Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272460 | XP_013443992.2 | 100.000 | 119 | 0 | 0 | 1 | 119 | 41 | 159 | 3.63e-83 | 250 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272460 | sp|Q9M9M9|NDUAC_ARATH | 83.621 | 116 | 19 | 0 | 1 | 116 | 41 | 156 | 5.27e-70 | 209 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272460 | B7FMD5 | 100.000 | 119 | 0 | 0 | 1 | 119 | 41 | 159 | 1.73e-83 | 250 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031510 | Msa1272460 | 0.815934 | 7.167814e-52 | -8.615850e-47 |
| Msa0032260 | Msa1272460 | 0.805575 | 1.249141e-49 | -8.615850e-47 |
| Msa0055150 | Msa1272460 | 0.801428 | 9.047718e-49 | -8.615850e-47 |
| Msa0061970 | Msa1272460 | 0.800248 | 1.575760e-48 | -8.615850e-47 |
| Msa0064350 | Msa1272460 | 0.807269 | 5.489072e-50 | -8.615850e-47 |
| Msa0073670 | Msa1272460 | 0.800539 | 1.374718e-48 | -8.615850e-47 |
| Msa0076040 | Msa1272460 | 0.800171 | 1.633697e-48 | -8.615850e-47 |
| Msa0082280 | Msa1272460 | 0.814155 | 1.779619e-51 | -8.615850e-47 |
| Msa0094950 | Msa1272460 | 0.827098 | 1.886927e-54 | -8.615850e-47 |
| Msa0610390 | Msa1272460 | 0.841358 | 4.986943e-58 | -8.615850e-47 |
| Msa0639120 | Msa1272460 | 0.817012 | 4.111109e-52 | -8.615850e-47 |
| Msa0647490 | Msa1272460 | 0.825812 | 3.821789e-54 | -8.615850e-47 |
| Msa0650920 | Msa1272460 | 0.845647 | 3.565046e-59 | -8.615850e-47 |
| Msa0654870 | Msa1272460 | 0.807231 | 5.591068e-50 | -8.615850e-47 |
| Msa0657790 | Msa1272460 | 0.805623 | 1.220585e-49 | -8.615850e-47 |
| Msa0659030 | Msa1272460 | 0.828760 | 7.513606e-55 | -8.615850e-47 |
| Msa0661090 | Msa1272460 | 0.813680 | 2.264063e-51 | -8.615850e-47 |
| Msa0680240 | Msa1272460 | 0.818827 | 1.599575e-52 | -8.615850e-47 |
| Msa0687630 | Msa1272460 | 0.859293 | 4.570669e-63 | -8.615850e-47 |
| Msa0703230 | Msa1272460 | 0.814141 | 1.792207e-51 | -8.615850e-47 |
| Msa0705000 | Msa1272460 | 0.833431 | 5.355939e-56 | -8.615850e-47 |
| Msa0705040 | Msa1272460 | 0.840878 | 6.669862e-58 | -8.615850e-47 |
| Msa0707390 | Msa1272460 | 0.867000 | 1.888722e-65 | -8.615850e-47 |
| Msa0750920 | Msa1272460 | 0.816201 | 6.247451e-52 | -8.615850e-47 |
| Msa0755340 | Msa1272460 | 0.813076 | 3.073063e-51 | -8.615850e-47 |
| Msa0785130 | Msa1272460 | 0.821595 | 3.713302e-53 | -8.615850e-47 |
| Msa0797750 | Msa1272460 | 0.850495 | 1.636704e-60 | -8.615850e-47 |
| Msa0805500 | Msa1272460 | 0.806231 | 9.095423e-50 | -8.615850e-47 |
| Msa0806920 | Msa1272460 | 0.841101 | 5.829015e-58 | -8.615850e-47 |
| Msa0814250 | Msa1272460 | 0.808890 | 2.479350e-50 | -8.615850e-47 |
| Msa0817540 | Msa1272460 | 0.803511 | 3.366835e-49 | -8.615850e-47 |
| Msa0824640 | Msa1272460 | 0.808252 | 3.393614e-50 | -8.615850e-47 |
| Msa0835280 | Msa1272460 | 0.800880 | 1.171120e-48 | -8.615850e-47 |
| Msa0126520 | Msa1272460 | 0.814937 | 1.194594e-51 | -8.615850e-47 |
| Msa0127310 | Msa1272460 | 0.811460 | 6.924133e-51 | -8.615850e-47 |
| Msa0155430 | Msa1272460 | 0.809415 | 1.913608e-50 | -8.615850e-47 |
| Msa0166750 | Msa1272460 | 0.832463 | 9.317644e-56 | -8.615850e-47 |
| Msa0167480 | Msa1272460 | 0.800455 | 1.429478e-48 | -8.615850e-47 |
| Msa0174770 | Msa1272460 | 0.832180 | 1.095130e-55 | -8.615850e-47 |
| Msa0181610 | Msa1272460 | 0.827163 | 1.820514e-54 | -8.615850e-47 |
| Msa0183460 | Msa1272460 | 0.825269 | 5.138959e-54 | -8.615850e-47 |
| Msa0186890 | Msa1272460 | 0.816702 | 4.825203e-52 | -8.615850e-47 |
| Msa0187930 | Msa1272460 | 0.816933 | 4.283483e-52 | -8.615850e-47 |
| Msa0194540 | Msa1272460 | 0.824817 | 6.571151e-54 | -8.615850e-47 |
| Msa0199690 | Msa1272460 | 0.819671 | 1.027806e-52 | -8.615850e-47 |
| Msa0227400 | Msa1272460 | 0.805485 | 1.304730e-49 | -8.615850e-47 |
| Msa0231880 | Msa1272460 | 0.825575 | 4.349304e-54 | -8.615850e-47 |
| Msa0236270 | Msa1272460 | 0.805872 | 1.082097e-49 | -8.615850e-47 |
| Msa1227690 | Msa1272460 | 0.866000 | 3.924790e-65 | -8.615850e-47 |
| Msa1234980 | Msa1272460 | 0.878052 | 3.836102e-69 | -8.615850e-47 |
| Msa1254710 | Msa1272460 | 0.815156 | 1.067863e-51 | -8.615850e-47 |
| Msa1257510 | Msa1272460 | 0.805391 | 1.365517e-49 | -8.615850e-47 |
| Msa1269300 | Msa1272460 | 0.833760 | 4.430436e-56 | -8.615850e-47 |
| Msa1271580 | Msa1272460 | 0.827498 | 1.513049e-54 | -8.615850e-47 |
| Msa1272460 | Msa1276930 | 0.801030 | 1.091262e-48 | -8.615850e-47 |
| Msa1272460 | Msa1281190 | 0.800760 | 1.238877e-48 | -8.615850e-47 |
| Msa1272460 | Msa1286510 | 0.803237 | 3.836793e-49 | -8.615850e-47 |
| Msa1272460 | Msa1294840 | 0.843588 | 1.277427e-58 | -8.615850e-47 |
| Msa1272460 | Msa1304820 | 0.806557 | 7.762002e-50 | -8.615850e-47 |
| Msa1272460 | Msa1307950 | 0.826759 | 2.274061e-54 | -8.615850e-47 |
| Msa1272460 | Msa1310690 | 0.887314 | 1.591174e-72 | -8.615850e-47 |
| Msa1272460 | Msa1335940 | 0.820462 | 6.772529e-53 | -8.615850e-47 |
| Msa1272460 | Msa1344850 | 0.813498 | 2.482660e-51 | -8.615850e-47 |
| Msa1272460 | Msa1349570 | 0.808469 | 3.049740e-50 | -8.615850e-47 |
| Msa1272460 | Msa1363330 | 0.802817 | 4.686099e-49 | -8.615850e-47 |
| Msa1272460 | Msa1363860 | 0.813189 | 2.903767e-51 | -8.615850e-47 |
| Msa1272460 | Msa1365150 | 0.819536 | 1.103326e-52 | -8.615850e-47 |
| Msa1272460 | Msa1367880 | 0.803949 | 2.730201e-49 | -8.615850e-47 |
| Msa1272460 | Msa1370860 | 0.823929 | 1.062852e-53 | -8.615850e-47 |
| Msa1272460 | Msa1386600 | 0.802473 | 5.517508e-49 | -8.615850e-47 |
| Msa1272460 | Msa1387420 | 0.805430 | 1.339867e-49 | -8.615850e-47 |
| Msa1272460 | Msa1397810 | 0.804807 | 1.809351e-49 | -8.615850e-47 |
| Msa1272460 | Msa1397940 | 0.806528 | 7.872749e-50 | -8.615850e-47 |
| Msa1272460 | Msa1404190 | 0.847297 | 1.264120e-59 | -8.615850e-47 |
| Msa1272460 | Msa1427560 | 0.810880 | 9.250325e-51 | -8.615850e-47 |
| Msa1272460 | Msa1431040 | 0.801914 | 7.191273e-49 | -8.615850e-47 |
| Msa1272460 | Msa1435750 | 0.816891 | 4.376313e-52 | -8.615850e-47 |
| Msa1272460 | Msa1438640 | 0.830105 | 3.541063e-55 | -8.615850e-47 |
| Msa1272460 | Msa1442850 | 0.860378 | 2.154461e-63 | -8.615850e-47 |
| Msa1272460 | Msa1448690 | 0.802894 | 4.517643e-49 | -8.615850e-47 |
| Msa1272460 | Msa1450280 | 0.820974 | 5.165349e-53 | -8.615850e-47 |
| Msa1272460 | Msa1462860 | 0.811496 | 6.801349e-51 | -8.615850e-47 |
| Msa1272460 | Msa1465080 | 0.852149 | 5.580466e-61 | -8.615850e-47 |
| Msa0376690 | Msa1272460 | 0.801057 | 1.077249e-48 | -8.615850e-47 |
| Msa0392940 | Msa1272460 | 0.822475 | 2.322987e-53 | -8.615850e-47 |
| Msa0394400 | Msa1272460 | 0.825144 | 5.502078e-54 | -8.615850e-47 |
| Msa0402330 | Msa1272460 | 0.814411 | 1.561577e-51 | -8.615850e-47 |
| Msa0413450 | Msa1272460 | 0.811299 | 7.506502e-51 | -8.615850e-47 |
| Msa0416400 | Msa1272460 | 0.822947 | 1.803585e-53 | -8.615850e-47 |
| Msa0437690 | Msa1272460 | -0.802459 | 5.553900e-49 | -8.615850e-47 |
| Msa0463500 | Msa1272460 | 0.802727 | 4.890571e-49 | -8.615850e-47 |
| Msa0471590 | Msa1272460 | 0.815783 | 7.745439e-52 | -8.615850e-47 |
| Msa1019240 | Msa1272460 | 0.809848 | 1.544400e-50 | -8.615850e-47 |
| Msa1019260 | Msa1272460 | 0.812820 | 3.498356e-51 | -8.615850e-47 |
| Msa1025940 | Msa1272460 | 0.811771 | 5.925531e-51 | -8.615850e-47 |
| Msa1089840 | Msa1272460 | 0.821963 | 3.052641e-53 | -8.615850e-47 |
| Msa0244780 | Msa1272460 | 0.815061 | 1.121232e-51 | -8.615850e-47 |
| Msa0260240 | Msa1272460 | 0.831189 | 1.922380e-55 | -8.615850e-47 |
| Msa0260280 | Msa1272460 | 0.831721 | 1.421315e-55 | -8.615850e-47 |
| Msa0268130 | Msa1272460 | 0.813977 | 1.948014e-51 | -8.615850e-47 |
| Msa0280430 | Msa1272460 | 0.838504 | 2.765755e-57 | -8.615850e-47 |
| Msa0291520 | Msa1272460 | 0.846441 | 2.168268e-59 | -8.615850e-47 |
| Msa0298990 | Msa1272460 | 0.807855 | 4.121910e-50 | -8.615850e-47 |
| Msa0304260 | Msa1272460 | 0.822142 | 2.774777e-53 | -8.615850e-47 |
| Msa0304300 | Msa1272460 | 0.812367 | 4.392847e-51 | -8.615850e-47 |
| Msa0304330 | Msa1272460 | 0.802678 | 5.005054e-49 | -8.615850e-47 |
| Msa0304590 | Msa1272460 | 0.827818 | 1.267723e-54 | -8.615850e-47 |
| Msa0304660 | Msa1272460 | 0.820254 | 7.558480e-53 | -8.615850e-47 |
| Msa0310410 | Msa1272460 | 0.821430 | 4.053855e-53 | -8.615850e-47 |
| Msa0331700 | Msa1272460 | 0.822715 | 2.042240e-53 | -8.615850e-47 |
| Msa0355270 | Msa1272460 | 0.823967 | 1.041384e-53 | -8.615850e-47 |
| Msa1126510 | Msa1272460 | 0.832724 | 8.028193e-56 | -8.615850e-47 |
| Msa1126770 | Msa1272460 | 0.848280 | 6.778778e-60 | -8.615850e-47 |
| Msa1127830 | Msa1272460 | 0.818584 | 1.816258e-52 | -8.615850e-47 |
| Msa1127890 | Msa1272460 | 0.804353 | 2.250131e-49 | -8.615850e-47 |
| Msa1166860 | Msa1272460 | 0.829801 | 4.200902e-55 | -8.615850e-47 |
| Msa1166870 | Msa1272460 | 0.827607 | 1.425312e-54 | -8.615850e-47 |
| Msa1184370 | Msa1272460 | 0.887431 | 1.436154e-72 | -8.615850e-47 |
| Msa1201830 | Msa1272460 | 0.853009 | 3.171629e-61 | -8.615850e-47 |
| Msa1210810 | Msa1272460 | 0.817390 | 3.380550e-52 | -8.615850e-47 |
| Msa0505150 | Msa1272460 | 0.839652 | 1.393663e-57 | -8.615850e-47 |
| Msa0508590 | Msa1272460 | 0.806583 | 7.667573e-50 | -8.615850e-47 |
| Msa0508630 | Msa1272460 | 0.807382 | 5.193636e-50 | -8.615850e-47 |
| Msa0513440 | Msa1272460 | 0.807448 | 5.030160e-50 | -8.615850e-47 |
| Msa0526540 | Msa1272460 | 0.808317 | 3.286770e-50 | -8.615850e-47 |
| Msa0541860 | Msa1272460 | 0.816838 | 4.499443e-52 | -8.615850e-47 |
| Msa0552810 | Msa1272460 | 0.821478 | 3.952790e-53 | -8.615850e-47 |
| Msa0560470 | Msa1272460 | 0.806916 | 6.518517e-50 | -8.615850e-47 |
| Msa0576940 | Msa1272460 | 0.809296 | 2.030112e-50 | -8.615850e-47 |
| Msa0581070 | Msa1272460 | 0.842437 | 2.587152e-58 | -8.615850e-47 |
| Msa0864010 | Msa1272460 | 0.812680 | 3.754019e-51 | -8.615850e-47 |
| Msa0900630 | Msa1272460 | 0.801593 | 8.368380e-49 | -8.615850e-47 |
| Msa0966270 | Msa1272460 | 0.810265 | 1.255910e-50 | -8.615850e-47 |
| Msa0966720 | Msa1272460 | -0.817196 | 3.737926e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272460 | MtrunA17_Chr8g0337431 | 100.000 | 119 | 0 | 0 | 1 | 119 | 41 | 159 | 3.34e-87 | 250 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1272460 | AT3G03100.1 | 83.621 | 116 | 19 | 0 | 1 | 116 | 41 | 156 | 5.36e-71 | 209 |
| Msa1272460 | AT3G03100.2 | 82.759 | 116 | 20 | 0 | 1 | 116 | 41 | 156 | 3.61e-70 | 207 |
Find 33 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATCCAGGGCAGAGAAAC+TGG | 0.299097 | 8_3:-6065726 | Msa1272460:CDS |
| CAAACCAAGATCCACAATAT+TGG | 0.303383 | 8_3:-6067364 | Msa1272460:CDS |
| AAACCAAGATCCACAATATT+GGG | 0.303795 | 8_3:-6067363 | Msa1272460:CDS |
| TGCCCCAATATTGTGGATCT+TGG | 0.327061 | 8_3:+6067360 | None:intergenic |
| CTGGTCCAGTTTCTCTGCCC+TGG | 0.348930 | 8_3:+6065721 | None:intergenic |
| TTCCTGCTGAATGGCATGGC+TGG | 0.388219 | 8_3:-6065975 | Msa1272460:CDS |
| AAAACTGAAAACACACAGTA+TGG | 0.408491 | 8_3:-6067295 | Msa1272460:intron |
| CCATATTCACGGTTCGTTTG+TGG | 0.419524 | 8_3:+6065681 | None:intergenic |
| AAGGGACATGCTCTCAATCC+AGG | 0.420399 | 8_3:-6065739 | Msa1272460:CDS |
| GTCTAGATATAATGCTTCTC+AGG | 0.450196 | 8_3:-6065998 | Msa1272460:CDS |
| CTTCTCAGGTTCCTGCTGAA+TGG | 0.475351 | 8_3:-6065984 | Msa1272460:CDS |
| AATATTGGGGCAACGCTTGT+TGG | 0.475730 | 8_3:-6067349 | Msa1272460:CDS |
| GATCATAAAGAAAATCTGTC+TGG | 0.476518 | 8_3:-6065790 | Msa1272460:CDS |
| CTTGTTGGTGTTGACAAATA+CGG | 0.476795 | 8_3:-6067334 | Msa1272460:CDS |
| GGACTGCCATGGTTGGTACC+TGG | 0.513101 | 8_3:+6065702 | None:intergenic |
| CAGGTTCCTGCTGAATGGCA+TGG | 0.525614 | 8_3:-6065979 | Msa1272460:CDS |
| TGGATTGAGAGCATGTCCCT+TGG | 0.535784 | 8_3:+6065741 | None:intergenic |
| AGCCAGCCATGCCATTCAGC+AGG | 0.538183 | 8_3:+6065973 | None:intergenic |
| CAAGCGTTGCCCCAATATTG+TGG | 0.553229 | 8_3:+6067353 | None:intergenic |
| AGAGTTTATCTATCATTCCA+AGG | 0.554573 | 8_3:-6065758 | Msa1272460:CDS |
| GGTTCGTTTGTGGACTGCCA+TGG | 0.557488 | 8_3:+6065691 | None:intergenic |
| CGTTTGTGGACTGCCATGGT+TGG | 0.558192 | 8_3:+6065695 | None:intergenic |
| AAAATTTGGCAGGAAGACAC+AGG | 0.598790 | 8_3:-6066041 | Msa1272460:intron |
| GAGTTTATCTATCATTCCAA+GGG | 0.600374 | 8_3:-6065757 | Msa1272460:CDS |
| AGGGACATGCTCTCAATCCA+GGG | 0.603322 | 8_3:-6065738 | Msa1272460:CDS |
| AAAGAAAATCTGTCTGGACA+TGG | 0.605520 | 8_3:-6065784 | Msa1272460:CDS |
| AAGCGAATTTACCTCATCGC+CGG | 0.625501 | 8_3:+6065930 | None:intergenic |
| AACTGATCACACCGGCGATG+AGG | 0.628022 | 8_3:-6065941 | Msa1272460:intron |
| AACCAAGATCCACAATATTG+GGG | 0.636179 | 8_3:-6067362 | Msa1272460:CDS |
| TTTGGCAGGAAGACACAGGT+GGG | 0.636329 | 8_3:-6066037 | Msa1272460:intron |
| ATTTGGCAGGAAGACACAGG+TGG | 0.636657 | 8_3:-6066038 | Msa1272460:intron |
| ACTGGACCAGGTACCAACCA+TGG | 0.665621 | 8_3:-6065708 | Msa1272460:CDS |
| CACTTCATAACTGATCACAC+CGG | 0.696701 | 8_3:-6065949 | Msa1272460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAATGAAATAAGAA+TGG | - | chr8_3:6066466-6066485 | Msa1272460:intron | 10.0% |
| !! | AAATAAAATGAAATAAGAAT+GGG | - | chr8_3:6066467-6066486 | Msa1272460:intron | 10.0% |
| !! | AAAATAAAATGAAATAAGAA+TGG | - | chr8_3:6066466-6066485 | Msa1272460:intron | 10.0% |
| !! | AAATAAAATGAAATAAGAAT+GGG | - | chr8_3:6066467-6066486 | Msa1272460:intron | 10.0% |
| !! | TAACTAACTAACTAATTAAA+GGG | + | chr8_3:6065980-6065999 | None:intergenic | 15.0% |
| !! | ATAACTAACTAACTAATTAA+AGG | + | chr8_3:6065981-6066000 | None:intergenic | 15.0% |
| !! | TGACAATAAATTATAGAATA+TGG | + | chr8_3:6066926-6066945 | None:intergenic | 15.0% |
| !!! | CTTTATATTTTTTTAGCATA+TGG | + | chr8_3:6067174-6067193 | None:intergenic | 15.0% |
| !! | TAACTAACTAACTAATTAAA+GGG | + | chr8_3:6065980-6065999 | None:intergenic | 15.0% |
| !! | ATAACTAACTAACTAATTAA+AGG | + | chr8_3:6065981-6066000 | None:intergenic | 15.0% |
| !! | TGACAATAAATTATAGAATA+TGG | + | chr8_3:6066926-6066945 | None:intergenic | 15.0% |
| !!! | CTTTATATTTTTTTAGCATA+TGG | + | chr8_3:6067174-6067193 | None:intergenic | 15.0% |
| !!! | ATTATTAGTTTTTATGCTGA+GGG | + | chr8_3:6066426-6066445 | None:intergenic | 20.0% |
| !! | TAAATGTCTAATGCAATTAT+TGG | - | chr8_3:6066566-6066585 | Msa1272460:intron | 20.0% |
| !! | ATATCACAATATTTACAATC+AGG | - | chr8_3:6066621-6066640 | Msa1272460:intron | 20.0% |
| !! | GACACATTATTGTTAAAATT+TGG | - | chr8_3:6066996-6067015 | Msa1272460:intron | 20.0% |
| !! | TATTACTTAGGAAAAGAATT+AGG | + | chr8_3:6067151-6067170 | None:intergenic | 20.0% |
| !! | TTCATTGCAAATATTATGTT+GGG | + | chr8_3:6067198-6067217 | None:intergenic | 20.0% |
| !! | ATTCATTGCAAATATTATGT+TGG | + | chr8_3:6067199-6067218 | None:intergenic | 20.0% |
| !!! | TTCTTTTATTGAAACCAAAA+AGG | - | chr8_3:6067229-6067248 | Msa1272460:intron | 20.0% |
| !!! | ATTATTAGTTTTTATGCTGA+GGG | + | chr8_3:6066426-6066445 | None:intergenic | 20.0% |
| !! | TAAATGTCTAATGCAATTAT+TGG | - | chr8_3:6066566-6066585 | Msa1272460:intron | 20.0% |
| !! | ATATCACAATATTTACAATC+AGG | - | chr8_3:6066621-6066640 | Msa1272460:intron | 20.0% |
| !! | GACACATTATTGTTAAAATT+TGG | - | chr8_3:6066996-6067015 | Msa1272460:intron | 20.0% |
| !! | TATTACTTAGGAAAAGAATT+AGG | + | chr8_3:6067151-6067170 | None:intergenic | 20.0% |
| !! | TTCATTGCAAATATTATGTT+GGG | + | chr8_3:6067198-6067217 | None:intergenic | 20.0% |
| !! | ATTCATTGCAAATATTATGT+TGG | + | chr8_3:6067199-6067218 | None:intergenic | 20.0% |
| !!! | TTCTTTTATTGAAACCAAAA+AGG | - | chr8_3:6067229-6067248 | Msa1272460:intron | 20.0% |
| ! | TTTATTCTGATAAATGGATG+TGG | - | chr8_3:6065822-6065841 | Msa1272460:CDS | 25.0% |
| ! | TATGACATAATGAACATGAT+AGG | - | chr8_3:6065949-6065968 | Msa1272460:CDS | 25.0% |
| ! | CTTATCATTTGAGAGAATTA+CGG | - | chr8_3:6066046-6066065 | Msa1272460:intron | 25.0% |
| ! | GACATAACTAACTAACTAAA+GGG | + | chr8_3:6066093-6066112 | None:intergenic | 25.0% |
| ! | TGACATAACTAACTAACTAA+AGG | + | chr8_3:6065985-6066004 | None:intergenic | 25.0% |
| ! | TGACAAAATGTCATTCTTAT+AGG | + | chr8_3:6066313-6066332 | None:intergenic | 25.0% |
| ! | AAAAACTTATAAGGATGACA+TGG | - | chr8_3:6066341-6066360 | Msa1272460:intron | 25.0% |
| !!! | CATTATTAGTTTTTATGCTG+AGG | + | chr8_3:6066427-6066446 | None:intergenic | 25.0% |
| ! | AAAACTAATAATGCTAGCAT+TGG | - | chr8_3:6066434-6066453 | Msa1272460:intron | 25.0% |
| ! | AATGAAATAAGAATGGGATA+TGG | - | chr8_3:6066473-6066492 | Msa1272460:intron | 25.0% |
| ! | ATCTCATATGAGTTTCTATA+TGG | - | chr8_3:6066522-6066541 | Msa1272460:intron | 25.0% |
| !! | ATATTGATTGCTTACTTGTA+AGG | + | chr8_3:6066605-6066624 | None:intergenic | 25.0% |
| ! | CATTATTGTTAAAATTTGGC+AGG | - | chr8_3:6067000-6067019 | Msa1272460:intron | 25.0% |
| ! | TTTAGCATATGGTATTACTT+AGG | + | chr8_3:6067163-6067182 | None:intergenic | 25.0% |
| ! | TCATTGCAAATATTATGTTG+GGG | + | chr8_3:6067197-6067216 | None:intergenic | 25.0% |
| ! | TTATTGAAACCAAAAAGGTA+CGG | - | chr8_3:6067234-6067253 | Msa1272460:intron | 25.0% |
| ! | TTTATTCTGATAAATGGATG+TGG | - | chr8_3:6065822-6065841 | Msa1272460:CDS | 25.0% |
| ! | TATGACATAATGAACATGAT+AGG | - | chr8_3:6065949-6065968 | Msa1272460:CDS | 25.0% |
| ! | CTTATCATTTGAGAGAATTA+CGG | - | chr8_3:6066046-6066065 | Msa1272460:intron | 25.0% |
| ! | GACATAACTAACTAACTAAA+GGG | + | chr8_3:6066093-6066112 | None:intergenic | 25.0% |
| ! | TGACATAACTAACTAACTAA+AGG | + | chr8_3:6065985-6066004 | None:intergenic | 25.0% |
| ! | TGACAAAATGTCATTCTTAT+AGG | + | chr8_3:6066313-6066332 | None:intergenic | 25.0% |
| ! | AAAAACTTATAAGGATGACA+TGG | - | chr8_3:6066341-6066360 | Msa1272460:intron | 25.0% |
| !!! | CATTATTAGTTTTTATGCTG+AGG | + | chr8_3:6066427-6066446 | None:intergenic | 25.0% |
| ! | AAAACTAATAATGCTAGCAT+TGG | - | chr8_3:6066434-6066453 | Msa1272460:intron | 25.0% |
| ! | AATGAAATAAGAATGGGATA+TGG | - | chr8_3:6066473-6066492 | Msa1272460:intron | 25.0% |
| ! | ATCTCATATGAGTTTCTATA+TGG | - | chr8_3:6066522-6066541 | Msa1272460:intron | 25.0% |
| !! | ATATTGATTGCTTACTTGTA+AGG | + | chr8_3:6066605-6066624 | None:intergenic | 25.0% |
| ! | CATTATTGTTAAAATTTGGC+AGG | - | chr8_3:6067000-6067019 | Msa1272460:intron | 25.0% |
| ! | TTTAGCATATGGTATTACTT+AGG | + | chr8_3:6067163-6067182 | None:intergenic | 25.0% |
| ! | TCATTGCAAATATTATGTTG+GGG | + | chr8_3:6067197-6067216 | None:intergenic | 25.0% |
| ! | TTATTGAAACCAAAAAGGTA+CGG | - | chr8_3:6067234-6067253 | Msa1272460:intron | 25.0% |
| AAACCAAGATCCACAATATT+GGG | - | chr8_3:6065688-6065707 | Msa1272460:CDS | 30.0% | |
| AAAACTGAAAACACACAGTA+TGG | - | chr8_3:6065756-6065775 | Msa1272460:CDS | 30.0% | |
| GTGTGGTTTATTCTGATAAA+TGG | - | chr8_3:6065816-6065835 | Msa1272460:CDS | 30.0% | |
| CTTATCATTCGAGAGAATTA+CGG | - | chr8_3:6066155-6066174 | Msa1272460:intron | 30.0% | |
| !! | TGTTCTAGTTCTCTAATAGA+GGG | - | chr8_3:6066222-6066241 | Msa1272460:intron | 30.0% |
| AATCATCTTATAGGCATGTT+CGG | + | chr8_3:6066712-6066731 | None:intergenic | 30.0% | |
| ATGGAATGCAATCATCTTAT+AGG | + | chr8_3:6066721-6066740 | None:intergenic | 30.0% | |
| TAAGATGATTGCATTCCATT+TGG | - | chr8_3:6066722-6066741 | Msa1272460:intron | 30.0% | |
| AAGATGATTGCATTCCATTT+GGG | - | chr8_3:6066723-6066742 | Msa1272460:intron | 30.0% | |
| ! | AAGTGTTATTGCCATTGATT+GGG | + | chr8_3:6066856-6066875 | None:intergenic | 30.0% |
| ! | GAAAGTATGATTCACTTTAG+AGG | - | chr8_3:6066889-6066908 | Msa1272460:intron | 30.0% |
| TATTGTCAAGACTCAAACTT+TGG | - | chr8_3:6066938-6066957 | Msa1272460:intron | 30.0% | |
| GATCATAAAGAAAATCTGTC+TGG | - | chr8_3:6067261-6067280 | Msa1272460:intron | 30.0% | |
| AGAGTTTATCTATCATTCCA+AGG | - | chr8_3:6067293-6067312 | Msa1272460:intron | 30.0% | |
| GAGTTTATCTATCATTCCAA+GGG | - | chr8_3:6067294-6067313 | Msa1272460:intron | 30.0% | |
| AAACCAAGATCCACAATATT+GGG | - | chr8_3:6065688-6065707 | Msa1272460:CDS | 30.0% | |
| AAAACTGAAAACACACAGTA+TGG | - | chr8_3:6065756-6065775 | Msa1272460:CDS | 30.0% | |
| GTGTGGTTTATTCTGATAAA+TGG | - | chr8_3:6065816-6065835 | Msa1272460:CDS | 30.0% | |
| CTTATCATTCGAGAGAATTA+CGG | - | chr8_3:6066155-6066174 | Msa1272460:intron | 30.0% | |
| !! | TGTTCTAGTTCTCTAATAGA+GGG | - | chr8_3:6066222-6066241 | Msa1272460:intron | 30.0% |
| AATCATCTTATAGGCATGTT+CGG | + | chr8_3:6066712-6066731 | None:intergenic | 30.0% | |
| ATGGAATGCAATCATCTTAT+AGG | + | chr8_3:6066721-6066740 | None:intergenic | 30.0% | |
| TAAGATGATTGCATTCCATT+TGG | - | chr8_3:6066722-6066741 | Msa1272460:intron | 30.0% | |
| AAGATGATTGCATTCCATTT+GGG | - | chr8_3:6066723-6066742 | Msa1272460:intron | 30.0% | |
| ! | AAGTGTTATTGCCATTGATT+GGG | + | chr8_3:6066856-6066875 | None:intergenic | 30.0% |
| ! | GAAAGTATGATTCACTTTAG+AGG | - | chr8_3:6066889-6066908 | Msa1272460:intron | 30.0% |
| TATTGTCAAGACTCAAACTT+TGG | - | chr8_3:6066938-6066957 | Msa1272460:intron | 30.0% | |
| GATCATAAAGAAAATCTGTC+TGG | - | chr8_3:6067261-6067280 | Msa1272460:intron | 30.0% | |
| AGAGTTTATCTATCATTCCA+AGG | - | chr8_3:6067293-6067312 | Msa1272460:intron | 30.0% | |
| GAGTTTATCTATCATTCCAA+GGG | - | chr8_3:6067294-6067313 | Msa1272460:intron | 30.0% | |
| CAAACCAAGATCCACAATAT+TGG | - | chr8_3:6065687-6065706 | Msa1272460:CDS | 35.0% | |
| AACCAAGATCCACAATATTG+GGG | - | chr8_3:6065689-6065708 | Msa1272460:CDS | 35.0% | |
| !! | CTTGTTGGTGTTGACAAATA+CGG | - | chr8_3:6065717-6065736 | Msa1272460:CDS | 35.0% |
| TCTATATCTGTATGTGTGTG+TGG | - | chr8_3:6065799-6065818 | Msa1272460:CDS | 35.0% | |
| TTTGAGAGAATTACGGCATT+TGG | - | chr8_3:6066053-6066072 | Msa1272460:intron | 35.0% | |
| TTGAGAGAATTACGGCATTT+GGG | - | chr8_3:6066054-6066073 | Msa1272460:intron | 35.0% | |
| AATTACGGCATTTGGGTAAT+TGG | - | chr8_3:6066061-6066080 | Msa1272460:intron | 35.0% | |
| ATTACGGCATTTGGGTAATT+GGG | - | chr8_3:6066062-6066081 | Msa1272460:intron | 35.0% | |
| AATTACGGCATCTAGGTAAT+TGG | - | chr8_3:6066170-6066189 | Msa1272460:intron | 35.0% | |
| ATTACGGCATCTAGGTAATT+GGG | - | chr8_3:6066171-6066190 | Msa1272460:intron | 35.0% | |
| AGAACACTGTAGAACTTTGA+GGG | + | chr8_3:6066208-6066227 | None:intergenic | 35.0% | |
| TAGAACACTGTAGAACTTTG+AGG | + | chr8_3:6066209-6066228 | None:intergenic | 35.0% | |
| !! | GTGTTCTAGTTCTCTAATAG+AGG | - | chr8_3:6066221-6066240 | Msa1272460:intron | 35.0% |
| TGTTTGGTAAGTAGGAAGTA+GGG | + | chr8_3:6066254-6066273 | None:intergenic | 35.0% | |
| ! | CCTCTCTATCTTGTTATGAT+GGG | + | chr8_3:6066281-6066300 | None:intergenic | 35.0% |
| CCATCATAACAAGATAGAGA+GGG | - | chr8_3:6066279-6066298 | Msa1272460:intron | 35.0% | |
| CATCATAACAAGATAGAGAG+GGG | - | chr8_3:6066280-6066299 | Msa1272460:intron | 35.0% | |
| ATCATAACAAGATAGAGAGG+GGG | - | chr8_3:6066281-6066300 | Msa1272460:intron | 35.0% | |
| AACTTATAAGGATGACATGG+TGG | - | chr8_3:6066344-6066363 | Msa1272460:intron | 35.0% | |
| !! | TTAGTTTTTATGCTGAGGGT+GGG | + | chr8_3:6066422-6066441 | None:intergenic | 35.0% |
| !!! | ATTAGTTTTTATGCTGAGGG+TGG | + | chr8_3:6066423-6066442 | None:intergenic | 35.0% |
| TATGGAGTAGAATACTACTG+AGG | - | chr8_3:6066540-6066559 | Msa1272460:intron | 35.0% | |
| ATGGAGTAGAATACTACTGA+GGG | - | chr8_3:6066541-6066560 | Msa1272460:intron | 35.0% | |
| ! | GAAGTGTTATTGCCATTGAT+TGG | + | chr8_3:6066857-6066876 | None:intergenic | 35.0% |
| GTCTAGATATAATGCTTCTC+AGG | - | chr8_3:6067053-6067072 | Msa1272460:intron | 35.0% | |
| AAAGAAAATCTGTCTGGACA+TGG | - | chr8_3:6067267-6067286 | Msa1272460:intron | 35.0% | |
| CAAACCAAGATCCACAATAT+TGG | - | chr8_3:6065687-6065706 | Msa1272460:CDS | 35.0% | |
| AACCAAGATCCACAATATTG+GGG | - | chr8_3:6065689-6065708 | Msa1272460:CDS | 35.0% | |
| !! | CTTGTTGGTGTTGACAAATA+CGG | - | chr8_3:6065717-6065736 | Msa1272460:CDS | 35.0% |
| TCTATATCTGTATGTGTGTG+TGG | - | chr8_3:6065799-6065818 | Msa1272460:CDS | 35.0% | |
| TTTGAGAGAATTACGGCATT+TGG | - | chr8_3:6066053-6066072 | Msa1272460:intron | 35.0% | |
| TTGAGAGAATTACGGCATTT+GGG | - | chr8_3:6066054-6066073 | Msa1272460:intron | 35.0% | |
| AATTACGGCATTTGGGTAAT+TGG | - | chr8_3:6066061-6066080 | Msa1272460:intron | 35.0% | |
| ATTACGGCATTTGGGTAATT+GGG | - | chr8_3:6066062-6066081 | Msa1272460:intron | 35.0% | |
| AATTACGGCATCTAGGTAAT+TGG | - | chr8_3:6066170-6066189 | Msa1272460:intron | 35.0% | |
| ATTACGGCATCTAGGTAATT+GGG | - | chr8_3:6066171-6066190 | Msa1272460:intron | 35.0% | |
| AGAACACTGTAGAACTTTGA+GGG | + | chr8_3:6066208-6066227 | None:intergenic | 35.0% | |
| TAGAACACTGTAGAACTTTG+AGG | + | chr8_3:6066209-6066228 | None:intergenic | 35.0% | |
| !! | GTGTTCTAGTTCTCTAATAG+AGG | - | chr8_3:6066221-6066240 | Msa1272460:intron | 35.0% |
| TGTTTGGTAAGTAGGAAGTA+GGG | + | chr8_3:6066254-6066273 | None:intergenic | 35.0% | |
| ! | CCTCTCTATCTTGTTATGAT+GGG | + | chr8_3:6066281-6066300 | None:intergenic | 35.0% |
| CCATCATAACAAGATAGAGA+GGG | - | chr8_3:6066279-6066298 | Msa1272460:intron | 35.0% | |
| CATCATAACAAGATAGAGAG+GGG | - | chr8_3:6066280-6066299 | Msa1272460:intron | 35.0% | |
| ATCATAACAAGATAGAGAGG+GGG | - | chr8_3:6066281-6066300 | Msa1272460:intron | 35.0% | |
| AACTTATAAGGATGACATGG+TGG | - | chr8_3:6066344-6066363 | Msa1272460:intron | 35.0% | |
| !! | TTAGTTTTTATGCTGAGGGT+GGG | + | chr8_3:6066422-6066441 | None:intergenic | 35.0% |
| !!! | ATTAGTTTTTATGCTGAGGG+TGG | + | chr8_3:6066423-6066442 | None:intergenic | 35.0% |
| TATGGAGTAGAATACTACTG+AGG | - | chr8_3:6066540-6066559 | Msa1272460:intron | 35.0% | |
| ATGGAGTAGAATACTACTGA+GGG | - | chr8_3:6066541-6066560 | Msa1272460:intron | 35.0% | |
| ! | GAAGTGTTATTGCCATTGAT+TGG | + | chr8_3:6066857-6066876 | None:intergenic | 35.0% |
| GTCTAGATATAATGCTTCTC+AGG | - | chr8_3:6067053-6067072 | Msa1272460:intron | 35.0% | |
| AAAGAAAATCTGTCTGGACA+TGG | - | chr8_3:6067267-6067286 | Msa1272460:intron | 35.0% | |
| ACAGATATAGACAGAGAGAG+CGG | + | chr8_3:6065790-6065809 | None:intergenic | 40.0% | |
| AAAACCAGAATGCTTGAAGC+TGG | + | chr8_3:6065911-6065930 | None:intergenic | 40.0% | |
| ! | TAGGTAATTGGGTGGTTTGT+AGG | - | chr8_3:6066182-6066201 | Msa1272460:intron | 40.0% |
| GTTTGGTAAGTAGGAAGTAG+GGG | + | chr8_3:6066253-6066272 | None:intergenic | 40.0% | |
| CTGTTTGGTAAGTAGGAAGT+AGG | + | chr8_3:6066255-6066274 | None:intergenic | 40.0% | |
| CTACTTCCTACTTACCAAAC+AGG | - | chr8_3:6066253-6066272 | Msa1272460:intron | 40.0% | |
| ! | TGTTATGATGGGAACCTGTT+TGG | + | chr8_3:6066270-6066289 | None:intergenic | 40.0% |
| CCCATCATAACAAGATAGAG+AGG | - | chr8_3:6066278-6066297 | Msa1272460:intron | 40.0% | |
| ! | CCCTCTCTATCTTGTTATGA+TGG | + | chr8_3:6066282-6066301 | None:intergenic | 40.0% |
| ! | TAGTTTTTATGCTGAGGGTG+GGG | + | chr8_3:6066421-6066440 | None:intergenic | 40.0% |
| TGGGATATGGTGTAATGTTG+TGG | - | chr8_3:6066486-6066505 | Msa1272460:intron | 40.0% | |
| ! | CCATTGATTGGGAAATCAAC+GGG | + | chr8_3:6066845-6066864 | None:intergenic | 40.0% |
| ! | GCCATTGATTGGGAAATCAA+CGG | + | chr8_3:6066846-6066865 | None:intergenic | 40.0% |
| GTCAAGACTCAAACTTTGGT+TGG | - | chr8_3:6066942-6066961 | Msa1272460:intron | 40.0% | |
| AAAATTTGGCAGGAAGACAC+AGG | - | chr8_3:6067010-6067029 | Msa1272460:intron | 40.0% | |
| CACTTCATAACTGATCACAC+CGG | - | chr8_3:6067102-6067121 | Msa1272460:intron | 40.0% | |
| ! | TGATCAAGACCGTACCTTTT+TGG | + | chr8_3:6067246-6067265 | None:intergenic | 40.0% |
| ACAGATATAGACAGAGAGAG+CGG | + | chr8_3:6065790-6065809 | None:intergenic | 40.0% | |
| AAAACCAGAATGCTTGAAGC+TGG | + | chr8_3:6065911-6065930 | None:intergenic | 40.0% | |
| ! | TAGGTAATTGGGTGGTTTGT+AGG | - | chr8_3:6066182-6066201 | Msa1272460:intron | 40.0% |
| GTTTGGTAAGTAGGAAGTAG+GGG | + | chr8_3:6066253-6066272 | None:intergenic | 40.0% | |
| CTGTTTGGTAAGTAGGAAGT+AGG | + | chr8_3:6066255-6066274 | None:intergenic | 40.0% | |
| CTACTTCCTACTTACCAAAC+AGG | - | chr8_3:6066253-6066272 | Msa1272460:intron | 40.0% | |
| ! | TGTTATGATGGGAACCTGTT+TGG | + | chr8_3:6066270-6066289 | None:intergenic | 40.0% |
| CCCATCATAACAAGATAGAG+AGG | - | chr8_3:6066278-6066297 | Msa1272460:intron | 40.0% | |
| ! | CCCTCTCTATCTTGTTATGA+TGG | + | chr8_3:6066282-6066301 | None:intergenic | 40.0% |
| ! | TAGTTTTTATGCTGAGGGTG+GGG | + | chr8_3:6066421-6066440 | None:intergenic | 40.0% |
| TGGGATATGGTGTAATGTTG+TGG | - | chr8_3:6066486-6066505 | Msa1272460:intron | 40.0% | |
| ! | CCATTGATTGGGAAATCAAC+GGG | + | chr8_3:6066845-6066864 | None:intergenic | 40.0% |
| ! | GCCATTGATTGGGAAATCAA+CGG | + | chr8_3:6066846-6066865 | None:intergenic | 40.0% |
| GTCAAGACTCAAACTTTGGT+TGG | - | chr8_3:6066942-6066961 | Msa1272460:intron | 40.0% | |
| AAAATTTGGCAGGAAGACAC+AGG | - | chr8_3:6067010-6067029 | Msa1272460:intron | 40.0% | |
| CACTTCATAACTGATCACAC+CGG | - | chr8_3:6067102-6067121 | Msa1272460:intron | 40.0% | |
| ! | TGATCAAGACCGTACCTTTT+TGG | + | chr8_3:6067246-6067265 | None:intergenic | 40.0% |
| TGCCCCAATATTGTGGATCT+TGG | + | chr8_3:6065694-6065713 | None:intergenic | 45.0% | |
| AATATTGGGGCAACGCTTGT+TGG | - | chr8_3:6065702-6065721 | Msa1272460:CDS | 45.0% | |
| AGATATAGACAGAGAGAGCG+GGG | + | chr8_3:6065788-6065807 | None:intergenic | 45.0% | |
| CAGATATAGACAGAGAGAGC+GGG | + | chr8_3:6065789-6065808 | None:intergenic | 45.0% | |
| AAGACCAGTTGCGATCACTT+GGG | - | chr8_3:6065876-6065895 | Msa1272460:intron | 45.0% | |
| TCGAGAGAATTACGGCATCT+AGG | - | chr8_3:6066163-6066182 | Msa1272460:intron | 45.0% | |
| TGGGAACCTGTTTGGTAAGT+AGG | + | chr8_3:6066262-6066281 | None:intergenic | 45.0% | |
| !! | TAAGGATGACATGGTGGATG+AGG | - | chr8_3:6066350-6066369 | Msa1272460:intron | 45.0% |
| AGTTAAGGAGTGGAGTGATG+AGG | - | chr8_3:6066379-6066398 | Msa1272460:intron | 45.0% | |
| GCACACACAATTGTCCCAAA+TGG | + | chr8_3:6066740-6066759 | None:intergenic | 45.0% | |
| !! | CCCGTTGATTTCCCAATCAA+TGG | - | chr8_3:6066842-6066861 | Msa1272460:intron | 45.0% |
| AAGCGAATTTACCTCATCGC+CGG | + | chr8_3:6067124-6067143 | None:intergenic | 45.0% | |
| TGCCCCAATATTGTGGATCT+TGG | + | chr8_3:6065694-6065713 | None:intergenic | 45.0% | |
| AATATTGGGGCAACGCTTGT+TGG | - | chr8_3:6065702-6065721 | Msa1272460:CDS | 45.0% | |
| AGATATAGACAGAGAGAGCG+GGG | + | chr8_3:6065788-6065807 | None:intergenic | 45.0% | |
| CAGATATAGACAGAGAGAGC+GGG | + | chr8_3:6065789-6065808 | None:intergenic | 45.0% | |
| AAGACCAGTTGCGATCACTT+GGG | - | chr8_3:6065876-6065895 | Msa1272460:intron | 45.0% | |
| TCGAGAGAATTACGGCATCT+AGG | - | chr8_3:6066163-6066182 | Msa1272460:intron | 45.0% | |
| TGGGAACCTGTTTGGTAAGT+AGG | + | chr8_3:6066262-6066281 | None:intergenic | 45.0% | |
| !! | TAAGGATGACATGGTGGATG+AGG | - | chr8_3:6066350-6066369 | Msa1272460:intron | 45.0% |
| AGTTAAGGAGTGGAGTGATG+AGG | - | chr8_3:6066379-6066398 | Msa1272460:intron | 45.0% | |
| GCACACACAATTGTCCCAAA+TGG | + | chr8_3:6066740-6066759 | None:intergenic | 45.0% | |
| !! | CCCGTTGATTTCCCAATCAA+TGG | - | chr8_3:6066842-6066861 | Msa1272460:intron | 45.0% |
| AAGCGAATTTACCTCATCGC+CGG | + | chr8_3:6067124-6067143 | None:intergenic | 45.0% | |
| !! | AAAAAAAAAAAAAACTTATA+AGG | - | chr8_3:6066332-6066351 | Msa1272460:intron | 5.0% |
| !! | AAAAAAAAAAAAAACTTATA+AGG | - | chr8_3:6066332-6066351 | Msa1272460:intron | 5.0% |
| ! | CAAGCGTTGCCCCAATATTG+TGG | + | chr8_3:6065701-6065720 | None:intergenic | 50.0% |
| ! | CAAGTGATCGCAACTGGTCT+TGG | + | chr8_3:6065877-6065896 | None:intergenic | 50.0% |
| CAAGACCAGTTGCGATCACT+TGG | - | chr8_3:6065875-6065894 | Msa1272460:intron | 50.0% | |
| ATCGCCAGCTTCAAGCATTC+TGG | - | chr8_3:6065904-6065923 | Msa1272460:intron | 50.0% | |
| ACGGCATCTAGGTAATTGGG+TGG | - | chr8_3:6066174-6066193 | Msa1272460:intron | 50.0% | |
| !! | GATGACATGGTGGATGAGGT+GGG | - | chr8_3:6066354-6066373 | Msa1272460:intron | 50.0% |
| TGGATGAGGTGGGAGAGTTA+AGG | - | chr8_3:6066364-6066383 | Msa1272460:intron | 50.0% | |
| TAAGGAGTGGAGTGATGAGG+AGG | - | chr8_3:6066382-6066401 | Msa1272460:intron | 50.0% | |
| TGGAGTGATGAGGAGGTCAA+TGG | - | chr8_3:6066389-6066408 | Msa1272460:intron | 50.0% | |
| TGTGTGCAACACACAGCGAA+AGG | - | chr8_3:6066753-6066772 | Msa1272460:intron | 50.0% | |
| ATTTGGCAGGAAGACACAGG+TGG | - | chr8_3:6067013-6067032 | Msa1272460:intron | 50.0% | |
| TTTGGCAGGAAGACACAGGT+GGG | - | chr8_3:6067014-6067033 | Msa1272460:intron | 50.0% | |
| CTTCTCAGGTTCCTGCTGAA+TGG | - | chr8_3:6067067-6067086 | Msa1272460:intron | 50.0% | |
| ! | TGGATTGAGAGCATGTCCCT+TGG | + | chr8_3:6067313-6067332 | None:intergenic | 50.0% |
| AAGGGACATGCTCTCAATCC+AGG | - | chr8_3:6067312-6067331 | Msa1272460:CDS | 50.0% | |
| AGGGACATGCTCTCAATCCA+GGG | - | chr8_3:6067313-6067332 | Msa1272460:CDS | 50.0% | |
| TCAATCCAGGGCAGAGAAAC+TGG | - | chr8_3:6067325-6067344 | Msa1272460:CDS | 50.0% | |
| ! | CAAGCGTTGCCCCAATATTG+TGG | + | chr8_3:6065701-6065720 | None:intergenic | 50.0% |
| ! | CAAGTGATCGCAACTGGTCT+TGG | + | chr8_3:6065877-6065896 | None:intergenic | 50.0% |
| CAAGACCAGTTGCGATCACT+TGG | - | chr8_3:6065875-6065894 | Msa1272460:intron | 50.0% | |
| ATCGCCAGCTTCAAGCATTC+TGG | - | chr8_3:6065904-6065923 | Msa1272460:intron | 50.0% | |
| ACGGCATCTAGGTAATTGGG+TGG | - | chr8_3:6066174-6066193 | Msa1272460:intron | 50.0% | |
| !! | GATGACATGGTGGATGAGGT+GGG | - | chr8_3:6066354-6066373 | Msa1272460:intron | 50.0% |
| TGGATGAGGTGGGAGAGTTA+AGG | - | chr8_3:6066364-6066383 | Msa1272460:intron | 50.0% | |
| TAAGGAGTGGAGTGATGAGG+AGG | - | chr8_3:6066382-6066401 | Msa1272460:intron | 50.0% | |
| TGGAGTGATGAGGAGGTCAA+TGG | - | chr8_3:6066389-6066408 | Msa1272460:intron | 50.0% | |
| TGTGTGCAACACACAGCGAA+AGG | - | chr8_3:6066753-6066772 | Msa1272460:intron | 50.0% | |
| ATTTGGCAGGAAGACACAGG+TGG | - | chr8_3:6067013-6067032 | Msa1272460:intron | 50.0% | |
| TTTGGCAGGAAGACACAGGT+GGG | - | chr8_3:6067014-6067033 | Msa1272460:intron | 50.0% | |
| CTTCTCAGGTTCCTGCTGAA+TGG | - | chr8_3:6067067-6067086 | Msa1272460:intron | 50.0% | |
| ! | TGGATTGAGAGCATGTCCCT+TGG | + | chr8_3:6067313-6067332 | None:intergenic | 50.0% |
| AAGGGACATGCTCTCAATCC+AGG | - | chr8_3:6067312-6067331 | Msa1272460:CDS | 50.0% | |
| AGGGACATGCTCTCAATCCA+GGG | - | chr8_3:6067313-6067332 | Msa1272460:CDS | 50.0% | |
| TCAATCCAGGGCAGAGAAAC+TGG | - | chr8_3:6067325-6067344 | Msa1272460:CDS | 50.0% | |
| !! | CTGGTCTTGGCTCAAGGGAT+TGG | + | chr8_3:6065864-6065883 | None:intergenic | 55.0% |
| !! | CGCAACTGGTCTTGGCTCAA+GGG | + | chr8_3:6065869-6065888 | None:intergenic | 55.0% |
| !! | TCGCAACTGGTCTTGGCTCA+AGG | + | chr8_3:6065870-6065889 | None:intergenic | 55.0% |
| !! | GGATGACATGGTGGATGAGG+TGG | - | chr8_3:6066353-6066372 | Msa1272460:intron | 55.0% |
| GAGGTGGGAGAGTTAAGGAG+TGG | - | chr8_3:6066369-6066388 | Msa1272460:intron | 55.0% | |
| CAGGTTCCTGCTGAATGGCA+TGG | - | chr8_3:6067072-6067091 | Msa1272460:intron | 55.0% | |
| TTCCTGCTGAATGGCATGGC+TGG | - | chr8_3:6067076-6067095 | Msa1272460:intron | 55.0% | |
| AACTGATCACACCGGCGATG+AGG | - | chr8_3:6067110-6067129 | Msa1272460:intron | 55.0% | |
| ACTGGACCAGGTACCAACCA+TGG | - | chr8_3:6067343-6067362 | Msa1272460:CDS | 55.0% | |
| ! | CGTTTGTGGACTGCCATGGT+TGG | + | chr8_3:6067359-6067378 | None:intergenic | 55.0% |
| ! | GGTTCGTTTGTGGACTGCCA+TGG | + | chr8_3:6067363-6067382 | None:intergenic | 55.0% |
| !! | CTGGTCTTGGCTCAAGGGAT+TGG | + | chr8_3:6065864-6065883 | None:intergenic | 55.0% |
| !! | CGCAACTGGTCTTGGCTCAA+GGG | + | chr8_3:6065869-6065888 | None:intergenic | 55.0% |
| !! | TCGCAACTGGTCTTGGCTCA+AGG | + | chr8_3:6065870-6065889 | None:intergenic | 55.0% |
| !! | GGATGACATGGTGGATGAGG+TGG | - | chr8_3:6066353-6066372 | Msa1272460:intron | 55.0% |
| GAGGTGGGAGAGTTAAGGAG+TGG | - | chr8_3:6066369-6066388 | Msa1272460:intron | 55.0% | |
| CAGGTTCCTGCTGAATGGCA+TGG | - | chr8_3:6067072-6067091 | Msa1272460:intron | 55.0% | |
| TTCCTGCTGAATGGCATGGC+TGG | - | chr8_3:6067076-6067095 | Msa1272460:intron | 55.0% | |
| AACTGATCACACCGGCGATG+AGG | - | chr8_3:6067110-6067129 | Msa1272460:intron | 55.0% | |
| ACTGGACCAGGTACCAACCA+TGG | - | chr8_3:6067343-6067362 | Msa1272460:CDS | 55.0% | |
| ! | CGTTTGTGGACTGCCATGGT+TGG | + | chr8_3:6067359-6067378 | None:intergenic | 55.0% |
| ! | GGTTCGTTTGTGGACTGCCA+TGG | + | chr8_3:6067363-6067382 | None:intergenic | 55.0% |
| GCAGCCCAAGTGATCGCAAC+TGG | + | chr8_3:6065883-6065902 | None:intergenic | 60.0% | |
| AGCCAGCCATGCCATTCAGC+AGG | + | chr8_3:6067081-6067100 | None:intergenic | 60.0% | |
| CTGGTCCAGTTTCTCTGCCC+TGG | + | chr8_3:6067333-6067352 | None:intergenic | 60.0% | |
| CAGGGCAGAGAAACTGGACC+AGG | - | chr8_3:6067331-6067350 | Msa1272460:CDS | 60.0% | |
| ! | GGACTGCCATGGTTGGTACC+TGG | + | chr8_3:6067352-6067371 | None:intergenic | 60.0% |
| GCAGCCCAAGTGATCGCAAC+TGG | + | chr8_3:6065883-6065902 | None:intergenic | 60.0% | |
| AGCCAGCCATGCCATTCAGC+AGG | + | chr8_3:6067081-6067100 | None:intergenic | 60.0% | |
| CTGGTCCAGTTTCTCTGCCC+TGG | + | chr8_3:6067333-6067352 | None:intergenic | 60.0% | |
| CAGGGCAGAGAAACTGGACC+AGG | - | chr8_3:6067331-6067350 | Msa1272460:CDS | 60.0% | |
| ! | GGACTGCCATGGTTGGTACC+TGG | + | chr8_3:6067352-6067371 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 6065687 | 6067386 | 6065687 | ID=Msa1272460;Name=Msa1272460 |
| chr8_3 | mRNA | 6065687 | 6067386 | 6065687 | ID=Msa1272460-mRNA-1;Parent=Msa1272460;Name=Msa1272460-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|0.66|3|0|119 |
| chr8_3 | exon | 6067296 | 6067386 | 6067296 | ID=Msa1272460-mRNA-1:exon:2216;Parent=Msa1272460-mRNA-1 |
| chr8_3 | exon | 6065942 | 6066051 | 6065942 | ID=Msa1272460-mRNA-1:exon:2215;Parent=Msa1272460-mRNA-1 |
| chr8_3 | exon | 6065687 | 6065845 | 6065687 | ID=Msa1272460-mRNA-1:exon:2214;Parent=Msa1272460-mRNA-1 |
| chr8_3 | CDS | 6067296 | 6067386 | 6067296 | ID=Msa1272460-mRNA-1:cds;Parent=Msa1272460-mRNA-1 |
| chr8_3 | CDS | 6065942 | 6066051 | 6065942 | ID=Msa1272460-mRNA-1:cds;Parent=Msa1272460-mRNA-1 |
| chr8_3 | CDS | 6065687 | 6065845 | 6065687 | ID=Msa1272460-mRNA-1:cds;Parent=Msa1272460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
