Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59678.t1 | XP_003614512.1 | 85.6 | 341 | 29 | 5 | 1 | 324 | 1 | 338 | 5.60E-158 | 567 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59678.t1 | G7JZC5 | 85.6 | 341 | 29 | 5 | 1 | 324 | 1 | 338 | 4.1e-158 | 567.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene59678 | 0.839098 | 1.94E-57 | -1.69E-46 |
MS.gene049171 | MS.gene59678 | 0.84791 | 8.57E-60 | -1.69E-46 |
MS.gene049217 | MS.gene59678 | 0.851998 | 6.16E-61 | -1.69E-46 |
MS.gene049222 | MS.gene59678 | 0.88804 | 8.39E-73 | -1.69E-46 |
MS.gene049232 | MS.gene59678 | 0.813227 | 2.85E-51 | -1.69E-46 |
MS.gene049285 | MS.gene59678 | 0.861744 | 8.27E-64 | -1.69E-46 |
MS.gene049320 | MS.gene59678 | 0.858727 | 6.75E-63 | -1.69E-46 |
MS.gene049427 | MS.gene59678 | 0.857392 | 1.68E-62 | -1.69E-46 |
MS.gene049609 | MS.gene59678 | 0.861402 | 1.05E-63 | -1.69E-46 |
MS.gene049615 | MS.gene59678 | 0.806366 | 8.52E-50 | -1.69E-46 |
MS.gene049627 | MS.gene59678 | 0.804339 | 2.26E-49 | -1.69E-46 |
MS.gene049633 | MS.gene59678 | 0.834 | 3.86E-56 | -1.69E-46 |
MS.gene049805 | MS.gene59678 | 0.868699 | 5.38E-66 | -1.69E-46 |
MS.gene05010 | MS.gene59678 | 0.827981 | 1.16E-54 | -1.69E-46 |
MS.gene050163 | MS.gene59678 | 0.845651 | 3.56E-59 | -1.69E-46 |
MS.gene050165 | MS.gene59678 | 0.826892 | 2.11E-54 | -1.69E-46 |
MS.gene050323 | MS.gene59678 | 0.806963 | 6.37E-50 | -1.69E-46 |
MS.gene050333 | MS.gene59678 | 0.845958 | 2.93E-59 | -1.69E-46 |
MS.gene050380 | MS.gene59678 | -0.800926 | 1.15E-48 | -1.69E-46 |
MS.gene050432 | MS.gene59678 | 0.826008 | 3.43E-54 | -1.69E-46 |
MS.gene050504 | MS.gene59678 | 0.857665 | 1.40E-62 | -1.69E-46 |
MS.gene050518 | MS.gene59678 | 0.863797 | 1.93E-64 | -1.69E-46 |
MS.gene050520 | MS.gene59678 | 0.807681 | 4.49E-50 | -1.69E-46 |
MS.gene050538 | MS.gene59678 | 0.869733 | 2.48E-66 | -1.69E-46 |
MS.gene050577 | MS.gene59678 | 0.830835 | 2.35E-55 | -1.69E-46 |
MS.gene050593 | MS.gene59678 | 0.881322 | 2.64E-70 | -1.69E-46 |
MS.gene050612 | MS.gene59678 | 0.859232 | 4.77E-63 | -1.69E-46 |
MS.gene050662 | MS.gene59678 | 0.802293 | 6.01E-49 | -1.69E-46 |
MS.gene050670 | MS.gene59678 | 0.832997 | 6.87E-56 | -1.69E-46 |
MS.gene050675 | MS.gene59678 | 0.829458 | 5.09E-55 | -1.69E-46 |
MS.gene050699 | MS.gene59678 | 0.845077 | 5.09E-59 | -1.69E-46 |
MS.gene050747 | MS.gene59678 | 0.890255 | 1.16E-73 | -1.69E-46 |
MS.gene050772 | MS.gene59678 | 0.875306 | 3.42E-68 | -1.69E-46 |
MS.gene05080 | MS.gene59678 | 0.852568 | 4.24E-61 | -1.69E-46 |
MS.gene05081 | MS.gene59678 | 0.825286 | 5.09E-54 | -1.69E-46 |
MS.gene050868 | MS.gene59678 | 0.837889 | 3.98E-57 | -1.69E-46 |
MS.gene050871 | MS.gene59678 | 0.83761 | 4.69E-57 | -1.69E-46 |
MS.gene050950 | MS.gene59678 | 0.888792 | 4.31E-73 | -1.69E-46 |
MS.gene050986 | MS.gene59678 | 0.816211 | 6.22E-52 | -1.69E-46 |
MS.gene05100 | MS.gene59678 | 0.824268 | 8.85E-54 | -1.69E-46 |
MS.gene05105 | MS.gene59678 | 0.833122 | 6.39E-56 | -1.69E-46 |
MS.gene051228 | MS.gene59678 | 0.811781 | 5.90E-51 | -1.69E-46 |
MS.gene051317 | MS.gene59678 | 0.808053 | 3.74E-50 | -1.69E-46 |
MS.gene051387 | MS.gene59678 | 0.889253 | 2.86E-73 | -1.69E-46 |
MS.gene051551 | MS.gene59678 | 0.813581 | 2.38E-51 | -1.69E-46 |
MS.gene051617 | MS.gene59678 | 0.803859 | 2.85E-49 | -1.69E-46 |
MS.gene051666 | MS.gene59678 | 0.874356 | 7.20E-68 | -1.69E-46 |
MS.gene051694 | MS.gene59678 | 0.849226 | 3.70E-60 | -1.69E-46 |
MS.gene051810 | MS.gene59678 | 0.830052 | 3.65E-55 | -1.69E-46 |
MS.gene051838 | MS.gene59678 | 0.825387 | 4.82E-54 | -1.69E-46 |
MS.gene051858 | MS.gene59678 | 0.833944 | 3.99E-56 | -1.69E-46 |
MS.gene052164 | MS.gene59678 | 0.813227 | 2.85E-51 | -1.69E-46 |
MS.gene052271 | MS.gene59678 | 0.832883 | 7.33E-56 | -1.69E-46 |
MS.gene052379 | MS.gene59678 | 0.869333 | 3.35E-66 | -1.69E-46 |
MS.gene052421 | MS.gene59678 | 0.826414 | 2.75E-54 | -1.69E-46 |
MS.gene052481 | MS.gene59678 | 0.829171 | 5.98E-55 | -1.69E-46 |
MS.gene052482 | MS.gene59678 | 0.821689 | 3.53E-53 | -1.69E-46 |
MS.gene052484 | MS.gene59678 | 0.841245 | 5.34E-58 | -1.69E-46 |
MS.gene052485 | MS.gene59678 | 0.820102 | 8.19E-53 | -1.69E-46 |
MS.gene052486 | MS.gene59678 | 0.83011 | 3.53E-55 | -1.69E-46 |
MS.gene052501 | MS.gene59678 | 0.813172 | 2.93E-51 | -1.69E-46 |
MS.gene052503 | MS.gene59678 | 0.816852 | 4.47E-52 | -1.69E-46 |
MS.gene052505 | MS.gene59678 | 0.812558 | 3.99E-51 | -1.69E-46 |
MS.gene052506 | MS.gene59678 | 0.820865 | 5.47E-53 | -1.69E-46 |
MS.gene052605 | MS.gene59678 | 0.807737 | 4.37E-50 | -1.69E-46 |
MS.gene052615 | MS.gene59678 | 0.871206 | 8.16E-67 | -1.69E-46 |
MS.gene052822 | MS.gene59678 | 0.814203 | 1.74E-51 | -1.69E-46 |
MS.gene052823 | MS.gene59678 | 0.811779 | 5.90E-51 | -1.69E-46 |
MS.gene052825 | MS.gene59678 | 0.810877 | 9.26E-51 | -1.69E-46 |
MS.gene052870 | MS.gene59678 | 0.80979 | 1.59E-50 | -1.69E-46 |
MS.gene052872 | MS.gene59678 | 0.81263 | 3.85E-51 | -1.69E-46 |
MS.gene052916 | MS.gene59678 | 0.819054 | 1.42E-52 | -1.69E-46 |
MS.gene052966 | MS.gene59678 | 0.834763 | 2.48E-56 | -1.69E-46 |
MS.gene052982 | MS.gene59678 | 0.810042 | 1.40E-50 | -1.69E-46 |
MS.gene053103 | MS.gene59678 | 0.840121 | 1.05E-57 | -1.69E-46 |
MS.gene053104 | MS.gene59678 | 0.874375 | 7.09E-68 | -1.69E-46 |
MS.gene053107 | MS.gene59678 | 0.874101 | 8.79E-68 | -1.69E-46 |
MS.gene053203 | MS.gene59678 | 0.839294 | 1.73E-57 | -1.69E-46 |
MS.gene053207 | MS.gene59678 | 0.868023 | 8.89E-66 | -1.69E-46 |
MS.gene053213 | MS.gene59678 | 0.88811 | 7.89E-73 | -1.69E-46 |
MS.gene053286 | MS.gene59678 | 0.882862 | 7.30E-71 | -1.69E-46 |
MS.gene053322 | MS.gene59678 | 0.876744 | 1.09E-68 | -1.69E-46 |
MS.gene053436 | MS.gene59678 | 0.862662 | 4.32E-64 | -1.69E-46 |
MS.gene053449 | MS.gene59678 | 0.811215 | 7.83E-51 | -1.69E-46 |
MS.gene053479 | MS.gene59678 | 0.841094 | 5.85E-58 | -1.69E-46 |
MS.gene053574 | MS.gene59678 | 0.875808 | 2.30E-68 | -1.69E-46 |
MS.gene053579 | MS.gene59678 | 0.856054 | 4.17E-62 | -1.69E-46 |
MS.gene053626 | MS.gene59678 | 0.834479 | 2.93E-56 | -1.69E-46 |
MS.gene053632 | MS.gene59678 | 0.842846 | 2.01E-58 | -1.69E-46 |
MS.gene053813 | MS.gene59678 | 0.811599 | 6.46E-51 | -1.69E-46 |
MS.gene053824 | MS.gene59678 | 0.834711 | 2.56E-56 | -1.69E-46 |
MS.gene053916 | MS.gene59678 | 0.827086 | 1.90E-54 | -1.69E-46 |
MS.gene054003 | MS.gene59678 | 0.819677 | 1.02E-52 | -1.69E-46 |
MS.gene054374 | MS.gene59678 | 0.820792 | 5.69E-53 | -1.69E-46 |
MS.gene054408 | MS.gene59678 | 0.877874 | 4.43E-69 | -1.69E-46 |
MS.gene054595 | MS.gene59678 | 0.868774 | 5.09E-66 | -1.69E-46 |
MS.gene054600 | MS.gene59678 | 0.861578 | 9.30E-64 | -1.69E-46 |
MS.gene054642 | MS.gene59678 | 0.879004 | 1.77E-69 | -1.69E-46 |
MS.gene054802 | MS.gene59678 | 0.822001 | 2.99E-53 | -1.69E-46 |
MS.gene054803 | MS.gene59678 | 0.81667 | 4.91E-52 | -1.69E-46 |
MS.gene054804 | MS.gene59678 | 0.819597 | 1.07E-52 | -1.69E-46 |
MS.gene054927 | MS.gene59678 | 0.816284 | 5.99E-52 | -1.69E-46 |
MS.gene054954 | MS.gene59678 | 0.828355 | 9.41E-55 | -1.69E-46 |
MS.gene05505 | MS.gene59678 | 0.851597 | 8.00E-61 | -1.69E-46 |
MS.gene055154 | MS.gene59678 | -0.822168 | 2.74E-53 | -1.69E-46 |
MS.gene055206 | MS.gene59678 | 0.872265 | 3.63E-67 | -1.69E-46 |
MS.gene055212 | MS.gene59678 | 0.806957 | 6.39E-50 | -1.69E-46 |
MS.gene055224 | MS.gene59678 | 0.851662 | 7.67E-61 | -1.69E-46 |
MS.gene055289 | MS.gene59678 | 0.843306 | 1.52E-58 | -1.69E-46 |
MS.gene055362 | MS.gene59678 | 0.846783 | 1.75E-59 | -1.69E-46 |
MS.gene055412 | MS.gene59678 | 0.844765 | 6.17E-59 | -1.69E-46 |
MS.gene055499 | MS.gene59678 | 0.828093 | 1.09E-54 | -1.69E-46 |
MS.gene055502 | MS.gene59678 | 0.886847 | 2.39E-72 | -1.69E-46 |
MS.gene055577 | MS.gene59678 | 0.864309 | 1.33E-64 | -1.69E-46 |
MS.gene055636 | MS.gene59678 | 0.829597 | 4.71E-55 | -1.69E-46 |
MS.gene055638 | MS.gene59678 | 0.827744 | 1.32E-54 | -1.69E-46 |
MS.gene055647 | MS.gene59678 | 0.859489 | 3.99E-63 | -1.69E-46 |
MS.gene055722 | MS.gene59678 | 0.842235 | 2.93E-58 | -1.69E-46 |
MS.gene055748 | MS.gene59678 | 0.825897 | 3.65E-54 | -1.69E-46 |
MS.gene055750 | MS.gene59678 | 0.831988 | 1.22E-55 | -1.69E-46 |
MS.gene055751 | MS.gene59678 | 0.812506 | 4.10E-51 | -1.69E-46 |
MS.gene05592 | MS.gene59678 | 0.886928 | 2.23E-72 | -1.69E-46 |
MS.gene055941 | MS.gene59678 | 0.872081 | 4.18E-67 | -1.69E-46 |
MS.gene056040 | MS.gene59678 | 0.81353 | 2.44E-51 | -1.69E-46 |
MS.gene056083 | MS.gene59678 | 0.803729 | 3.03E-49 | -1.69E-46 |
MS.gene056166 | MS.gene59678 | 0.819603 | 1.07E-52 | -1.69E-46 |
MS.gene056374 | MS.gene59678 | 0.870042 | 1.97E-66 | -1.69E-46 |
MS.gene056407 | MS.gene59678 | 0.818756 | 1.66E-52 | -1.69E-46 |
MS.gene056422 | MS.gene59678 | 0.834042 | 3.77E-56 | -1.69E-46 |
MS.gene056446 | MS.gene59678 | 0.820933 | 5.28E-53 | -1.69E-46 |
MS.gene056448 | MS.gene59678 | 0.823921 | 1.07E-53 | -1.69E-46 |
MS.gene056504 | MS.gene59678 | 0.819483 | 1.13E-52 | -1.69E-46 |
MS.gene056510 | MS.gene59678 | 0.84673 | 1.81E-59 | -1.69E-46 |
MS.gene056511 | MS.gene59678 | 0.828729 | 7.65E-55 | -1.69E-46 |
MS.gene056549 | MS.gene59678 | 0.824652 | 7.19E-54 | -1.69E-46 |
MS.gene056610 | MS.gene59678 | 0.807773 | 4.29E-50 | -1.69E-46 |
MS.gene056657 | MS.gene59678 | 0.862992 | 3.42E-64 | -1.69E-46 |
MS.gene056692 | MS.gene59678 | 0.834991 | 2.18E-56 | -1.69E-46 |
MS.gene056897 | MS.gene59678 | 0.819492 | 1.13E-52 | -1.69E-46 |
MS.gene056947 | MS.gene59678 | 0.810215 | 1.29E-50 | -1.69E-46 |
MS.gene057011 | MS.gene59678 | 0.885526 | 7.54E-72 | -1.69E-46 |
MS.gene057076 | MS.gene59678 | 0.834335 | 3.18E-56 | -1.69E-46 |
MS.gene057086 | MS.gene59678 | 0.813677 | 2.27E-51 | -1.69E-46 |
MS.gene057124 | MS.gene59678 | 0.819705 | 1.01E-52 | -1.69E-46 |
MS.gene057129 | MS.gene59678 | 0.852206 | 5.38E-61 | -1.69E-46 |
MS.gene057146 | MS.gene59678 | 0.858363 | 8.67E-63 | -1.69E-46 |
MS.gene057285 | MS.gene59678 | 0.813173 | 2.93E-51 | -1.69E-46 |
MS.gene057331 | MS.gene59678 | 0.873993 | 9.56E-68 | -1.69E-46 |
MS.gene05735 | MS.gene59678 | 0.800168 | 1.64E-48 | -1.69E-46 |
MS.gene057416 | MS.gene59678 | 0.884239 | 2.27E-71 | -1.69E-46 |
MS.gene057658 | MS.gene59678 | 0.806848 | 6.74E-50 | -1.69E-46 |
MS.gene057831 | MS.gene59678 | 0.844485 | 7.35E-59 | -1.69E-46 |
MS.gene057856 | MS.gene59678 | 0.800509 | 1.39E-48 | -1.69E-46 |
MS.gene05787 | MS.gene59678 | 0.820759 | 5.79E-53 | -1.69E-46 |
MS.gene057926 | MS.gene59678 | 0.818036 | 2.42E-52 | -1.69E-46 |
MS.gene058006 | MS.gene59678 | 0.847604 | 1.04E-59 | -1.69E-46 |
MS.gene058019 | MS.gene59678 | 0.847506 | 1.11E-59 | -1.69E-46 |
MS.gene058130 | MS.gene59678 | 0.86766 | 1.16E-65 | -1.69E-46 |
MS.gene058293 | MS.gene59678 | 0.821355 | 4.22E-53 | -1.69E-46 |
MS.gene058323 | MS.gene59678 | 0.869282 | 3.48E-66 | -1.69E-46 |
MS.gene058338 | MS.gene59678 | 0.823085 | 1.67E-53 | -1.69E-46 |
MS.gene05837 | MS.gene59678 | 0.898674 | 4.21E-77 | -1.69E-46 |
MS.gene058419 | MS.gene59678 | 0.872246 | 3.69E-67 | -1.69E-46 |
MS.gene058544 | MS.gene59678 | 0.869975 | 2.07E-66 | -1.69E-46 |
MS.gene058660 | MS.gene59678 | 0.809883 | 1.52E-50 | -1.69E-46 |
MS.gene058773 | MS.gene59678 | 0.864363 | 1.28E-64 | -1.69E-46 |
MS.gene058838 | MS.gene59678 | 0.828609 | 8.17E-55 | -1.69E-46 |
MS.gene05883 | MS.gene59678 | 0.843519 | 1.33E-58 | -1.69E-46 |
MS.gene058840 | MS.gene59678 | -0.801848 | 7.42E-49 | -1.69E-46 |
MS.gene059022 | MS.gene59678 | 0.831147 | 1.97E-55 | -1.69E-46 |
MS.gene059023 | MS.gene59678 | 0.856289 | 3.56E-62 | -1.69E-46 |
MS.gene059029 | MS.gene59678 | 0.838225 | 3.26E-57 | -1.69E-46 |
MS.gene05913 | MS.gene59678 | 0.807773 | 4.29E-50 | -1.69E-46 |
MS.gene059305 | MS.gene59678 | 0.82427 | 8.84E-54 | -1.69E-46 |
MS.gene05934 | MS.gene59678 | 0.861958 | 7.11E-64 | -1.69E-46 |
MS.gene059367 | MS.gene59678 | 0.835293 | 1.83E-56 | -1.69E-46 |
MS.gene059368 | MS.gene59678 | 0.830155 | 3.44E-55 | -1.69E-46 |
MS.gene059536 | MS.gene59678 | 0.860287 | 2.29E-63 | -1.69E-46 |
MS.gene059676 | MS.gene59678 | 0.809308 | 2.02E-50 | -1.69E-46 |
MS.gene059677 | MS.gene59678 | 0.833939 | 4.00E-56 | -1.69E-46 |
MS.gene059688 | MS.gene59678 | 0.819678 | 1.02E-52 | -1.69E-46 |
MS.gene059718 | MS.gene59678 | 0.865417 | 6.00E-65 | -1.69E-46 |
MS.gene059756 | MS.gene59678 | 0.818976 | 1.48E-52 | -1.69E-46 |
MS.gene059801 | MS.gene59678 | 0.826775 | 2.25E-54 | -1.69E-46 |
MS.gene059865 | MS.gene59678 | 0.817587 | 3.05E-52 | -1.69E-46 |
MS.gene059902 | MS.gene59678 | 0.831845 | 1.33E-55 | -1.69E-46 |
MS.gene059960 | MS.gene59678 | 0.8708 | 1.11E-66 | -1.69E-46 |
MS.gene060193 | MS.gene59678 | 0.825692 | 4.08E-54 | -1.69E-46 |
MS.gene060403 | MS.gene59678 | 0.812524 | 4.06E-51 | -1.69E-46 |
MS.gene060482 | MS.gene59678 | 0.831987 | 1.22E-55 | -1.69E-46 |
MS.gene060762 | MS.gene59678 | 0.832521 | 9.02E-56 | -1.69E-46 |
MS.gene06077 | MS.gene59678 | 0.853661 | 2.06E-61 | -1.69E-46 |
MS.gene060804 | MS.gene59678 | 0.859759 | 3.31E-63 | -1.69E-46 |
MS.gene060818 | MS.gene59678 | 0.836948 | 6.94E-57 | -1.69E-46 |
MS.gene060835 | MS.gene59678 | 0.846323 | 2.33E-59 | -1.69E-46 |
MS.gene060837 | MS.gene59678 | 0.843977 | 1.01E-58 | -1.69E-46 |
MS.gene06092 | MS.gene59678 | 0.915283 | 7.07E-85 | -1.69E-46 |
MS.gene060982 | MS.gene59678 | 0.828716 | 7.70E-55 | -1.69E-46 |
MS.gene061041 | MS.gene59678 | 0.824301 | 8.69E-54 | -1.69E-46 |
MS.gene061051 | MS.gene59678 | -0.801887 | 7.28E-49 | -1.69E-46 |
MS.gene061134 | MS.gene59678 | 0.834774 | 2.47E-56 | -1.69E-46 |
MS.gene061150 | MS.gene59678 | 0.860646 | 1.79E-63 | -1.69E-46 |
MS.gene061171 | MS.gene59678 | 0.805104 | 1.57E-49 | -1.69E-46 |
MS.gene061200 | MS.gene59678 | 0.876635 | 1.19E-68 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59678.t1 | MTR_5g054910 | 85.630 | 341 | 29 | 5 | 1 | 324 | 1 | 338 | 0.0 | 572 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59678.t1 | AT3G25805 | 63.082 | 279 | 88 | 5 | 55 | 324 | 60 | 332 | 3.57e-121 | 352 |
Find 82 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTCCTCTTGTTGGACTTAT+TGG | 0.103256 | 5.4:-43357150 | MS.gene59678:CDS |
TGTGCCGGTTGTTGGCTTAA+TGG | 0.264612 | 5.4:-43356893 | MS.gene59678:CDS |
GGTCGAATGGATGCAAATTT+TGG | 0.266469 | 5.4:-43357087 | MS.gene59678:CDS |
GTTACGATCAATAATATTAA+AGG | 0.280514 | 5.4:-43359633 | MS.gene59678:CDS |
CTCTTGTTGGACTTATTGGT+GGG | 0.290504 | 5.4:-43357146 | MS.gene59678:CDS |
AGGGGTCTCTTGACGTACTA+TGG | 0.291879 | 5.4:-43357969 | MS.gene59678:CDS |
CCCCAAAGTTATACCTCTTT+AGG | 0.301184 | 5.4:+43356850 | None:intergenic |
TGAGCACAAGTGGGTTCTTC+TGG | 0.308044 | 5.4:+43360650 | None:intergenic |
AAGAGGGAGATGAGAATCTA+AGG | 0.321686 | 5.4:-43360587 | MS.gene59678:CDS |
TGCAGAAGAGAGTGAATTGA+TGG | 0.323703 | 5.4:+43360695 | None:intergenic |
GGCTGGCTTACGGGTTCATA+TGG | 0.331863 | 5.4:-43357014 | MS.gene59678:CDS |
ACAGAATGTTCAGCAAAATA+AGG | 0.336442 | 5.4:-43356941 | MS.gene59678:CDS |
AATGGCTTATCTTCTTTGCT+TGG | 0.344831 | 5.4:-43356875 | MS.gene59678:CDS |
CAAGTGGGTTCTTCTGGAAT+TGG | 0.345819 | 5.4:+43360656 | None:intergenic |
CTTAGATATGTGCCGGTTGT+TGG | 0.346524 | 5.4:-43356901 | MS.gene59678:CDS |
GTGTTCCCTCCATTCACCTT+TGG | 0.355494 | 5.4:-43360772 | MS.gene59678:CDS |
ATTCTCATCTCCCTCTTTCT+CGG | 0.359762 | 5.4:+43360593 | None:intergenic |
GAGTACTTGGTTGGTTATCT+TGG | 0.361713 | 5.4:-43357045 | MS.gene59678:CDS |
TACGATCTGTGAACAGTAAA+GGG | 0.363648 | 5.4:+43358007 | None:intergenic |
GTTCAGAAAGGCTGGCTTAC+GGG | 0.364495 | 5.4:-43357023 | MS.gene59678:CDS |
GGACTATTCAACTTTGTGAT+TGG | 0.372455 | 5.4:-43358048 | MS.gene59678:CDS |
TTGATGGAGCTGAAAGGTTT+TGG | 0.375437 | 5.4:+43360711 | None:intergenic |
ACACTTACAGGATGAAGAAC+TGG | 0.392869 | 5.4:+43358169 | None:intergenic |
TATTCAACTTTGTGATTGGA+TGG | 0.402697 | 5.4:-43358044 | MS.gene59678:CDS |
TTCATTCGGATAGCCATGTA+TGG | 0.404808 | 5.4:+43357237 | None:intergenic |
ACAAAGGATGCTCCTCTTGT+TGG | 0.422169 | 5.4:-43357159 | MS.gene59678:CDS |
AGTTCTCCAAAGTGGGTTGT+GGG | 0.427357 | 5.4:-43360562 | MS.gene59678:CDS |
CCTCTTGTTGGACTTATTGG+TGG | 0.429183 | 5.4:-43357147 | MS.gene59678:CDS |
CATCGTCGGCATTATTCATT+CGG | 0.431641 | 5.4:+43357223 | None:intergenic |
ATCTCCCTCTTTCTCGGATG+TGG | 0.435940 | 5.4:+43360599 | None:intergenic |
AGAGTACCTACAGGAGCATA+AGG | 0.447036 | 5.4:+43360501 | None:intergenic |
TTATCTTGGTTCAGAAAGGC+TGG | 0.452225 | 5.4:-43357031 | MS.gene59678:CDS |
GGTTCAGAAAGGCTGGCTTA+CGG | 0.454929 | 5.4:-43357024 | MS.gene59678:CDS |
GAGTTCTCCAAAGTGGGTTG+TGG | 0.461457 | 5.4:-43360563 | MS.gene59678:CDS |
TTGCTTCCTTATGCTCCTGT+AGG | 0.467828 | 5.4:-43360507 | MS.gene59678:intron |
TTACGATCAATAATATTAAA+GGG | 0.471299 | 5.4:-43359632 | MS.gene59678:CDS |
AGAACCCACTTGTGCTCAGC+AGG | 0.474396 | 5.4:-43360645 | MS.gene59678:CDS |
CAGCACCCCACAACCCACTT+TGG | 0.476302 | 5.4:+43360556 | None:intergenic |
ATGTCTTATATCTCTATTGT+GGG | 0.479082 | 5.4:-43357118 | MS.gene59678:CDS |
AGTAGACAGATGGGAGTACT+TGG | 0.483792 | 5.4:-43357058 | MS.gene59678:CDS |
GGGGTCTCTTGACGTACTAT+GGG | 0.484452 | 5.4:-43357968 | MS.gene59678:CDS |
GTTAGCCACATCCGAGAAAG+AGG | 0.484606 | 5.4:-43360604 | MS.gene59678:CDS |
TTACGATCTGTGAACAGTAA+AGG | 0.489239 | 5.4:+43358006 | None:intergenic |
TGGAGGGAACACAGCAATGT+TGG | 0.495986 | 5.4:+43360783 | None:intergenic |
TCTTTGCTTGGAGCCTAAAG+AGG | 0.497337 | 5.4:-43356863 | MS.gene59678:CDS |
TTGGTTATCTTGGTTCAGAA+AGG | 0.499395 | 5.4:-43357035 | MS.gene59678:CDS |
TAAGCCATTAAGCCAACAAC+CGG | 0.500372 | 5.4:+43356889 | None:intergenic |
CACTTACAGGATGAAGAACT+GGG | 0.507713 | 5.4:+43358170 | None:intergenic |
CTTGTTGGACTTATTGGTGG+GGG | 0.508080 | 5.4:-43357144 | MS.gene59678:CDS |
TATGTCTTATATCTCTATTG+TGG | 0.510135 | 5.4:-43357119 | MS.gene59678:CDS |
GTCGACCTGCTGAGCACAAG+TGG | 0.510163 | 5.4:+43360640 | None:intergenic |
TTCTTGCTTCAGATGTCAGA+AGG | 0.519583 | 5.4:-43358069 | MS.gene59678:intron |
TTGGTGGCATAGTAGACAGA+TGG | 0.519695 | 5.4:-43357068 | MS.gene59678:CDS |
AAGTGGGTTGTGGGGTGCTG+AGG | 0.532929 | 5.4:-43360553 | MS.gene59678:CDS |
TCTTGTTGGACTTATTGGTG+GGG | 0.552934 | 5.4:-43357145 | MS.gene59678:CDS |
CGTAAGAGAGATAGATACAA+GGG | 0.553150 | 5.4:-43357988 | MS.gene59678:CDS |
GCTGGCTTACGGGTTCATAT+GGG | 0.560206 | 5.4:-43357013 | MS.gene59678:CDS |
GATTGGAGCATTGTCATCGT+CGG | 0.563202 | 5.4:+43357209 | None:intergenic |
GACAGATGGGAGTACTTGGT+TGG | 0.563907 | 5.4:-43357054 | MS.gene59678:CDS |
AGTGAATTGATGGAGCTGAA+AGG | 0.567019 | 5.4:+43360705 | None:intergenic |
GAAGTATCTTAGATATGTGC+CGG | 0.572628 | 5.4:-43356908 | MS.gene59678:CDS |
TACGAAACATACTATTTGTG+AGG | 0.575355 | 5.4:+43357932 | None:intergenic |
CTCGGATGTGGCTAACTCTG+TGG | 0.577757 | 5.4:+43360611 | None:intergenic |
ATTGGGTTCTGTTATGACAA+AGG | 0.580161 | 5.4:-43357175 | MS.gene59678:CDS |
CATCACTCTATCATCTCCAA+TGG | 0.582082 | 5.4:-43360740 | MS.gene59678:CDS |
TTGAGGCCAAAGGTGAATGG+AGG | 0.584183 | 5.4:+43360766 | None:intergenic |
TGGTGGCATAGTAGACAGAT+GGG | 0.587147 | 5.4:-43357067 | MS.gene59678:CDS |
TCATTCGGATAGCCATGTAT+GGG | 0.588241 | 5.4:+43357238 | None:intergenic |
TCGTAAGAGAGATAGATACA+AGG | 0.594101 | 5.4:-43357989 | MS.gene59678:CDS |
TAAGGAGAGTTCTCCAAAGT+GGG | 0.595163 | 5.4:-43360569 | MS.gene59678:CDS |
TGAGGCCAAAGGTGAATGGA+GGG | 0.597385 | 5.4:+43360767 | None:intergenic |
ATATTAAAGGGAGAAACCTA+AGG | 0.599830 | 5.4:-43359620 | MS.gene59678:intron |
GTTCTCCAAAGTGGGTTGTG+GGG | 0.601465 | 5.4:-43360561 | MS.gene59678:CDS |
CTAAGGAGAGTTCTCCAAAG+TGG | 0.619039 | 5.4:-43360570 | MS.gene59678:CDS |
TTAGCCACATCCGAGAAAGA+GGG | 0.621133 | 5.4:-43360603 | MS.gene59678:CDS |
CCACCAATAAGTCCAACAAG+AGG | 0.628509 | 5.4:+43357147 | None:intergenic |
TCGACCTGCTGAGCACAAGT+GGG | 0.656575 | 5.4:+43360641 | None:intergenic |
ACGATCTGTGAACAGTAAAG+GGG | 0.671682 | 5.4:+43358008 | None:intergenic |
GGGTCTCTTGACGTACTATG+GGG | 0.700610 | 5.4:-43357967 | MS.gene59678:CDS |
GTAAGAGAGATAGATACAAG+GGG | 0.727954 | 5.4:-43357987 | MS.gene59678:CDS |
AGGTTGTCACCAATCAACCA+AGG | 0.739039 | 5.4:+43356964 | None:intergenic |
ACTTACAGGATGAAGAACTG+GGG | 0.768615 | 5.4:+43358171 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATTAAAAAAGAAGAAA+TGG | - | chr5.4:43359075-43359094 | MS.gene59678:intron | 10.0% |
!! | AAATTTCTTCATTAACTAAA+AGG | + | chr5.4:43357849-43357868 | None:intergenic | 15.0% |
!! | ATTGACAAATATGAAAATAA+TGG | + | chr5.4:43358667-43358686 | None:intergenic | 15.0% |
!! | GTTAAAGGATTATATTAATT+GGG | + | chr5.4:43359325-43359344 | None:intergenic | 15.0% |
!! | TTACGATCAATAATATTAAA+GGG | - | chr5.4:43358030-43358049 | MS.gene59678:CDS | 15.0% |
!!! | TGATTTAATAAAGTATTTAG+AGG | - | chr5.4:43358124-43358143 | MS.gene59678:intron | 15.0% |
!!! | TTGTATTTTCTTAAGTAAAA+AGG | - | chr5.4:43357325-43357344 | MS.gene59678:intron | 15.0% |
!! | ACAACAAATTTCATTTGAAA+TGG | + | chr5.4:43360056-43360075 | None:intergenic | 20.0% |
!! | CCAATCAAAAATTCAAAATT+GGG | - | chr5.4:43360470-43360489 | MS.gene59678:intron | 20.0% |
!! | CGTATTATTATAAATTCACA+AGG | + | chr5.4:43358994-43359013 | None:intergenic | 20.0% |
!! | CGTTAAAGGATTATATTAAT+TGG | + | chr5.4:43359326-43359345 | None:intergenic | 20.0% |
!! | GTTACGATCAATAATATTAA+AGG | - | chr5.4:43358029-43358048 | MS.gene59678:CDS | 20.0% |
!! | TAATCTGTTAATGAGATAAA+TGG | - | chr5.4:43358174-43358193 | MS.gene59678:intron | 20.0% |
!! | TCCAATCAAAAATTCAAAAT+TGG | - | chr5.4:43360469-43360488 | MS.gene59678:intron | 20.0% |
!!! | ATTTTTTATCCTCTTTCTTT+TGG | - | chr5.4:43358712-43358731 | MS.gene59678:intron | 20.0% |
!!! | CAACAAATTTCATTTGAAAT+GGG | + | chr5.4:43360055-43360074 | None:intergenic | 20.0% |
!!! | CAACTTAAACATTATTGATT+AGG | + | chr5.4:43358567-43358586 | None:intergenic | 20.0% |
!!! | GCATAAAAAAGTACTTAATA+AGG | + | chr5.4:43357505-43357524 | None:intergenic | 20.0% |
!!! | TATGAAAATAATGGAAGAAA+CGG | + | chr5.4:43358658-43358677 | None:intergenic | 20.0% |
!!! | TGATTTTTTTGAGAATTATG+AGG | - | chr5.4:43359364-43359383 | MS.gene59678:intron | 20.0% |
!!! | TTTTTTCTTGAATTTTGACA+GGG | - | chr5.4:43358424-43358443 | MS.gene59678:intron | 20.0% |
!!! | TTTTTTTCTTGAATTTTGAC+AGG | - | chr5.4:43358423-43358442 | MS.gene59678:intron | 20.0% |
! | AAATTGTTGCAAGAGATAAA+GGG | - | chr5.4:43358151-43358170 | MS.gene59678:intron | 25.0% |
! | AAGAAATGGAATTTAGATAG+AGG | - | chr5.4:43359089-43359108 | MS.gene59678:intron | 25.0% |
! | AAGTTTGATAAGTACGTTAA+AGG | + | chr5.4:43359340-43359359 | None:intergenic | 25.0% |
! | AGAAATATACTCTTCTATGT+AGG | + | chr5.4:43359787-43359806 | None:intergenic | 25.0% |
! | AGAAATGGAATTTAGATAGA+GGG | - | chr5.4:43359090-43359109 | MS.gene59678:intron | 25.0% |
! | AGAAGACGAAAAAAAATTAC+AGG | - | chr5.4:43357440-43357459 | MS.gene59678:intron | 25.0% |
! | AGTCTATACAAACAGAAATA+AGG | - | chr5.4:43359122-43359141 | MS.gene59678:intron | 25.0% |
! | ATCCTAAAAAAGGAGTAATA+AGG | - | chr5.4:43358097-43358116 | MS.gene59678:intron | 25.0% |
! | ATGTCTTATATCTCTATTGT+GGG | - | chr5.4:43360544-43360563 | MS.gene59678:CDS | 25.0% |
! | GAAGACGAAAAAAAATTACA+GGG | - | chr5.4:43357441-43357460 | MS.gene59678:intron | 25.0% |
! | GAGGATAAAAAATAGAAACA+TGG | + | chr5.4:43358705-43358724 | None:intergenic | 25.0% |
! | GGTTATCACATATACAAATA+GGG | + | chr5.4:43359304-43359323 | None:intergenic | 25.0% |
! | TATGTCTTATATCTCTATTG+TGG | - | chr5.4:43360543-43360562 | MS.gene59678:CDS | 25.0% |
! | TCAAAGCTATGCAAATTTAT+CGG | + | chr5.4:43358390-43358409 | None:intergenic | 25.0% |
! | TGAATGCAACAATTATCATA+TGG | + | chr5.4:43358276-43358295 | None:intergenic | 25.0% |
! | TGTACAAGTAACATATGATT+TGG | - | chr5.4:43359519-43359538 | MS.gene59678:intron | 25.0% |
! | TTCTTAATTGCTTGAGAAAT+TGG | - | chr5.4:43358961-43358980 | MS.gene59678:intron | 25.0% |
!! | CCCAATTTTGAATTTTTGAT+TGG | + | chr5.4:43360473-43360492 | None:intergenic | 25.0% |
!! | TCTTTTGTAAACTAATCTCT+CGG | - | chr5.4:43357300-43357319 | MS.gene59678:intron | 25.0% |
!!! | AACCTTATTACTCCTTTTTT+AGG | + | chr5.4:43358102-43358121 | None:intergenic | 25.0% |
!!! | ATTATACTGATTTGTAGTTC+TGG | - | chr5.4:43358872-43358891 | MS.gene59678:intron | 25.0% |
!!! | GTATATTTCTAGCATCAAAA+AGG | - | chr5.4:43359797-43359816 | MS.gene59678:intron | 25.0% |
!!! | TAACAGTGTTGTTTTTGATT+CGG | + | chr5.4:43358013-43358032 | None:intergenic | 25.0% |
!!! | TACGTAGTAATGTTTTTATG+AGG | + | chr5.4:43357905-43357924 | None:intergenic | 25.0% |
!!! | TTCAATGATTTCTGTTTTGA+CGG | - | chr5.4:43359433-43359452 | MS.gene59678:intron | 25.0% |
!!! | TTGTTATCTTTTGTTTGTGT+TGG | - | chr5.4:43357215-43357234 | MS.gene59678:CDS | 25.0% |
!!! | TTTTTGAGTTATTGTCAAGT+TGG | + | chr5.4:43357637-43357656 | None:intergenic | 25.0% |
AAAGCTATGCAAATTTATCG+GGG | + | chr5.4:43358388-43358407 | None:intergenic | 30.0% | |
AAGAAAAATTGTCCAACATC+AGG | + | chr5.4:43359578-43359597 | None:intergenic | 30.0% | |
AAGAATCCTATCAAACAAAC+CGG | + | chr5.4:43358779-43358798 | None:intergenic | 30.0% | |
AAGTGTTATGATAGAAGAGT+AGG | - | chr5.4:43358815-43358834 | MS.gene59678:intron | 30.0% | |
ACACCTAAACATCCTAAAAA+AGG | - | chr5.4:43358087-43358106 | MS.gene59678:intron | 30.0% | |
ACAGAATGTTCAGCAAAATA+AGG | - | chr5.4:43360721-43360740 | MS.gene59678:CDS | 30.0% | |
AGAAAAATTGTCCAACATCA+GGG | + | chr5.4:43359577-43359596 | None:intergenic | 30.0% | |
AGACTCAATTTAGTAAACAG+AGG | - | chr5.4:43358895-43358914 | MS.gene59678:intron | 30.0% | |
AGGGAAATTGTTTCATCAAA+TGG | + | chr5.4:43359558-43359577 | None:intergenic | 30.0% | |
AGTACATTGCTTGAGAATTA+AGG | - | chr5.4:43357777-43357796 | MS.gene59678:intron | 30.0% | |
ATATTAAAGGGAGAAACCTA+AGG | - | chr5.4:43358042-43358061 | MS.gene59678:CDS | 30.0% | |
ATGATAGAAGAGTAGGATAA+AGG | - | chr5.4:43358822-43358841 | MS.gene59678:intron | 30.0% | |
ATGTTGTCAATTGAGAATCA+CGG | + | chr5.4:43360334-43360353 | None:intergenic | 30.0% | |
ATTTACACACAAGAAACAAC+TGG | + | chr5.4:43357274-43357293 | None:intergenic | 30.0% | |
CAAAGCTATGCAAATTTATC+GGG | + | chr5.4:43358389-43358408 | None:intergenic | 30.0% | |
CATCATAGATTGTAGTATAG+CGG | - | chr5.4:43360287-43360306 | MS.gene59678:intron | 30.0% | |
CTTGACAATAACTCAAAAAG+TGG | - | chr5.4:43357638-43357657 | MS.gene59678:intron | 30.0% | |
GAAATGGGATTATGAAGAAA+AGG | + | chr5.4:43360040-43360059 | None:intergenic | 30.0% | |
GAAATTGTTGCAAGAGATAA+AGG | - | chr5.4:43358150-43358169 | MS.gene59678:intron | 30.0% | |
GACTCAATTTAGTAAACAGA+GGG | - | chr5.4:43358896-43358915 | MS.gene59678:intron | 30.0% | |
GATTAGGTGTAAAGAGAAAT+AGG | + | chr5.4:43358551-43358570 | None:intergenic | 30.0% | |
GGGTTATCACATATACAAAT+AGG | + | chr5.4:43359305-43359324 | None:intergenic | 30.0% | |
TACGAAACATACTATTTGTG+AGG | + | chr5.4:43359733-43359752 | None:intergenic | 30.0% | |
TATACAAATAGGGATTTAGC+TGG | + | chr5.4:43359294-43359313 | None:intergenic | 30.0% | |
TATACTACAATCTATGATGC+AGG | + | chr5.4:43360286-43360305 | None:intergenic | 30.0% | |
TATTCAACTTTGTGATTGGA+TGG | - | chr5.4:43359618-43359637 | MS.gene59678:intron | 30.0% | |
TCTGCTTTCTCAAGAAATTA+AGG | + | chr5.4:43359049-43359068 | None:intergenic | 30.0% | |
TGATAGAAGAGTAGGATAAA+GGG | - | chr5.4:43358823-43358842 | MS.gene59678:intron | 30.0% | |
TGGCAACACAGAAAATATAA+AGG | + | chr5.4:43359861-43359880 | None:intergenic | 30.0% | |
! | ACCAAGTTCAGTCTTTTATT+TGG | + | chr5.4:43358942-43358961 | None:intergenic | 30.0% |
! | ATGATAGAGTGATGATTTTG+AGG | + | chr5.4:43356916-43356935 | None:intergenic | 30.0% |
! | CTTTTGTAAACTAATCTCTC+GGG | - | chr5.4:43357301-43357320 | MS.gene59678:intron | 30.0% |
! | GTTTTTGTGAAGCAGTATAA+CGG | + | chr5.4:43357615-43357634 | None:intergenic | 30.0% |
! | TATTTTGCTGAACATTCTGT+AGG | + | chr5.4:43360721-43360740 | None:intergenic | 30.0% |
!! | AAAAAAGAAAGAGTACCTAC+AGG | + | chr5.4:43357173-43357192 | None:intergenic | 30.0% |
!! | CCAAGTTCAGTCTTTTATTT+GGG | + | chr5.4:43358941-43358960 | None:intergenic | 30.0% |
!! | GTCTTTTATTTGGGTAATTC+AGG | + | chr5.4:43358932-43358951 | None:intergenic | 30.0% |
!! | TCATAGATTAATTTGTTCCC+TGG | + | chr5.4:43358320-43358339 | None:intergenic | 30.0% |
!! | TCTTTTGTTTGTGTTGGAAT+TGG | - | chr5.4:43357221-43357240 | MS.gene59678:CDS | 30.0% |
!! | TGCAAAGTATTGTCAAATAG+CGG | - | chr5.4:43359946-43359965 | MS.gene59678:intron | 30.0% |
!! | TTTATACGATTTTTCAGCCT+TGG | - | chr5.4:43360681-43360700 | MS.gene59678:CDS | 30.0% |
!!! | ACTCCTTTTTTAGGATGTTT+AGG | + | chr5.4:43358093-43358112 | None:intergenic | 30.0% |
!!! | CGAACTTGATGTTTTGAAAA+AGG | - | chr5.4:43358352-43358371 | MS.gene59678:intron | 30.0% |
!!! | TCTCAAGCAATGTACTTTTT+TGG | + | chr5.4:43357773-43357792 | None:intergenic | 30.0% |
AAAATACCATATCTCGTACC+CGG | - | chr5.4:43360253-43360272 | MS.gene59678:intron | 35.0% | |
AAACTTGTGACAGTATAGAG+AGG | - | chr5.4:43358240-43358259 | MS.gene59678:intron | 35.0% | |
AACATACCAAGATTCACGAA+TGG | + | chr5.4:43358526-43358545 | None:intergenic | 35.0% | |
AACCTCATAGTTCATGGAAA+CGG | + | chr5.4:43357945-43357964 | None:intergenic | 35.0% | |
AATAGGAGGGATAAAAAGTC+GGG | - | chr5.4:43357580-43357599 | MS.gene59678:intron | 35.0% | |
AATGGCTTATCTTCTTTGCT+TGG | - | chr5.4:43360787-43360806 | MS.gene59678:CDS | 35.0% | |
AATTACAGGGATGTGAAAAG+TGG | - | chr5.4:43357454-43357473 | MS.gene59678:intron | 35.0% | |
AGAATCCTATCAAACAAACC+GGG | + | chr5.4:43358778-43358797 | None:intergenic | 35.0% | |
ATACCATTATGTAATTGGCC+AGG | - | chr5.4:43358299-43358318 | MS.gene59678:intron | 35.0% | |
ATTGGGTTCTGTTATGACAA+AGG | - | chr5.4:43360487-43360506 | MS.gene59678:intron | 35.0% | |
CAGCCATACCATTATGTAAT+TGG | - | chr5.4:43358294-43358313 | MS.gene59678:intron | 35.0% | |
CCCAAATAAAAGACTGAACT+TGG | - | chr5.4:43358938-43358957 | MS.gene59678:intron | 35.0% | |
CGTAAGAGAGATAGATACAA+GGG | - | chr5.4:43359674-43359693 | MS.gene59678:intron | 35.0% | |
CTCTGATGCATTTGTGATAA+AGG | - | chr5.4:43357975-43357994 | MS.gene59678:CDS | 35.0% | |
CTTCTCCATTTAAGGAGAAT+AGG | - | chr5.4:43357563-43357582 | MS.gene59678:intron | 35.0% | |
CTTTATCACAAATGCATCAG+AGG | + | chr5.4:43357977-43357996 | None:intergenic | 35.0% | |
GAATAGGAGGGATAAAAAGT+CGG | - | chr5.4:43357579-43357598 | MS.gene59678:intron | 35.0% | |
GATAGAAGAGTAGGATAAAG+GGG | - | chr5.4:43358824-43358843 | MS.gene59678:intron | 35.0% | |
GGACTATTCAACTTTGTGAT+TGG | - | chr5.4:43359614-43359633 | MS.gene59678:intron | 35.0% | |
GTAAGAGAGATAGATACAAG+GGG | - | chr5.4:43359675-43359694 | MS.gene59678:intron | 35.0% | |
TACCATTATGTAATTGGCCA+GGG | - | chr5.4:43358300-43358319 | MS.gene59678:intron | 35.0% | |
TACGATCTGTGAACAGTAAA+GGG | + | chr5.4:43359658-43359677 | None:intergenic | 35.0% | |
TACTCTAACCTCATAGTTCA+TGG | + | chr5.4:43357951-43357970 | None:intergenic | 35.0% | |
TCAAAACATCAAGTTCGTCA+AGG | + | chr5.4:43358349-43358368 | None:intergenic | 35.0% | |
TCCATTTAAGGAGAATAGGA+GGG | - | chr5.4:43357567-43357586 | MS.gene59678:intron | 35.0% | |
TCGTAAGAGAGATAGATACA+AGG | - | chr5.4:43359673-43359692 | MS.gene59678:intron | 35.0% | |
TGAAACAATTTCCCTGATGT+TGG | - | chr5.4:43359563-43359582 | MS.gene59678:intron | 35.0% | |
TGCTTTAATCGTACCTTTAC+AGG | + | chr5.4:43358852-43358871 | None:intergenic | 35.0% | |
TGGCCAATTACATAATGGTA+TGG | + | chr5.4:43358300-43358319 | None:intergenic | 35.0% | |
TTACGATCTGTGAACAGTAA+AGG | + | chr5.4:43359659-43359678 | None:intergenic | 35.0% | |
TTGGTTATCTTGGTTCAGAA+AGG | - | chr5.4:43360627-43360646 | MS.gene59678:CDS | 35.0% | |
! | AGCATTTTTGATCCCATACA+TGG | - | chr5.4:43360412-43360431 | MS.gene59678:intron | 35.0% |
! | CTGAGGTTGTCTATATTTTG+TGG | - | chr5.4:43357126-43357145 | MS.gene59678:CDS | 35.0% |
! | GAAGTATCTTAGATATGTGC+CGG | - | chr5.4:43360754-43360773 | MS.gene59678:CDS | 35.0% |
! | GTATTTTCGCCAAAAGAAAG+AGG | + | chr5.4:43358724-43358743 | None:intergenic | 35.0% |
!! | ATTTTTCAGCCTTGGTTGAT+TGG | - | chr5.4:43360689-43360708 | MS.gene59678:CDS | 35.0% |
!! | GTATTTTAGAAATGTACCCC+CGG | - | chr5.4:43358757-43358776 | MS.gene59678:intron | 35.0% |
!! | TAACTAAAAGGTGCCTTAGT+GGG | + | chr5.4:43357837-43357856 | None:intergenic | 35.0% |
!! | TTAACTAAAAGGTGCCTTAG+TGG | + | chr5.4:43357838-43357857 | None:intergenic | 35.0% |
!!! | GATTTCTGTTTTGACGGTTT+TGG | - | chr5.4:43359439-43359458 | MS.gene59678:intron | 35.0% |
AACCGTTTCCATGAACTATG+AGG | - | chr5.4:43357940-43357959 | MS.gene59678:intron | 40.0% | |
AAGAGGGAGATGAGAATCTA+AGG | - | chr5.4:43357075-43357094 | MS.gene59678:CDS | 40.0% | |
AATCCTATCAAACAAACCGG+GGG | + | chr5.4:43358776-43358795 | None:intergenic | 40.0% | |
ACACTTACAGGATGAAGAAC+TGG | + | chr5.4:43359496-43359515 | None:intergenic | 40.0% | |
ACAGCGATGCTATAGCATAA+CGG | - | chr5.4:43359882-43359901 | MS.gene59678:intron | 40.0% | |
ACGATCTGTGAACAGTAAAG+GGG | + | chr5.4:43359657-43359676 | None:intergenic | 40.0% | |
ACTTACAGGATGAAGAACTG+GGG | + | chr5.4:43359494-43359513 | None:intergenic | 40.0% | |
ACTTGTACAGTGACACTTAC+AGG | + | chr5.4:43359508-43359527 | None:intergenic | 40.0% | |
AGTGAATTGATGGAGCTGAA+AGG | + | chr5.4:43356960-43356979 | None:intergenic | 40.0% | |
ATCTTGCCATTCGTGAATCT+TGG | - | chr5.4:43358517-43358536 | MS.gene59678:intron | 40.0% | |
ATTCTCATCTCCCTCTTTCT+CGG | + | chr5.4:43357072-43357091 | None:intergenic | 40.0% | |
CAAAAAGTGGTGCATAGTTG+AGG | - | chr5.4:43357651-43357670 | MS.gene59678:intron | 40.0% | |
CACTTACAGGATGAAGAACT+GGG | + | chr5.4:43359495-43359514 | None:intergenic | 40.0% | |
CATCACTCTATCATCTCCAA+TGG | - | chr5.4:43356922-43356941 | MS.gene59678:CDS | 40.0% | |
CATCGTCGGCATTATTCATT+CGG | + | chr5.4:43360442-43360461 | None:intergenic | 40.0% | |
CATTACTACGTACAGACTTG+AGG | - | chr5.4:43357913-43357932 | MS.gene59678:intron | 40.0% | |
CTATGATGCAGGTACAATAC+CGG | + | chr5.4:43360275-43360294 | None:intergenic | 40.0% | |
CTCCATTTAAGGAGAATAGG+AGG | - | chr5.4:43357566-43357585 | MS.gene59678:intron | 40.0% | |
CTCTTGTTGGACTTATTGGT+GGG | - | chr5.4:43360516-43360535 | MS.gene59678:CDS | 40.0% | |
CTGGAATTGGAAAAAACGAG+TGG | + | chr5.4:43356996-43357015 | None:intergenic | 40.0% | |
GAATCCTATCAAACAAACCG+GGG | + | chr5.4:43358777-43358796 | None:intergenic | 40.0% | |
GAGGAATATATACACTGCTC+TGG | - | chr5.4:43359383-43359402 | MS.gene59678:intron | 40.0% | |
GCTACCTCTACATTGATCTA+GGG | - | chr5.4:43359231-43359250 | MS.gene59678:intron | 40.0% | |
TAAGCCATTAAGCCAACAAC+CGG | + | chr5.4:43360776-43360795 | None:intergenic | 40.0% | |
TAAGGAGAGTTCTCCAAAGT+GGG | - | chr5.4:43357093-43357112 | MS.gene59678:CDS | 40.0% | |
TATGATGCAGGTACAATACC+GGG | + | chr5.4:43360274-43360293 | None:intergenic | 40.0% | |
TATGCTATAGCATCGCTGTT+TGG | + | chr5.4:43359881-43359900 | None:intergenic | 40.0% | |
TCATTCGGATAGCCATGTAT+GGG | + | chr5.4:43360427-43360446 | None:intergenic | 40.0% | |
TCCCTCCTATTCTCCTTAAA+TGG | + | chr5.4:43357571-43357590 | None:intergenic | 40.0% | |
TCTCCTTAAATGGAGAAGTC+AGG | + | chr5.4:43357561-43357580 | None:intergenic | 40.0% | |
TCTGAACTGATAGCCCATAA+TGG | + | chr5.4:43358454-43358473 | None:intergenic | 40.0% | |
TCTTGTTGGACTTATTGGTG+GGG | - | chr5.4:43360517-43360536 | MS.gene59678:CDS | 40.0% | |
TGCAGAAGAGAGTGAATTGA+TGG | + | chr5.4:43356970-43356989 | None:intergenic | 40.0% | |
TGCTACCTCTACATTGATCT+AGG | - | chr5.4:43359230-43359249 | MS.gene59678:intron | 40.0% | |
TTATCTTGGTTCAGAAAGGC+TGG | - | chr5.4:43360631-43360650 | MS.gene59678:CDS | 40.0% | |
TTCATTCGGATAGCCATGTA+TGG | + | chr5.4:43360428-43360447 | None:intergenic | 40.0% | |
TTCCCTGGCCAATTACATAA+TGG | + | chr5.4:43358305-43358324 | None:intergenic | 40.0% | |
TTCTTGCTTCAGATGTCAGA+AGG | - | chr5.4:43359593-43359612 | MS.gene59678:intron | 40.0% | |
TTGACAGGGAGATCCATTAT+GGG | - | chr5.4:43358438-43358457 | MS.gene59678:intron | 40.0% | |
TTGCCTGACTTCTCCATTTA+AGG | - | chr5.4:43357555-43357574 | MS.gene59678:intron | 40.0% | |
TTTGACAGGGAGATCCATTA+TGG | - | chr5.4:43358437-43358456 | MS.gene59678:intron | 40.0% | |
TTTGGCGAAAATACAGAGAG+CGG | - | chr5.4:43358730-43358749 | MS.gene59678:intron | 40.0% | |
! | CGAATGGATGCAAATTTTGG+TGG | - | chr5.4:43360578-43360597 | MS.gene59678:CDS | 40.0% |
! | GAGTACTTGGTTGGTTATCT+TGG | - | chr5.4:43360617-43360636 | MS.gene59678:CDS | 40.0% |
! | GGTCGAATGGATGCAAATTT+TGG | - | chr5.4:43360575-43360594 | MS.gene59678:CDS | 40.0% |
! | TCTCTATTGTGGGCTCTTTT+TGG | - | chr5.4:43360554-43360573 | MS.gene59678:CDS | 40.0% |
! | TTGATGGAGCTGAAAGGTTT+TGG | + | chr5.4:43356954-43356973 | None:intergenic | 40.0% |
!! | AACTAAAAGGTGCCTTAGTG+GGG | + | chr5.4:43357836-43357855 | None:intergenic | 40.0% |
!! | AAGGTTTTGGTATGTGCCAT+TGG | + | chr5.4:43356941-43356960 | None:intergenic | 40.0% |
!!! | AGTGATGATTTTGAGGCCAA+AGG | + | chr5.4:43356909-43356928 | None:intergenic | 40.0% |
!!! | ATTTTGAGGCCAAAGGTGAA+TGG | + | chr5.4:43356902-43356921 | None:intergenic | 40.0% |
AAGCAGTATAACGGTGCGTT+TGG | + | chr5.4:43357606-43357625 | None:intergenic | 45.0% | |
ACAAAGGATGCTCCTCTTGT+TGG | - | chr5.4:43360503-43360522 | MS.gene59678:intron | 45.0% | |
ACAATACCGGGTACGAGATA+TGG | + | chr5.4:43360262-43360281 | None:intergenic | 45.0% | |
ACTACGTACAGACTTGAGGT+TGG | - | chr5.4:43357917-43357936 | MS.gene59678:intron | 45.0% | |
AGAAACCTAAGGTCTCAGCA+GGG | - | chr5.4:43358053-43358072 | MS.gene59678:CDS | 45.0% | |
AGAGACAGTCAACTCTCTTG+TGG | - | chr5.4:43358471-43358490 | MS.gene59678:intron | 45.0% | |
AGAGAGCAAGACGCAAAACA+TGG | + | chr5.4:43359258-43359277 | None:intergenic | 45.0% | |
AGGTTGTCACCAATCAACCA+AGG | + | chr5.4:43360701-43360720 | None:intergenic | 45.0% | |
AGTAGCGATGGTCTAGGTTA+AGG | + | chr5.4:43357739-43357758 | None:intergenic | 45.0% | |
CACACATGTAACGAAGAGTG+TGG | + | chr5.4:43359160-43359179 | None:intergenic | 45.0% | |
CCACCAATAAGTCCAACAAG+AGG | + | chr5.4:43360518-43360537 | None:intergenic | 45.0% | |
CCTCTTGTTGGACTTATTGG+TGG | - | chr5.4:43360515-43360534 | MS.gene59678:CDS | 45.0% | |
CTAAGGAGAGTTCTCCAAAG+TGG | - | chr5.4:43357092-43357111 | MS.gene59678:CDS | 45.0% | |
CTTGTTGGACTTATTGGTGG+GGG | - | chr5.4:43360518-43360537 | MS.gene59678:CDS | 45.0% | |
GACTCGCATAAAACTCAACG+TGG | - | chr5.4:43357873-43357892 | MS.gene59678:intron | 45.0% | |
GAGACAGTCAACTCTCTTGT+GGG | - | chr5.4:43358472-43358491 | MS.gene59678:intron | 45.0% | |
GCATAGTTGAGGTCGAACAT+GGG | - | chr5.4:43357662-43357681 | MS.gene59678:intron | 45.0% | |
GCGTCTTGCTCTCTATCATT+TGG | - | chr5.4:43359264-43359283 | MS.gene59678:intron | 45.0% | |
GCTCCTCTTGTTGGACTTAT+TGG | - | chr5.4:43360512-43360531 | MS.gene59678:CDS | 45.0% | |
GGATAAAGGGGAACCTGTAA+AGG | - | chr5.4:43358836-43358855 | MS.gene59678:intron | 45.0% | |
TCTTTGCTTGGAGCCTAAAG+AGG | - | chr5.4:43360799-43360818 | MS.gene59678:CDS | 45.0% | |
TGCATAGTTGAGGTCGAACA+TGG | - | chr5.4:43357661-43357680 | MS.gene59678:intron | 45.0% | |
TGGTCCCTAGATCAATGTAG+AGG | + | chr5.4:43359238-43359257 | None:intergenic | 45.0% | |
TGGTGGCATAGTAGACAGAT+GGG | - | chr5.4:43360595-43360614 | MS.gene59678:CDS | 45.0% | |
TTAGCCACATCCGAGAAAGA+GGG | - | chr5.4:43357059-43357078 | MS.gene59678:CDS | 45.0% | |
TTATCTTCGACCCCAGTTTC+AGG | + | chr5.4:43358222-43358241 | None:intergenic | 45.0% | |
TTGCTTCCTTATGCTCCTGT+AGG | - | chr5.4:43357155-43357174 | MS.gene59678:CDS | 45.0% | |
! | AGAGCATTCAACTGTCAGCT+AGG | - | chr5.4:43358607-43358626 | MS.gene59678:intron | 45.0% |
! | AGAGTACCTACAGGAGCATA+AGG | + | chr5.4:43357164-43357183 | None:intergenic | 45.0% |
! | TTGGTGGCATAGTAGACAGA+TGG | - | chr5.4:43360594-43360613 | MS.gene59678:CDS | 45.0% |
!! | AGTAGACAGATGGGAGTACT+TGG | - | chr5.4:43360604-43360623 | MS.gene59678:CDS | 45.0% |
!! | AGTTCTCCAAAGTGGGTTGT+GGG | - | chr5.4:43357100-43357119 | MS.gene59678:CDS | 45.0% |
!! | CAAGTGGGTTCTTCTGGAAT+TGG | + | chr5.4:43357009-43357028 | None:intergenic | 45.0% |
!! | CACTGTATCCTCTGAAGCAT+GGG | - | chr5.4:43359986-43360005 | MS.gene59678:intron | 45.0% |
!! | CGAGTGCTGACATACTCTTT+AGG | - | chr5.4:43357712-43357731 | MS.gene59678:intron | 45.0% |
!! | CTTAGATATGTGCCGGTTGT+TGG | - | chr5.4:43360761-43360780 | MS.gene59678:CDS | 45.0% |
!! | GATTGGAGCATTGTCATCGT+CGG | + | chr5.4:43360456-43360475 | None:intergenic | 45.0% |
AAACCTAAGGTCTCAGCAGG+GGG | - | chr5.4:43358055-43358074 | MS.gene59678:CDS | 50.0% | |
ACCTAGACCATCGCTACTGT+TGG | - | chr5.4:43357741-43357760 | MS.gene59678:intron | 50.0% | |
AGCTTGCATGCTCCTGAAAC+TGG | - | chr5.4:43358207-43358226 | MS.gene59678:intron | 50.0% | |
AGGGGTCTCTTGACGTACTA+TGG | - | chr5.4:43359693-43359712 | MS.gene59678:intron | 50.0% | |
ATCTCCCTCTTTCTCGGATG+TGG | + | chr5.4:43357066-43357085 | None:intergenic | 50.0% | |
CCTAGACCATCGCTACTGTT+GGG | - | chr5.4:43357742-43357761 | MS.gene59678:intron | 50.0% | |
CTTGCATGCTCCTGAAACTG+GGG | - | chr5.4:43358209-43358228 | MS.gene59678:intron | 50.0% | |
GAAACCTAAGGTCTCAGCAG+GGG | - | chr5.4:43358054-43358073 | MS.gene59678:CDS | 50.0% | |
GACAGTTGAATGCTCTGTGC+TGG | + | chr5.4:43358603-43358622 | None:intergenic | 50.0% | |
GAGAAACCTAAGGTCTCAGC+AGG | - | chr5.4:43358052-43358071 | MS.gene59678:CDS | 50.0% | |
GCATATCCCAACAGTAGCGA+TGG | + | chr5.4:43357751-43357770 | None:intergenic | 50.0% | |
GCTTGCATGCTCCTGAAACT+GGG | - | chr5.4:43358208-43358227 | MS.gene59678:intron | 50.0% | |
GGGGTCTCTTGACGTACTAT+GGG | - | chr5.4:43359694-43359713 | MS.gene59678:intron | 50.0% | |
GGGTCTCTTGACGTACTATG+GGG | - | chr5.4:43359695-43359714 | MS.gene59678:intron | 50.0% | |
GTGTTCCCTCCATTCACCTT+TGG | - | chr5.4:43356890-43356909 | MS.gene59678:CDS | 50.0% | |
GTTAGCCACATCCGAGAAAG+AGG | - | chr5.4:43357058-43357077 | MS.gene59678:CDS | 50.0% | |
TGAGGCCAAAGGTGAATGGA+GGG | + | chr5.4:43356898-43356917 | None:intergenic | 50.0% | |
TGGAGGGAACACAGCAATGT+TGG | + | chr5.4:43356882-43356901 | None:intergenic | 50.0% | |
TTGAGGCCAAAGGTGAATGG+AGG | + | chr5.4:43356899-43356918 | None:intergenic | 50.0% | |
! | GCTGGCTTACGGGTTCATAT+GGG | - | chr5.4:43360649-43360668 | MS.gene59678:CDS | 50.0% |
! | GTACCCCCGGTTTGTTTGAT+AGG | - | chr5.4:43358770-43358789 | MS.gene59678:intron | 50.0% |
! | TGAGCACAAGTGGGTTCTTC+TGG | + | chr5.4:43357015-43357034 | None:intergenic | 50.0% |
!! | GACAGATGGGAGTACTTGGT+TGG | - | chr5.4:43360608-43360627 | MS.gene59678:CDS | 50.0% |
!! | GACGGTTTTGGCAGAGTAGT+TGG | - | chr5.4:43359451-43359470 | MS.gene59678:intron | 50.0% |
!! | GAGTTCTCCAAAGTGGGTTG+TGG | - | chr5.4:43357099-43357118 | MS.gene59678:CDS | 50.0% |
!! | GCACTGTATCCTCTGAAGCA+TGG | - | chr5.4:43359985-43360004 | MS.gene59678:intron | 50.0% |
!! | GGTTCAGAAAGGCTGGCTTA+CGG | - | chr5.4:43360638-43360657 | MS.gene59678:CDS | 50.0% |
!! | GTGGGCTCTTTTTGGTCGAA+TGG | - | chr5.4:43360562-43360581 | MS.gene59678:CDS | 50.0% |
!! | GTTCAGAAAGGCTGGCTTAC+GGG | - | chr5.4:43360639-43360658 | MS.gene59678:CDS | 50.0% |
!! | GTTCTCCAAAGTGGGTTGTG+GGG | - | chr5.4:43357101-43357120 | MS.gene59678:CDS | 50.0% |
!! | TGTGCCGGTTGTTGGCTTAA+TGG | - | chr5.4:43360769-43360788 | MS.gene59678:CDS | 50.0% |
AGAACCCACTTGTGCTCAGC+AGG | - | chr5.4:43357017-43357036 | MS.gene59678:CDS | 55.0% | |
AGGTCGAACATGGGTGCTAG+AGG | - | chr5.4:43357671-43357690 | MS.gene59678:intron | 55.0% | |
CCCAACAGTAGCGATGGTCT+AGG | + | chr5.4:43357745-43357764 | None:intergenic | 55.0% | |
CTCGGATGTGGCTAACTCTG+TGG | + | chr5.4:43357054-43357073 | None:intergenic | 55.0% | |
CTGAAGCATGGGTACGCGTA+CGG | - | chr5.4:43359997-43360016 | MS.gene59678:intron | 55.0% | |
GGTCGAACATGGGTGCTAGA+GGG | - | chr5.4:43357672-43357691 | MS.gene59678:intron | 55.0% | |
TACGCGTACCCATGCTTCAG+AGG | + | chr5.4:43359997-43360016 | None:intergenic | 55.0% | |
TATCCCCCTGCTGAGACCTT+AGG | + | chr5.4:43358061-43358080 | None:intergenic | 55.0% | |
TCACTCTGCTCACCCCACTA+AGG | - | chr5.4:43357821-43357840 | MS.gene59678:intron | 55.0% | |
TCAGACAAATGAGCGCACGC+TGG | - | chr5.4:43359188-43359207 | MS.gene59678:intron | 55.0% | |
TCAGCACTCGTACATGTCCG+AGG | + | chr5.4:43357702-43357721 | None:intergenic | 55.0% | |
TCGACCTGCTGAGCACAAGT+GGG | + | chr5.4:43357024-43357043 | None:intergenic | 55.0% | |
!! | GGCTGGCTTACGGGTTCATA+TGG | - | chr5.4:43360648-43360667 | MS.gene59678:CDS | 55.0% |
CAGCACCCCACAACCCACTT+TGG | + | chr5.4:43357109-43357128 | None:intergenic | 60.0% | |
GGGTGCTAGAGGGAATGCCT+CGG | - | chr5.4:43357682-43357701 | MS.gene59678:intron | 60.0% | |
GTCGACCTGCTGAGCACAAG+TGG | + | chr5.4:43357025-43357044 | None:intergenic | 60.0% | |
!! | AAGTGGGTTGTGGGGTGCTG+AGG | - | chr5.4:43357109-43357128 | MS.gene59678:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 43356858 | 43360826 | 43356858 | ID=MS.gene59678 |
chr5.4 | mRNA | 43356858 | 43360826 | 43356858 | ID=MS.gene59678.t1;Parent=MS.gene59678 |
chr5.4 | exon | 43360508 | 43360826 | 43360508 | ID=MS.gene59678.t1.exon1;Parent=MS.gene59678.t1 |
chr5.4 | CDS | 43360508 | 43360826 | 43360508 | ID=cds.MS.gene59678.t1;Parent=MS.gene59678.t1 |
chr5.4 | exon | 43359621 | 43359687 | 43359621 | ID=MS.gene59678.t1.exon2;Parent=MS.gene59678.t1 |
chr5.4 | CDS | 43359621 | 43359687 | 43359621 | ID=cds.MS.gene59678.t1;Parent=MS.gene59678.t1 |
chr5.4 | exon | 43358177 | 43358219 | 43358177 | ID=MS.gene59678.t1.exon3;Parent=MS.gene59678.t1 |
chr5.4 | CDS | 43358177 | 43358219 | 43358177 | ID=cds.MS.gene59678.t1;Parent=MS.gene59678.t1 |
chr5.4 | exon | 43357944 | 43358079 | 43357944 | ID=MS.gene59678.t1.exon4;Parent=MS.gene59678.t1 |
chr5.4 | CDS | 43357944 | 43358079 | 43357944 | ID=cds.MS.gene59678.t1;Parent=MS.gene59678.t1 |
chr5.4 | exon | 43356858 | 43357270 | 43356858 | ID=MS.gene59678.t1.exon5;Parent=MS.gene59678.t1 |
chr5.4 | CDS | 43356858 | 43357270 | 43356858 | ID=cds.MS.gene59678.t1;Parent=MS.gene59678.t1 |
Gene Sequence |
Protein sequence |