:1565810-1565829 | Msa1088390:three_prime_UTR | 45.0% | |
| !! | TCTGCACCTCTAGGATTTGT+TGG | + | chr7_3:1565819-1565838 | None:intergenic | 45.0% |
| GGTAATCTTTCTGCACCTCT+AGG | + | chr7_3:1565828-1565847 | None:intergenic | 45.0% | |
| GTGCAGAAAGATTACCTCCT+GGG | - | chr7_3:1565832-1565851 | Msa1088390:three_prime_UTR | 45.0% | |
| TGAGCATTAACAATCCCAGG+AGG | + | chr7_3:1565849-1565868 | None:intergenic | 45.0% | |
| TGGTGAGTTAAGTGCCTGTT+TGG | + | chr7_3:1566169-1566188 | None:intergenic | 45.0% | |
| ! | CACAAGGTACTTTGGCTTAG+AGG | + | chr7_3:1566273-1566292 | None:intergenic | 45.0% |
| ! | GTGAAGGTCACAAGGTACTT+TGG | + | chr7_3:1566281-1566300 | None:intergenic | 45.0% |
| TACCTTGTGACCTTCACTGT+TGG | - | chr7_3:1566284-1566303 | Msa1088390:intron | 45.0% | |
| ACCTTGTGACCTTCACTGTT+GGG | - | chr7_3:1566285-1566304 | Msa1088390:intron | 45.0% | |
| CTGTTGATACCCAACAGTGA+AGG | + | chr7_3:1566297-1566316 | None:intergenic | 45.0% | |
| ACTCATCCCATTCGGTTGTT+CGG | + | chr7_3:1566478-1566497 | None:intergenic | 45.0% | |
| CCACTCAAACTCATCCCATT+CGG | + | chr7_3:1566486-1566505 | None:intergenic | 45.0% | |
| TTCATGTGGGATGAAGACCT+TGG | - | chr7_3:1566728-1566747 | Msa1088390:intron | 45.0% | |
| TCATGTGGGATGAAGACCTT+GGG | - | chr7_3:1566729-1566748 | Msa1088390:intron | 45.0% | |
| AGACATGCACAAGAGAAACC+AGG | - | chr7_3:1567184-1567203 | Msa1088390:intron | 45.0% | |
| GACATGCACAAGAGAAACCA+GGG | - | chr7_3:1567185-1567204 | Msa1088390:intron | 45.0% | |
| !! | AGAGGGTATTTACACTTCCC+TGG | + | chr7_3:1567205-1567224 | None:intergenic | 45.0% |
| ATCTCGACAAATGCTGCACA+AGG | + | chr7_3:1567235-1567254 | None:intergenic | 45.0% | |
| CATGCATCTCGCGAAAAAAC+AGG | + | chr7_3:1567265-1567284 | None:intergenic | 45.0% | |
| !!! | CTGTTTTTTCGCGAGATGCA+TGG | - | chr7_3:1567263-1567282 | Msa1088390:intron | 45.0% |
| TTGTGTGTGGCACATGATTC+AGG | - | chr7_3:1567288-1567307 | Msa1088390:intron | 45.0% | |
| TAGCCTGCCCATGAGAAAAT+TGG | - | chr7_3:1567633-1567652 | Msa1088390:CDS | 45.0% | |
| ! | ACTCCAATTTTCTCATGGGC+AGG | + | chr7_3:1567639-1567658 | None:intergenic | 45.0% |
| !! | GCTCAATGGATTGTTCACCA+AGG | - | chr7_3:1567666-1567685 | Msa1088390:intron | 45.0% |
| ! | CACCAAGGTATTCCATCACT+AGG | - | chr7_3:1567681-1567700 | Msa1088390:intron | 45.0% |
| ! | CCAAGGTATTCCATCACTAG+GGG | - | chr7_3:1567683-1567702 | Msa1088390:intron | 45.0% |
| TATTCCATCACTAGGGGATC+AGG | - | chr7_3:1567689-1567708 | Msa1088390:intron | 45.0% | |
| ATTACCTGATCCCCTAGTGA+TGG | + | chr7_3:1567696-1567715 | None:intergenic | 45.0% | |
| ATTGGTTGCAGGTTAAGGAG+AGG | - | chr7_3:1567983-1568002 | Msa1088390:intron | 45.0% | |
| ! | GCTCGGTTTTTGACCAGTTT+TGG | + | chr7_3:1568234-1568253 | None:intergenic | 45.0% |
| !! | AAGGATTCTGCTGCTTTGCT+CGG | + | chr7_3:1568251-1568270 | None:intergenic | 45.0% |
| ! | TCAGCGCTTCAGTTTTCTGA+AGG | + | chr7_3:1568270-1568289 | None:intergenic | 45.0% |
| GGTGCAGAAAGATTACCTCC+TGG | - | chr7_3:1565831-1565850 | Msa1088390:three_prime_UTR | 50.0% | |
| ATTGTGGGGTCTTCCCAATG+AGG | - | chr7_3:1565890-1565909 | Msa1088390:three_prime_UTR | 50.0% | |
| ACCCAACAGTGAAGGTCACA+AGG | + | chr7_3:1566289-1566308 | None:intergenic | 50.0% | |
| CCGAATGGGATGAGTTTGAG+TGG | - | chr7_3:1566483-1566502 | Msa1088390:intron | 50.0% | |
| CTCTTAGGTGGTATGCCAAG+AGG | - | chr7_3:1566666-1566685 | Msa1088390:intron | 50.0% | |
| GTCTGGATGCAGAAACCTCT+TGG | + | chr7_3:1566684-1566703 | None:intergenic | 50.0% | |
| CATGTGGGATGAAGACCTTG+GGG | - | chr7_3:1566730-1566749 | Msa1088390:intron | 50.0% | |
| ! | ACTGGTGAAGAAGCATGGCT+TGG | - | chr7_3:1566976-1566995 | Msa1088390:intron | 50.0% |
| CTGCACAAGGAGGAAGAAGA+GGG | + | chr7_3:1567222-1567241 | None:intergenic | 50.0% | |
| TCGACAAATGCTGCACAAGG+AGG | + | chr7_3:1567232-1567251 | None:intergenic | 50.0% | |
| ! | CCCCTAGTGATGGAATACCT+TGG | + | chr7_3:1567686-1567705 | None:intergenic | 50.0% |
| CTTCTCCCTATCAAGCGCAA+AGG | + | chr7_3:1567790-1567809 | None:intergenic | 50.0% | |
| ! | TGATAGGGAGAAGCACAGAC+TGG | - | chr7_3:1567797-1567816 | Msa1088390:CDS | 50.0% |
| ! | GATAGGGAGAAGCACAGACT+GGG | - | chr7_3:1567798-1567817 | Msa1088390:CDS | 50.0% |
| TTGCAGGTTAAGGAGAGGTG+TGG | - | chr7_3:1567988-1568007 | Msa1088390:intron | 50.0% | |
| ACGATGGCCGAACAACCGAA+TGG | - | chr7_3:1566468-1566487 | Msa1088390:intron | 55.0% | |
| CGATGGCCGAACAACCGAAT+GGG | - | chr7_3:1566469-1566488 | Msa1088390:intron | 55.0% | |
| GCTGCACAAGGAGGAAGAAG+AGG | + | chr7_3:1567223-1567242 | None:intergenic | 55.0% | |
| GAGATGCATGGCGTTGTGTG+TGG | - | chr7_3:1567275-1567294 | Msa1088390:intron | 55.0% | |
| ! | AGAAGCACAGACTGGGAAGC+CGG | - | chr7_3:1567805-1567824 | Msa1088390:CDS | 55.0% |
| ! | GGTTAAGGAGAGGTGTGGCA+TGG | - | chr7_3:1567993-1568012 | Msa1088390:intron | 55.0% |
| ! | AGGAGAGGTGTGGCATGGAA+TGG | - | chr7_3:1567998-1568017 | Msa1088390:intron | 55.0% |
| TAACATACCGCCCGCCATGC+CGG | + | chr7_3:1567827-1567846 | None:intergenic | 60.0% | |
| CACAGACTGGGAAGCCGGCA+TGG | - | chr7_3:1567810-1567829 | Msa1088390:CDS | 65.0% | |
| AGACTGGGAAGCCGGCATGG+CGG | - | chr7_3:1567813-1567832 | Msa1088390:intron | 65.0% | |
| GACTGGGAAGCCGGCATGGC+GGG | - | chr7_3:1567814-1567833 | Msa1088390:intron | 70.0% | |
| ! | TGGGAAGCCGGCATGGCGGG+CGG | - | chr7_3:1567817-1567836 | Msa1088390:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 1565744 | 1568349 | 1565744 | ID=Msa1088390;Name=Msa1088390 |
| chr7_3 | mRNA | 1565744 | 1568349 | 1565744 | ID=Msa1088390-mRNA-1;Parent=Msa1088390;Name=Msa1088390-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|1|0.9|1|1|1|10|239|329 |
| chr7_3 | exon | 1565744 | 1566099 | 1565744 | ID=Msa1088390-mRNA-1:exon:600;Parent=Msa1088390-mRNA-1 |
| chr7_3 | exon | 1566255 | 1566290 | 1566255 | ID=Msa1088390-mRNA-1:exon:599;Parent=Msa1088390-mRNA-1 |
| chr7_3 | exon | 1566383 | 1566457 | 1566383 | ID=Msa1088390-mRNA-1:exon:598;Parent=Msa1088390-mRNA-1 |
| chr7_3 | exon | 1566546 | 1566599 | 1566546 | ID=Msa1088390-mRNA-1:exon:597;Parent=Msa1088390-mRNA-1 |
| chr7_3 | exon | 1566784 | 1566907 | 1566784 | ID=Msa1088390-mRNA-1:exon:596;Parent=Msa1088390-mRNA-1 |
| chr7_3 | exon | 1567013 | 1567126 | 1567013 | ID=Msa1088390-mRNA-1:exon:595;Parent=Msa1088390-mRNA-1 |
| chr7_3 | exon | 1567319 | 1567420 | 1567319 | ID=Msa1088390-mRNA-1:exon:594;Parent=Msa1088390-mRNA-1 |
| chr7_3 | exon | 1567544 | 1567659 | 1567544 | ID=Msa1088390-mRNA-1:exon:593;Parent=Msa1088390-mRNA-1 |
| chr7_3 | exon | 1567747 | 1567830 | 1567747 | ID=Msa1088390-mRNA-1:exon:592;Parent=Msa1088390-mRNA-1 |
| chr7_3 | exon | 1568182 | 1568349 | 1568182 | ID=Msa1088390-mRNA-1:exon:591;Parent=Msa1088390-mRNA-1 |
| chr7_3 | CDS | 1568182 | 1568349 | 1568182 | ID=Msa1088390-mRNA-1:cds;Parent=Msa1088390-mRNA-1 |
| chr7_3 | CDS | 1567747 | 1567830 | 1567747 | ID=Msa1088390-mRNA-1:cds;Parent=Msa1088390-mRNA-1 |
| chr7_3 | CDS | 1567544 | 1567659 | 1567544 | ID=Msa1088390-mRNA-1:cds;Parent=Msa1088390-mRNA-1 |
| chr7_3 | CDS | 1567319 | 1567420 | 1567319 | ID=Msa1088390-mRNA-1:cds;Parent=Msa1088390-mRNA-1 |
| chr7_3 | CDS | 1567013 | 1567126 | 1567013 | ID=Msa1088390-mRNA-1:cds;Parent=Msa1088390-mRNA-1 |
| chr7_3 | CDS | 1566784 | 1566907 | 1566784 | ID=Msa1088390-mRNA-1:cds;Parent=Msa1088390-mRNA-1 |
| chr7_3 | CDS | 1566546 | 1566599 | 1566546 | ID=Msa1088390-mRNA-1:cds;Parent=Msa1088390-mRNA-1 |
| chr7_3 | CDS | 1566383 | 1566457 | 1566383 | ID=Msa1088390-mRNA-1:cds;Parent=Msa1088390-mRNA-1 |
| chr7_3 | CDS | 1566255 | 1566290 | 1566255 | ID=Msa1088390-mRNA-1:cds;Parent=Msa1088390-mRNA-1 |
| chr7_3 | CDS | 1565983 | 1566099 | 1565983 | ID=Msa1088390-mRNA-1:cds;Parent=Msa1088390-mRNA-1 |
| chr7_3 | three_prime_UTR | 1565744 | 1565982 | 1565744 | ID=Msa1088390-mRNA-1:three_prime_utr;Parent=Msa1088390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
