AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene68871


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68871.t1 MTR_2g025120 88.258 264 29 2 1 263 46 308 6.50e-171 474
MS.gene68871.t1 MTR_3g083370 76.753 271 59 2 1 270 46 313 2.79e-154 432
MS.gene68871.t1 MTR_5g085330 74.812 266 64 2 1 265 47 310 1.67e-149 421
MS.gene68871.t1 MTR_2g025120 91.011 178 16 0 1 178 46 223 1.57e-115 331
MS.gene68871.t1 MTR_3g083370 80.337 178 35 0 1 178 46 223 5.57e-105 304
MS.gene68871.t1 MTR_4g132770 97.826 138 3 0 109 246 24 161 1.62e-97 283
MS.gene68871.t1 MTR_3g088565 52.206 272 111 6 1 261 45 308 5.28e-87 261
MS.gene68871.t1 MTR_6g092620 48.669 263 121 5 1 259 45 297 1.06e-83 253
MS.gene68871.t1 MTR_4g132765 91.525 118 9 1 1 118 46 162 2.88e-58 200
MS.gene68871.t1 MTR_5g082750 38.839 224 131 4 39 260 137 356 3.10e-49 166
MS.gene68871.t1 MTR_3g070860 38.393 224 132 4 39 260 138 357 3.00e-46 158
MS.gene68871.t1 MTR_7g068650 38.393 224 133 3 39 260 142 362 4.25e-46 158
MS.gene68871.t1 MTR_4g015790 38.288 222 132 3 39 258 150 368 4.38e-46 158
MS.gene68871.t1 MTR_3g063180 37.759 241 125 8 9 243 115 336 1.38e-42 149
MS.gene68871.t1 MTR_3g092890 36.364 220 132 5 21 239 105 317 9.35e-42 146
MS.gene68871.t1 MTR_8g024120 43.429 175 93 4 65 239 155 323 1.42e-41 146
MS.gene68871.t1 MTR_5g055680 31.950 241 156 4 13 251 106 340 6.06e-40 142
MS.gene68871.t1 MTR_4g116010 35.217 230 140 3 1 223 89 316 9.15e-40 141
MS.gene68871.t1 MTR_0056s0160 31.718 227 146 4 28 251 5 225 1.83e-39 137
MS.gene68871.t1 MTR_5g032880 38.916 203 117 4 41 241 122 319 2.11e-39 145
MS.gene68871.t1 MTR_5g032880 40.437 183 104 3 41 221 468 647 3.31e-36 136
MS.gene68871.t1 MTR_0009s0050 31.950 241 156 4 13 251 8 242 3.61e-39 137
MS.gene68871.t1 MTR_0009s0050 31.950 241 156 4 13 251 8 242 4.42e-39 137
MS.gene68871.t1 MTR_5g048570 32.743 226 145 4 28 251 118 338 1.52e-38 138
MS.gene68871.t1 MTR_8g064200 29.278 263 166 5 4 251 89 346 2.76e-38 137
MS.gene68871.t1 MTR_8g064200 29.278 263 166 5 4 251 94 351 3.05e-38 137
MS.gene68871.t1 MTR_0009s0050 31.950 241 156 4 13 251 106 340 4.39e-38 137
MS.gene68871.t1 MTR_0009s0050 31.950 241 156 4 13 251 106 340 4.61e-38 137
MS.gene68871.t1 MTR_3g117420 32.959 267 163 8 1 259 95 353 6.76e-38 136
MS.gene68871.t1 MTR_2g072890 31.416 226 148 4 28 251 127 347 7.63e-38 136
MS.gene68871.t1 MTR_5g032870 40.000 185 106 3 41 223 130 311 8.93e-38 136
MS.gene68871.t1 MTR_1g070080 42.308 156 85 2 65 220 152 302 1.17e-37 135
MS.gene68871.t1 MTR_1g070135 37.989 179 104 3 65 243 152 323 2.21e-37 135
MS.gene68871.t1 MTR_5g048470 28.897 263 167 5 4 251 90 347 4.31e-37 134
MS.gene68871.t1 MTR_8g074050 32.950 261 160 7 1 253 95 348 4.43e-37 134
MS.gene68871.t1 MTR_7g016090 37.306 193 110 4 65 257 152 333 5.84e-37 134
MS.gene68871.t1 MTR_7g016090 37.306 193 110 4 65 257 150 331 5.97e-37 134
MS.gene68871.t1 MTR_5g055820 31.760 233 142 3 4 221 83 313 6.87e-37 134
MS.gene68871.t1 MTR_2g437380 32.714 269 148 7 1 251 1 254 7.04e-37 132
MS.gene68871.t1 MTR_0328s0030 30.620 258 157 5 10 251 87 338 9.95e-37 133
MS.gene68871.t1 MTR_5g048550 30.837 227 148 4 28 251 120 340 1.50e-36 133
MS.gene68871.t1 MTR_2g437380 32.714 269 148 7 1 251 95 348 4.85e-36 132
MS.gene68871.t1 MTR_1g033810 36.216 185 113 3 39 221 133 314 6.16e-36 131
MS.gene68871.t1 MTR_7g062580 33.921 227 141 4 28 251 128 348 2.09e-35 130
MS.gene68871.t1 MTR_2g072910 32.020 203 123 3 28 223 126 320 2.55e-35 130
MS.gene68871.t1 MTR_5g055900 30.973 226 149 3 28 251 120 340 2.77e-35 129
MS.gene68871.t1 MTR_8g009080 40.323 186 102 5 41 223 184 363 3.59e-35 130
MS.gene68871.t1 MTR_0009s0480 33.019 212 134 4 13 221 105 311 9.62e-35 128
MS.gene68871.t1 MTR_7g062570 32.340 235 142 5 24 251 124 348 1.09e-34 128
MS.gene68871.t1 MTR_7g062550 33.921 227 141 4 28 251 133 353 1.10e-34 128
MS.gene68871.t1 MTR_5g055690 31.416 226 148 3 28 251 121 341 1.12e-34 128
MS.gene68871.t1 MTR_2g069090 36.275 204 120 4 6 209 128 321 6.46e-34 126
MS.gene68871.t1 MTR_7g451860 35.874 223 126 7 36 255 128 336 1.04e-33 125
MS.gene68871.t1 MTR_7g047670 35.874 223 126 7 36 255 128 336 1.04e-33 125
MS.gene68871.t1 MTR_2g083030 33.645 214 114 6 32 239 119 310 1.14e-33 125
MS.gene68871.t1 MTR_5g005570 34.783 207 115 6 36 241 124 311 1.23e-33 125
MS.gene68871.t1 MTR_0009s0050 39.007 141 84 1 111 251 22 160 1.80e-33 120
MS.gene68871.t1 MTR_3g026150 32.917 240 149 6 13 248 16 247 1.83e-33 122
MS.gene68871.t1 MTR_2g069210 37.500 208 119 6 39 243 152 351 1.90e-33 125
MS.gene68871.t1 MTR_1g070120 38.365 159 93 2 65 223 152 305 6.88e-33 123
MS.gene68871.t1 MTR_5g011250 36.683 199 122 3 28 223 126 323 7.74e-33 123
MS.gene68871.t1 MTR_5g048850 30.500 200 134 2 24 221 116 312 8.21e-33 123
MS.gene68871.t1 MTR_8g074070 32.900 231 144 6 1 223 95 322 1.02e-32 123
MS.gene68871.t1 MTR_2g068950 31.538 260 150 9 6 253 123 366 1.11e-32 123
MS.gene68871.t1 MTR_6g015950 36.923 195 110 4 65 258 151 333 1.19e-32 122
MS.gene68871.t1 MTR_2g069300 38.462 169 99 3 39 207 142 305 1.22e-32 122
MS.gene68871.t1 MTR_3g026150 32.917 240 149 6 13 248 119 350 1.85e-32 122
MS.gene68871.t1 MTR_5g065010 34.637 179 112 4 65 242 151 325 2.19e-32 122
MS.gene68871.t1 MTR_1g043760 36.239 218 130 5 41 256 143 353 2.33e-32 122
MS.gene68871.t1 MTR_2g069190 36.098 205 120 5 39 240 156 352 2.42e-32 122
MS.gene68871.t1 MTR_1g070085 32.673 202 126 4 65 266 73 264 2.62e-32 120
MS.gene68871.t1 MTR_7g062600 31.897 232 148 5 24 251 120 345 3.07e-32 122
MS.gene68871.t1 MTR_1g093110 35.714 182 107 5 66 243 183 358 3.22e-32 122
MS.gene68871.t1 MTR_2g069010 36.898 187 101 5 69 248 185 361 3.76e-32 122
MS.gene68871.t1 MTR_2g083000 36.066 183 105 4 57 239 135 305 3.84e-32 120
MS.gene68871.t1 MTR_1g070100 37.107 159 96 2 65 223 69 223 5.57e-32 119
MS.gene68871.t1 MTR_2g069020 37.234 188 108 4 40 223 156 337 7.26e-32 121
MS.gene68871.t1 MTR_1g070085 34.078 179 112 3 65 243 151 323 8.40e-32 120
MS.gene68871.t1 MTR_1g070085 34.078 179 112 3 65 243 151 323 8.40e-32 120
MS.gene68871.t1 MTR_1g093140 38.889 162 90 4 66 224 186 341 1.20e-31 120
MS.gene68871.t1 MTR_2g069020 36.757 185 111 3 40 224 156 334 1.30e-31 120
MS.gene68871.t1 MTR_4g087090 39.877 163 90 4 64 223 154 311 1.40e-31 120
MS.gene68871.t1 MTR_2g068960 31.154 260 151 9 6 253 123 366 1.54e-31 120
MS.gene68871.t1 MTR_4g117880 38.372 172 100 3 39 210 150 315 1.89e-31 119
MS.gene68871.t1 MTR_8g075890 37.017 181 106 4 40 216 127 303 2.67e-31 119
MS.gene68871.t1 MTR_4g115990 30.508 236 143 5 1 234 84 300 2.84e-31 118
MS.gene68871.t1 MTR_5g022020 37.017 181 106 4 40 216 127 303 3.93e-31 119
MS.gene68871.t1 MTR_3g117485 28.632 234 151 6 1 223 22 250 4.06e-31 117
MS.gene68871.t1 MTR_4g093840 36.517 178 110 3 65 242 175 349 6.02e-31 118
MS.gene68871.t1 MTR_4g087110 39.752 161 91 3 65 223 156 312 6.40e-31 118
MS.gene68871.t1 MTR_5g048740 27.386 241 168 5 13 251 104 339 1.15e-30 117
MS.gene68871.t1 MTR_1g034140 34.855 241 133 7 3 223 68 304 1.30e-30 117
MS.gene68871.t1 MTR_3g117485 28.632 234 151 6 1 223 94 322 1.34e-30 117
MS.gene68871.t1 MTR_8g041620 38.750 160 90 4 66 221 183 338 2.10e-30 117
MS.gene68871.t1 MTR_2g069060 35.676 185 112 4 40 223 138 316 2.35e-30 116
MS.gene68871.t1 MTR_7g105070 36.098 205 112 6 8 207 119 309 2.44e-30 117
MS.gene68871.t1 MTR_7g063730 31.863 204 125 4 66 265 177 370 3.04e-30 116
MS.gene68871.t1 MTR_8g074070 33.333 228 128 6 1 223 95 303 5.20e-30 115
MS.gene68871.t1 MTR_1g062110 33.019 212 109 6 28 221 141 337 5.94e-30 116
MS.gene68871.t1 MTR_4g087140 39.752 161 92 3 65 223 156 313 9.46e-30 115
MS.gene68871.t1 MTR_3g072820 35.160 219 129 6 16 223 94 310 9.72e-30 114
MS.gene68871.t1 MTR_7g081710 36.872 179 105 4 65 242 163 334 1.03e-29 115
MS.gene68871.t1 MTR_0009s0400 36.765 136 84 1 117 252 4 137 1.11e-29 109
MS.gene68871.t1 MTR_5g059130 35.859 198 115 4 43 240 142 327 1.24e-29 114
MS.gene68871.t1 MTR_8g075830 34.807 181 110 4 40 216 127 303 1.43e-29 114
MS.gene68871.t1 MTR_4g087120 39.623 159 90 3 65 221 156 310 1.46e-29 114
MS.gene68871.t1 MTR_1g043770 39.521 167 95 3 41 207 142 302 1.51e-29 114
MS.gene68871.t1 MTR_8g009170 38.889 144 84 2 66 209 175 314 1.73e-29 114
MS.gene68871.t1 MTR_8g028435 33.854 192 119 4 19 210 131 314 2.47e-29 114
MS.gene68871.t1 MTR_8g009160 34.911 169 104 3 39 207 149 311 2.74e-29 114
MS.gene68871.t1 MTR_6g464620 32.948 173 110 3 64 236 186 352 3.76e-29 114
MS.gene68871.t1 MTR_1g034120 30.175 285 164 9 3 267 78 347 4.92e-29 113
MS.gene68871.t1 MTR_4g074130 34.951 206 116 7 37 239 124 314 8.94e-29 112
MS.gene68871.t1 MTR_3g072810 33.493 209 132 4 39 242 123 329 9.36e-29 112
MS.gene68871.t1 MTR_7g056353 35.979 189 109 5 40 224 130 310 1.09e-28 114
MS.gene68871.t1 MTR_7g102820 29.310 232 131 5 16 223 124 346 1.22e-28 112
MS.gene68871.t1 MTR_3g091350 36.875 160 93 3 65 221 172 326 1.39e-28 112
MS.gene68871.t1 MTR_5g059140 34.595 185 117 3 41 223 130 312 1.57e-28 111
MS.gene68871.t1 MTR_5g055800 26.749 243 165 6 13 251 106 339 1.78e-28 111
MS.gene68871.t1 MTR_8g041600 37.952 166 95 3 60 221 177 338 1.82e-28 112
MS.gene68871.t1 MTR_1g093120 36.196 163 93 4 66 223 180 336 2.66e-28 111
MS.gene68871.t1 MTR_8g009090 31.884 207 120 4 18 209 113 313 3.56e-28 110
MS.gene68871.t1 MTR_1g034060 29.825 285 165 9 3 267 78 347 4.26e-28 110
MS.gene68871.t1 MTR_8g469400 33.333 165 100 3 65 223 166 326 5.89e-28 110
MS.gene68871.t1 MTR_1g043810 36.095 169 102 3 39 207 142 304 1.09e-27 109
MS.gene68871.t1 MTR_4g024660 34.694 147 92 2 65 211 179 321 1.18e-27 109
MS.gene68871.t1 MTR_1g043775 36.686 169 101 3 39 207 142 304 1.39e-27 109
MS.gene68871.t1 MTR_3g091360 35.849 159 100 2 65 223 165 321 1.96e-27 108
MS.gene68871.t1 MTR_3g058610 36.364 154 92 3 65 216 154 303 2.17e-27 108
MS.gene68871.t1 MTR_7g056347 32.609 184 112 5 66 243 180 357 3.44e-27 108
MS.gene68871.t1 MTR_1g102070 32.948 173 103 4 64 236 188 347 3.75e-27 108
MS.gene68871.t1 MTR_8g062600 34.228 149 90 3 65 211 179 321 5.07e-27 108
MS.gene68871.t1 MTR_8g093980 28.936 235 149 8 1 222 103 332 6.42e-27 107
MS.gene68871.t1 MTR_8g063070 29.858 211 134 5 39 243 155 357 6.54e-27 107
MS.gene68871.t1 MTR_3g088745 34.270 178 105 6 65 242 165 330 7.41e-27 107
MS.gene68871.t1 MTR_8g009110 37.500 144 86 2 66 209 175 314 1.15e-26 107
MS.gene68871.t1 MTR_7g045650 36.478 159 96 2 34 190 139 294 1.76e-26 105
MS.gene68871.t1 MTR_8g093930 30.233 215 132 8 39 242 132 339 2.33e-26 106
MS.gene68871.t1 MTR_2g102570 29.185 233 150 6 1 221 88 317 3.51e-26 105
MS.gene68871.t1 MTR_8g008930 34.104 173 104 4 39 209 150 314 4.05e-26 105
MS.gene68871.t1 MTR_3g045230 40.310 129 72 4 117 243 213 338 5.98e-26 104
MS.gene68871.t1 MTR_2g019370 30.876 217 133 7 38 241 103 315 6.07e-26 104
MS.gene68871.t1 MTR_8g009180 32.973 185 106 4 39 209 63 243 6.85e-26 103
MS.gene68871.t1 MTR_3g464530 33.898 177 111 2 38 214 118 288 8.00e-26 103
MS.gene68871.t1 MTR_7g102720 39.231 130 72 4 117 243 194 319 9.28e-26 103
MS.gene68871.t1 MTR_7g016080 29.167 264 160 7 1 256 80 324 1.20e-25 103
MS.gene68871.t1 MTR_7g029655 35.294 170 101 5 40 207 153 315 1.30e-25 104
MS.gene68871.t1 MTR_8g033380 26.754 228 152 6 39 258 142 362 2.48e-25 103
MS.gene68871.t1 MTR_1g027290 35.714 182 104 6 52 230 140 311 2.52e-25 102
MS.gene68871.t1 MTR_1g070185 36.184 152 91 3 66 216 180 326 2.53e-25 103
MS.gene68871.t1 MTR_3g096500 28.502 207 133 6 39 236 154 354 2.67e-25 103
MS.gene68871.t1 MTR_3g043900 38.281 128 76 2 117 243 212 337 3.95e-25 102
MS.gene68871.t1 MTR_4g087100 34.783 161 99 3 65 223 156 312 5.32e-25 102
MS.gene68871.t1 MTR_0032s0040 32.673 202 121 7 9 206 129 319 1.53e-24 101
MS.gene68871.t1 MTR_1g070135 42.982 114 60 2 65 178 152 260 1.59e-24 99.8
MS.gene68871.t1 MTR_2g068840 27.843 255 154 8 9 252 119 354 2.20e-24 100
MS.gene68871.t1 MTR_1g032140 35.238 210 99 7 21 210 125 317 2.42e-24 100
MS.gene68871.t1 MTR_1g043840 39.130 138 80 2 69 206 52 185 2.52e-24 100
MS.gene68871.t1 MTR_1g081840 30.857 175 115 4 68 242 179 347 2.56e-24 100
MS.gene68871.t1 MTR_1g048940 32.609 184 113 5 64 244 159 334 7.96e-24 99.0
MS.gene68871.t1 MTR_7g078010 35.602 191 109 7 40 223 156 339 1.76e-23 98.2
MS.gene68871.t1 MTR_2g070870 32.000 200 120 5 54 248 126 314 2.25e-23 97.4
MS.gene68871.t1 MTR_7g062560 32.237 152 100 2 111 262 207 355 6.55e-23 96.7
MS.gene68871.t1 MTR_1g032250 48.421 95 47 2 117 210 231 324 6.64e-23 96.7
MS.gene68871.t1 MTR_8g006930 34.466 206 124 6 21 224 140 336 8.79e-23 96.3
MS.gene68871.t1 MTR_3g040410 28.283 198 137 4 45 242 98 290 9.68e-23 95.5
MS.gene68871.t1 MTR_5g048850 31.013 158 104 2 24 179 116 270 1.72e-22 94.0
MS.gene68871.t1 MTR_5g055690 31.609 174 113 3 7 178 101 270 1.85e-22 94.0
MS.gene68871.t1 MTR_1g070110 31.667 180 85 4 65 243 76 218 1.86e-22 93.2
MS.gene68871.t1 MTR_4g119410 34.239 184 109 5 66 243 180 357 3.85e-22 94.7
MS.gene68871.t1 MTR_8g009080 38.686 137 78 4 41 177 184 314 5.41e-22 93.6
MS.gene68871.t1 MTR_0009s0480 31.361 169 108 4 13 178 105 268 5.85e-22 92.4
MS.gene68871.t1 MTR_8g009080 39.552 134 75 4 41 174 184 311 7.72e-22 93.6
MS.gene68871.t1 MTR_8g461330 29.237 236 150 7 38 259 102 334 8.92e-22 93.2
MS.gene68871.t1 MTR_1g011580 26.549 226 156 6 1 219 99 321 1.04e-21 93.2
MS.gene68871.t1 MTR_1g032220 37.984 129 75 4 117 243 231 356 1.14e-21 93.2
MS.gene68871.t1 MTR_4g087130 38.514 148 85 3 78 223 168 311 2.40e-21 92.4
MS.gene68871.t1 MTR_7g056393 30.041 243 151 8 7 243 128 357 2.95e-21 92.0
MS.gene68871.t1 MTR_3g026150 34.118 170 102 5 13 178 119 282 8.35e-21 89.7
MS.gene68871.t1 MTR_8g030880 32.159 227 131 10 20 242 88 295 1.61e-20 89.4
MS.gene68871.t1 MTR_2g068800 32.778 180 100 6 28 196 112 281 5.23e-20 87.4
MS.gene68871.t1 MTR_8g009120 37.705 122 72 3 89 210 186 303 8.28e-20 87.8
MS.gene68871.t1 MTR_2g069060 35.971 139 83 3 40 178 116 248 1.11e-19 85.9
MS.gene68871.t1 MTR_2g072910 29.814 161 98 3 28 181 126 278 1.19e-19 86.3
MS.gene68871.t1 MTR_7g077670 31.795 195 118 8 56 242 108 295 1.43e-19 87.0
MS.gene68871.t1 MTR_8g009150 30.233 172 95 4 39 210 149 295 2.88e-19 86.3
MS.gene68871.t1 MTR_1g043770 37.226 137 80 3 41 177 142 272 3.18e-19 85.5
MS.gene68871.t1 MTR_8g041600 37.815 119 70 2 60 178 177 291 2.37e-18 83.2
MS.gene68871.t1 MTR_1g043810 34.532 139 85 3 39 177 142 274 4.92e-18 82.8
MS.gene68871.t1 MTR_1g043775 35.252 139 84 3 39 177 142 274 7.43e-18 82.0
MS.gene68871.t1 MTR_4g011720 31.515 165 107 4 60 223 119 278 7.77e-18 82.0
MS.gene68871.t1 MTR_4g096840 27.473 182 124 4 64 239 134 313 1.51e-17 81.3
MS.gene68871.t1 MTR_5g025090 35.433 127 77 3 128 252 167 290 9.80e-17 78.6
MS.gene68871.t1 MTR_4g123020 27.523 218 144 5 42 248 96 310 9.98e-17 79.0
MS.gene68871.t1 MTR_2g033270 29.319 191 119 6 65 248 126 307 3.63e-16 77.4
MS.gene68871.t1 MTR_1g062110 31.361 169 83 6 28 178 141 294 3.93e-16 77.0
MS.gene68871.t1 MTR_1g032240 42.105 95 44 3 117 210 64 148 4.03e-16 74.7
MS.gene68871.t1 MTR_4g011690 31.325 166 107 5 60 223 119 279 4.15e-16 77.0
MS.gene68871.t1 MTR_6g088665 38.400 125 65 5 124 240 201 321 5.91e-16 77.0
MS.gene68871.t1 MTR_6g088665 38.400 125 65 5 124 240 202 322 6.62e-16 76.6
MS.gene68871.t1 MTR_8g009170 33.929 112 70 2 66 177 175 282 9.35e-16 75.9
MS.gene68871.t1 MTR_3g464530 31.915 141 90 2 38 178 118 252 2.36e-15 73.9
MS.gene68871.t1 MTR_1g086550 29.500 200 115 8 64 248 134 322 4.39e-15 74.3
MS.gene68871.t1 MTR_4g021380 27.273 220 136 7 50 249 93 308 5.62e-15 73.9
MS.gene68871.t1 MTR_8g102600 33.333 162 88 7 65 214 83 236 5.99e-15 73.2
MS.gene68871.t1 MTR_4g100600 30.244 205 120 8 64 251 123 321 7.05e-15 73.6
MS.gene68871.t1 MTR_8g102600 33.333 162 88 7 65 214 133 286 1.16e-14 73.2
MS.gene68871.t1 MTR_3g108520 28.221 163 112 4 65 225 125 284 3.90e-14 71.6
MS.gene68871.t1 MTR_3g040440 46.875 64 33 1 128 191 16 78 2.69e-13 68.6
MS.gene68871.t1 MTR_4g100590 28.994 169 101 6 64 223 75 233 1.08e-12 66.6
MS.gene68871.t1 MTR_4g100590 28.994 169 101 6 64 223 122 280 1.61e-12 66.6
MS.gene68871.t1 MTR_5g025050 33.613 119 70 4 128 242 167 280 6.52e-12 65.1
MS.gene68871.t1 MTR_7g078010 34.286 140 84 5 40 178 156 288 1.03e-11 64.3
MS.gene68871.t1 MTR_5g027230 33.065 124 74 4 128 247 168 286 1.11e-11 64.3
MS.gene68871.t1 MTR_5g024940 32.773 119 71 4 128 242 149 262 3.20e-11 62.8
MS.gene68871.t1 MTR_4g011720 32.500 120 75 4 60 178 119 233 3.33e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68871.t1 AT1G12010 73.384 263 66 1 1 263 49 307 1.50e-146 413
MS.gene68871.t1 AT1G05010 70.863 278 73 3 1 270 46 323 7.66e-146 411
MS.gene68871.t1 AT1G62380 71.587 271 72 2 1 270 49 315 1.99e-145 410
MS.gene68871.t1 AT2G19590 47.529 263 125 4 1 261 38 289 6.09e-89 266
MS.gene68871.t1 AT2G19590 47.529 263 125 4 1 261 53 304 1.05e-88 266
MS.gene68871.t1 AT1G77330 51.103 272 113 6 1 261 45 307 9.91e-86 258
MS.gene68871.t1 AT5G24530 35.857 251 146 6 1 241 77 322 1.08e-45 157
MS.gene68871.t1 AT3G11180 39.901 203 117 3 39 239 179 378 2.63e-44 154
MS.gene68871.t1 AT3G11180 39.901 203 117 3 39 239 179 378 3.24e-44 154
MS.gene68871.t1 AT5G05600 39.024 205 116 4 39 239 150 349 9.63e-44 152
MS.gene68871.t1 AT4G16330 40.976 205 114 5 39 241 46 245 2.37e-43 148
MS.gene68871.t1 AT4G10490 37.674 215 121 5 46 260 144 345 2.59e-43 150
MS.gene68871.t1 AT4G16330 40.976 205 114 5 39 241 152 351 2.86e-42 148
MS.gene68871.t1 AT4G10500 39.691 194 104 5 46 239 146 326 1.51e-41 146
MS.gene68871.t1 AT1G78550 33.772 228 141 5 1 221 18 242 3.47e-41 143
MS.gene68871.t1 AT2G38240 32.669 251 156 4 1 242 88 334 4.54e-41 145
MS.gene68871.t1 AT1G78550 33.772 228 141 5 1 221 96 320 1.45e-40 144
MS.gene68871.t1 AT3G55970 32.800 250 158 5 1 242 97 344 4.76e-40 142
MS.gene68871.t1 AT4G25310 36.548 197 121 2 28 222 124 318 9.82e-39 139
MS.gene68871.t1 AT1G17010 32.314 229 146 3 1 222 97 323 9.73e-38 136
MS.gene68871.t1 AT5G20400 32.618 233 142 4 1 223 89 316 8.40e-37 134
MS.gene68871.t1 AT1G17020 33.945 218 140 3 13 228 114 329 1.39e-36 133
MS.gene68871.t1 AT5G08640 38.636 176 104 3 64 239 154 325 7.38e-36 130
MS.gene68871.t1 AT5G08640 38.636 176 104 3 64 239 154 325 7.38e-36 130
MS.gene68871.t1 AT1G49390 32.609 230 146 3 1 223 10 237 1.05e-35 129
MS.gene68871.t1 AT4G21200 35.841 226 128 6 1 218 84 300 2.36e-35 129
MS.gene68871.t1 AT1G49390 32.174 230 147 3 1 223 89 316 6.03e-35 129
MS.gene68871.t1 AT3G21420 33.906 233 145 6 24 252 128 355 1.14e-34 128
MS.gene68871.t1 AT4G25300 34.010 197 126 2 28 222 127 321 2.59e-34 127
MS.gene68871.t1 AT5G54000 31.304 230 149 5 1 223 10 237 1.01e-33 123
MS.gene68871.t1 AT1G06620 34.764 233 139 6 21 250 134 356 1.98e-33 125
MS.gene68871.t1 AT5G20550 33.047 233 142 6 1 223 89 317 6.06e-33 123
MS.gene68871.t1 AT5G54000 31.304 230 149 5 1 223 90 317 7.94e-33 123
MS.gene68871.t1 AT2G30830 38.889 198 107 7 40 234 144 330 9.04e-33 123
MS.gene68871.t1 AT3G51240 38.122 181 104 4 40 216 42 218 1.26e-32 120
MS.gene68871.t1 AT5G07200 30.841 214 134 3 39 242 146 355 1.75e-32 122
MS.gene68871.t1 AT5G59530 37.234 188 109 4 39 223 149 330 2.12e-32 122
MS.gene68871.t1 AT5G59540 34.615 208 121 5 39 237 151 352 6.98e-32 121
MS.gene68871.t1 AT3G51240 38.122 181 104 4 40 216 126 302 9.52e-32 120
MS.gene68871.t1 AT4G25300 33.962 159 103 1 65 223 72 228 2.55e-31 117
MS.gene68871.t1 AT4G22880 32.287 223 141 3 1 214 92 313 2.74e-30 116
MS.gene68871.t1 AT4G22880 32.287 223 141 3 1 214 92 313 2.74e-30 116
MS.gene68871.t1 AT4G22880 32.287 223 141 3 1 214 92 313 2.74e-30 116
MS.gene68871.t1 AT2G36690 30.769 234 136 6 1 221 107 327 8.28e-30 115
MS.gene68871.t1 AT2G36690 30.769 234 136 6 1 221 107 327 8.28e-30 115
MS.gene68871.t1 AT1G55290 31.818 220 137 6 28 243 135 345 9.60e-30 115
MS.gene68871.t1 AT1G60980 28.279 244 154 5 11 242 117 351 1.19e-29 115
MS.gene68871.t1 AT3G19010 41.250 160 88 3 64 221 152 307 1.60e-29 114
MS.gene68871.t1 AT3G19010 41.250 160 88 3 64 221 152 307 1.60e-29 114
MS.gene68871.t1 AT5G43450 36.170 188 111 5 39 223 147 328 2.20e-29 114
MS.gene68871.t1 AT5G63590 35.294 204 121 5 41 239 100 297 3.42e-29 112
MS.gene68871.t1 AT3G12900 31.646 237 137 9 20 245 120 342 9.60e-29 112
MS.gene68871.t1 AT1G04350 36.598 194 113 6 34 223 139 326 2.10e-28 111
MS.gene68871.t1 AT1G04380 36.058 208 120 7 40 243 131 329 2.52e-28 111
MS.gene68871.t1 AT3G13610 34.615 182 108 5 66 243 171 345 2.85e-28 111
MS.gene68871.t1 AT3G61400 40.000 170 93 6 41 207 155 318 2.93e-28 111
MS.gene68871.t1 AT2G30840 35.821 201 109 8 40 234 148 334 3.27e-28 111
MS.gene68871.t1 AT1G06650 32.743 226 137 8 2 223 121 335 3.37e-28 111
MS.gene68871.t1 AT4G25420 30.899 178 117 3 65 242 183 354 4.67e-28 110
MS.gene68871.t1 AT1G80340 27.799 259 163 7 1 244 86 335 5.67e-28 110
MS.gene68871.t1 AT1G03410 35.979 189 109 6 40 223 147 328 6.87e-28 110
MS.gene68871.t1 AT1G15550 29.289 239 156 6 13 244 110 342 8.32e-28 110
MS.gene68871.t1 AT1G03410 35.979 189 109 6 40 223 184 365 8.77e-28 110
MS.gene68871.t1 AT3G19000 40.373 161 90 3 65 223 158 314 1.27e-27 109
MS.gene68871.t1 AT5G43440 35.106 188 114 5 39 223 149 331 2.11e-27 108
MS.gene68871.t1 AT2G44800 33.871 186 113 5 65 248 166 343 4.34e-27 108
MS.gene68871.t1 AT3G60290 34.831 178 106 5 65 240 166 335 4.81e-27 107
MS.gene68871.t1 AT1G06640 33.333 210 128 7 40 245 154 355 8.99e-27 107
MS.gene68871.t1 AT2G25450 34.737 190 113 6 41 225 145 328 1.26e-26 106
MS.gene68871.t1 AT5G05600 38.194 144 82 3 39 178 150 290 1.55e-26 105
MS.gene68871.t1 AT5G63595 36.196 163 81 4 64 221 130 274 5.28e-26 103
MS.gene68871.t1 AT5G51810 29.213 178 120 3 65 242 181 352 6.66e-26 105
MS.gene68871.t1 AT1G03400 41.429 140 77 3 69 207 164 299 9.50e-26 104
MS.gene68871.t1 AT3G55970 31.183 186 120 3 1 178 97 282 1.13e-25 103
MS.gene68871.t1 AT5G07480 33.516 182 109 5 65 240 50 225 1.44e-24 99.0
MS.gene68871.t1 AT2G30840 34.826 201 105 9 40 234 148 328 4.37e-24 99.8
MS.gene68871.t1 AT4G25310 30.457 197 105 2 28 222 124 290 4.62e-24 99.4
MS.gene68871.t1 AT1G78440 30.978 184 114 6 65 239 123 302 5.88e-24 99.0
MS.gene68871.t1 AT5G07480 33.516 182 109 5 65 240 159 334 6.04e-24 99.4
MS.gene68871.t1 AT5G63600 31.844 179 112 4 65 240 139 310 1.18e-23 98.2
MS.gene68871.t1 AT1G50960 31.875 160 105 2 49 208 136 291 1.22e-23 98.2
MS.gene68871.t1 AT1G30040 33.333 180 111 7 65 239 137 312 1.59e-23 98.2
MS.gene68871.t1 AT3G19010 45.455 110 57 2 114 221 169 277 3.08e-23 97.1
MS.gene68871.t1 AT1G80330 26.642 274 181 9 1 261 85 351 4.52e-23 97.1
MS.gene68871.t1 AT1G44090 31.638 177 115 4 67 242 186 357 6.26e-23 97.1
MS.gene68871.t1 AT5G63600 32.222 180 111 5 65 240 139 311 6.57e-23 96.3
MS.gene68871.t1 AT1G06645 32.979 188 113 6 40 223 167 345 7.48e-23 96.7
MS.gene68871.t1 AT5G12270 35.625 160 90 5 99 252 200 352 1.18e-22 95.9
MS.gene68871.t1 AT3G47190 35.526 152 92 4 65 215 149 295 4.94e-22 94.0
MS.gene68871.t1 AT1G06620 35.443 158 94 4 21 178 134 283 1.04e-20 89.4
MS.gene68871.t1 AT1G03400 35.119 168 76 4 69 207 164 327 1.38e-20 90.5
MS.gene68871.t1 AT3G19000 38.710 124 70 3 65 186 158 277 3.45e-20 87.8
MS.gene68871.t1 AT5G43450 37.500 136 79 4 39 174 147 276 3.99e-20 87.8
MS.gene68871.t1 AT2G34555 30.899 178 117 3 65 239 133 307 4.39e-20 88.6
MS.gene68871.t1 AT4G23340 31.472 197 120 8 56 242 103 294 4.40e-20 88.2
MS.gene68871.t1 AT3G61400 39.286 140 77 5 41 178 155 288 9.09e-20 87.0
MS.gene68871.t1 AT4G23340 32.044 181 111 7 69 242 1 176 1.33e-19 84.7
MS.gene68871.t1 AT4G21690 27.461 193 125 6 62 244 150 337 2.73e-19 86.7
MS.gene68871.t1 AT2G30840 36.232 138 82 4 40 177 148 279 4.10e-19 85.5
MS.gene68871.t1 AT3G19010 41.667 120 64 3 64 181 152 267 5.57e-19 84.7
MS.gene68871.t1 AT1G06650 31.250 176 110 6 2 177 121 285 2.63e-18 83.2
MS.gene68871.t1 AT1G06640 33.103 145 91 4 40 184 154 292 2.78e-18 83.2
MS.gene68871.t1 AT5G59540 32.857 140 88 3 39 178 151 284 3.16e-18 82.8
MS.gene68871.t1 AT3G50210 28.063 253 153 9 1 232 60 304 4.27e-18 82.8
MS.gene68871.t1 AT3G50210 28.063 253 153 9 1 232 60 304 4.27e-18 82.8
MS.gene68871.t1 AT3G50210 28.063 253 153 9 1 232 60 304 4.27e-18 82.8
MS.gene68871.t1 AT1G47990 28.283 198 126 6 65 249 115 309 1.38e-17 81.3
MS.gene68871.t1 AT3G50210 30.000 190 116 5 53 232 40 222 1.41e-17 80.1
MS.gene68871.t1 AT1G04380 35.971 139 83 4 40 178 131 263 1.58e-17 80.5
MS.gene68871.t1 AT1G06640 34.815 135 82 4 40 174 154 282 2.05e-17 80.5
MS.gene68871.t1 AT3G49630 27.919 197 133 5 52 240 49 244 2.05e-17 80.1
MS.gene68871.t1 AT5G43935 34.507 142 86 4 99 240 149 283 3.04e-17 80.1
MS.gene68871.t1 AT3G49630 27.919 197 133 5 52 240 118 313 4.76e-17 80.1
MS.gene68871.t1 AT3G49630 27.919 197 133 5 52 240 122 317 5.03e-17 79.7
MS.gene68871.t1 AT5G43440 34.559 136 84 4 39 174 149 279 1.17e-16 78.2
MS.gene68871.t1 AT5G63580 34.591 159 88 5 26 178 92 240 1.72e-16 77.0
MS.gene68871.t1 AT3G49620 28.723 188 120 5 52 233 147 326 2.06e-16 78.6
MS.gene68871.t1 AT5G63580 34.395 157 87 5 26 176 92 238 2.84e-16 76.6
MS.gene68871.t1 AT5G58660 28.387 155 106 4 63 214 159 311 3.70e-16 77.8
MS.gene68871.t1 AT1G02400 27.962 211 136 9 61 261 125 329 1.64e-14 72.8
MS.gene68871.t1 AT4G22870 42.647 68 39 0 147 214 2 69 3.02e-14 67.8
MS.gene68871.t1 AT5G51810 30.769 117 77 2 65 181 181 293 5.79e-14 70.9
MS.gene68871.t1 AT1G52820 28.736 174 110 5 51 223 121 281 6.74e-14 70.9
MS.gene68871.t1 AT4G16765 28.261 184 120 7 65 241 59 237 1.55e-13 68.9
MS.gene68871.t1 AT4G16765 28.261 184 120 7 65 241 59 237 1.55e-13 68.9
MS.gene68871.t1 AT4G16765 28.261 184 120 7 65 241 59 237 1.55e-13 68.9
MS.gene68871.t1 AT4G25420 30.702 114 75 2 65 178 183 292 7.41e-13 67.8
MS.gene68871.t1 AT4G16765 28.916 166 108 6 65 223 59 221 1.27e-12 66.2
MS.gene68871.t1 AT4G16765 32.773 119 71 4 128 241 77 191 1.92e-12 65.1
MS.gene68871.t1 AT1G35190 34.167 120 70 4 126 240 173 288 2.62e-12 66.2
MS.gene68871.t1 AT3G46480 39.362 94 50 3 126 214 154 245 3.13e-12 65.9
MS.gene68871.t1 AT1G35190 34.167 120 70 4 126 240 196 311 3.37e-12 65.9
MS.gene68871.t1 AT1G14130 29.697 165 108 3 59 221 109 267 3.60e-12 65.9
MS.gene68871.t1 AT4G03070 27.500 200 119 8 52 243 123 304 1.61e-11 63.9
MS.gene68871.t1 AT4G22870 39.683 63 38 0 152 214 48 110 6.50e-11 59.7

Find 74 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATCCATTGGCCATCTTTA+AGG 0.155824 8.2:+1489152 None:intergenic
GGATCCAAGGGACCAAATTT+TGG 0.175226 8.2:-1489298 MS.gene68871:CDS
CTAACTTTGGTTCCAAAATT+TGG 0.232333 8.2:+1489286 None:intergenic
AGCTTCAAATCTTGGCTCTT+TGG 0.245143 8.2:+1488698 None:intergenic
ATTAGTACTATACCTCAATT+TGG 0.306583 8.2:+1489086 None:intergenic
GACTTGCTGTGTGAGAATCT+TGG 0.323307 8.2:-1489355 MS.gene68871:CDS
GCCTTCATAGCTTCAAATCT+TGG 0.334798 8.2:+1488690 None:intergenic
GGTTCCAAAATTTGGTCCCT+TGG 0.349046 8.2:+1489294 None:intergenic
TGCAGTGGAACTTGAGAAAC+TGG 0.361619 8.2:-1489392 MS.gene68871:CDS
CAAATCTTGGCTCTTTGGCT+TGG 0.362611 8.2:+1488703 None:intergenic
GCTCTTTGGCTTGGAATTTG+AGG 0.371223 8.2:+1488712 None:intergenic
GTCCACCAACCTTGTCATCT+TGG 0.380130 8.2:+1489182 None:intergenic
ACTTGCTGTGTGAGAATCTT+GGG 0.390042 8.2:-1489354 MS.gene68871:CDS
CTGAGTCCTTTGATAAGATC+TGG 0.404368 8.2:+1489241 None:intergenic
CAGAAATCAATGACTTGGAT+TGG 0.409232 8.2:-1489713 MS.gene68871:CDS
TATTTGAAGAAAGTCTTTCA+TGG 0.410538 8.2:-1489319 MS.gene68871:CDS
ACATGCTTAGGCAGTTGGTA+TGG 0.424335 8.2:+1488650 None:intergenic
TCATCACATGCTTAGGCAGT+TGG 0.430982 8.2:+1488645 None:intergenic
GGAGCAAAGGTTCAAAGAAA+TGG 0.439953 8.2:-1489766 MS.gene68871:CDS
GGCAGTTGGTATGGGAATGT+TGG 0.451851 8.2:+1488659 None:intergenic
ATCTCTGATATGTTAGAGTT+AGG 0.452914 8.2:+1489663 None:intergenic
CACACTCTTGTATTTGCCAT+TGG 0.461320 8.2:+1488908 None:intergenic
AGAAATCAATGACTTGGATT+GGG 0.472666 8.2:-1489712 MS.gene68871:CDS
AATCTCTCCTGCAGCAGCCT+TGG 0.474285 8.2:-1488808 MS.gene68871:CDS
TATGGGAATGTTGGATTCCA+TGG 0.476603 8.2:+1488668 None:intergenic
TCCTTCACCAAGGCTGCTGC+AGG 0.479391 8.2:+1488801 None:intergenic
CATTCCATTGTTATCAACCT+TGG 0.482440 8.2:-1489112 MS.gene68871:CDS
GAGAATCTTGGGCTAGAGAA+AGG 0.487980 8.2:-1489343 MS.gene68871:CDS
AGGAGGGTAGTTGCTAACTT+TGG 0.492635 8.2:+1489273 None:intergenic
GAGATTACTGCATCATTGCC+TGG 0.493110 8.2:+1488825 None:intergenic
CAACCTTGGTGACCAAATTG+AGG 0.503779 8.2:-1489098 MS.gene68871:intron
CTCAGAGCCCACACAGATGC+TGG 0.508251 8.2:-1489223 MS.gene68871:CDS
CCTTTGATAAGATCTGGCTT+AGG 0.514259 8.2:+1489247 None:intergenic
GCCAAGATTTGAAGCTATGA+AGG 0.524377 8.2:-1488691 MS.gene68871:CDS
TTAAAACAGGTGATTACCAA+TGG 0.524820 8.2:-1488924 MS.gene68871:intron
CATGCTTAGGCAGTTGGTAT+GGG 0.532498 8.2:+1488651 None:intergenic
TTGATCTTGATCATGACTAC+AGG 0.534190 8.2:-1489638 MS.gene68871:intron
TTCCAAGATGACAAGGTTGG+TGG 0.537071 8.2:-1489184 MS.gene68871:CDS
CTATTCCAAGATGACAAGGT+TGG 0.537341 8.2:-1489187 MS.gene68871:CDS
TGTAGTCATGATCAAGATCA+AGG 0.541430 8.2:+1489640 None:intergenic
TCCTGCAGCAGCCTTGGTGA+AGG 0.544976 8.2:-1488802 MS.gene68871:CDS
CTGATATGTTAGAGTTAGGA+AGG 0.547684 8.2:+1489667 None:intergenic
AGCTCCTTAAAGATGGCCAA+TGG 0.550067 8.2:-1489156 MS.gene68871:CDS
ATTTGAAGCTATGAAGGCCA+TGG 0.550162 8.2:-1488685 MS.gene68871:CDS
GAAAGTCTTTCATGGATCCA+AGG 0.558321 8.2:-1489311 MS.gene68871:CDS
TCAGTCAGAAATCAATGACT+TGG 0.558442 8.2:-1489718 MS.gene68871:CDS
GATTACATGAAACTCTATGC+TGG 0.558834 8.2:-1488735 MS.gene68871:CDS
TGGATTATAAAATGATGCTA+TGG 0.559145 8.2:+1488845 None:intergenic
CTTCTGTTTGAGCAATTACA+CGG 0.563408 8.2:+1488880 None:intergenic
GGACTTCAGCTCCTTAAAGA+TGG 0.565268 8.2:-1489163 MS.gene68871:CDS
ATAAGATCTGGCTTAGGACA+AGG 0.565790 8.2:+1489253 None:intergenic
AAAGAAATGGTAGCAAGCAA+AGG 0.566022 8.2:-1489753 MS.gene68871:CDS
GTCACCAAGGTTGATAACAA+TGG 0.568643 8.2:+1489108 None:intergenic
TTGGTGGGACATCAATCCAT+TGG 0.570294 8.2:+1489140 None:intergenic
CGTGTAATTGCTCAAACAGA+AGG 0.571834 8.2:-1488879 MS.gene68871:CDS
ACAATGGAATGACGCATTGG+TGG 0.574276 8.2:+1489124 None:intergenic
AGAATCTTGGGCTAGAGAAA+GGG 0.575627 8.2:-1489342 MS.gene68871:CDS
AGAAAACTACAAGAAGCGTA+TGG 0.577170 8.2:-1489787 MS.gene68871:CDS
ACAAGAAGCGTATGGAGCAA+AGG 0.585634 8.2:-1489779 MS.gene68871:CDS
CAATGGAATGACGCATTGGT+GGG 0.600451 8.2:+1489125 None:intergenic
CCTAAGCCAGATCTTATCAA+AGG 0.602471 8.2:-1489247 MS.gene68871:CDS
AAAGTCTTTCATGGATCCAA+GGG 0.606069 8.2:-1489310 MS.gene68871:CDS
GGCAATGAAGGAATTTGCAG+TGG 0.619899 8.2:-1489407 MS.gene68871:CDS
ATAACAATGGAATGACGCAT+TGG 0.625745 8.2:+1489121 None:intergenic
GTGTAATTGCTCAAACAGAA+GGG 0.628227 8.2:-1488878 MS.gene68871:CDS
TTTACTATTCCAAGATGACA+AGG 0.632555 8.2:-1489191 MS.gene68871:CDS
CACATCTAATTCCTTCACCA+AGG 0.639481 8.2:+1488791 None:intergenic
TATGCCACCAGCATCTGTGT+GGG 0.645103 8.2:+1489216 None:intergenic
TTATGCCACCAGCATCTGTG+TGG 0.659371 8.2:+1489215 None:intergenic
ATACCTCAATTTGGTCACCA+AGG 0.670046 8.2:+1489095 None:intergenic
AGATCTGGCTTAGGACAAGG+AGG 0.670854 8.2:+1489256 None:intergenic
AGAGCCCACACAGATGCTGG+TGG 0.706268 8.2:-1489220 MS.gene68871:CDS
ATATGTTAGAGTTAGGAAGG+TGG 0.716594 8.2:+1489670 None:intergenic
GATCTGGCTTAGGACAAGGA+GGG 0.742716 8.2:+1489257 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTGTGTTATTAATTTT+AGG - chr8.2:1489037-1489056 MS.gene68871:intron 10.0%
!! ATATAATACTTTGTTAAAAC+AGG - chr8.2:1489532-1489551 MS.gene68871:intron 15.0%
!!! AATCATCAAAAACAAATTTT+GGG + chr8.2:1489718-1489737 None:intergenic 15.0%
!!! TAATCATCAAAAACAAATTT+TGG + chr8.2:1489719-1489738 None:intergenic 15.0%
!!! TGTATATATTTTTTTGTGTT+TGG - chr8.2:1489006-1489025 MS.gene68871:intron 15.0%
!! AAATATATACACATAGATCA+TGG + chr8.2:1488997-1489016 None:intergenic 20.0%
!!! AAATCGCATTTTAAAATAAG+AGG + chr8.2:1488889-1488908 None:intergenic 20.0%
!!! TTGTGTTATTAATTTTAGGA+AGG - chr8.2:1489041-1489060 MS.gene68871:intron 20.0%
! ATTAGTACTATACCTCAATT+TGG + chr8.2:1489386-1489405 None:intergenic 25.0%
! CCTCAAAATTCGTAATATTA+CGG - chr8.2:1489458-1489477 MS.gene68871:intron 25.0%
! TATTTGAAGAAAGTCTTTCA+TGG - chr8.2:1489150-1489169 MS.gene68871:CDS 25.0%
! TGGATTATAAAATGATGCTA+TGG + chr8.2:1489627-1489646 None:intergenic 25.0%
! TTACGATATGATATCTATTG+TGG - chr8.2:1488951-1488970 MS.gene68871:intron 25.0%
!! ATAGCATCATTTTATAATCC+AGG - chr8.2:1489626-1489645 MS.gene68871:intron 25.0%
!! TAATCAAAGGGTATAACTAT+AGG - chr8.2:1489402-1489421 MS.gene68871:CDS 25.0%
!!! AAACAAATTTTGGGTAAACT+TGG + chr8.2:1489709-1489728 None:intergenic 25.0%
ATCTCTGATATGTTAGAGTT+AGG + chr8.2:1488809-1488828 None:intergenic 30.0%
GAGGTATAGTACTAATCAAA+GGG - chr8.2:1489390-1489409 MS.gene68871:CDS 30.0%
GATTTGAACCTTCATATTGT+GGG - chr8.2:1488904-1488923 MS.gene68871:CDS 30.0%
TGAGGTATAGTACTAATCAA+AGG - chr8.2:1489389-1489408 MS.gene68871:CDS 30.0%
TTAAAACAGGTGATTACCAA+TGG - chr8.2:1489545-1489564 MS.gene68871:intron 30.0%
TTTACTATTCCAAGATGACA+AGG - chr8.2:1489278-1489297 MS.gene68871:CDS 30.0%
! AGAAATCAATGACTTGGATT+GGG - chr8.2:1488757-1488776 MS.gene68871:CDS 30.0%
! CCGTAATATTACGAATTTTG+AGG + chr8.2:1489461-1489480 None:intergenic 30.0%
! CTAACTTTGGTTCCAAAATT+TGG + chr8.2:1489186-1489205 None:intergenic 30.0%
! TACATTTTCCCACAATATGA+AGG + chr8.2:1488915-1488934 None:intergenic 30.0%
!! TAATTTTAGGAAGGCAATGA+AGG - chr8.2:1489050-1489069 MS.gene68871:intron 30.0%
AAAGAAATGGTAGCAAGCAA+AGG - chr8.2:1488716-1488735 MS.gene68871:CDS 35.0%
AAAGTCTTTCATGGATCCAA+GGG - chr8.2:1489159-1489178 MS.gene68871:CDS 35.0%
ATAACAATGGAATGACGCAT+TGG + chr8.2:1489351-1489370 None:intergenic 35.0%
ATATGTTAGAGTTAGGAAGG+TGG + chr8.2:1488802-1488821 None:intergenic 35.0%
CATTCCATTGTTATCAACCT+TGG - chr8.2:1489357-1489376 MS.gene68871:CDS 35.0%
CGATTTGAACCTTCATATTG+TGG - chr8.2:1488903-1488922 MS.gene68871:CDS 35.0%
CTGATATGTTAGAGTTAGGA+AGG + chr8.2:1488805-1488824 None:intergenic 35.0%
CTTCTGTTTGAGCAATTACA+CGG + chr8.2:1489592-1489611 None:intergenic 35.0%
GATTACATGAAACTCTATGC+TGG - chr8.2:1489734-1489753 MS.gene68871:CDS 35.0%
GTGTAATTGCTCAAACAGAA+GGG - chr8.2:1489591-1489610 MS.gene68871:intron 35.0%
TCAGTCAGAAATCAATGACT+TGG - chr8.2:1488751-1488770 MS.gene68871:CDS 35.0%
TGTAGTCATGATCAAGATCA+AGG + chr8.2:1488832-1488851 None:intergenic 35.0%
TTGATCTTGATCATGACTAC+AGG - chr8.2:1488831-1488850 MS.gene68871:CDS 35.0%
! AGAAAACTACAAGAAGCGTA+TGG - chr8.2:1488682-1488701 MS.gene68871:CDS 35.0%
! CAGAAATCAATGACTTGGAT+TGG - chr8.2:1488756-1488775 MS.gene68871:CDS 35.0%
! GTGGGAAAATGTAGTTGATA+CGG - chr8.2:1488922-1488941 MS.gene68871:intron 35.0%
ATACCTCAATTTGGTCACCA+AGG + chr8.2:1489377-1489396 None:intergenic 40.0%
CAATCCATTGGCCATCTTTA+AGG + chr8.2:1489320-1489339 None:intergenic 40.0%
CACACTCTTGTATTTGCCAT+TGG + chr8.2:1489564-1489583 None:intergenic 40.0%
CACATCTAATTCCTTCACCA+AGG + chr8.2:1489681-1489700 None:intergenic 40.0%
CCTAAGCCAGATCTTATCAA+AGG - chr8.2:1489222-1489241 MS.gene68871:CDS 40.0%
CGTGTAATTGCTCAAACAGA+AGG - chr8.2:1489590-1489609 MS.gene68871:intron 40.0%
CTATTCCAAGATGACAAGGT+TGG - chr8.2:1489282-1489301 MS.gene68871:CDS 40.0%
CTGAGTCCTTTGATAAGATC+TGG + chr8.2:1489231-1489250 None:intergenic 40.0%
GAAAGTCTTTCATGGATCCA+AGG - chr8.2:1489158-1489177 MS.gene68871:CDS 40.0%
GCCTTCATAGCTTCAAATCT+TGG + chr8.2:1489782-1489801 None:intergenic 40.0%
GGAGCAAAGGTTCAAAGAAA+TGG - chr8.2:1488703-1488722 MS.gene68871:CDS 40.0%
TATGGGAATGTTGGATTCCA+TGG + chr8.2:1489804-1489823 None:intergenic 40.0%
! AGAATCTTGGGCTAGAGAAA+GGG - chr8.2:1489127-1489146 MS.gene68871:CDS 40.0%
! AGCTTCAAATCTTGGCTCTT+TGG + chr8.2:1489774-1489793 None:intergenic 40.0%
! ATAAGATCTGGCTTAGGACA+AGG + chr8.2:1489219-1489238 None:intergenic 40.0%
! ATTTGAAGCTATGAAGGCCA+TGG - chr8.2:1489784-1489803 MS.gene68871:CDS 40.0%
! CCTTTGATAAGATCTGGCTT+AGG + chr8.2:1489225-1489244 None:intergenic 40.0%
! GCCAAGATTTGAAGCTATGA+AGG - chr8.2:1489778-1489797 MS.gene68871:CDS 40.0%
!! ACTTGCTGTGTGAGAATCTT+GGG - chr8.2:1489115-1489134 MS.gene68871:CDS 40.0%
!! GTCACCAAGGTTGATAACAA+TGG + chr8.2:1489364-1489383 None:intergenic 40.0%
ACAATGGAATGACGCATTGG+TGG + chr8.2:1489348-1489367 None:intergenic 45.0%
AGCTCCTTAAAGATGGCCAA+TGG - chr8.2:1489313-1489332 MS.gene68871:CDS 45.0%
AGGAGGGTAGTTGCTAACTT+TGG + chr8.2:1489199-1489218 None:intergenic 45.0%
GAGATTACTGCATCATTGCC+TGG + chr8.2:1489647-1489666 None:intergenic 45.0%
GGACTTCAGCTCCTTAAAGA+TGG - chr8.2:1489306-1489325 MS.gene68871:CDS 45.0%
GGCAATGAAGGAATTTGCAG+TGG - chr8.2:1489062-1489081 MS.gene68871:intron 45.0%
GGTTCCAAAATTTGGTCCCT+TGG + chr8.2:1489178-1489197 None:intergenic 45.0%
TGCAGTGGAACTTGAGAAAC+TGG - chr8.2:1489077-1489096 MS.gene68871:intron 45.0%
TTCCAAGATGACAAGGTTGG+TGG - chr8.2:1489285-1489304 MS.gene68871:CDS 45.0%
TTGGTGGGACATCAATCCAT+TGG + chr8.2:1489332-1489351 None:intergenic 45.0%
! ACAAGAAGCGTATGGAGCAA+AGG - chr8.2:1488690-1488709 MS.gene68871:CDS 45.0%
! CAAATCTTGGCTCTTTGGCT+TGG + chr8.2:1489769-1489788 None:intergenic 45.0%
! CAACCTTGGTGACCAAATTG+AGG - chr8.2:1489371-1489390 MS.gene68871:CDS 45.0%
! CAATGGAATGACGCATTGGT+GGG + chr8.2:1489347-1489366 None:intergenic 45.0%
! GAGAATCTTGGGCTAGAGAA+AGG - chr8.2:1489126-1489145 MS.gene68871:CDS 45.0%
! GGATCCAAGGGACCAAATTT+TGG - chr8.2:1489171-1489190 MS.gene68871:CDS 45.0%
!! GACTTGCTGTGTGAGAATCT+TGG - chr8.2:1489114-1489133 MS.gene68871:CDS 45.0%
!! GCTCTTTGGCTTGGAATTTG+AGG + chr8.2:1489760-1489779 None:intergenic 45.0%
GTCCACCAACCTTGTCATCT+TGG + chr8.2:1489290-1489309 None:intergenic 50.0%
TATGCCACCAGCATCTGTGT+GGG + chr8.2:1489256-1489275 None:intergenic 50.0%
TTATGCCACCAGCATCTGTG+TGG + chr8.2:1489257-1489276 None:intergenic 50.0%
! AGATCTGGCTTAGGACAAGG+AGG + chr8.2:1489216-1489235 None:intergenic 50.0%
! GATCTGGCTTAGGACAAGGA+GGG + chr8.2:1489215-1489234 None:intergenic 50.0%
! GGCAGTTGGTATGGGAATGT+TGG + chr8.2:1489813-1489832 None:intergenic 50.0%
AATCTCTCCTGCAGCAGCCT+TGG - chr8.2:1489661-1489680 MS.gene68871:CDS 55.0%
AGAGCCCACACAGATGCTGG+TGG - chr8.2:1489249-1489268 MS.gene68871:CDS 60.0%
CTCAGAGCCCACACAGATGC+TGG - chr8.2:1489246-1489265 MS.gene68871:CDS 60.0%
TCCTGCAGCAGCCTTGGTGA+AGG - chr8.2:1489667-1489686 MS.gene68871:CDS 60.0%
TCCTTCACCAAGGCTGCTGC+AGG + chr8.2:1489671-1489690 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 1488656 1489835 1488656 ID=MS.gene68871
chr8.2 mRNA 1488656 1489835 1488656 ID=MS.gene68871.t1;Parent=MS.gene68871
chr8.2 exon 1489639 1489835 1489639 ID=MS.gene68871.t1.exon1;Parent=MS.gene68871.t1
chr8.2 CDS 1489639 1489835 1489639 ID=cds.MS.gene68871.t1;Parent=MS.gene68871.t1
chr8.2 exon 1489099 1489432 1489099 ID=MS.gene68871.t1.exon2;Parent=MS.gene68871.t1
chr8.2 CDS 1489099 1489432 1489099 ID=cds.MS.gene68871.t1;Parent=MS.gene68871.t1
chr8.2 exon 1488656 1488937 1488656 ID=MS.gene68871.t1.exon3;Parent=MS.gene68871.t1
chr8.2 CDS 1488656 1488937 1488656 ID=cds.MS.gene68871.t1;Parent=MS.gene68871.t1
Gene Sequence

>MS.gene68871

ATGGACAAAGTTGAGAAGCTGACAAAAGAAAACTACAAGAAGCGTATGGAGCAAAGGTTCAAAGAAATGGTAGCAAGCAAAGGTTTAGAGTTTGCTCAGTCAGAAATCAATGACTTGGATTGGGAAAGCACTTTCTTTTTGCGCCACCTTCCTAACTCTAACATATCAGAGATCCTTGATCTTGATCATGACTACAGGTTAATATTTATTCTCAACATAAATCATGCACACCTCTTATTTTAAAATGCGATTTGAACCTTCATATTGTGGGAAAATGTAGTTGATACGGTCGAAATTACGATATGATATCTATTGTGGTTGCATAATGCAATTTTAAACCATGATCTATGTGTATATATTTTTTTGTGTTTGGTCACATAATTTTTTGTGTTATTAATTTTAGGAAGGCAATGAAGGAATTTGCAGTGGAACTTGAGAAACTGGCTGAGCTACTTCTTGACTTGCTGTGTGAGAATCTTGGGCTAGAGAAAGGGTATTTGAAGAAAGTCTTTCATGGATCCAAGGGACCAAATTTTGGAACCAAAGTTAGCAACTACCCTCCTTGTCCTAAGCCAGATCTTATCAAAGGACTCAGAGCCCACACAGATGCTGGTGGCATAATTTTACTATTCCAAGATGACAAGGTTGGTGGACTTCAGCTCCTTAAAGATGGCCAATGGATTGATGTCCCACCAATGCGTCATTCCATTGTTATCAACCTTGGTGACCAAATTGAGGTATAGTACTAATCAAAGGGTATAACTATAGGTTTGAAATCGTGTTTGCGATGTTGTTGTAGAGACCTCAAAATTCGTAATATTACGGCTGCAATATAAAACTGTCTGCTAGTTTATGCATCATTAATTTTCTTCATTAATATAATACTTTGTTAAAACAGGTGATTACCAATGGCAAATACAAGAGTGTGTTGCACCGTGTAATTGCTCAAACAGAAGGGAACAGAATGTCCATAGCATCATTTTATAATCCAGGCAATGATGCAGTAATCTCTCCTGCAGCAGCCTTGGTGAAGGAATTAGATGTGACAAACCAAGTTTACCCAAAATTTGTTTTTGATGATTACATGAAACTCTATGCTGGCCTCAAATTCCAAGCCAAAGAGCCAAGATTTGAAGCTATGAAGGCCATGGAATCCAACATTCCCATACCAACTGCCTAA

Protein sequence

>MS.gene68871.t1

MDKVEKLTKENYKKRMEQRFKEMVASKGLEFAQSEINDLDWESTFFLRHLPNSNISEILDLDHDYRKAMKEFAVELEKLAELLLDLLCENLGLEKGYLKKVFHGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVGGLQLLKDGQWIDVPPMRHSIVINLGDQIEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGNDAVISPAAALVKELDVTNQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMESNIPIPTA