Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898490 | XP_039682486.1 | 58.228 | 237 | 62 | 4 | 1 | 208 | 1 | 229 | 3.23e-74 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898490 | sp|P42849|UMEC_ARMRU | 45.098 | 102 | 47 | 2 | 25 | 118 | 1 | 101 | 2.00e-22 | 91.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898490 | A0A396HJS2 | 67.539 | 191 | 37 | 2 | 1 | 166 | 1 | 191 | 5.85e-73 | 241 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008700 | Msa0898490 | 0.803024 | 4.245649e-49 | -8.615850e-47 |
| Msa0014970 | Msa0898490 | 0.830400 | 2.999461e-55 | -8.615850e-47 |
| Msa0033190 | Msa0898490 | 0.832523 | 9.006270e-56 | -8.615850e-47 |
| Msa0049670 | Msa0898490 | 0.802063 | 6.701956e-49 | -8.615850e-47 |
| Msa0053260 | Msa0898490 | 0.802063 | 6.699943e-49 | -8.615850e-47 |
| Msa0067820 | Msa0898490 | 0.819242 | 1.287357e-52 | -8.615850e-47 |
| Msa0070580 | Msa0898490 | 0.818606 | 1.795584e-52 | -8.615850e-47 |
| Msa0079840 | Msa0898490 | 0.829068 | 6.330677e-55 | -8.615850e-47 |
| Msa0082340 | Msa0898490 | 0.810478 | 1.129712e-50 | -8.615850e-47 |
| Msa0090350 | Msa0898490 | 0.812332 | 4.471154e-51 | -8.615850e-47 |
| Msa0098750 | Msa0898490 | 0.816926 | 4.298372e-52 | -8.615850e-47 |
| Msa0098960 | Msa0898490 | 0.805440 | 1.333783e-49 | -8.615850e-47 |
| Msa0108500 | Msa0898490 | 0.829235 | 5.767374e-55 | -8.615850e-47 |
| Msa0110350 | Msa0898490 | 0.801071 | 1.070627e-48 | -8.615850e-47 |
| Msa0111000 | Msa0898490 | 0.815094 | 1.102601e-51 | -8.615850e-47 |
| Msa0112800 | Msa0898490 | 0.806887 | 6.612683e-50 | -8.615850e-47 |
| Msa0114960 | Msa0898490 | 0.842091 | 3.194552e-58 | -8.615850e-47 |
| Msa0606380 | Msa0898490 | 0.824257 | 8.903128e-54 | -8.615850e-47 |
| Msa0606680 | Msa0898490 | 0.812767 | 3.592422e-51 | -8.615850e-47 |
| Msa0607620 | Msa0898490 | 0.803476 | 3.422874e-49 | -8.615850e-47 |
| Msa0614060 | Msa0898490 | 0.827276 | 1.710461e-54 | -8.615850e-47 |
| Msa0618260 | Msa0898490 | 0.801158 | 1.027419e-48 | -8.615850e-47 |
| Msa0623350 | Msa0898490 | 0.808616 | 2.837060e-50 | -8.615850e-47 |
| Msa0624260 | Msa0898490 | 0.808338 | 3.253772e-50 | -8.615850e-47 |
| Msa0624360 | Msa0898490 | 0.820347 | 7.198456e-53 | -8.615850e-47 |
| Msa0625550 | Msa0898490 | 0.803693 | 3.085939e-49 | -8.615850e-47 |
| Msa0625820 | Msa0898490 | 0.802791 | 4.744327e-49 | -8.615850e-47 |
| Msa0638550 | Msa0898490 | 0.820237 | 7.625580e-53 | -8.615850e-47 |
| Msa0639880 | Msa0898490 | 0.812475 | 4.161813e-51 | -8.615850e-47 |
| Msa0640780 | Msa0898490 | 0.843154 | 1.668503e-58 | -8.615850e-47 |
| Msa0642150 | Msa0898490 | 0.814036 | 1.890391e-51 | -8.615850e-47 |
| Msa0644610 | Msa0898490 | 0.835597 | 1.529584e-56 | -8.615850e-47 |
| Msa0648200 | Msa0898490 | 0.803816 | 2.910109e-49 | -8.615850e-47 |
| Msa0656570 | Msa0898490 | 0.801620 | 8.262816e-49 | -8.615850e-47 |
| Msa0657820 | Msa0898490 | 0.822281 | 2.576026e-53 | -8.615850e-47 |
| Msa0659360 | Msa0898490 | 0.804286 | 2.323075e-49 | -8.615850e-47 |
| Msa0660160 | Msa0898490 | 0.816108 | 6.555550e-52 | -8.615850e-47 |
| Msa0662670 | Msa0898490 | 0.809404 | 1.924494e-50 | -8.615850e-47 |
| Msa0663580 | Msa0898490 | 0.806981 | 6.315257e-50 | -8.615850e-47 |
| Msa0663690 | Msa0898490 | 0.800721 | 1.261930e-48 | -8.615850e-47 |
| Msa0665010 | Msa0898490 | 0.809545 | 1.794509e-50 | -8.615850e-47 |
| Msa0665040 | Msa0898490 | 0.814062 | 1.865414e-51 | -8.615850e-47 |
| Msa0668000 | Msa0898490 | 0.820717 | 5.918622e-53 | -8.615850e-47 |
| Msa0680550 | Msa0898490 | 0.802338 | 5.882204e-49 | -8.615850e-47 |
| Msa0687320 | Msa0898490 | 0.818886 | 1.551186e-52 | -8.615850e-47 |
| Msa0691180 | Msa0898490 | 0.821761 | 3.399853e-53 | -8.615850e-47 |
| Msa0697230 | Msa0898490 | 0.839494 | 1.532356e-57 | -8.615850e-47 |
| Msa0700870 | Msa0898490 | 0.816722 | 4.775447e-52 | -8.615850e-47 |
| Msa0700930 | Msa0898490 | 0.815752 | 7.871148e-52 | -8.615850e-47 |
| Msa0703620 | Msa0898490 | 0.804122 | 2.513515e-49 | -8.615850e-47 |
| Msa0708870 | Msa0898490 | 0.804137 | 2.495922e-49 | -8.615850e-47 |
| Msa0712670 | Msa0898490 | 0.812303 | 4.538448e-51 | -8.615850e-47 |
| Msa0719160 | Msa0898490 | 0.810801 | 9.619126e-51 | -8.615850e-47 |
| Msa0726000 | Msa0898490 | 0.816563 | 5.184937e-52 | -8.615850e-47 |
| Msa0729590 | Msa0898490 | 0.804379 | 2.222123e-49 | -8.615850e-47 |
| Msa0729740 | Msa0898490 | 0.816665 | 4.918111e-52 | -8.615850e-47 |
| Msa0741710 | Msa0898490 | 0.849295 | 3.543821e-60 | -8.615850e-47 |
| Msa0761930 | Msa0898490 | 0.816334 | 5.833863e-52 | -8.615850e-47 |
| Msa0766910 | Msa0898490 | 0.807817 | 4.199553e-50 | -8.615850e-47 |
| Msa0768240 | Msa0898490 | 0.806562 | 7.744522e-50 | -8.615850e-47 |
| Msa0769910 | Msa0898490 | 0.803441 | 3.481405e-49 | -8.615850e-47 |
| Msa0770050 | Msa0898490 | 0.801380 | 9.254730e-49 | -8.615850e-47 |
| Msa0770540 | Msa0898490 | 0.818334 | 2.069904e-52 | -8.615850e-47 |
| Msa0772160 | Msa0898490 | 0.811561 | 6.581798e-51 | -8.615850e-47 |
| Msa0784770 | Msa0898490 | 0.825662 | 4.147579e-54 | -8.615850e-47 |
| Msa0785670 | Msa0898490 | 0.825596 | 4.300630e-54 | -8.615850e-47 |
| Msa0791170 | Msa0898490 | 0.800736 | 1.253308e-48 | -8.615850e-47 |
| Msa0816860 | Msa0898490 | 0.842232 | 2.932845e-58 | -8.615850e-47 |
| Msa0822800 | Msa0898490 | 0.801350 | 9.386149e-49 | -8.615850e-47 |
| Msa0829250 | Msa0898490 | 0.800687 | 1.282022e-48 | -8.615850e-47 |
| Msa0840450 | Msa0898490 | 0.821934 | 3.101124e-53 | -8.615850e-47 |
| Msa0121480 | Msa0898490 | 0.813590 | 2.370375e-51 | -8.615850e-47 |
| Msa0127060 | Msa0898490 | 0.808873 | 2.500044e-50 | -8.615850e-47 |
| Msa0135400 | Msa0898490 | 0.809603 | 1.744322e-50 | -8.615850e-47 |
| Msa0138380 | Msa0898490 | 0.807378 | 5.204190e-50 | -8.615850e-47 |
| Msa0140870 | Msa0898490 | 0.805855 | 1.091355e-49 | -8.615850e-47 |
| Msa0147800 | Msa0898490 | 0.800157 | 1.644402e-48 | -8.615850e-47 |
| Msa0152910 | Msa0898490 | -0.808441 | 3.093027e-50 | -8.615850e-47 |
| Msa0156780 | Msa0898490 | 0.820131 | 8.066697e-53 | -8.615850e-47 |
| Msa0164630 | Msa0898490 | 0.802533 | 5.361605e-49 | -8.615850e-47 |
| Msa0165820 | Msa0898490 | 0.817833 | 2.685678e-52 | -8.615850e-47 |
| Msa0166580 | Msa0898490 | 0.813867 | 2.059599e-51 | -8.615850e-47 |
| Msa0170690 | Msa0898490 | 0.803039 | 4.215619e-49 | -8.615850e-47 |
| Msa0170730 | Msa0898490 | 0.824670 | 7.116720e-54 | -8.615850e-47 |
| Msa0174800 | Msa0898490 | 0.811709 | 6.114200e-51 | -8.615850e-47 |
| Msa0184030 | Msa0898490 | 0.802907 | 4.490461e-49 | -8.615850e-47 |
| Msa0184850 | Msa0898490 | 0.826908 | 2.094969e-54 | -8.615850e-47 |
| Msa0186380 | Msa0898490 | 0.801492 | 8.778282e-49 | -8.615850e-47 |
| Msa0194420 | Msa0898490 | 0.828416 | 9.102889e-55 | -8.615850e-47 |
| Msa0194870 | Msa0898490 | 0.800036 | 1.740182e-48 | -8.615850e-47 |
| Msa0196620 | Msa0898490 | 0.811622 | 6.384171e-51 | -8.615850e-47 |
| Msa0198140 | Msa0898490 | 0.801263 | 9.780597e-49 | -8.615850e-47 |
| Msa0198220 | Msa0898490 | 0.806449 | 8.181151e-50 | -8.615850e-47 |
| Msa0207150 | Msa0898490 | 0.836059 | 1.168020e-56 | -8.615850e-47 |
| Msa0208710 | Msa0898490 | 0.815005 | 1.153669e-51 | -8.615850e-47 |
| Msa0209370 | Msa0898490 | 0.809396 | 1.932228e-50 | -8.615850e-47 |
| Msa0209590 | Msa0898490 | 0.821302 | 4.339767e-53 | -8.615850e-47 |
| Msa0212950 | Msa0898490 | 0.801522 | 8.653027e-49 | -8.615850e-47 |
| Msa0224980 | Msa0898490 | 0.818326 | 2.078196e-52 | -8.615850e-47 |
| Msa0225030 | Msa0898490 | 0.824926 | 6.193055e-54 | -8.615850e-47 |
| Msa0226580 | Msa0898490 | 0.802682 | 4.997338e-49 | -8.615850e-47 |
| Msa0238530 | Msa0898490 | 0.808019 | 3.803245e-50 | -8.615850e-47 |
| Msa0365350 | Msa0898490 | 0.836409 | 9.519480e-57 | -8.615850e-47 |
| Msa0367310 | Msa0898490 | 0.828160 | 1.048827e-54 | -8.615850e-47 |
| Msa0368450 | Msa0898490 | 0.802249 | 6.137071e-49 | -8.615850e-47 |
| Msa0369080 | Msa0898490 | 0.808509 | 2.991554e-50 | -8.615850e-47 |
| Msa0379890 | Msa0898490 | 0.839898 | 1.202712e-57 | -8.615850e-47 |
| Msa0381990 | Msa0898490 | 0.820620 | 6.230109e-53 | -8.615850e-47 |
| Msa0382060 | Msa0898490 | 0.802020 | 6.838175e-49 | -8.615850e-47 |
| Msa0384150 | Msa0898490 | 0.802075 | 6.664006e-49 | -8.615850e-47 |
| Msa0385870 | Msa0898490 | 0.815003 | 1.154792e-51 | -8.615850e-47 |
| Msa0404880 | Msa0898490 | 0.840883 | 6.648278e-58 | -8.615850e-47 |
| Msa0411260 | Msa0898490 | 0.856583 | 2.916822e-62 | -8.615850e-47 |
| Msa0416530 | Msa0898490 | 0.804755 | 1.855210e-49 | -8.615850e-47 |
| Msa0416880 | Msa0898490 | 0.802053 | 6.733435e-49 | -8.615850e-47 |
| Msa0418790 | Msa0898490 | 0.805261 | 1.454193e-49 | -8.615850e-47 |
| Msa0420280 | Msa0898490 | 0.843190 | 1.631831e-58 | -8.615850e-47 |
| Msa0421100 | Msa0898490 | 0.808191 | 3.495770e-50 | -8.615850e-47 |
| Msa0431310 | Msa0898490 | 0.803448 | 3.469467e-49 | -8.615850e-47 |
| Msa0431940 | Msa0898490 | 0.808974 | 2.378830e-50 | -8.615850e-47 |
| Msa0440220 | Msa0898490 | 0.807718 | 4.407100e-50 | -8.615850e-47 |
| Msa0447830 | Msa0898490 | 0.803938 | 2.745234e-49 | -8.615850e-47 |
| Msa0450230 | Msa0898490 | 0.805158 | 1.528149e-49 | -8.615850e-47 |
| Msa0450890 | Msa0898490 | 0.817336 | 3.475772e-52 | -8.615850e-47 |
| Msa0459970 | Msa0898490 | 0.805397 | 1.361349e-49 | -8.615850e-47 |
| Msa0461620 | Msa0898490 | 0.801758 | 7.740341e-49 | -8.615850e-47 |
| Msa0463030 | Msa0898490 | 0.803077 | 4.141381e-49 | -8.615850e-47 |
| Msa0472870 | Msa0898490 | 0.809137 | 2.195439e-50 | -8.615850e-47 |
| Msa0473320 | Msa0898490 | 0.808468 | 3.051846e-50 | -8.615850e-47 |
| Msa0474220 | Msa0898490 | 0.816549 | 5.221716e-52 | -8.615850e-47 |
| Msa0475700 | Msa0898490 | 0.813225 | 2.851285e-51 | -8.615850e-47 |
| Msa0476490 | Msa0898490 | 0.805264 | 1.451457e-49 | -8.615850e-47 |
| Msa0240460 | Msa0898490 | 0.806982 | 6.313296e-50 | -8.615850e-47 |
| Msa0240630 | Msa0898490 | 0.803802 | 2.929090e-49 | -8.615850e-47 |
| Msa0243160 | Msa0898490 | 0.845718 | 3.408871e-59 | -8.615850e-47 |
| Msa0244320 | Msa0898490 | 0.825264 | 5.154435e-54 | -8.615850e-47 |
| Msa0249670 | Msa0898490 | 0.853037 | 3.113430e-61 | -8.615850e-47 |
| Msa0260930 | Msa0898490 | 0.829149 | 6.049450e-55 | -8.615850e-47 |
| Msa0263520 | Msa0898490 | 0.821350 | 4.230971e-53 | -8.615850e-47 |
| Msa0266150 | Msa0898490 | 0.800505 | 1.396435e-48 | -8.615850e-47 |
| Msa0269610 | Msa0898490 | 0.812863 | 3.423145e-51 | -8.615850e-47 |
| Msa0276030 | Msa0898490 | 0.810414 | 1.166647e-50 | -8.615850e-47 |
| Msa0278340 | Msa0898490 | 0.803191 | 3.921126e-49 | -8.615850e-47 |
| Msa0292150 | Msa0898490 | 0.805830 | 1.104499e-49 | -8.615850e-47 |
| Msa0297320 | Msa0898490 | 0.809893 | 1.510790e-50 | -8.615850e-47 |
| Msa0298590 | Msa0898490 | 0.806536 | 7.841864e-50 | -8.615850e-47 |
| Msa0302020 | Msa0898490 | 0.826094 | 3.275527e-54 | -8.615850e-47 |
| Msa0317820 | Msa0898490 | 0.801445 | 8.972214e-49 | -8.615850e-47 |
| Msa0323790 | Msa0898490 | 0.800194 | 1.615702e-48 | -8.615850e-47 |
| Msa0327870 | Msa0898490 | 0.809543 | 1.796198e-50 | -8.615850e-47 |
| Msa0330770 | Msa0898490 | 0.816258 | 6.068437e-52 | -8.615850e-47 |
| Msa0331070 | Msa0898490 | 0.815154 | 1.069014e-51 | -8.615850e-47 |
| Msa0335860 | Msa0898490 | 0.833194 | 6.132967e-56 | -8.615850e-47 |
| Msa0336730 | Msa0898490 | 0.821697 | 3.517387e-53 | -8.615850e-47 |
| Msa0338670 | Msa0898490 | 0.825812 | 3.822219e-54 | -8.615850e-47 |
| Msa0339340 | Msa0898490 | 0.832317 | 1.012772e-55 | -8.615850e-47 |
| Msa0355630 | Msa0898490 | 0.800866 | 1.178635e-48 | -8.615850e-47 |
| Msa0358720 | Msa0898490 | 0.813406 | 2.601259e-51 | -8.615850e-47 |
| Msa0363090 | Msa0898490 | 0.818780 | 1.639574e-52 | -8.615850e-47 |
| Msa0483410 | Msa0898490 | 0.800059 | 1.721060e-48 | -8.615850e-47 |
| Msa0486850 | Msa0898490 | 0.850821 | 1.325249e-60 | -8.615850e-47 |
| Msa0486870 | Msa0898490 | 0.842993 | 1.840853e-58 | -8.615850e-47 |
| Msa0487860 | Msa0898490 | 0.824274 | 8.820433e-54 | -8.615850e-47 |
| Msa0491160 | Msa0898490 | 0.812918 | 3.328081e-51 | -8.615850e-47 |
| Msa0504640 | Msa0898490 | 0.828853 | 7.134496e-55 | -8.615850e-47 |
| Msa0507960 | Msa0898490 | 0.818647 | 1.757230e-52 | -8.615850e-47 |
| Msa0508620 | Msa0898490 | 0.804549 | 2.047966e-49 | -8.615850e-47 |
| Msa0508660 | Msa0898490 | 0.811036 | 8.557367e-51 | -8.615850e-47 |
| Msa0508770 | Msa0898490 | 0.808247 | 3.402163e-50 | -8.615850e-47 |
| Msa0515400 | Msa0898490 | 0.835214 | 1.911671e-56 | -8.615850e-47 |
| Msa0515420 | Msa0898490 | 0.804367 | 2.234605e-49 | -8.615850e-47 |
| Msa0515830 | Msa0898490 | 0.802914 | 4.475151e-49 | -8.615850e-47 |
| Msa0521190 | Msa0898490 | 0.805036 | 1.620641e-49 | -8.615850e-47 |
| Msa0523400 | Msa0898490 | 0.802799 | 4.725372e-49 | -8.615850e-47 |
| Msa0524080 | Msa0898490 | 0.802139 | 6.464023e-49 | -8.615850e-47 |
| Msa0532750 | Msa0898490 | 0.813790 | 2.141597e-51 | -8.615850e-47 |
| Msa0539900 | Msa0898490 | 0.835354 | 1.761631e-56 | -8.615850e-47 |
| Msa0552660 | Msa0898490 | 0.807389 | 5.177830e-50 | -8.615850e-47 |
| Msa0555510 | Msa0898490 | 0.807365 | 5.237241e-50 | -8.615850e-47 |
| Msa0558220 | Msa0898490 | 0.844164 | 8.954625e-59 | -8.615850e-47 |
| Msa0558800 | Msa0898490 | 0.842244 | 2.910910e-58 | -8.615850e-47 |
| Msa0559640 | Msa0898490 | 0.829108 | 6.191016e-55 | -8.615850e-47 |
| Msa0560010 | Msa0898490 | 0.853290 | 2.634348e-61 | -8.615850e-47 |
| Msa0562740 | Msa0898490 | 0.808121 | 3.617725e-50 | -8.615850e-47 |
| Msa0564000 | Msa0898490 | 0.808609 | 2.846772e-50 | -8.615850e-47 |
| Msa0564580 | Msa0898490 | 0.830422 | 2.964052e-55 | -8.615850e-47 |
| Msa0565930 | Msa0898490 | 0.814819 | 1.268952e-51 | -8.615850e-47 |
| Msa0567360 | Msa0898490 | 0.809873 | 1.525733e-50 | -8.615850e-47 |
| Msa0567420 | Msa0898490 | 0.800851 | 1.187245e-48 | -8.615850e-47 |
| Msa0567490 | Msa0898490 | 0.800415 | 1.456821e-48 | -8.615850e-47 |
| Msa0575970 | Msa0898490 | 0.819827 | 9.467837e-53 | -8.615850e-47 |
| Msa0577960 | Msa0898490 | 0.806497 | 7.994338e-50 | -8.615850e-47 |
| Msa0585810 | Msa0898490 | 0.809072 | 2.266473e-50 | -8.615850e-47 |
| Msa0587060 | Msa0898490 | 0.806711 | 7.205322e-50 | -8.615850e-47 |
| Msa0589930 | Msa0898490 | 0.808584 | 2.882657e-50 | -8.615850e-47 |
| Msa0591570 | Msa0898490 | 0.802302 | 5.983083e-49 | -8.615850e-47 |
| Msa0597370 | Msa0898490 | 0.801993 | 6.927037e-49 | -8.615850e-47 |
| Msa0857080 | Msa0898490 | 0.811366 | 7.257915e-51 | -8.615850e-47 |
| Msa0868040 | Msa0898490 | 0.819640 | 1.044371e-52 | -8.615850e-47 |
| Msa0873070 | Msa0898490 | 0.801577 | 8.434079e-49 | -8.615850e-47 |
| Msa0880310 | Msa0898490 | 0.820995 | 5.108873e-53 | -8.615850e-47 |
| Msa0880370 | Msa0898490 | 0.810394 | 1.178143e-50 | -8.615850e-47 |
| Msa0898410 | Msa0898490 | 0.902062 | 1.422729e-78 | -8.615850e-47 |
| Msa0898490 | Msa0906100 | 0.801771 | 7.694737e-49 | -8.615850e-47 |
| Msa0898490 | Msa0906150 | 0.802128 | 6.498683e-49 | -8.615850e-47 |
| Msa0898490 | Msa0911440 | 0.804199 | 2.422158e-49 | -8.615850e-47 |
| Msa0898490 | Msa0912110 | 0.828130 | 1.066938e-54 | -8.615850e-47 |
| Msa0898490 | Msa0927830 | 0.810909 | 9.117156e-51 | -8.615850e-47 |
| Msa0898490 | Msa0927890 | 0.805844 | 1.097253e-49 | -8.615850e-47 |
| Msa0898490 | Msa0928840 | 0.813264 | 2.794786e-51 | -8.615850e-47 |
| Msa0898490 | Msa0933220 | 0.811037 | 8.551952e-51 | -8.615850e-47 |
| Msa0898490 | Msa0941320 | 0.809053 | 2.288675e-50 | -8.615850e-47 |
| Msa0898490 | Msa0948820 | 0.835098 | 2.044612e-56 | -8.615850e-47 |
| Msa0898490 | Msa0949850 | 0.801217 | 9.993926e-49 | -8.615850e-47 |
| Msa0898490 | Msa0967250 | 0.820458 | 6.785664e-53 | -8.615850e-47 |
| Msa0898490 | Msa0974410 | 0.801520 | 8.662055e-49 | -8.615850e-47 |
| Msa0898490 | Msa0978290 | 0.826004 | 3.440543e-54 | -8.615850e-47 |
| Msa0898490 | Msa0998940 | 0.817634 | 2.978907e-52 | -8.615850e-47 |
| Msa0898490 | Msa1016450 | 0.809281 | 2.044724e-50 | -8.615850e-47 |
| Msa0898490 | Msa1020160 | 0.823478 | 1.355581e-53 | -8.615850e-47 |
| Msa0898490 | Msa1031220 | 0.805282 | 1.439101e-49 | -8.615850e-47 |
| Msa0898490 | Msa1031620 | 0.805697 | 1.177634e-49 | -8.615850e-47 |
| Msa0898490 | Msa1031650 | 0.801553 | 8.529183e-49 | -8.615850e-47 |
| Msa0898490 | Msa1032790 | 0.800536 | 1.376211e-48 | -8.615850e-47 |
| Msa0898490 | Msa1033460 | 0.807924 | 3.984768e-50 | -8.615850e-47 |
| Msa0898490 | Msa1038040 | 0.819447 | 1.155646e-52 | -8.615850e-47 |
| Msa0898490 | Msa1038570 | 0.808954 | 2.402742e-50 | -8.615850e-47 |
| Msa0898490 | Msa1038580 | 0.820252 | 7.565782e-53 | -8.615850e-47 |
| Msa0898490 | Msa1038610 | 0.818113 | 2.322205e-52 | -8.615850e-47 |
| Msa0898490 | Msa1050320 | 0.806680 | 7.315028e-50 | -8.615850e-47 |
| Msa0898490 | Msa1068110 | 0.835911 | 1.273905e-56 | -8.615850e-47 |
| Msa0898490 | Msa1070710 | 0.828611 | 8.165222e-55 | -8.615850e-47 |
| Msa0898490 | Msa1070930 | 0.814975 | 1.171250e-51 | -8.615850e-47 |
| Msa0898490 | Msa1071380 | 0.803647 | 3.154609e-49 | -8.615850e-47 |
| Msa0898490 | Msa1072640 | 0.813396 | 2.613917e-51 | -8.615850e-47 |
| Msa0898490 | Msa1083850 | 0.837432 | 5.217638e-57 | -8.615850e-47 |
| Msa0898490 | Msa1088000 | 0.811422 | 7.057019e-51 | -8.615850e-47 |
| Msa0898490 | Msa1090020 | 0.801910 | 7.205318e-49 | -8.615850e-47 |
| Msa0898490 | Msa1093250 | 0.819147 | 1.352997e-52 | -8.615850e-47 |
| Msa0898490 | Msa1098470 | 0.812380 | 4.364094e-51 | -8.615850e-47 |
| Msa0898490 | Msa1099330 | 0.800022 | 1.751476e-48 | -8.615850e-47 |
| Msa0898490 | Msa1112010 | 0.813022 | 3.158836e-51 | -8.615850e-47 |
| Msa0898490 | Msa1112230 | 0.824460 | 7.976692e-54 | -8.615850e-47 |
| Msa0898490 | Msa1113780 | 0.808033 | 3.777318e-50 | -8.615850e-47 |
| Msa0898490 | Msa1117830 | 0.809439 | 1.891188e-50 | -8.615850e-47 |
| Msa0898490 | Msa1118890 | 0.809047 | 2.295133e-50 | -8.615850e-47 |
| Msa0898490 | Msa1122710 | 0.801694 | 7.977141e-49 | -8.615850e-47 |
| Msa0898490 | Msa1127530 | 0.828477 | 8.795655e-55 | -8.615850e-47 |
| Msa0898490 | Msa1128230 | 0.806704 | 7.229818e-50 | -8.615850e-47 |
| Msa0898490 | Msa1140940 | 0.813561 | 2.405236e-51 | -8.615850e-47 |
| Msa0898490 | Msa1150130 | 0.824007 | 1.019147e-53 | -8.615850e-47 |
| Msa0898490 | Msa1156480 | 0.800635 | 1.314123e-48 | -8.615850e-47 |
| Msa0898490 | Msa1158540 | 0.830308 | 3.160132e-55 | -8.615850e-47 |
| Msa0898490 | Msa1160470 | 0.804708 | 1.897695e-49 | -8.615850e-47 |
| Msa0898490 | Msa1161520 | 0.807369 | 5.228756e-50 | -8.615850e-47 |
| Msa0898490 | Msa1165330 | 0.824899 | 6.285951e-54 | -8.615850e-47 |
| Msa0898490 | Msa1173410 | 0.803705 | 3.069143e-49 | -8.615850e-47 |
| Msa0898490 | Msa1182480 | 0.807053 | 6.098003e-50 | -8.615850e-47 |
| Msa0898490 | Msa1182950 | 0.800100 | 1.688634e-48 | -8.615850e-47 |
| Msa0898490 | Msa1186010 | 0.801213 | 1.001019e-48 | -8.615850e-47 |
| Msa0898490 | Msa1193680 | 0.812636 | 3.837516e-51 | -8.615850e-47 |
| Msa0898490 | Msa1203840 | 0.802472 | 5.520349e-49 | -8.615850e-47 |
| Msa0898490 | Msa1206510 | 0.809227 | 2.099628e-50 | -8.615850e-47 |
| Msa0898490 | Msa1207770 | 0.801952 | 7.063533e-49 | -8.615850e-47 |
| Msa0898490 | Msa1212070 | 0.805803 | 1.119173e-49 | -8.615850e-47 |
| Msa0898490 | Msa1220390 | 0.806224 | 9.127330e-50 | -8.615850e-47 |
| Msa0898490 | Msa1223600 | 0.804568 | 2.029083e-49 | -8.615850e-47 |
| Msa0898490 | Msa1229880 | 0.820044 | 8.444858e-53 | -8.615850e-47 |
| Msa0898490 | Msa1235960 | 0.801013 | 1.100127e-48 | -8.615850e-47 |
| Msa0898490 | Msa1235990 | 0.801990 | 6.937485e-49 | -8.615850e-47 |
| Msa0898490 | Msa1236990 | 0.800772 | 1.232043e-48 | -8.615850e-47 |
| Msa0898490 | Msa1240240 | 0.820525 | 6.550168e-53 | -8.615850e-47 |
| Msa0898490 | Msa1258200 | 0.810864 | 9.322183e-51 | -8.615850e-47 |
| Msa0898490 | Msa1260640 | 0.849596 | 2.920734e-60 | -8.615850e-47 |
| Msa0898490 | Msa1262740 | 0.801000 | 1.106885e-48 | -8.615850e-47 |
| Msa0898490 | Msa1263970 | 0.829183 | 5.935252e-55 | -8.615850e-47 |
| Msa0898490 | Msa1265900 | 0.802531 | 5.368740e-49 | -8.615850e-47 |
| Msa0898490 | Msa1267800 | 0.814420 | 1.554988e-51 | -8.615850e-47 |
| Msa0898490 | Msa1272770 | 0.802698 | 4.958945e-49 | -8.615850e-47 |
| Msa0898490 | Msa1279240 | 0.813058 | 3.101305e-51 | -8.615850e-47 |
| Msa0898490 | Msa1281390 | 0.815444 | 9.216671e-52 | -8.615850e-47 |
| Msa0898490 | Msa1296930 | 0.812910 | 3.343028e-51 | -8.615850e-47 |
| Msa0898490 | Msa1303130 | 0.810322 | 1.221107e-50 | -8.615850e-47 |
| Msa0898490 | Msa1310620 | 0.823069 | 1.689173e-53 | -8.615850e-47 |
| Msa0898490 | Msa1317340 | 0.812481 | 4.148334e-51 | -8.615850e-47 |
| Msa0898490 | Msa1319520 | 0.801411 | 9.117909e-49 | -8.615850e-47 |
| Msa0898490 | Msa1330910 | 0.820434 | 6.871829e-53 | -8.615850e-47 |
| Msa0898490 | Msa1339310 | 0.807276 | 5.470964e-50 | -8.615850e-47 |
| Msa0898490 | Msa1345490 | 0.811052 | 8.488963e-51 | -8.615850e-47 |
| Msa0898490 | Msa1346220 | 0.845968 | 2.915988e-59 | -8.615850e-47 |
| Msa0898490 | Msa1346340 | 0.833278 | 5.846710e-56 | -8.615850e-47 |
| Msa0898490 | Msa1348870 | 0.804214 | 2.404847e-49 | -8.615850e-47 |
| Msa0898490 | Msa1350350 | 0.813302 | 2.742426e-51 | -8.615850e-47 |
| Msa0898490 | Msa1368660 | 0.813898 | 2.027302e-51 | -8.615850e-47 |
| Msa0898490 | Msa1368800 | 0.818891 | 1.547286e-52 | -8.615850e-47 |
| Msa0898490 | Msa1370830 | 0.800548 | 1.368447e-48 | -8.615850e-47 |
| Msa0898490 | Msa1374610 | 0.819535 | 1.103744e-52 | -8.615850e-47 |
| Msa0898490 | Msa1376010 | 0.801306 | 9.580558e-49 | -8.615850e-47 |
| Msa0898490 | Msa1381830 | 0.826103 | 3.259412e-54 | -8.615850e-47 |
| Msa0898490 | Msa1384970 | 0.821285 | 4.378934e-53 | -8.615850e-47 |
| Msa0898490 | Msa1387650 | 0.809607 | 1.740712e-50 | -8.615850e-47 |
| Msa0898490 | Msa1388270 | 0.800778 | 1.228522e-48 | -8.615850e-47 |
| Msa0898490 | Msa1393350 | 0.833471 | 5.233267e-56 | -8.615850e-47 |
| Msa0898490 | Msa1405990 | 0.808412 | 3.136514e-50 | -8.615850e-47 |
| Msa0898490 | Msa1407770 | 0.804357 | 2.245784e-49 | -8.615850e-47 |
| Msa0898490 | Msa1408190 | 0.801079 | 1.066167e-48 | -8.615850e-47 |
| Msa0898490 | Msa1413360 | 0.802670 | 5.024550e-49 | -8.615850e-47 |
| Msa0898490 | Msa1414000 | 0.811846 | 5.708345e-51 | -8.615850e-47 |
| Msa0898490 | Msa1416850 | 0.804238 | 2.377151e-49 | -8.615850e-47 |
| Msa0898490 | Msa1418840 | 0.807468 | 4.980617e-50 | -8.615850e-47 |
| Msa0898490 | Msa1424250 | 0.807729 | 4.384752e-50 | -8.615850e-47 |
| Msa0898490 | Msa1425110 | 0.809697 | 1.664349e-50 | -8.615850e-47 |
| Msa0898490 | Msa1425600 | 0.806789 | 6.934781e-50 | -8.615850e-47 |
| Msa0898490 | Msa1426690 | 0.806685 | 7.297043e-50 | -8.615850e-47 |
| Msa0898490 | Msa1428790 | 0.810465 | 1.137128e-50 | -8.615850e-47 |
| Msa0898490 | Msa1430630 | 0.800476 | 1.415450e-48 | -8.615850e-47 |
| Msa0898490 | Msa1433060 | 0.802152 | 6.423981e-49 | -8.615850e-47 |
| Msa0898490 | Msa1436660 | 0.800502 | 1.398568e-48 | -8.615850e-47 |
| Msa0898490 | Msa1437740 | 0.802275 | 6.061745e-49 | -8.615850e-47 |
| Msa0898490 | Msa1439000 | 0.806541 | 7.823179e-50 | -8.615850e-47 |
| Msa0898490 | Msa1443440 | 0.810718 | 1.002866e-50 | -8.615850e-47 |
| Msa0898490 | Msa1446220 | 0.818679 | 1.728345e-52 | -8.615850e-47 |
| Msa0898490 | Msa1448990 | 0.801716 | 7.895072e-49 | -8.615850e-47 |
| Msa0898490 | Msa1449510 | 0.800600 | 1.335672e-48 | -8.615850e-47 |
| Msa0898490 | Msa1450850 | 0.801023 | 1.094876e-48 | -8.615850e-47 |
| Msa0898490 | Msa1459680 | 0.829194 | 5.899824e-55 | -8.615850e-47 |
| Msa0898490 | Msa1464470 | 0.817039 | 4.054769e-52 | -8.615850e-47 |
| Msa0898490 | Msa1466170 | 0.815041 | 1.132626e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898490 | MtrunA17_Chr6g0483981 | 67.539 | 191 | 37 | 2 | 1 | 166 | 1 | 191 | 1.13e-76 | 241 |
| Msa0898490 | MtrunA17_Chr4g0064041 | 64.062 | 128 | 36 | 3 | 1 | 118 | 1 | 128 | 4.48e-44 | 151 |
| Msa0898490 | MtrunA17_Chr4g0064041 | 55.446 | 101 | 37 | 1 | 26 | 118 | 190 | 290 | 3.78e-31 | 117 |
| Msa0898490 | MtrunA17_Chr2g0306461 | 45.000 | 120 | 56 | 4 | 8 | 119 | 9 | 126 | 1.37e-24 | 96.3 |
| Msa0898490 | MtrunA17_Chr5g0394321 | 29.319 | 191 | 97 | 3 | 9 | 191 | 8 | 168 | 8.84e-21 | 85.9 |
| Msa0898490 | MtrunA17_Chr4g0033131 | 36.066 | 122 | 68 | 1 | 8 | 119 | 9 | 130 | 1.12e-20 | 85.5 |
| Msa0898490 | MtrunA17_Chr4g0033531 | 36.066 | 122 | 68 | 1 | 8 | 119 | 9 | 130 | 1.12e-20 | 85.5 |
| Msa0898490 | MtrunA17_Chr1g0205701 | 35.714 | 126 | 69 | 3 | 1 | 118 | 1 | 122 | 8.47e-20 | 83.2 |
| Msa0898490 | MtrunA17_Chr3g0132441 | 39.669 | 121 | 60 | 4 | 6 | 118 | 5 | 120 | 5.48e-18 | 78.6 |
| Msa0898490 | MtrunA17_Chr3g0132701 | 42.453 | 106 | 48 | 4 | 22 | 118 | 21 | 122 | 7.32e-18 | 79.0 |
| Msa0898490 | MtrunA17_Chr3g0132511 | 42.453 | 106 | 48 | 4 | 22 | 118 | 21 | 122 | 9.92e-18 | 78.6 |
| Msa0898490 | MtrunA17_Chr3g0132431 | 36.585 | 123 | 65 | 4 | 6 | 120 | 5 | 122 | 2.69e-17 | 76.6 |
| Msa0898490 | MtrunA17_Chr8g0380901 | 39.806 | 103 | 49 | 2 | 24 | 119 | 25 | 121 | 3.13e-17 | 74.7 |
| Msa0898490 | MtrunA17_Chr8g0380711 | 35.714 | 112 | 55 | 4 | 16 | 119 | 20 | 122 | 1.26e-16 | 73.2 |
| Msa0898490 | MtrunA17_Chr8g0387804 | 32.500 | 120 | 72 | 2 | 8 | 119 | 10 | 128 | 1.15e-15 | 70.9 |
| Msa0898490 | MtrunA17_Chr2g0301431 | 39.806 | 103 | 49 | 3 | 22 | 117 | 27 | 123 | 2.13e-15 | 70.1 |
| Msa0898490 | MtrunA17_Chr7g0253761 | 37.273 | 110 | 51 | 4 | 22 | 120 | 21 | 123 | 3.07e-15 | 70.9 |
| Msa0898490 | MtrunA17_Chr7g0253681 | 35.246 | 122 | 63 | 4 | 9 | 118 | 6 | 123 | 3.75e-15 | 70.5 |
| Msa0898490 | MtrunA17_Chr6g0483971 | 60.317 | 63 | 12 | 1 | 128 | 190 | 210 | 259 | 1.04e-14 | 71.6 |
| Msa0898490 | MtrunA17_Chr7g0253701 | 35.537 | 121 | 63 | 4 | 9 | 118 | 6 | 122 | 2.78e-14 | 68.2 |
| Msa0898490 | MtrunA17_Chr7g0253671 | 35.537 | 121 | 63 | 4 | 9 | 118 | 6 | 122 | 2.78e-14 | 68.2 |
| Msa0898490 | MtrunA17_Chr2g0323021 | 31.429 | 140 | 84 | 3 | 5 | 136 | 3 | 138 | 3.08e-14 | 69.3 |
| Msa0898490 | MtrunA17_Chr7g0253641 | 40.187 | 107 | 52 | 3 | 22 | 120 | 21 | 123 | 3.81e-14 | 68.9 |
| Msa0898490 | MtrunA17_Chr7g0253631 | 37.500 | 112 | 54 | 4 | 22 | 123 | 21 | 126 | 5.20e-14 | 68.9 |
| Msa0898490 | MtrunA17_Chr8g0335531 | 40.952 | 105 | 47 | 5 | 24 | 118 | 21 | 120 | 5.24e-14 | 67.8 |
| Msa0898490 | MtrunA17_Chr1g0177341 | 35.294 | 119 | 62 | 4 | 11 | 118 | 7 | 121 | 9.29e-14 | 66.6 |
| Msa0898490 | MtrunA17_Chr1g0177331 | 35.294 | 119 | 62 | 4 | 11 | 118 | 7 | 121 | 9.29e-14 | 66.6 |
| Msa0898490 | MtrunA17_Chr4g0064031 | 36.082 | 97 | 51 | 3 | 24 | 109 | 25 | 121 | 1.90e-13 | 65.9 |
| Msa0898490 | MtrunA17_Chr1g0211101 | 29.268 | 123 | 74 | 2 | 8 | 121 | 14 | 132 | 2.28e-13 | 66.2 |
| Msa0898490 | MtrunA17_Chr6g0458331 | 35.644 | 101 | 54 | 3 | 27 | 118 | 37 | 135 | 3.92e-13 | 65.1 |
| Msa0898490 | MtrunA17_Chr2g0324721 | 32.484 | 157 | 84 | 8 | 24 | 163 | 24 | 175 | 5.63e-13 | 65.5 |
| Msa0898490 | MtrunA17_Chr1g0196801 | 32.026 | 153 | 74 | 6 | 24 | 166 | 20 | 152 | 8.32e-13 | 64.3 |
| Msa0898490 | MtrunA17_Chr2g0331181 | 32.192 | 146 | 87 | 4 | 1 | 136 | 1 | 144 | 8.89e-13 | 64.7 |
| Msa0898490 | MtrunA17_Chr7g0253731 | 32.432 | 111 | 61 | 3 | 12 | 112 | 8 | 114 | 1.41e-12 | 63.5 |
| Msa0898490 | MtrunA17_Chr3g0132411 | 34.127 | 126 | 69 | 4 | 3 | 120 | 42 | 161 | 1.92e-12 | 63.2 |
| Msa0898490 | MtrunA17_Chr3g0125761 | 31.933 | 119 | 68 | 3 | 8 | 119 | 14 | 126 | 9.20e-12 | 60.5 |
| Msa0898490 | MtrunA17_Chr1g0150131 | 28.182 | 110 | 71 | 1 | 35 | 136 | 34 | 143 | 3.63e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898490 | AT5G20230.1 | 39.024 | 123 | 64 | 3 | 25 | 137 | 23 | 144 | 2.75e-20 | 85.1 |
| Msa0898490 | AT2G32300.1 | 38.017 | 121 | 63 | 3 | 8 | 120 | 7 | 123 | 8.91e-20 | 85.5 |
| Msa0898490 | AT2G32300.2 | 38.281 | 128 | 66 | 4 | 1 | 120 | 31 | 153 | 1.81e-19 | 85.1 |
| Msa0898490 | AT3G17675.1 | 32.520 | 123 | 67 | 3 | 8 | 120 | 13 | 129 | 4.80e-17 | 75.1 |
| Msa0898490 | AT3G20570.1 | 34.109 | 129 | 73 | 3 | 1 | 118 | 1 | 128 | 7.74e-17 | 76.3 |
| Msa0898490 | AT5G26330.1 | 34.454 | 119 | 68 | 2 | 8 | 118 | 5 | 121 | 3.90e-16 | 73.9 |
| Msa0898490 | AT2G26720.1 | 39.344 | 122 | 57 | 6 | 8 | 120 | 14 | 127 | 4.00e-16 | 74.3 |
| Msa0898490 | AT2G25060.1 | 37.302 | 126 | 65 | 4 | 22 | 138 | 26 | 146 | 6.04e-16 | 73.6 |
| Msa0898490 | AT2G31050.1 | 37.398 | 123 | 65 | 3 | 12 | 125 | 13 | 132 | 1.32e-15 | 72.8 |
| Msa0898490 | AT4G31840.1 | 31.757 | 148 | 88 | 4 | 8 | 142 | 7 | 154 | 6.26e-13 | 65.1 |
| Msa0898490 | AT3G60270.1 | 36.893 | 103 | 52 | 4 | 24 | 118 | 23 | 120 | 8.18e-13 | 65.1 |
| Msa0898490 | AT1G72230.1 | 39.024 | 82 | 41 | 2 | 45 | 118 | 37 | 117 | 1.47e-11 | 61.6 |
| Msa0898490 | AT3G60280.1 | 35.644 | 101 | 52 | 3 | 24 | 116 | 21 | 116 | 2.64e-11 | 61.6 |
| Msa0898490 | AT4G28365.1 | 30.405 | 148 | 92 | 5 | 27 | 165 | 29 | 174 | 4.03e-11 | 60.5 |
| Msa0898490 | AT5G15350.1 | 31.667 | 120 | 64 | 5 | 21 | 130 | 23 | 134 | 5.35e-11 | 59.7 |
| Msa0898490 | AT4G30590.1 | 30.579 | 121 | 74 | 3 | 8 | 118 | 8 | 128 | 6.71e-11 | 59.7 |
Find 59 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTTGTTTGGTTTCTAAAA+TGG | 0.208020 | 6_1:+92626064 | None:intergenic |
| TTGGTGTTGGTGTCGGTGTC+GGG | 0.254281 | 6_1:+92623613 | None:intergenic |
| TATTTCATATGTACCGTTAC+TGG | 0.314883 | 6_1:-92625571 | Msa0898490:CDS |
| GAATATGCTTTGCGTTTGTT+TGG | 0.370054 | 6_1:+92626052 | None:intergenic |
| GATCACAATTCTATGTCAAC+TGG | 0.371880 | 6_1:-92625853 | Msa0898490:CDS |
| GAAATAGTGGCAGGTGGTGC+TGG | 0.379016 | 6_1:+92625493 | None:intergenic |
| GTTGGTGTTGGTGTCGGTGT+CGG | 0.389347 | 6_1:+92623612 | None:intergenic |
| ATCATGGCAAGCAACATAAA+TGG | 0.396196 | 6_1:-92625977 | Msa0898490:CDS |
| TATGAAAAGTAAATCTGAAT+AGG | 0.407659 | 6_1:+92623496 | None:intergenic |
| CTATATATAGTTTGCAGTAA+TGG | 0.421642 | 6_1:-92623684 | Msa0898490:intron |
| GGGAAATTCGACAATGGACT+TGG | 0.432208 | 6_1:+92623567 | None:intergenic |
| TTGTAGCACGATGAATTTGT+AGG | 0.448754 | 6_1:+92623544 | None:intergenic |
| AGCAGGAGCGGGTGAAATAG+TGG | 0.464517 | 6_1:+92625480 | None:intergenic |
| CTAAAATGGAAGAACTTATG+AGG | 0.465288 | 6_1:+92626078 | None:intergenic |
| CAAATTCATCGTGCTACAAC+AGG | 0.465430 | 6_1:-92623540 | Msa0898490:CDS |
| GCAGTGGCTAACCTTCTTCA+TGG | 0.479052 | 6_1:-92625935 | Msa0898490:CDS |
| GCTATTGTCAGCAGTGGCAT+TGG | 0.481172 | 6_1:+92623650 | None:intergenic |
| ATTTCACCCGCTCCTGCTAC+TGG | 0.486203 | 6_1:-92625475 | Msa0898490:intron |
| GTAAATCTGAATAGGTAAAA+CGG | 0.502660 | 6_1:+92623504 | None:intergenic |
| ACCAATAAAACCTTCACCTT+AGG | 0.504345 | 6_1:-92625827 | Msa0898490:CDS |
| CCGTGGGTGATGACTTAGGC+TGG | 0.505012 | 6_1:-92625892 | Msa0898490:CDS |
| CTATTGTCAGCAGTGGCATT+GGG | 0.505434 | 6_1:+92623651 | None:intergenic |
| GGCTGGATTATCCCAACCGT+TGG | 0.506002 | 6_1:-92625875 | Msa0898490:CDS |
| GTTACTGGTCACTGTTCTGC+TGG | 0.511691 | 6_1:-92625556 | Msa0898490:CDS |
| TTGTTCTTACAAGTAATAAG+TGG | 0.513067 | 6_1:+92626010 | None:intergenic |
| TAGAATTGTGATCCAACGGT+TGG | 0.521337 | 6_1:+92625863 | None:intergenic |
| TGTAGCACGATGAATTTGTA+GGG | 0.523704 | 6_1:+92623545 | None:intergenic |
| GAACAATCACTACACAATCA+TGG | 0.526455 | 6_1:-92625993 | Msa0898490:exon |
| TTGCTACGGATCCATGAAGA+AGG | 0.528261 | 6_1:+92625924 | None:intergenic |
| GAATGCACACGCCGTGGCAA+AGG | 0.533207 | 6_1:-92625692 | Msa0898490:CDS |
| AGAATTGTGATCCAACGGTT+GGG | 0.536039 | 6_1:+92625864 | None:intergenic |
| GTGAAGTACATACCAGTAGC+AGG | 0.536955 | 6_1:+92625463 | None:intergenic |
| ATCGGTGTTGGTGTTGGTGT+CGG | 0.538552 | 6_1:+92623606 | None:intergenic |
| TTCACCTTAGGTGACACTCT+TGG | 0.542721 | 6_1:-92625815 | Msa0898490:intron |
| TCAGCTTTCGATAGTTGCAA+TGG | 0.542896 | 6_1:-92625661 | Msa0898490:CDS |
| GTTAGCATCGGTGTTGGTGT+TGG | 0.544952 | 6_1:+92623600 | None:intergenic |
| CAATGGAACCAACGCACTTG+TGG | 0.564659 | 6_1:-92625644 | Msa0898490:intron |
| AAGCATATTCCTAGAAAACA+AGG | 0.569771 | 6_1:-92626039 | Msa0898490:five_prime_UTR |
| TAAGTCATCACCCACGGTGA+AGG | 0.570272 | 6_1:+92625898 | None:intergenic |
| TACATACCAGTAGCAGGAGC+GGG | 0.576968 | 6_1:+92625469 | None:intergenic |
| GGAGCGGGTGAAATAGTGGC+AGG | 0.577119 | 6_1:+92625484 | None:intergenic |
| GACATAGAATTGTGATCCAA+CGG | 0.579776 | 6_1:+92625859 | None:intergenic |
| TGTCATAACCACAAGTGCGT+TGG | 0.581906 | 6_1:+92625636 | None:intergenic |
| AGCAGAACAGTGACCAGTAA+CGG | 0.582060 | 6_1:+92625558 | None:intergenic |
| TGGTGTTGGTGTCGGTGTCG+GGG | 0.585525 | 6_1:+92623614 | None:intergenic |
| AAGAATGTTAGCATCGGTGT+TGG | 0.587643 | 6_1:+92623594 | None:intergenic |
| GGCGATAAGAATGTTAGCAT+CGG | 0.607499 | 6_1:+92623588 | None:intergenic |
| CATACCAAGAGTGTCACCTA+AGG | 0.607937 | 6_1:+92625811 | None:intergenic |
| TTCACCGTGGGTGATGACTT+AGG | 0.609147 | 6_1:-92625896 | Msa0898490:CDS |
| TCAATTGAATGCACACGCCG+TGG | 0.614375 | 6_1:-92625698 | Msa0898490:CDS |
| ATCACAATTCTATGTCAACT+GGG | 0.616176 | 6_1:-92625852 | Msa0898490:CDS |
| GTACATACCAGTAGCAGGAG+CGG | 0.622967 | 6_1:+92625468 | None:intergenic |
| AAGAGTGTCACCTAAGGTGA+AGG | 0.625994 | 6_1:+92625817 | None:intergenic |
| AATTGAGCTATTGTCAGCAG+TGG | 0.653364 | 6_1:+92623644 | None:intergenic |
| GCGGGTGAAATAGTGGCAGG+TGG | 0.653610 | 6_1:+92625487 | None:intergenic |
| GTAGCACGATGAATTTGTAG+GGG | 0.668166 | 6_1:+92623546 | None:intergenic |
| CCAGCCTAAGTCATCACCCA+CGG | 0.672113 | 6_1:+92625892 | None:intergenic |
| TAGCACGATGAATTTGTAGG+GGG | 0.681109 | 6_1:+92623547 | None:intergenic |
| AGCATATTCCTAGAAAACAA+GGG | 0.681328 | 6_1:-92626038 | Msa0898490:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAATAAATATAAAAT+TGG | - | chr6_1:92625426-92625445 | Msa0898490:intron | 0.0% |
| !! | AAAAAAATAAATATAAAATT+GGG | - | chr6_1:92625427-92625446 | Msa0898490:intron | 0.0% |
| !! | ATTAACACTATATAAATAAT+AGG | - | chr6_1:92624528-92624547 | Msa0898490:intron | 10.0% |
| !! | TTAACACTATATAAATAATA+GGG | - | chr6_1:92624529-92624548 | Msa0898490:intron | 10.0% |
| !!! | GTTTTTTTTTTTTATATGTA+AGG | + | chr6_1:92624856-92624875 | None:intergenic | 10.0% |
| !!! | TAAAAAAAAAAAACATGTTT+TGG | - | chr6_1:92624862-92624881 | Msa0898490:intron | 10.0% |
| !!! | AAAAAAAAAAAACATGTTTT+GGG | - | chr6_1:92624863-92624882 | Msa0898490:intron | 10.0% |
| !! | TCTCAATAATAAAATAAAAA+AGG | - | chr6_1:92625693-92625712 | Msa0898490:CDS | 10.0% |
| !! | TACTAGAATTACTATATAAA+TGG | + | chr6_1:92624170-92624189 | None:intergenic | 15.0% |
| !! | TTTATATAGTAATTCTAGTA+TGG | - | chr6_1:92624170-92624189 | Msa0898490:intron | 15.0% |
| !!! | TGTTCAAAGTATATTTTTTT+TGG | - | chr6_1:92624221-92624240 | Msa0898490:intron | 15.0% |
| !! | AATTATTAATAAAAACACTC+TGG | - | chr6_1:92624423-92624442 | Msa0898490:intron | 15.0% |
| !! | ATATAAATAATAGGGTTAAT+AGG | - | chr6_1:92624537-92624556 | Msa0898490:intron | 15.0% |
| !!! | TCAAAAAAAAATATTTTGCA+GGG | + | chr6_1:92624603-92624622 | None:intergenic | 15.0% |
| !!! | ATCAAAAAAAAATATTTTGC+AGG | + | chr6_1:92624604-92624623 | None:intergenic | 15.0% |
| !!! | AAATTAAATTGGTTTTTGTT+TGG | + | chr6_1:92624667-92624686 | None:intergenic | 15.0% |
| !!! | ATCAAAACAATTTTTTTTAC+AGG | - | chr6_1:92624736-92624755 | Msa0898490:intron | 15.0% |
| !!! | TCAAAACAATTTTTTTTACA+GGG | - | chr6_1:92624737-92624756 | Msa0898490:intron | 15.0% |
| !! | AATTAATATTAAGGGTTAAT+AGG | + | chr6_1:92624828-92624847 | None:intergenic | 15.0% |
| !! | TAAAAAATAAAATGCAAACT+TGG | - | chr6_1:92625061-92625080 | Msa0898490:intron | 15.0% |
| !! | AAAAAATAAAATGCAAACTT+GGG | - | chr6_1:92625062-92625081 | Msa0898490:intron | 15.0% |
| !! | AAAATAAATATAAAATTGGG+TGG | - | chr6_1:92625430-92625449 | Msa0898490:intron | 15.0% |
| !!! | AAATTTCCAACTTTTTTTAT+AGG | - | chr6_1:92625570-92625589 | Msa0898490:CDS | 15.0% |
| !!! | AATTTCCAACTTTTTTTATA+GGG | - | chr6_1:92625571-92625590 | Msa0898490:CDS | 15.0% |
| !!! | TTCTTTTTAACGTTAAATAA+TGG | + | chr6_1:92625633-92625652 | None:intergenic | 15.0% |
| !!! | CCAAAATTGAAATTTTTTGT+CGG | + | chr6_1:92624372-92624391 | None:intergenic | 20.0% |
| !!! | AGTACCTTATTTTGTTTTTT+GGG | + | chr6_1:92624396-92624415 | None:intergenic | 20.0% |
| !!! | TAGTACCTTATTTTGTTTTT+TGG | + | chr6_1:92624397-92624416 | None:intergenic | 20.0% |
| !! | GGTAAATAAAAAAAATTGCA+GGG | + | chr6_1:92624633-92624652 | None:intergenic | 20.0% |
| !!! | CAAAACAATTTTTTTTACAG+GGG | - | chr6_1:92624738-92624757 | Msa0898490:intron | 20.0% |
| !!! | AAAACAATTTTTTTTACAGG+GGG | - | chr6_1:92624739-92624758 | Msa0898490:intron | 20.0% |
| !!! | TATTTTATAAGGTGTAAAAC+CGG | - | chr6_1:92624774-92624793 | Msa0898490:intron | 20.0% |
| !! | AGGCACTTAATTAATATTAA+GGG | + | chr6_1:92624836-92624855 | None:intergenic | 20.0% |
| !!! | AAGGCACTTAATTAATATTA+AGG | + | chr6_1:92624837-92624856 | None:intergenic | 20.0% |
| !! | ATATTACATAATATATGCAG+GGG | + | chr6_1:92624938-92624957 | None:intergenic | 20.0% |
| !! | GATATTACATAATATATGCA+GGG | + | chr6_1:92624939-92624958 | None:intergenic | 20.0% |
| !!! | CTAAAAAAAAATCGCTTTTA+AGG | - | chr6_1:92625255-92625274 | Msa0898490:intron | 20.0% |
| !! | TTTCTTCGAATCAATATATT+GGG | + | chr6_1:92625332-92625351 | None:intergenic | 20.0% |
| !!! | TTTTCTTCGAATCAATATAT+TGG | + | chr6_1:92625333-92625352 | None:intergenic | 20.0% |
| !!! | ATTTCCAACTTTTTTTATAG+GGG | - | chr6_1:92625572-92625591 | Msa0898490:CDS | 20.0% |
| !!! | ACTTTTATTATTCTATACGT+GGG | + | chr6_1:92625750-92625769 | None:intergenic | 20.0% |
| !!! | AATAATAAAAGTGCAAACAT+TGG | - | chr6_1:92625758-92625777 | Msa0898490:intron | 20.0% |
| !! | TATGAAAAGTAAATCTGAAT+AGG | + | chr6_1:92626039-92626058 | None:intergenic | 20.0% |
| !!! | TACGACTTTGTAAATTTTAA+GGG | - | chr6_1:92626091-92626110 | Msa0898490:five_prime_UTR | 20.0% |
| ! | TTGTTCTTACAAGTAATAAG+TGG | + | chr6_1:92623525-92623544 | None:intergenic | 25.0% |
| ! | GTAACTTAATCAAAATAGCT+AGG | + | chr6_1:92624128-92624147 | None:intergenic | 25.0% |
| !!! | TTTTTTGGTAAGTAATCTAG+TGG | - | chr6_1:92624236-92624255 | Msa0898490:intron | 25.0% |
| !!! | TTTTTGGTAAGTAATCTAGT+GGG | - | chr6_1:92624237-92624256 | Msa0898490:intron | 25.0% |
| !!! | GGAACTTACACATTTTAATA+TGG | - | chr6_1:92624261-92624280 | Msa0898490:intron | 25.0% |
| !!! | AGACAACAAATTTGTTAAGA+CGG | + | chr6_1:92624330-92624349 | None:intergenic | 25.0% |
| !!! | TGTCTCTGTTTTAGTTTTTA+AGG | - | chr6_1:92624345-92624364 | Msa0898490:intron | 25.0% |
| !!! | GTCTCTGTTTTAGTTTTTAA+GGG | - | chr6_1:92624346-92624365 | Msa0898490:intron | 25.0% |
| !! | CCGACAAAAAATTTCAATTT+TGG | - | chr6_1:92624369-92624388 | Msa0898490:intron | 25.0% |
| ! | TATTAATAAAAACACTCTGG+TGG | - | chr6_1:92624426-92624445 | Msa0898490:intron | 25.0% |
| ! | AAATAAAAAAAATTGCAGGG+AGG | + | chr6_1:92624630-92624649 | None:intergenic | 25.0% |
| ! | GGGTAAATAAAAAAAATTGC+AGG | + | chr6_1:92624634-92624653 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGTTTAGCCTATT+AGG | - | chr6_1:92624706-92624725 | Msa0898490:intron | 25.0% |
| !!! | TGTTTTTGTTTAGCCTATTA+GGG | - | chr6_1:92624707-92624726 | Msa0898490:intron | 25.0% |
| !! | TCTGTAATATATGTCATTTC+CGG | + | chr6_1:92624796-92624815 | None:intergenic | 25.0% |
| ! | GAAATGACATATATTACAGA+GGG | - | chr6_1:92624796-92624815 | Msa0898490:intron | 25.0% |
| ! | GGATATTACATAATATATGC+AGG | + | chr6_1:92624940-92624959 | None:intergenic | 25.0% |
| !!! | TTTCCAACTTTTTTTATAGG+GGG | - | chr6_1:92625573-92625592 | Msa0898490:CDS | 25.0% |
| !! | CACTTTTATTATTCTATACG+TGG | + | chr6_1:92625751-92625770 | None:intergenic | 25.0% |
| !! | CTATATATAGTTTGCAGTAA+TGG | - | chr6_1:92625848-92625867 | Msa0898490:CDS | 25.0% |
| ! | GTAAATCTGAATAGGTAAAA+CGG | + | chr6_1:92626031-92626050 | None:intergenic | 25.0% |
| !! | CTACGACTTTGTAAATTTTA+AGG | - | chr6_1:92626090-92626109 | Msa0898490:five_prime_UTR | 25.0% |
| CTAAAATGGAAGAACTTATG+AGG | + | chr6_1:92623457-92623476 | None:intergenic | 30.0% | |
| ! | CGTTTGTTTGGTTTCTAAAA+TGG | + | chr6_1:92623471-92623490 | None:intergenic | 30.0% |
| AAGCATATTCCTAGAAAACA+AGG | - | chr6_1:92623493-92623512 | Msa0898490:CDS | 30.0% | |
| AGCATATTCCTAGAAAACAA+GGG | - | chr6_1:92623494-92623513 | Msa0898490:CDS | 30.0% | |
| ATCACAATTCTATGTCAACT+GGG | - | chr6_1:92623680-92623699 | Msa0898490:intron | 30.0% | |
| TATTTCATATGTACCGTTAC+TGG | - | chr6_1:92623961-92623980 | Msa0898490:intron | 30.0% | |
| CTAAATCTATATCAGTGGAA+GGG | + | chr6_1:92624094-92624113 | None:intergenic | 30.0% | |
| AATCAAAATAGCTAGGCTAA+TGG | + | chr6_1:92624121-92624140 | None:intergenic | 30.0% | |
| TGGAGTAATAATTAACACAG+TGG | + | chr6_1:92624150-92624169 | None:intergenic | 30.0% | |
| !! | CACATTTTAATATGGAGAAC+CGG | - | chr6_1:92624269-92624288 | Msa0898490:intron | 30.0% |
| !! | ACATTTTAATATGGAGAACC+GGG | - | chr6_1:92624270-92624289 | Msa0898490:intron | 30.0% |
| TGGACCCAAAAAACAAAATA+AGG | - | chr6_1:92624389-92624408 | Msa0898490:intron | 30.0% | |
| ! | ATATTTTGCAGGGAAAAAAC+CGG | + | chr6_1:92624593-92624612 | None:intergenic | 30.0% |
| !! | TTTTTGTTTGGTCTATTAGG+GGG | + | chr6_1:92624655-92624674 | None:intergenic | 30.0% |
| !! | GTTTTTGTTTGGTCTATTAG+GGG | + | chr6_1:92624656-92624675 | None:intergenic | 30.0% |
| !! | GGTTTTTGTTTGGTCTATTA+GGG | + | chr6_1:92624657-92624676 | None:intergenic | 30.0% |
| !! | TGGTTTTTGTTTGGTCTATT+AGG | + | chr6_1:92624658-92624677 | None:intergenic | 30.0% |
| !! | GTTTTTGTTTAGCCTATTAG+GGG | - | chr6_1:92624708-92624727 | Msa0898490:intron | 30.0% |
| !! | TTTTTGTTTAGCCTATTAGG+GGG | - | chr6_1:92624709-92624728 | Msa0898490:intron | 30.0% |
| GGAAATGACATATATTACAG+AGG | - | chr6_1:92624795-92624814 | Msa0898490:intron | 30.0% | |
| AAATAAAATGCAAACTTGGG+AGG | - | chr6_1:92625065-92625084 | Msa0898490:intron | 30.0% | |
| TTATAAGCAAAATTGCAACG+AGG | - | chr6_1:92625173-92625192 | Msa0898490:intron | 30.0% | |
| CTAAATCGAGATTCTCATTA+AGG | - | chr6_1:92625200-92625219 | Msa0898490:intron | 30.0% | |
| TCATCGTCTATGAATGATTA+TGG | - | chr6_1:92625546-92625565 | Msa0898490:CDS | 30.0% | |
| CATCGTCTATGAATGATTAT+GGG | - | chr6_1:92625547-92625566 | Msa0898490:CDS | 30.0% | |
| TAACCCCCTATAAAAAAAGT+TGG | + | chr6_1:92625579-92625598 | None:intergenic | 30.0% | |
| GAATATGCTTTGCGTTTGTT+TGG | + | chr6_1:92623483-92623502 | None:intergenic | 35.0% | |
| GAACAATCACTACACAATCA+TGG | - | chr6_1:92623539-92623558 | Msa0898490:CDS | 35.0% | |
| ATCATGGCAAGCAACATAAA+TGG | - | chr6_1:92623555-92623574 | Msa0898490:CDS | 35.0% | |
| GACATAGAATTGTGATCCAA+CGG | + | chr6_1:92623676-92623695 | None:intergenic | 35.0% | |
| GATCACAATTCTATGTCAAC+TGG | - | chr6_1:92623679-92623698 | Msa0898490:intron | 35.0% | |
| ACCAATAAAACCTTCACCTT+AGG | - | chr6_1:92623705-92623724 | Msa0898490:intron | 35.0% | |
| !! | ACCTAAGGTGAAGGTTTTAT+TGG | + | chr6_1:92623709-92623728 | None:intergenic | 35.0% |
| ! | TGATTTTGTTACCTTTGCCA+CGG | + | chr6_1:92623854-92623873 | None:intergenic | 35.0% |
| ! | GGTGCTGGAAAAAAGATAAT+CGG | + | chr6_1:92624027-92624046 | None:intergenic | 35.0% |
| CCTAAATCTATATCAGTGGA+AGG | + | chr6_1:92624095-92624114 | None:intergenic | 35.0% | |
| CCTTCCACTGATATAGATTT+AGG | - | chr6_1:92624092-92624111 | Msa0898490:intron | 35.0% | |
| GTAGCCTAAATCTATATCAG+TGG | + | chr6_1:92624099-92624118 | None:intergenic | 35.0% | |
| !! | CATTTTAATATGGAGAACCG+GGG | - | chr6_1:92624271-92624290 | Msa0898490:intron | 35.0% |
| !! | AAATTTGTTAAGACGGCCTT+GGG | + | chr6_1:92624323-92624342 | None:intergenic | 35.0% |
| ACCACACAATCTTTCTCAAA+TGG | - | chr6_1:92624463-92624482 | Msa0898490:intron | 35.0% | |
| CCACACAATCTTTCTCAAAT+GGG | - | chr6_1:92624464-92624483 | Msa0898490:intron | 35.0% | |
| AAATGACCTATATTACAGGG+GGG | + | chr6_1:92624570-92624589 | None:intergenic | 35.0% | |
| GAAATGACCTATATTACAGG+GGG | + | chr6_1:92624571-92624590 | None:intergenic | 35.0% | |
| GGAAATGACCTATATTACAG+GGG | + | chr6_1:92624572-92624591 | None:intergenic | 35.0% | |
| CGGAAATGACCTATATTACA+GGG | + | chr6_1:92624573-92624592 | None:intergenic | 35.0% | |
| CCTGTAATATAGGTCATTTC+CGG | - | chr6_1:92624571-92624590 | Msa0898490:intron | 35.0% | |
| !! | TTTTGTTTGGTCTATTAGGG+GGG | + | chr6_1:92624654-92624673 | None:intergenic | 35.0% |
| !! | TTTTGTTTAGCCTATTAGGG+GGG | - | chr6_1:92624710-92624729 | Msa0898490:intron | 35.0% |
| !!! | TTTTGATTTACCCCCCTAAT+AGG | + | chr6_1:92624723-92624742 | None:intergenic | 35.0% |
| ! | TCATTGCTTGCGATTTTACA+GGG | + | chr6_1:92625098-92625117 | None:intergenic | 35.0% |
| ! | TTCATTGCTTGCGATTTTAC+AGG | + | chr6_1:92625099-92625118 | None:intergenic | 35.0% |
| AATCGCAAGCAATGAATCAT+TGG | - | chr6_1:92625103-92625122 | Msa0898490:intron | 35.0% | |
| GAGATTCTCATTAAGGATTG+CGG | - | chr6_1:92625207-92625226 | Msa0898490:intron | 35.0% | |
| !! | GCTTTTAAGGATTCGAGTTA+AGG | - | chr6_1:92625268-92625287 | Msa0898490:intron | 35.0% |
| ! | GGATTCGAGTTAAGGATAAA+TGG | - | chr6_1:92625276-92625295 | Msa0898490:intron | 35.0% |
| TACGTGGGAAAACTAAATCT+GGG | + | chr6_1:92625735-92625754 | None:intergenic | 35.0% | |
| ATACGTGGGAAAACTAAATC+TGG | + | chr6_1:92625736-92625755 | None:intergenic | 35.0% | |
| !! | TTGGCTTTGAATTCATATGC+AGG | - | chr6_1:92625777-92625796 | Msa0898490:intron | 35.0% |
| TGTAGCACGATGAATTTGTA+GGG | + | chr6_1:92625990-92626009 | None:intergenic | 35.0% | |
| TTGTAGCACGATGAATTTGT+AGG | + | chr6_1:92625991-92626010 | None:intergenic | 35.0% | |
| AGAATTGTGATCCAACGGTT+GGG | + | chr6_1:92623671-92623690 | None:intergenic | 40.0% | |
| TAGAATTGTGATCCAACGGT+TGG | + | chr6_1:92623672-92623691 | None:intergenic | 40.0% | |
| TCAGCTTTCGATAGTTGCAA+TGG | - | chr6_1:92623871-92623890 | Msa0898490:intron | 40.0% | |
| TATGACAAATCCTCCAGCTA+AGG | - | chr6_1:92623912-92623931 | Msa0898490:intron | 40.0% | |
| AATTCTAGTATGGTCGAGAC+AGG | - | chr6_1:92624180-92624199 | Msa0898490:intron | 40.0% | |
| TACTTTGAACATAGTCCCCT+CGG | + | chr6_1:92624212-92624231 | None:intergenic | 40.0% | |
| TTGGTAAGTAATCTAGTGGG+TGG | - | chr6_1:92624240-92624259 | Msa0898490:intron | 40.0% | |
| !! | CAAATTTGTTAAGACGGCCT+TGG | + | chr6_1:92624324-92624343 | None:intergenic | 40.0% |
| GAGAAAGATTGTGTGGTTGT+GGG | + | chr6_1:92624460-92624479 | None:intergenic | 40.0% | |
| TGAGAAAGATTGTGTGGTTG+TGG | + | chr6_1:92624461-92624480 | None:intergenic | 40.0% | |
| CCCATTTGAGAAAGATTGTG+TGG | + | chr6_1:92624467-92624486 | None:intergenic | 40.0% | |
| AACAAGTTACCGAGCTTCAA+TGG | + | chr6_1:92624494-92624513 | None:intergenic | 40.0% | |
| AATGACCTATATTACAGGGG+GGG | + | chr6_1:92624569-92624588 | None:intergenic | 40.0% | |
| CCGGAAATGACCTATATTAC+AGG | + | chr6_1:92624574-92624593 | None:intergenic | 40.0% | |
| CATAATATATGCAGGGGTCA+GGG | + | chr6_1:92624932-92624951 | None:intergenic | 40.0% | |
| ACATAATATATGCAGGGGTC+AGG | + | chr6_1:92624933-92624952 | None:intergenic | 40.0% | |
| AAGCAATGAATCATTGGTGG+TGG | - | chr6_1:92625109-92625128 | Msa0898490:intron | 40.0% | |
| AATTGAGCTATTGTCAGCAG+TGG | + | chr6_1:92625891-92625910 | None:intergenic | 40.0% | |
| !! | AAGAATGTTAGCATCGGTGT+TGG | + | chr6_1:92625941-92625960 | None:intergenic | 40.0% |
| GGCGATAAGAATGTTAGCAT+CGG | + | chr6_1:92625947-92625966 | None:intergenic | 40.0% | |
| TAGCACGATGAATTTGTAGG+GGG | + | chr6_1:92625988-92626007 | None:intergenic | 40.0% | |
| GTAGCACGATGAATTTGTAG+GGG | + | chr6_1:92625989-92626008 | None:intergenic | 40.0% | |
| CAAATTCATCGTGCTACAAC+AGG | - | chr6_1:92625992-92626011 | Msa0898490:exon | 40.0% | |
| !!! | TGGAGTTGCCCTTGTTTTCT+AGG | + | chr6_1:92623505-92623524 | None:intergenic | 45.0% |
| TTGCTACGGATCCATGAAGA+AGG | + | chr6_1:92623611-92623630 | None:intergenic | 45.0% | |
| ! | CACGGTGAAGGTTTTTGCTA+CGG | + | chr6_1:92623625-92623644 | None:intergenic | 45.0% |
| GTAGCAAAAACCTTCACCGT+GGG | - | chr6_1:92623624-92623643 | Msa0898490:CDS | 45.0% | |
| !! | AAGAGTGTCACCTAAGGTGA+AGG | + | chr6_1:92623718-92623737 | None:intergenic | 45.0% |
| TTCACCTTAGGTGACACTCT+TGG | - | chr6_1:92623717-92623736 | Msa0898490:intron | 45.0% | |
| !! | CATACCAAGAGTGTCACCTA+AGG | + | chr6_1:92623724-92623743 | None:intergenic | 45.0% |
| TGTCATAACCACAAGTGCGT+TGG | + | chr6_1:92623899-92623918 | None:intergenic | 45.0% | |
| AGCAGAACAGTGACCAGTAA+CGG | + | chr6_1:92623977-92623996 | None:intergenic | 45.0% | |
| GTGAAGTACATACCAGTAGC+AGG | + | chr6_1:92624072-92624091 | None:intergenic | 45.0% | |
| ACTTTGAACATAGTCCCCTC+GGG | + | chr6_1:92624211-92624230 | None:intergenic | 45.0% | |
| GATTTGAACTCCAAACTCCC+CGG | + | chr6_1:92624291-92624310 | None:intergenic | 45.0% | |
| CTTTACCCCCCCTGTAATAT+AGG | - | chr6_1:92624561-92624580 | Msa0898490:intron | 45.0% | |
| TTTGGGCCCCAAAAAAATCG+AGG | - | chr6_1:92624880-92624899 | Msa0898490:intron | 45.0% | |
| !!! | ACTGGGCCTCGATTTTTTTG+GGG | + | chr6_1:92624889-92624908 | None:intergenic | 45.0% |
| !!! | CACTGGGCCTCGATTTTTTT+GGG | + | chr6_1:92624890-92624909 | None:intergenic | 45.0% |
| TGAGCTTAGTTCAGTTGGCA+GGG | + | chr6_1:92624961-92624980 | None:intergenic | 45.0% | |
| CGCAAGCAATGAATCATTGG+TGG | - | chr6_1:92625106-92625125 | Msa0898490:intron | 45.0% | |
| TAGCCAGGGATGAGTTAGAA+GGG | + | chr6_1:92625476-92625495 | None:intergenic | 45.0% | |
| GTGAATACTTCTCGTAGCCA+GGG | + | chr6_1:92625490-92625509 | None:intergenic | 45.0% | |
| AGTGAATACTTCTCGTAGCC+AGG | + | chr6_1:92625491-92625510 | None:intergenic | 45.0% | |
| TAAACCGAAATTCGTCCCAC+TGG | - | chr6_1:92625597-92625616 | Msa0898490:CDS | 45.0% | |
| ! | AATGGTTTTCCTCTGCCAGT+GGG | + | chr6_1:92625615-92625634 | None:intergenic | 45.0% |
| ! | TAATGGTTTTCCTCTGCCAG+TGG | + | chr6_1:92625616-92625635 | None:intergenic | 45.0% |
| CTATTGTCAGCAGTGGCATT+GGG | + | chr6_1:92625884-92625903 | None:intergenic | 45.0% | |
| ! | GGGAAATTCGACAATGGACT+TGG | + | chr6_1:92625968-92625987 | None:intergenic | 45.0% |
| TGTAGGGGGAAATTCGACAA+TGG | + | chr6_1:92625974-92625993 | None:intergenic | 45.0% | |
| !! | TGAAAAAAAATAAATTAAAT+TGG | + | chr6_1:92624678-92624697 | None:intergenic | 5.0% |
| !!! | AAATGAAAAAATATTTTATA+AGG | - | chr6_1:92624763-92624782 | Msa0898490:intron | 5.0% |
| !! | TGTTTTTGTGCTGCTCGCAG+TGG | - | chr6_1:92623581-92623600 | Msa0898490:CDS | 50.0% |
| GCAGTGGCTAACCTTCTTCA+TGG | - | chr6_1:92623597-92623616 | Msa0898490:CDS | 50.0% | |
| CGTAGCAAAAACCTTCACCG+TGG | - | chr6_1:92623623-92623642 | Msa0898490:CDS | 50.0% | |
| TAAGTCATCACCCACGGTGA+AGG | + | chr6_1:92623637-92623656 | None:intergenic | 50.0% | |
| TTCACCGTGGGTGATGACTT+AGG | - | chr6_1:92623636-92623655 | Msa0898490:CDS | 50.0% | |
| TCAATTGAATGCACACGCCG+TGG | - | chr6_1:92623834-92623853 | Msa0898490:intron | 50.0% | |
| CAATGGAACCAACGCACTTG+TGG | - | chr6_1:92623888-92623907 | Msa0898490:intron | 50.0% | |
| ATGAGAGACACCTTAGCTGG+AGG | + | chr6_1:92623925-92623944 | None:intergenic | 50.0% | |
| CTCATGAGAGACACCTTAGC+TGG | + | chr6_1:92623928-92623947 | None:intergenic | 50.0% | |
| GTTACTGGTCACTGTTCTGC+TGG | - | chr6_1:92623976-92623995 | Msa0898490:intron | 50.0% | |
| TACATACCAGTAGCAGGAGC+GGG | + | chr6_1:92624066-92624085 | None:intergenic | 50.0% | |
| GTACATACCAGTAGCAGGAG+CGG | + | chr6_1:92624067-92624086 | None:intergenic | 50.0% | |
| TCGAGACAGGAATTACCCGA+GGG | - | chr6_1:92624193-92624212 | Msa0898490:intron | 50.0% | |
| ATATGGAGAACCGGGGAGTT+TGG | - | chr6_1:92624278-92624297 | Msa0898490:intron | 50.0% | |
| TCAAATCTCAACCCCTCCCA+AGG | - | chr6_1:92624304-92624323 | Msa0898490:intron | 50.0% | |
| TTGTTAAGACGGCCTTGGGA+GGG | + | chr6_1:92624319-92624338 | None:intergenic | 50.0% | |
| TTTGTTAAGACGGCCTTGGG+AGG | + | chr6_1:92624320-92624339 | None:intergenic | 50.0% | |
| ATGGGCGTACCATTGAAGCT+CGG | - | chr6_1:92624482-92624501 | Msa0898490:intron | 50.0% | |
| !!! | CCACTGGGCCTCGATTTTTT+TGG | + | chr6_1:92624891-92624910 | None:intergenic | 50.0% |
| CCAAAAAAATCGAGGCCCAG+TGG | - | chr6_1:92624888-92624907 | Msa0898490:intron | 50.0% | |
| GTGAGCTTAGTTCAGTTGGC+AGG | + | chr6_1:92624962-92624981 | None:intergenic | 50.0% | |
| CCTCGTGAGCTTAGTTCAGT+TGG | + | chr6_1:92624966-92624985 | None:intergenic | 50.0% | |
| CCAACTGAACTAAGCTCACG+AGG | - | chr6_1:92624963-92624982 | Msa0898490:intron | 50.0% | |
| GTTAGAAGGGGGATCAGTAG+AGG | + | chr6_1:92625463-92625482 | None:intergenic | 50.0% | |
| AGCCAGGGATGAGTTAGAAG+GGG | + | chr6_1:92625475-92625494 | None:intergenic | 50.0% | |
| GTAGCCAGGGATGAGTTAGA+AGG | + | chr6_1:92625477-92625496 | None:intergenic | 50.0% | |
| TCTGCCAGTGGGACGAATTT+CGG | + | chr6_1:92625604-92625623 | None:intergenic | 50.0% | |
| GCTATTGTCAGCAGTGGCAT+TGG | + | chr6_1:92625885-92625904 | None:intergenic | 50.0% | |
| !! | ATCGGTGTTGGTGTTGGTGT+CGG | + | chr6_1:92625929-92625948 | None:intergenic | 50.0% |
| !! | GTTAGCATCGGTGTTGGTGT+TGG | + | chr6_1:92625935-92625954 | None:intergenic | 50.0% |
| CCAGCCTAAGTCATCACCCA+CGG | + | chr6_1:92623643-92623662 | None:intergenic | 55.0% | |
| GGCTGGATTATCCCAACCGT+TGG | - | chr6_1:92623657-92623676 | Msa0898490:CDS | 55.0% | |
| GAAATAGTGGCAGGTGGTGC+TGG | + | chr6_1:92624042-92624061 | None:intergenic | 55.0% | |
| AGCAGGAGCGGGTGAAATAG+TGG | + | chr6_1:92624055-92624074 | None:intergenic | 55.0% | |
| ATTTCACCCGCTCCTGCTAC+TGG | - | chr6_1:92624057-92624076 | Msa0898490:intron | 55.0% | |
| GTCGAGACAGGAATTACCCG+AGG | - | chr6_1:92624192-92624211 | Msa0898490:intron | 55.0% | |
| CGAGACAGGAATTACCCGAG+GGG | - | chr6_1:92624194-92624213 | Msa0898490:intron | 55.0% | |
| TGTTAAGACGGCCTTGGGAG+GGG | + | chr6_1:92624318-92624337 | None:intergenic | 55.0% | |
| AGGGGGATCAGTAGAGGTCA+CGG | + | chr6_1:92625457-92625476 | None:intergenic | 55.0% | |
| TCCCCCTTCTAACTCATCCC+TGG | - | chr6_1:92625470-92625489 | Msa0898490:intron | 55.0% | |
| GCCAGGGATGAGTTAGAAGG+GGG | + | chr6_1:92625474-92625493 | None:intergenic | 55.0% | |
| GAAATTCGTCCCACTGGCAG+AGG | - | chr6_1:92625603-92625622 | Msa0898490:intron | 55.0% | |
| !! | TTGGTGTTGGTGTCGGTGTC+GGG | + | chr6_1:92625922-92625941 | None:intergenic | 55.0% |
| !! | GTTGGTGTTGGTGTCGGTGT+CGG | + | chr6_1:92625923-92625942 | None:intergenic | 55.0% |
| CCGTGGGTGATGACTTAGGC+TGG | - | chr6_1:92623640-92623659 | Msa0898490:CDS | 60.0% | |
| GAATGCACACGCCGTGGCAA+AGG | - | chr6_1:92623840-92623859 | Msa0898490:intron | 60.0% | |
| GCGGGTGAAATAGTGGCAGG+TGG | + | chr6_1:92624048-92624067 | None:intergenic | 60.0% | |
| GGAGCGGGTGAAATAGTGGC+AGG | + | chr6_1:92624051-92624070 | None:intergenic | 60.0% | |
| AAATCGAGGCCCAGTGGCGA+CGG | - | chr6_1:92624894-92624913 | Msa0898490:intron | 60.0% | |
| !! | TGGTGTTGGTGTCGGTGTCG+GGG | + | chr6_1:92625921-92625940 | None:intergenic | 60.0% |
| AATCGAGGCCCAGTGGCGAC+GGG | - | chr6_1:92624895-92624914 | Msa0898490:intron | 65.0% | |
| ACCCATAGCCCGTCGCCACT+GGG | + | chr6_1:92624906-92624925 | None:intergenic | 65.0% | |
| !! | GCCCAGTGGCGACGGGCTAT+GGG | - | chr6_1:92624902-92624921 | Msa0898490:intron | 70.0% |
| GACCCATAGCCCGTCGCCAC+TGG | + | chr6_1:92624907-92624926 | None:intergenic | 70.0% | |
| !! | GGCCCAGTGGCGACGGGCTA+TGG | - | chr6_1:92624901-92624920 | Msa0898490:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 92623434 | 92626120 | 92623434 | ID=Msa0898490;Name=Msa0898490 |
| chr6_1 | mRNA | 92623434 | 92626120 | 92623434 | ID=Msa0898490-mRNA-1;Parent=Msa0898490;Name=Msa0898490-mRNA-1;_AED=0.03;_eAED=0.03;_QI=124|0.66|0.5|1|0.33|0.25|4|0|225 |
| chr6_1 | exon | 92623434 | 92623696 | 92623434 | ID=Msa0898490-mRNA-1:exon:15629;Parent=Msa0898490-mRNA-1 |
| chr6_1 | exon | 92625476 | 92625620 | 92625476 | ID=Msa0898490-mRNA-1:exon:15628;Parent=Msa0898490-mRNA-1 |
| chr6_1 | exon | 92625645 | 92625730 | 92625645 | ID=Msa0898490-mRNA-1:exon:15627;Parent=Msa0898490-mRNA-1 |
| chr6_1 | exon | 92625816 | 92626120 | 92625816 | ID=Msa0898490-mRNA-1:exon:15626;Parent=Msa0898490-mRNA-1 |
| chr6_1 | five_prime_UTR | 92625997 | 92626120 | 92625997 | ID=Msa0898490-mRNA-1:five_prime_utr;Parent=Msa0898490-mRNA-1 |
| chr6_1 | CDS | 92625816 | 92625996 | 92625816 | ID=Msa0898490-mRNA-1:cds;Parent=Msa0898490-mRNA-1 |
| chr6_1 | CDS | 92625645 | 92625730 | 92625645 | ID=Msa0898490-mRNA-1:cds;Parent=Msa0898490-mRNA-1 |
| chr6_1 | CDS | 92625476 | 92625620 | 92625476 | ID=Msa0898490-mRNA-1:cds;Parent=Msa0898490-mRNA-1 |
| chr6_1 | CDS | 92623434 | 92623696 | 92623434 | ID=Msa0898490-mRNA-1:cds;Parent=Msa0898490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
