Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005190 | Msa0008700 | 0.829535 | 4.876503e-55 | -8.615850e-47 |
| Msa0007160 | Msa0008700 | 0.803757 | 2.993450e-49 | -8.615850e-47 |
| Msa0007570 | Msa0008700 | 0.807343 | 5.295515e-50 | -8.615850e-47 |
| Msa0008700 | Msa0016380 | 0.803181 | 3.940253e-49 | -8.615850e-47 |
| Msa0008700 | Msa0018610 | 0.802289 | 6.022210e-49 | -8.615850e-47 |
| Msa0008700 | Msa0018870 | 0.821757 | 3.407449e-53 | -8.615850e-47 |
| Msa0008700 | Msa0025340 | 0.803691 | 3.088877e-49 | -8.615850e-47 |
| Msa0008700 | Msa0032990 | 0.806480 | 8.060332e-50 | -8.615850e-47 |
| Msa0008700 | Msa0039780 | 0.808296 | 3.320558e-50 | -8.615850e-47 |
| Msa0008700 | Msa0042500 | 0.809474 | 1.858990e-50 | -8.615850e-47 |
| Msa0008700 | Msa0046700 | 0.827361 | 1.632764e-54 | -8.615850e-47 |
| Msa0008700 | Msa0057340 | 0.816714 | 4.797004e-52 | -8.615850e-47 |
| Msa0008700 | Msa0057740 | 0.809165 | 2.165017e-50 | -8.615850e-47 |
| Msa0008700 | Msa0070580 | 0.805122 | 1.554726e-49 | -8.615850e-47 |
| Msa0008700 | Msa0072910 | 0.801879 | 7.312473e-49 | -8.615850e-47 |
| Msa0008700 | Msa0079570 | 0.807912 | 4.008811e-50 | -8.615850e-47 |
| Msa0008700 | Msa0080620 | 0.806790 | 6.933276e-50 | -8.615850e-47 |
| Msa0008700 | Msa0087370 | 0.809398 | 1.929730e-50 | -8.615850e-47 |
| Msa0008700 | Msa0089470 | 0.808508 | 2.992765e-50 | -8.615850e-47 |
| Msa0008700 | Msa0098960 | 0.840955 | 6.366156e-58 | -8.615850e-47 |
| Msa0008700 | Msa0103060 | 0.810593 | 1.067387e-50 | -8.615850e-47 |
| Msa0008700 | Msa0112340 | 0.829052 | 6.385981e-55 | -8.615850e-47 |
| Msa0008700 | Msa0114960 | 0.812870 | 3.409721e-51 | -8.615850e-47 |
| Msa0008700 | Msa0116950 | 0.826641 | 2.426161e-54 | -8.615850e-47 |
| Msa0008700 | Msa0118700 | 0.809654 | 1.700557e-50 | -8.615850e-47 |
| Msa0008700 | Msa0131230 | 0.814690 | 1.355261e-51 | -8.615850e-47 |
| Msa0008700 | Msa0132920 | 0.807394 | 5.163675e-50 | -8.615850e-47 |
| Msa0008700 | Msa0134120 | 0.807514 | 4.870526e-50 | -8.615850e-47 |
| Msa0008700 | Msa0140870 | 0.808627 | 2.821779e-50 | -8.615850e-47 |
| Msa0008700 | Msa0147070 | 0.811625 | 6.376326e-51 | -8.615850e-47 |
| Msa0008700 | Msa0156780 | 0.849530 | 3.047858e-60 | -8.615850e-47 |
| Msa0008700 | Msa0160080 | 0.826267 | 2.978986e-54 | -8.615850e-47 |
| Msa0008700 | Msa0164310 | 0.807014 | 6.215534e-50 | -8.615850e-47 |
| Msa0008700 | Msa0168470 | 0.815557 | 8.695893e-52 | -8.615850e-47 |
| Msa0008700 | Msa0170640 | 0.801228 | 9.942908e-49 | -8.615850e-47 |
| Msa0008700 | Msa0170690 | 0.816583 | 5.132772e-52 | -8.615850e-47 |
| Msa0008700 | Msa0170730 | 0.805832 | 1.103438e-49 | -8.615850e-47 |
| Msa0008700 | Msa0174800 | 0.832041 | 1.185199e-55 | -8.615850e-47 |
| Msa0008700 | Msa0178440 | 0.804713 | 1.893128e-49 | -8.615850e-47 |
| Msa0008700 | Msa0180590 | 0.801269 | 9.748785e-49 | -8.615850e-47 |
| Msa0008700 | Msa0182940 | 0.802548 | 5.325845e-49 | -8.615850e-47 |
| Msa0008700 | Msa0186380 | 0.819791 | 9.648727e-53 | -8.615850e-47 |
| Msa0008700 | Msa0186750 | 0.803869 | 2.836600e-49 | -8.615850e-47 |
| Msa0008700 | Msa0194420 | 0.819169 | 1.337345e-52 | -8.615850e-47 |
| Msa0008700 | Msa0208710 | 0.812042 | 5.172922e-51 | -8.615850e-47 |
| Msa0008700 | Msa0211600 | 0.831797 | 1.361644e-55 | -8.615850e-47 |
| Msa0008700 | Msa0243160 | 0.842769 | 2.112350e-58 | -8.615850e-47 |
| Msa0008700 | Msa0244320 | 0.818063 | 2.383791e-52 | -8.615850e-47 |
| Msa0008700 | Msa0244370 | 0.808845 | 2.535491e-50 | -8.615850e-47 |
| Msa0008700 | Msa0249670 | 0.827265 | 1.720726e-54 | -8.615850e-47 |
| Msa0008700 | Msa0252150 | 0.809383 | 1.944194e-50 | -8.615850e-47 |
| Msa0008700 | Msa0256070 | 0.815221 | 1.033030e-51 | -8.615850e-47 |
| Msa0008700 | Msa0256120 | 0.821540 | 3.823932e-53 | -8.615850e-47 |
| Msa0008700 | Msa0260930 | 0.833424 | 5.376301e-56 | -8.615850e-47 |
| Msa0008700 | Msa0270230 | 0.810083 | 1.374592e-50 | -8.615850e-47 |
| Msa0008700 | Msa0273780 | 0.813663 | 2.283687e-51 | -8.615850e-47 |
| Msa0008700 | Msa0278080 | 0.812879 | 3.395511e-51 | -8.615850e-47 |
| Msa0008700 | Msa0290600 | 0.824483 | 7.875240e-54 | -8.615850e-47 |
| Msa0008700 | Msa0298590 | 0.805416 | 1.349227e-49 | -8.615850e-47 |
| Msa0008700 | Msa0307820 | 0.814758 | 1.309049e-51 | -8.615850e-47 |
| Msa0008700 | Msa0317360 | 0.811928 | 5.478781e-51 | -8.615850e-47 |
| Msa0008700 | Msa0317630 | 0.812914 | 3.336187e-51 | -8.615850e-47 |
| Msa0008700 | Msa0321200 | 0.801924 | 7.157282e-49 | -8.615850e-47 |
| Msa0008700 | Msa0324060 | 0.829955 | 3.852382e-55 | -8.615850e-47 |
| Msa0008700 | Msa0327870 | 0.805082 | 1.585080e-49 | -8.615850e-47 |
| Msa0008700 | Msa0335860 | 0.837860 | 4.050263e-57 | -8.615850e-47 |
| Msa0008700 | Msa0361040 | 0.832780 | 7.776637e-56 | -8.615850e-47 |
| Msa0008700 | Msa0363090 | 0.807521 | 4.852573e-50 | -8.615850e-47 |
| Msa0008700 | Msa0365350 | 0.820582 | 6.355896e-53 | -8.615850e-47 |
| Msa0008700 | Msa0385770 | 0.805927 | 1.053889e-49 | -8.615850e-47 |
| Msa0008700 | Msa0385870 | 0.825839 | 3.765846e-54 | -8.615850e-47 |
| Msa0008700 | Msa0387120 | 0.805103 | 1.569097e-49 | -8.615850e-47 |
| Msa0008700 | Msa0402490 | 0.803133 | 4.031609e-49 | -8.615850e-47 |
| Msa0008700 | Msa0408490 | 0.821591 | 3.722574e-53 | -8.615850e-47 |
| Msa0008700 | Msa0411260 | 0.802553 | 5.312095e-49 | -8.615850e-47 |
| Msa0008700 | Msa0413230 | 0.822156 | 2.753919e-53 | -8.615850e-47 |
| Msa0008700 | Msa0416530 | 0.820082 | 8.274494e-53 | -8.615850e-47 |
| Msa0008700 | Msa0416880 | 0.817646 | 2.960247e-52 | -8.615850e-47 |
| Msa0008700 | Msa0420280 | 0.834123 | 3.595241e-56 | -8.615850e-47 |
| Msa0008700 | Msa0421100 | 0.822186 | 2.709819e-53 | -8.615850e-47 |
| Msa0008700 | Msa0426860 | 0.809882 | 1.519311e-50 | -8.615850e-47 |
| Msa0008700 | Msa0426890 | 0.815871 | 7.404632e-52 | -8.615850e-47 |
| Msa0008700 | Msa0433270 | 0.828905 | 6.932172e-55 | -8.615850e-47 |
| Msa0008700 | Msa0433890 | 0.805293 | 1.431373e-49 | -8.615850e-47 |
| Msa0008700 | Msa0440720 | 0.815789 | 7.721009e-52 | -8.615850e-47 |
| Msa0008700 | Msa0443250 | 0.807200 | 5.676340e-50 | -8.615850e-47 |
| Msa0008700 | Msa0446110 | 0.802378 | 5.772178e-49 | -8.615850e-47 |
| Msa0008700 | Msa0447810 | 0.805282 | 1.439305e-49 | -8.615850e-47 |
| Msa0008700 | Msa0450890 | 0.811065 | 8.434493e-51 | -8.615850e-47 |
| Msa0008700 | Msa0453610 | 0.810710 | 1.006932e-50 | -8.615850e-47 |
| Msa0008700 | Msa0461150 | 0.813070 | 3.083284e-51 | -8.615850e-47 |
| Msa0008700 | Msa0466830 | 0.834777 | 2.463550e-56 | -8.615850e-47 |
| Msa0008700 | Msa0469770 | 0.822509 | 2.281004e-53 | -8.615850e-47 |
| Msa0008700 | Msa0469840 | 0.836566 | 8.682563e-57 | -8.615850e-47 |
| Msa0008700 | Msa0474220 | 0.805070 | 1.593760e-49 | -8.615850e-47 |
| Msa0008700 | Msa0481580 | 0.848971 | 4.362595e-60 | -8.615850e-47 |
| Msa0008700 | Msa0486850 | 0.805706 | 1.172846e-49 | -8.615850e-47 |
| Msa0008700 | Msa0488900 | 0.800810 | 1.210429e-48 | -8.615850e-47 |
| Msa0008700 | Msa0497060 | 0.801283 | 9.684711e-49 | -8.615850e-47 |
| Msa0008700 | Msa0498320 | 0.803265 | 3.785495e-49 | -8.615850e-47 |
| Msa0008700 | Msa0501540 | 0.809102 | 2.233958e-50 | -8.615850e-47 |
| Msa0008700 | Msa0501770 | 0.810505 | 1.114820e-50 | -8.615850e-47 |
| Msa0008700 | Msa0504640 | 0.831677 | 1.458043e-55 | -8.615850e-47 |
| Msa0008700 | Msa0513660 | 0.823605 | 1.266216e-53 | -8.615850e-47 |
| Msa0008700 | Msa0515400 | 0.832493 | 9.160791e-56 | -8.615850e-47 |
| Msa0008700 | Msa0515420 | 0.827316 | 1.673174e-54 | -8.615850e-47 |
| Msa0008700 | Msa0521190 | 0.812162 | 4.871296e-51 | -8.615850e-47 |
| Msa0008700 | Msa0523400 | 0.818362 | 2.038992e-52 | -8.615850e-47 |
| Msa0008700 | Msa0532750 | 0.839143 | 1.890377e-57 | -8.615850e-47 |
| Msa0008700 | Msa0532910 | 0.802400 | 5.711629e-49 | -8.615850e-47 |
| Msa0008700 | Msa0537960 | 0.805516 | 1.285353e-49 | -8.615850e-47 |
| Msa0008700 | Msa0538020 | 0.829008 | 6.544996e-55 | -8.615850e-47 |
| Msa0008700 | Msa0539900 | 0.826551 | 2.549188e-54 | -8.615850e-47 |
| Msa0008700 | Msa0552660 | 0.811028 | 8.591475e-51 | -8.615850e-47 |
| Msa0008700 | Msa0558220 | 0.821409 | 4.100451e-53 | -8.615850e-47 |
| Msa0008700 | Msa0560380 | 0.810599 | 1.064183e-50 | -8.615850e-47 |
| Msa0008700 | Msa0565930 | 0.809003 | 2.345601e-50 | -8.615850e-47 |
| Msa0008700 | Msa0568490 | 0.805701 | 1.175347e-49 | -8.615850e-47 |
| Msa0008700 | Msa0573970 | 0.803206 | 3.893237e-49 | -8.615850e-47 |
| Msa0008700 | Msa0574230 | 0.818902 | 1.537886e-52 | -8.615850e-47 |
| Msa0008700 | Msa0576510 | 0.808834 | 2.549092e-50 | -8.615850e-47 |
| Msa0008700 | Msa0583810 | 0.813071 | 3.081324e-51 | -8.615850e-47 |
| Msa0008700 | Msa0587060 | 0.810474 | 1.132279e-50 | -8.615850e-47 |
| Msa0008700 | Msa0597370 | 0.803832 | 2.887482e-49 | -8.615850e-47 |
| Msa0008700 | Msa0598610 | 0.803086 | 4.122725e-49 | -8.615850e-47 |
| Msa0008700 | Msa0606200 | 0.808775 | 2.624411e-50 | -8.615850e-47 |
| Msa0008700 | Msa0606380 | 0.858842 | 6.240731e-63 | -8.615850e-47 |
| Msa0008700 | Msa0619480 | 0.813748 | 2.188049e-51 | -8.615850e-47 |
| Msa0008700 | Msa0623350 | 0.805418 | 1.347792e-49 | -8.615850e-47 |
| Msa0008700 | Msa0624260 | 0.835157 | 1.975367e-56 | -8.615850e-47 |
| Msa0008700 | Msa0624360 | 0.838612 | 2.592637e-57 | -8.615850e-47 |
| Msa0008700 | Msa0625900 | 0.805087 | 1.581238e-49 | -8.615850e-47 |
| Msa0008700 | Msa0626900 | 0.806465 | 8.118786e-50 | -8.615850e-47 |
| Msa0008700 | Msa0628840 | 0.826229 | 3.041485e-54 | -8.615850e-47 |
| Msa0008700 | Msa0630910 | 0.852281 | 5.117981e-61 | -8.615850e-47 |
| Msa0008700 | Msa0634900 | 0.810925 | 9.045849e-51 | -8.615850e-47 |
| Msa0008700 | Msa0640780 | 0.801014 | 1.099488e-48 | -8.615850e-47 |
| Msa0008700 | Msa0644220 | 0.809166 | 2.163672e-50 | -8.615850e-47 |
| Msa0008700 | Msa0644610 | 0.803913 | 2.778580e-49 | -8.615850e-47 |
| Msa0008700 | Msa0657820 | 0.809092 | 2.245158e-50 | -8.615850e-47 |
| Msa0008700 | Msa0659360 | 0.801832 | 7.474690e-49 | -8.615850e-47 |
| Msa0008700 | Msa0659640 | 0.814940 | 1.192951e-51 | -8.615850e-47 |
| Msa0008700 | Msa0662140 | 0.810431 | 1.156754e-50 | -8.615850e-47 |
| Msa0008700 | Msa0663580 | 0.800324 | 1.520016e-48 | -8.615850e-47 |
| Msa0008700 | Msa0663690 | 0.806408 | 8.346282e-50 | -8.615850e-47 |
| Msa0008700 | Msa0665040 | 0.817346 | 3.457836e-52 | -8.615850e-47 |
| Msa0008700 | Msa0667710 | 0.801103 | 1.054459e-48 | -8.615850e-47 |
| Msa0008700 | Msa0670490 | 0.802536 | 5.354968e-49 | -8.615850e-47 |
| Msa0008700 | Msa0677110 | 0.800951 | 1.132402e-48 | -8.615850e-47 |
| Msa0008700 | Msa0697230 | 0.800215 | 1.600296e-48 | -8.615850e-47 |
| Msa0008700 | Msa0697610 | 0.830404 | 2.994088e-55 | -8.615850e-47 |
| Msa0008700 | Msa0707870 | 0.802249 | 6.137198e-49 | -8.615850e-47 |
| Msa0008700 | Msa0712670 | 0.813960 | 1.964809e-51 | -8.615850e-47 |
| Msa0008700 | Msa0714060 | 0.819298 | 1.249783e-52 | -8.615850e-47 |
| Msa0008700 | Msa0714200 | 0.823084 | 1.675463e-53 | -8.615850e-47 |
| Msa0008700 | Msa0729740 | 0.814837 | 1.257101e-51 | -8.615850e-47 |
| Msa0008700 | Msa0730250 | 0.810980 | 8.798691e-51 | -8.615850e-47 |
| Msa0008700 | Msa0745010 | 0.800525 | 1.383743e-48 | -8.615850e-47 |
| Msa0008700 | Msa0754840 | 0.806346 | 8.599928e-50 | -8.615850e-47 |
| Msa0008700 | Msa0756440 | 0.805523 | 1.281449e-49 | -8.615850e-47 |
| Msa0008700 | Msa0760160 | 0.801793 | 7.613508e-49 | -8.615850e-47 |
| Msa0008700 | Msa0760230 | 0.825177 | 5.402968e-54 | -8.615850e-47 |
| Msa0008700 | Msa0761930 | 0.801278 | 9.709827e-49 | -8.615850e-47 |
| Msa0008700 | Msa0765190 | 0.820947 | 5.239661e-53 | -8.615850e-47 |
| Msa0008700 | Msa0766880 | 0.822137 | 2.782415e-53 | -8.615850e-47 |
| Msa0008700 | Msa0770050 | 0.808080 | 3.692428e-50 | -8.615850e-47 |
| Msa0008700 | Msa0770540 | 0.814154 | 1.779759e-51 | -8.615850e-47 |
| Msa0008700 | Msa0776590 | 0.804389 | 2.211548e-49 | -8.615850e-47 |
| Msa0008700 | Msa0790380 | 0.804472 | 2.125052e-49 | -8.615850e-47 |
| Msa0008700 | Msa0800400 | 0.808640 | 2.803904e-50 | -8.615850e-47 |
| Msa0008700 | Msa0808500 | 0.857808 | 1.268516e-62 | -8.615850e-47 |
| Msa0008700 | Msa0828730 | 0.808063 | 3.723706e-50 | -8.615850e-47 |
| Msa0008700 | Msa0833910 | 0.800332 | 1.514392e-48 | -8.615850e-47 |
| Msa0008700 | Msa0834160 | 0.803521 | 3.350621e-49 | -8.615850e-47 |
| Msa0008700 | Msa0854190 | 0.816698 | 4.836725e-52 | -8.615850e-47 |
| Msa0008700 | Msa0866510 | 0.803827 | 2.894448e-49 | -8.615850e-47 |
| Msa0008700 | Msa0872110 | 0.803748 | 3.006037e-49 | -8.615850e-47 |
| Msa0008700 | Msa0873070 | 0.865063 | 7.747312e-65 | -8.615850e-47 |
| Msa0008700 | Msa0876030 | 0.811489 | 6.824299e-51 | -8.615850e-47 |
| Msa0008700 | Msa0880310 | 0.817584 | 3.057039e-52 | -8.615850e-47 |
| Msa0008700 | Msa0880370 | 0.827518 | 1.496998e-54 | -8.615850e-47 |
| Msa0008700 | Msa0895860 | 0.808903 | 2.463927e-50 | -8.615850e-47 |
| Msa0008700 | Msa0898410 | 0.803808 | 2.921048e-49 | -8.615850e-47 |
| Msa0008700 | Msa0898490 | 0.803024 | 4.245649e-49 | -8.615850e-47 |
| Msa0008700 | Msa0899080 | 0.829546 | 4.846463e-55 | -8.615850e-47 |
| Msa0008700 | Msa0906310 | 0.842882 | 1.970646e-58 | -8.615850e-47 |
| Msa0008700 | Msa0911440 | 0.801014 | 1.099633e-48 | -8.615850e-47 |
| Msa0008700 | Msa0927830 | 0.815252 | 1.016760e-51 | -8.615850e-47 |
| Msa0008700 | Msa0927890 | 0.811371 | 7.237966e-51 | -8.615850e-47 |
| Msa0008700 | Msa0928840 | 0.824718 | 6.934200e-54 | -8.615850e-47 |
| Msa0008700 | Msa0932040 | 0.808712 | 2.706662e-50 | -8.615850e-47 |
| Msa0008700 | Msa0938370 | 0.804260 | 2.352330e-49 | -8.615850e-47 |
| Msa0008700 | Msa0941320 | 0.822664 | 2.098896e-53 | -8.615850e-47 |
| Msa0008700 | Msa0961200 | 0.828490 | 8.733004e-55 | -8.615850e-47 |
| Msa0008700 | Msa0967250 | 0.828009 | 1.140960e-54 | -8.615850e-47 |
| Msa0008700 | Msa0967260 | 0.814260 | 1.686432e-51 | -8.615850e-47 |
| Msa0008700 | Msa0970160 | 0.802296 | 6.002284e-49 | -8.615850e-47 |
| Msa0008700 | Msa0975260 | 0.824538 | 7.646041e-54 | -8.615850e-47 |
| Msa0008700 | Msa0975440 | 0.803879 | 2.823459e-49 | -8.615850e-47 |
| Msa0008700 | Msa0975460 | 0.876938 | 9.374728e-69 | -8.615850e-47 |
| Msa0008700 | Msa0978290 | 0.814113 | 1.817629e-51 | -8.615850e-47 |
| Msa0008700 | Msa0995660 | 0.813344 | 2.683707e-51 | -8.615850e-47 |
| Msa0008700 | Msa0998940 | 0.830478 | 2.871449e-55 | -8.615850e-47 |
| Msa0008700 | Msa1015020 | 0.815969 | 7.039635e-52 | -8.615850e-47 |
| Msa0008700 | Msa1016130 | 0.800278 | 1.553583e-48 | -8.615850e-47 |
| Msa0008700 | Msa1017590 | 0.827044 | 1.944110e-54 | -8.615850e-47 |
| Msa0008700 | Msa1017790 | 0.805261 | 1.454160e-49 | -8.615850e-47 |
| Msa0008700 | Msa1019370 | 0.813018 | 3.165673e-51 | -8.615850e-47 |
| Msa0008700 | Msa1020160 | 0.803087 | 4.120618e-49 | -8.615850e-47 |
| Msa0008700 | Msa1022660 | 0.816458 | 5.472611e-52 | -8.615850e-47 |
| Msa0008700 | Msa1028960 | 0.802002 | 6.897009e-49 | -8.615850e-47 |
| Msa0008700 | Msa1030440 | 0.815161 | 1.065476e-51 | -8.615850e-47 |
| Msa0008700 | Msa1033460 | 0.806162 | 9.402433e-50 | -8.615850e-47 |
| Msa0008700 | Msa1039150 | 0.813091 | 3.050121e-51 | -8.615850e-47 |
| Msa0008700 | Msa1040030 | 0.808982 | 2.370129e-50 | -8.615850e-47 |
| Msa0008700 | Msa1056790 | 0.802690 | 4.977726e-49 | -8.615850e-47 |
| Msa0008700 | Msa1061130 | 0.802582 | 5.239041e-49 | -8.615850e-47 |
| Msa0008700 | Msa1068110 | 0.840820 | 6.907717e-58 | -8.615850e-47 |
| Msa0008700 | Msa1070710 | 0.818252 | 2.160042e-52 | -8.615850e-47 |
| Msa0008700 | Msa1070930 | 0.828418 | 9.088682e-55 | -8.615850e-47 |
| Msa0008700 | Msa1071460 | 0.805213 | 1.488109e-49 | -8.615850e-47 |
| Msa0008700 | Msa1083660 | 0.823485 | 1.350518e-53 | -8.615850e-47 |
| Msa0008700 | Msa1093250 | 0.834459 | 2.960248e-56 | -8.615850e-47 |
| Msa0008700 | Msa1106830 | 0.821521 | 3.862746e-53 | -8.615850e-47 |
| Msa0008700 | Msa1113780 | 0.806379 | 8.464482e-50 | -8.615850e-47 |
| Msa0008700 | Msa1127530 | 0.800031 | 1.743990e-48 | -8.615850e-47 |
| Msa0008700 | Msa1140480 | 0.819872 | 9.242677e-53 | -8.615850e-47 |
| Msa0008700 | Msa1147870 | 0.800240 | 1.581094e-48 | -8.615850e-47 |
| Msa0008700 | Msa1148100 | 0.804987 | 1.659161e-49 | -8.615850e-47 |
| Msa0008700 | Msa1150130 | 0.812339 | 4.455382e-51 | -8.615850e-47 |
| Msa0008700 | Msa1158540 | 0.819241 | 1.287847e-52 | -8.615850e-47 |
| Msa0008700 | Msa1160470 | 0.810819 | 9.535663e-51 | -8.615850e-47 |
| Msa0008700 | Msa1161550 | 0.802214 | 6.239386e-49 | -8.615850e-47 |
| Msa0008700 | Msa1182950 | 0.818675 | 1.732057e-52 | -8.615850e-47 |
| Msa0008700 | Msa1186010 | 0.801046 | 1.082974e-48 | -8.615850e-47 |
| Msa0008700 | Msa1190300 | 0.820904 | 5.359919e-53 | -8.615850e-47 |
| Msa0008700 | Msa1190320 | 0.809403 | 1.925161e-50 | -8.615850e-47 |
| Msa0008700 | Msa1198280 | 0.840729 | 7.294599e-58 | -8.615850e-47 |
| Msa0008700 | Msa1199690 | 0.810083 | 1.374924e-50 | -8.615850e-47 |
| Msa0008700 | Msa1202220 | 0.816735 | 4.744263e-52 | -8.615850e-47 |
| Msa0008700 | Msa1203840 | 0.805109 | 1.564060e-49 | -8.615850e-47 |
| Msa0008700 | Msa1203860 | 0.806030 | 1.002475e-49 | -8.615850e-47 |
| Msa0008700 | Msa1204110 | 0.820151 | 7.981095e-53 | -8.615850e-47 |
| Msa0008700 | Msa1206500 | 0.814512 | 1.483661e-51 | -8.615850e-47 |
| Msa0008700 | Msa1209650 | 0.815817 | 7.612019e-52 | -8.615850e-47 |
| Msa0008700 | Msa1220390 | 0.818323 | 2.081110e-52 | -8.615850e-47 |
| Msa0008700 | Msa1223600 | 0.806190 | 9.275821e-50 | -8.615850e-47 |
| Msa0008700 | Msa1229880 | 0.813230 | 2.843240e-51 | -8.615850e-47 |
| Msa0008700 | Msa1240240 | 0.808933 | 2.427100e-50 | -8.615850e-47 |
| Msa0008700 | Msa1251960 | 0.814761 | 1.306528e-51 | -8.615850e-47 |
| Msa0008700 | Msa1263460 | 0.800652 | 1.303518e-48 | -8.615850e-47 |
| Msa0008700 | Msa1265900 | 0.803208 | 3.890725e-49 | -8.615850e-47 |
| Msa0008700 | Msa1267800 | 0.812658 | 3.794195e-51 | -8.615850e-47 |
| Msa0008700 | Msa1270860 | 0.825661 | 4.150122e-54 | -8.615850e-47 |
| Msa0008700 | Msa1277830 | 0.810109 | 1.357520e-50 | -8.615850e-47 |
| Msa0008700 | Msa1277890 | 0.828139 | 1.061378e-54 | -8.615850e-47 |
| Msa0008700 | Msa1277930 | 0.812407 | 4.305563e-51 | -8.615850e-47 |
| Msa0008700 | Msa1279240 | 0.805976 | 1.028905e-49 | -8.615850e-47 |
| Msa0008700 | Msa1279340 | 0.806295 | 8.818314e-50 | -8.615850e-47 |
| Msa0008700 | Msa1283120 | 0.804849 | 1.773203e-49 | -8.615850e-47 |
| Msa0008700 | Msa1286660 | 0.807806 | 4.222542e-50 | -8.615850e-47 |
| Msa0008700 | Msa1288380 | 0.825203 | 5.328390e-54 | -8.615850e-47 |
| Msa0008700 | Msa1296270 | 0.803781 | 2.959676e-49 | -8.615850e-47 |
| Msa0008700 | Msa1297550 | 0.801194 | 1.010371e-48 | -8.615850e-47 |
| Msa0008700 | Msa1303130 | 0.812516 | 4.077016e-51 | -8.615850e-47 |
| Msa0008700 | Msa1308010 | 0.835518 | 1.601468e-56 | -8.615850e-47 |
| Msa0008700 | Msa1310620 | 0.825986 | 3.475898e-54 | -8.615850e-47 |
| Msa0008700 | Msa1330910 | 0.822722 | 2.035015e-53 | -8.615850e-47 |
| Msa0008700 | Msa1331720 | 0.811812 | 5.806890e-51 | -8.615850e-47 |
| Msa0008700 | Msa1335210 | 0.833793 | 4.349270e-56 | -8.615850e-47 |
| Msa0008700 | Msa1343540 | 0.809439 | 1.891287e-50 | -8.615850e-47 |
| Msa0008700 | Msa1346220 | 0.826211 | 3.072962e-54 | -8.615850e-47 |
| Msa0008700 | Msa1346340 | 0.814957 | 1.182595e-51 | -8.615850e-47 |
| Msa0008700 | Msa1350350 | 0.813763 | 2.170909e-51 | -8.615850e-47 |
| Msa0008700 | Msa1356500 | 0.807386 | 5.185319e-50 | -8.615850e-47 |
| Msa0008700 | Msa1360070 | 0.811369 | 7.245198e-51 | -8.615850e-47 |
| Msa0008700 | Msa1364520 | 0.825023 | 5.876263e-54 | -8.615850e-47 |
| Msa0008700 | Msa1364850 | 0.836901 | 7.132880e-57 | -8.615850e-47 |
| Msa0008700 | Msa1369390 | 0.826151 | 3.175043e-54 | -8.615850e-47 |
| Msa0008700 | Msa1370830 | 0.842577 | 2.375135e-58 | -8.615850e-47 |
| Msa0008700 | Msa1376510 | 0.802915 | 4.472552e-49 | -8.615850e-47 |
| Msa0008700 | Msa1379360 | 0.800352 | 1.500398e-48 | -8.615850e-47 |
| Msa0008700 | Msa1381300 | 0.819747 | 9.875116e-53 | -8.615850e-47 |
| Msa0008700 | Msa1381830 | 0.802862 | 4.585705e-49 | -8.615850e-47 |
| Msa0008700 | Msa1386190 | 0.812358 | 4.414654e-51 | -8.615850e-47 |
| Msa0008700 | Msa1387650 | 0.804562 | 2.035733e-49 | -8.615850e-47 |
| Msa0008700 | Msa1388070 | 0.806982 | 6.312473e-50 | -8.615850e-47 |
| Msa0008700 | Msa1388270 | 0.816039 | 6.792548e-52 | -8.615850e-47 |
| Msa0008700 | Msa1393350 | 0.825971 | 3.503681e-54 | -8.615850e-47 |
| Msa0008700 | Msa1403590 | 0.801143 | 1.034635e-48 | -8.615850e-47 |
| Msa0008700 | Msa1405190 | 0.815021 | 1.144414e-51 | -8.615850e-47 |
| Msa0008700 | Msa1413220 | 0.820573 | 6.387064e-53 | -8.615850e-47 |
| Msa0008700 | Msa1414000 | 0.817990 | 2.476102e-52 | -8.615850e-47 |
| Msa0008700 | Msa1420630 | 0.803483 | 3.411266e-49 | -8.615850e-47 |
| Msa0008700 | Msa1425570 | 0.803063 | 4.168848e-49 | -8.615850e-47 |
| Msa0008700 | Msa1430630 | 0.811208 | 7.855053e-51 | -8.615850e-47 |
| Msa0008700 | Msa1435690 | 0.832335 | 1.002446e-55 | -8.615850e-47 |
| Msa0008700 | Msa1439400 | 0.821162 | 4.674100e-53 | -8.615850e-47 |
| Msa0008700 | Msa1443280 | 0.810893 | 9.188969e-51 | -8.615850e-47 |
| Msa0008700 | Msa1448410 | 0.810554 | 1.087782e-50 | -8.615850e-47 |
| Msa0008700 | Msa1449510 | 0.810824 | 9.510546e-51 | -8.615850e-47 |
| Msa0008700 | Msa1455180 | 0.809218 | 2.109822e-50 | -8.615850e-47 |
| Msa0008700 | Msa1462210 | 0.808820 | 2.566473e-50 | -8.615850e-47 |
| Msa0008700 | Msa1466170 | 0.802288 | 6.024159e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0008700 | MtrunA17_Chr1g0146481 | 94.757 | 267 | 9 | 2 | 1 | 267 | 1 | 262 | 2.43e-169 | 483 |
| Msa0008700 | MtrunA17_Chr1g0146551 | 95.000 | 40 | 2 | 0 | 268 | 307 | 512 | 551 | 8.98e-20 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 75 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTCCAGTTTATATGTTGC+AGG | 0.239401 | 1_1:-12559919 | None:intergenic |
| ATCACATTTCGGTTTGTTAA+TGG | 0.244701 | 1_1:+12559178 | Msa0008700:CDS |
| TCATCTTCATCTTCATCTTC+TGG | 0.252075 | 1_1:+12557860 | Msa0008700:CDS |
| TGGAACATAGAATAAAATTA+TGG | 0.257183 | 1_1:+12557733 | Msa0008700:exon |
| AACTTTGCACAACACTTTCA+TGG | 0.296207 | 1_1:+12557713 | Msa0008700:five_prime_UTR |
| CTGTATAGTCATCTACTTTG+TGG | 0.330993 | 1_1:-12559394 | None:intergenic |
| GAAGACTGAAGACTAATGAT+AGG | 0.331144 | 1_1:+12560478 | Msa0008700:intron |
| GCCTTAAAATGAAAGGTGTT+TGG | 0.342799 | 1_1:+12560529 | Msa0008700:CDS |
| TTTCCTTTCTCTTGCTAGAA+TGG | 0.344400 | 1_1:-12559430 | None:intergenic |
| AAAATTATGGGTCTCTGCTT+TGG | 0.357478 | 1_1:+12557746 | Msa0008700:exon |
| TGAAAGTGTTGTGCAAAGTT+TGG | 0.366162 | 1_1:-12557710 | None:intergenic |
| GAAAGTGTTGTGCAAAGTTT+GGG | 0.373824 | 1_1:-12557709 | None:intergenic |
| AAGGAGAAGAGTGGTGAAGA+GGG | 0.387482 | 1_1:-12557805 | None:intergenic |
| AAAGCAATTGCTATGTGATC+AGG | 0.401348 | 1_1:+12559895 | Msa0008700:CDS |
| GTTTGTCTAACAACATCTTT+CGG | 0.411275 | 1_1:+12559308 | Msa0008700:CDS |
| ATAAACTGGAGCAAGGGTTA+TGG | 0.416768 | 1_1:+12559929 | Msa0008700:CDS |
| GTTCATTATTTCAGGAAAGT+TGG | 0.420315 | 1_1:+12559855 | Msa0008700:intron |
| GGAACATAGAATAAAATTAT+GGG | 0.424788 | 1_1:+12557734 | Msa0008700:exon |
| AGGGCCTGCAACATATAAAC+TGG | 0.424849 | 1_1:+12559915 | Msa0008700:CDS |
| CCGAAATGTGATTCCTCAAA+AGG | 0.428593 | 1_1:-12559167 | None:intergenic |
| ATCATCAGCATTGGAGGCTC+CGG | 0.440166 | 1_1:+12558829 | Msa0008700:CDS |
| TCTTCTTGATTATCGTCTAA+AGG | 0.440788 | 1_1:-12559506 | None:intergenic |
| TTTGCTTTCAACAATTTATG+AGG | 0.443404 | 1_1:+12558760 | Msa0008700:CDS |
| AGCATTGGAGGCTCCGGAAA+AGG | 0.460390 | 1_1:+12558835 | Msa0008700:CDS |
| TGAAGATGAAGATGAAGAAG+AGG | 0.464142 | 1_1:-12557852 | None:intergenic |
| GCTTTCAACAAAACCTCTCT+TGG | 0.466382 | 1_1:-12560508 | None:intergenic |
| TGTCCATTCTAGCAAGAGAA+AGG | 0.469422 | 1_1:+12559427 | Msa0008700:CDS |
| GAAAATAGAAGAAGAAAGAG+AGG | 0.479685 | 1_1:+12559449 | Msa0008700:CDS |
| TTCAGGTAAATAAAGGAAAG+AGG | 0.481787 | 1_1:+12559102 | Msa0008700:intron |
| AATGTGACGTAGCTGGAGGC+AGG | 0.486847 | 1_1:+12558708 | Msa0008700:intron |
| AAAGGAGAAGAGTGGTGAAG+AGG | 0.495785 | 1_1:-12557806 | None:intergenic |
| AAGAGCGGTGATTGCTCAAA+GGG | 0.498014 | 1_1:+12559586 | Msa0008700:CDS |
| GTTGAAAGCCTTAAAATGAA+AGG | 0.499729 | 1_1:+12560522 | Msa0008700:CDS |
| GCTCAATTGCAGACTGATGC+AGG | 0.514358 | 1_1:-12560614 | None:intergenic |
| CTTTCAACAATTTATGAGGA+AGG | 0.515733 | 1_1:+12558764 | Msa0008700:CDS |
| ATATGTGAATGAGTGAAGAA+AGG | 0.520286 | 1_1:-12557824 | None:intergenic |
| TTGCAAGGGAGATGAAGAAC+TGG | 0.521191 | 1_1:+12557623 | None:intergenic |
| AGATCCATTACGTTCTTCAC+CGG | 0.526005 | 1_1:+12559526 | Msa0008700:CDS |
| GGATCGAGAGGAAGGTGCTA+TGG | 0.531414 | 1_1:-12559480 | None:intergenic |
| CACAAAGTAGATGACTATAC+AGG | 0.532204 | 1_1:+12559395 | Msa0008700:CDS |
| GAAAGCAAAGACAACCTCAC+AGG | 0.556099 | 1_1:-12558746 | None:intergenic |
| TGCGGTCACATCGTGTGATG+TGG | 0.558617 | 1_1:-12560565 | None:intergenic |
| CCGGAAAAGGATTTATTGCA+AGG | 0.561432 | 1_1:+12558848 | Msa0008700:CDS |
| GAGTGAAGAAAGGAGAAGAG+TGG | 0.563755 | 1_1:-12557814 | None:intergenic |
| TTGATTATCGTCTAAAGGCA+AGG | 0.567819 | 1_1:-12559501 | None:intergenic |
| ACGATGTGACCGCAAAATTG+AGG | 0.570621 | 1_1:+12560574 | Msa0008700:CDS |
| CAACTTCAGAAAATCACTCC+AGG | 0.571349 | 1_1:+12559966 | Msa0008700:CDS |
| AAAGAGCGGTGATTGCTCAA+AGG | 0.572707 | 1_1:+12559585 | Msa0008700:CDS |
| AAGACTGAAGACTAATGATA+GGG | 0.572820 | 1_1:+12560479 | Msa0008700:CDS |
| ATCGTGTGATGTGGACCGCA+AGG | 0.573818 | 1_1:-12560556 | None:intergenic |
| TGATTCGGAAGCATTGAGGT+TGG | 0.577266 | 1_1:+12559232 | Msa0008700:CDS |
| ATAATGCAACTAGAAAAGCT+TGG | 0.577465 | 1_1:+12559266 | Msa0008700:CDS |
| TTGCTGATTCGGAAGCATTG+AGG | 0.585058 | 1_1:+12559228 | Msa0008700:CDS |
| AAGCAATTGCTATGTGATCA+GGG | 0.587277 | 1_1:+12559896 | Msa0008700:CDS |
| AAAGGCAAGGATCGAGAGGA+AGG | 0.595520 | 1_1:-12559488 | None:intergenic |
| GCAACATATAAACTGGAGCA+AGG | 0.598738 | 1_1:+12559922 | Msa0008700:CDS |
| GTTGTGCAAAGTTTGGGGAA+AGG | 0.602440 | 1_1:-12557703 | None:intergenic |
| GTCTAAAGGCAAGGATCGAG+AGG | 0.607879 | 1_1:-12559492 | None:intergenic |
| GGGAGATGAAGAACTGGTGG+TGG | 0.613888 | 1_1:+12557629 | None:intergenic |
| ATGTGACGTAGCTGGAGGCA+GGG | 0.615472 | 1_1:+12558709 | Msa0008700:intron |
| CAACATATAAACTGGAGCAA+GGG | 0.628915 | 1_1:+12559923 | Msa0008700:CDS |
| GAAGCCGGTGAAGAACGTAA+TGG | 0.630391 | 1_1:-12559530 | None:intergenic |
| AAAGCAAAGACAACCTCACA+GGG | 0.634488 | 1_1:-12558745 | None:intergenic |
| GGTTTGTTAATGGAGAACCT+TGG | 0.645273 | 1_1:+12559188 | Msa0008700:CDS |
| AAACTTTATTCAACCCTGTG+AGG | 0.647408 | 1_1:+12558732 | Msa0008700:CDS |
| GATAGGGAGAGTGCCAAGAG+AGG | 0.651200 | 1_1:+12560495 | Msa0008700:CDS |
| AGCGGTGATTGCTCAAAGGG+AGG | 0.670598 | 1_1:+12559589 | Msa0008700:CDS |
| GCAAGGAGGAGAACTAACAA+AGG | 0.676146 | 1_1:+12558865 | Msa0008700:CDS |
| AAGTTTCTTCTAAAACACCA+AGG | 0.678399 | 1_1:-12559205 | None:intergenic |
| GAAAAGGATTTATTGCAAGG+AGG | 0.683567 | 1_1:+12558851 | Msa0008700:CDS |
| CAAGGGAGATGAAGAACTGG+TGG | 0.702546 | 1_1:+12557626 | None:intergenic |
| TGATGCAGGTGCAGACACTG+CGG | 0.724877 | 1_1:-12560600 | None:intergenic |
| AGTGCAGTTCGATATGCATG+AGG | 0.733742 | 1_1:-12559333 | None:intergenic |
| AAGGTGTTTGGATTGCCTTG+CGG | 0.734472 | 1_1:+12560541 | Msa0008700:CDS |
| AAAGTGTTGTGCAAAGTTTG+GGG | 0.737918 | 1_1:-12557708 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATTAGCAAAATAAAAT+AGG | - | chr1_1:12557937-12557956 | None:intergenic | 10.0% |
| !!! | ATATATATTTTCGTATATTA+AGG | - | chr1_1:12558528-12558547 | None:intergenic | 10.0% |
| !!! | TATTCATTCTTCTAAAAATA+AGG | - | chr1_1:12559025-12559044 | None:intergenic | 15.0% |
| !! | TTTATGTTAATAGCTAAAAT+TGG | + | chr1_1:12559053-12559072 | Msa0008700:intron | 15.0% |
| !! | TTATGTTAATAGCTAAAATT+GGG | + | chr1_1:12559054-12559073 | Msa0008700:intron | 15.0% |
| !!! | CTTTAAAATATTTGTTTTTC+AGG | + | chr1_1:12559085-12559104 | Msa0008700:intron | 15.0% |
| !! | AAATACTAAAAATAAAAGAG+CGG | + | chr1_1:12559571-12559590 | Msa0008700:CDS | 15.0% |
| !! | ATAATATGTATTCTTACATT+AGG | - | chr1_1:12560006-12560025 | None:intergenic | 15.0% |
| !!! | TATTATTGATTTTATGATGT+TGG | + | chr1_1:12560020-12560039 | Msa0008700:intron | 15.0% |
| !!! | TGATAGTACTTATATTTTAA+AGG | + | chr1_1:12560213-12560232 | Msa0008700:intron | 15.0% |
| !!! | GATAGTACTTATATTTTAAA+GGG | + | chr1_1:12560214-12560233 | Msa0008700:intron | 15.0% |
| !! | TGTTGTTACATAAAAAGTTA+AGG | - | chr1_1:12557677-12557696 | None:intergenic | 20.0% |
| !! | TGGAACATAGAATAAAATTA+TGG | + | chr1_1:12557733-12557752 | Msa0008700:exon | 20.0% |
| !! | GGAACATAGAATAAAATTAT+GGG | + | chr1_1:12557734-12557753 | Msa0008700:exon | 20.0% |
| !! | AATATCATTACTCTAAGTAA+AGG | - | chr1_1:12557971-12557990 | None:intergenic | 20.0% |
| !! | TATATCATACAATTGATTGT+CGG | - | chr1_1:12558071-12558090 | None:intergenic | 20.0% |
| !! | TTACACTAATTCAATCATAA+TGG | - | chr1_1:12558300-12558319 | None:intergenic | 20.0% |
| !! | ATAAACTTATGAACTTAACA+GGG | - | chr1_1:12558333-12558352 | None:intergenic | 20.0% |
| !! | TATAAACTTATGAACTTAAC+AGG | - | chr1_1:12558334-12558353 | None:intergenic | 20.0% |
| !!! | AAACTCGAAAATTTTAACTA+TGG | - | chr1_1:12558608-12558627 | None:intergenic | 20.0% |
| !!! | TTTTTTTCACTCTGAATTTT+GGG | + | chr1_1:12558681-12558700 | Msa0008700:intron | 20.0% |
| !! | TATGTTAATAGCTAAAATTG+GGG | + | chr1_1:12559055-12559074 | Msa0008700:intron | 20.0% |
| !!! | TTTGTTTTTCAGGTAAATAA+AGG | + | chr1_1:12559095-12559114 | Msa0008700:intron | 20.0% |
| !! | AGATTTAGAAAAAAGAGAAA+GGG | - | chr1_1:12559824-12559843 | None:intergenic | 20.0% |
| !! | TATGTAACTGTTCTAATTAT+AGG | - | chr1_1:12560068-12560087 | None:intergenic | 20.0% |
| !!! | GATTGGTTAAAATAAATTTC+AGG | - | chr1_1:12560310-12560329 | None:intergenic | 20.0% |
| !!! | TATACTAAATTTTGATGCAC+TGG | + | chr1_1:12558035-12558054 | Msa0008700:intron | 25.0% |
| !!! | GAGTACAATTATTTTACACA+TGG | - | chr1_1:12558220-12558239 | None:intergenic | 25.0% |
| ! | GTAAAATAATTGTACTCTGA+CGG | + | chr1_1:12558223-12558242 | Msa0008700:intron | 25.0% |
| ! | TAAAATAATTGTACTCTGAC+GGG | + | chr1_1:12558224-12558243 | Msa0008700:intron | 25.0% |
| ! | TTTGGATCACTAAATATATC+TGG | - | chr1_1:12558272-12558291 | None:intergenic | 25.0% |
| ! | ACTAATTCAATCATAATGGT+TGG | - | chr1_1:12558296-12558315 | None:intergenic | 25.0% |
| !! | TTTTCGTATATTAAGGTTCT+GGG | - | chr1_1:12558521-12558540 | None:intergenic | 25.0% |
| !! | ATTTTCGTATATTAAGGTTC+TGG | - | chr1_1:12558522-12558541 | None:intergenic | 25.0% |
| !!! | CTTTTTTTCACTCTGAATTT+TGG | + | chr1_1:12558680-12558699 | Msa0008700:intron | 25.0% |
| ! | TTTGCTTTCAACAATTTATG+AGG | + | chr1_1:12558760-12558779 | Msa0008700:CDS | 25.0% |
| ! | CATAATTGTATACAAAGCAA+AGG | - | chr1_1:12558904-12558923 | None:intergenic | 25.0% |
| ! | CTTTGCTTTGTATACAATTA+TGG | + | chr1_1:12558902-12558921 | Msa0008700:intron | 25.0% |
| ! | ATGTTAATAGCTAAAATTGG+GGG | + | chr1_1:12559056-12559075 | Msa0008700:intron | 25.0% |
| ! | CAGATTTAGAAAAAAGAGAA+AGG | - | chr1_1:12559825-12559844 | None:intergenic | 25.0% |
| !!! | CTTTCTCTTTTTTCTAAATC+TGG | + | chr1_1:12559823-12559842 | Msa0008700:intron | 25.0% |
| ! | CTTGTATTGTTCATTATTTC+AGG | + | chr1_1:12559847-12559866 | Msa0008700:intron | 25.0% |
| ! | AAAGCTGTTTAATTCTTAGA+TGG | + | chr1_1:12560157-12560176 | Msa0008700:intron | 25.0% |
| ! | TTAAAGGGATAAGAAGAAAA+TGG | + | chr1_1:12560229-12560248 | Msa0008700:intron | 25.0% |
| ! | TAAAGGGATAAGAAGAAAAT+GGG | + | chr1_1:12560230-12560249 | Msa0008700:intron | 25.0% |
| !! | ATTTTCATCACTTAATGTGA+CGG | - | chr1_1:12560368-12560387 | None:intergenic | 25.0% |
| ! | GATGAAAATATGTATCCTTT+AGG | + | chr1_1:12560379-12560398 | Msa0008700:intron | 25.0% |
| ATATGTGAATGAGTGAAGAA+AGG | - | chr1_1:12557827-12557846 | None:intergenic | 30.0% | |
| TCATTACTCTAAGTAAAGGA+GGG | - | chr1_1:12557967-12557986 | None:intergenic | 30.0% | |
| ATCATTACTCTAAGTAAAGG+AGG | - | chr1_1:12557968-12557987 | None:intergenic | 30.0% | |
| AAAATAATTGTACTCTGACG+GGG | + | chr1_1:12558225-12558244 | Msa0008700:intron | 30.0% | |
| TCAATCATAATGGTTGGATT+TGG | - | chr1_1:12558290-12558309 | None:intergenic | 30.0% | |
| TGGTCAAAGATTGTTAGTAA+GGG | - | chr1_1:12558451-12558470 | None:intergenic | 30.0% | |
| TTGGTCAAAGATTGTTAGTA+AGG | - | chr1_1:12558452-12558471 | None:intergenic | 30.0% | |
| TTTCGTATATTAAGGTTCTG+GGG | - | chr1_1:12558520-12558539 | None:intergenic | 30.0% | |
| CTTTCAACAATTTATGAGGA+AGG | + | chr1_1:12558764-12558783 | Msa0008700:CDS | 30.0% | |
| TTCAGGTAAATAAAGGAAAG+AGG | + | chr1_1:12559102-12559121 | Msa0008700:intron | 30.0% | |
| !! | ATCACATTTCGGTTTGTTAA+TGG | + | chr1_1:12559178-12559197 | Msa0008700:CDS | 30.0% |
| !! | AAGTTTCTTCTAAAACACCA+AGG | - | chr1_1:12559208-12559227 | None:intergenic | 30.0% |
| !! | AGAAGAAACTTTTGCTGATT+CGG | + | chr1_1:12559217-12559236 | Msa0008700:CDS | 30.0% |
| ATAATGCAACTAGAAAAGCT+TGG | + | chr1_1:12559266-12559285 | Msa0008700:CDS | 30.0% | |
| GTTTGTCTAACAACATCTTT+CGG | + | chr1_1:12559308-12559327 | Msa0008700:CDS | 30.0% | |
| GAAAATAGAAGAAGAAAGAG+AGG | + | chr1_1:12559449-12559468 | Msa0008700:CDS | 30.0% | |
| TCTTCTTGATTATCGTCTAA+AGG | - | chr1_1:12559509-12559528 | None:intergenic | 30.0% | |
| GTTCATTATTTCAGGAAAGT+TGG | + | chr1_1:12559855-12559874 | Msa0008700:intron | 30.0% | |
| TAGGCAAGTAAAAATTTACC+TGG | - | chr1_1:12559987-12560006 | None:intergenic | 30.0% | |
| AAGTGATAGAGCAATATTGA+AGG | + | chr1_1:12560417-12560436 | Msa0008700:intron | 30.0% | |
| AGTGATAGAGCAATATTGAA+GGG | + | chr1_1:12560418-12560437 | Msa0008700:intron | 30.0% | |
| AAGACTGAAGACTAATGATA+GGG | + | chr1_1:12560479-12560498 | Msa0008700:CDS | 30.0% | |
| GTTGAAAGCCTTAAAATGAA+AGG | + | chr1_1:12560522-12560541 | Msa0008700:CDS | 30.0% | |
| ! | TCCAAACACCTTTCATTTTA+AGG | - | chr1_1:12560533-12560552 | None:intergenic | 30.0% |
| !! | AAAGTGTTGTGCAAAGTTTG+GGG | - | chr1_1:12557711-12557730 | None:intergenic | 35.0% |
| !! | GAAAGTGTTGTGCAAAGTTT+GGG | - | chr1_1:12557712-12557731 | None:intergenic | 35.0% |
| !! | TGAAAGTGTTGTGCAAAGTT+TGG | - | chr1_1:12557713-12557732 | None:intergenic | 35.0% |
| AACTTTGCACAACACTTTCA+TGG | + | chr1_1:12557713-12557732 | Msa0008700:five_prime_UTR | 35.0% | |
| AAAATTATGGGTCTCTGCTT+TGG | + | chr1_1:12557746-12557765 | Msa0008700:exon | 35.0% | |
| TGAAGATGAAGATGAAGAAG+AGG | - | chr1_1:12557855-12557874 | None:intergenic | 35.0% | |
| TCATCTTCATCTTCATCTTC+TGG | + | chr1_1:12557860-12557879 | Msa0008700:CDS | 35.0% | |
| ATACAATTGATTGTCGGTGA+TGG | - | chr1_1:12558065-12558084 | None:intergenic | 35.0% | |
| ATTAGTATGCTATGTCAGTC+AGG | + | chr1_1:12558099-12558118 | Msa0008700:intron | 35.0% | |
| TTAGTATGCTATGTCAGTCA+GGG | + | chr1_1:12558100-12558119 | Msa0008700:intron | 35.0% | |
| GTTTGGAGGTAAGTAAAGTT+TGG | - | chr1_1:12558471-12558490 | None:intergenic | 35.0% | |
| ! | TTCGTATATTAAGGTTCTGG+GGG | - | chr1_1:12558519-12558538 | None:intergenic | 35.0% |
| TGTGATTTCCAGTTAGAAGA+AGG | + | chr1_1:12558579-12558598 | Msa0008700:intron | 35.0% | |
| TATGGTATCCTTCTTCTAAC+TGG | - | chr1_1:12558590-12558609 | None:intergenic | 35.0% | |
| AAACTTTATTCAACCCTGTG+AGG | + | chr1_1:12558732-12558751 | Msa0008700:CDS | 35.0% | |
| ! | TGCATTTTCATCATCAGCAT+TGG | + | chr1_1:12558820-12558839 | Msa0008700:CDS | 35.0% |
| !! | ATTTTCATCATCAGCATTGG+AGG | + | chr1_1:12558823-12558842 | Msa0008700:CDS | 35.0% |
| ! | CCTTGCAATAAATCCTTTTC+CGG | - | chr1_1:12558851-12558870 | None:intergenic | 35.0% |
| GAAAAGGATTTATTGCAAGG+AGG | + | chr1_1:12558851-12558870 | Msa0008700:CDS | 35.0% | |
| !! | CCTTTTGAGGAATCACATTT+CGG | + | chr1_1:12559167-12559186 | Msa0008700:CDS | 35.0% |
| CTGTATAGTCATCTACTTTG+TGG | - | chr1_1:12559397-12559416 | None:intergenic | 35.0% | |
| CACAAAGTAGATGACTATAC+AGG | + | chr1_1:12559395-12559414 | Msa0008700:CDS | 35.0% | |
| TTTCCTTTCTCTTGCTAGAA+TGG | - | chr1_1:12559433-12559452 | None:intergenic | 35.0% | |
| TTGATTATCGTCTAAAGGCA+AGG | - | chr1_1:12559504-12559523 | None:intergenic | 35.0% | |
| !! | NNNNATACTAGAGGTGTCCA+TGG | + | chr1_1:12559713-12559732 | Msa0008700:intron | 35.0% |
| CTAGGTATTCAATTTCACCA+TGG | - | chr1_1:12559733-12559752 | None:intergenic | 35.0% | |
| CATGGTGAAATTGAATACCT+AGG | + | chr1_1:12559731-12559750 | Msa0008700:intron | 35.0% | |
| !! | TAGGAAAGTACCAAGTTACT+CGG | + | chr1_1:12559750-12559769 | Msa0008700:intron | 35.0% |
| ACAATTACCATGAACGTAGT+TGG | + | chr1_1:12559796-12559815 | Msa0008700:intron | 35.0% | |
| AAAGCAATTGCTATGTGATC+AGG | + | chr1_1:12559895-12559914 | Msa0008700:CDS | 35.0% | |
| AAGCAATTGCTATGTGATCA+GGG | + | chr1_1:12559896-12559915 | Msa0008700:CDS | 35.0% | |
| CAACATATAAACTGGAGCAA+GGG | + | chr1_1:12559923-12559942 | Msa0008700:CDS | 35.0% | |
| !!! | TTTTCTGAAGTTGCAAACTG+TGG | - | chr1_1:12559959-12559978 | None:intergenic | 35.0% |
| ! | TTTTATGATGTTGGCACTGT+TGG | + | chr1_1:12560029-12560048 | Msa0008700:intron | 35.0% |
| TTTATGATGTTGGCACTGTT+GGG | + | chr1_1:12560030-12560049 | Msa0008700:intron | 35.0% | |
| AGTACTTAGCAGGTCTTAAA+TGG | + | chr1_1:12560253-12560272 | Msa0008700:intron | 35.0% | |
| ACCAATCAATCCAATGTTAG+AGG | + | chr1_1:12560323-12560342 | Msa0008700:intron | 35.0% | |
| CCAATCAATCCAATGTTAGA+GGG | + | chr1_1:12560324-12560343 | Msa0008700:intron | 35.0% | |
| !! | CTCTAAAATCCCTCTAACAT+TGG | - | chr1_1:12560336-12560355 | None:intergenic | 35.0% |
| GAAGACTGAAGACTAATGAT+AGG | + | chr1_1:12560478-12560497 | Msa0008700:intron | 35.0% | |
| !! | GCCTTAAAATGAAAGGTGTT+TGG | + | chr1_1:12560529-12560548 | Msa0008700:CDS | 35.0% |
| TACTCTAAGTAAAGGAGGGA+AGG | - | chr1_1:12557963-12557982 | None:intergenic | 40.0% | |
| TGTTAGTAAGGGTTCGAACT+CGG | - | chr1_1:12558440-12558459 | None:intergenic | 40.0% | |
| !! | TATTAAGGTTCTGGGGGAAT+CGG | - | chr1_1:12558513-12558532 | None:intergenic | 40.0% |
| TTTAAATGTGACGTAGCTGG+AGG | + | chr1_1:12558704-12558723 | Msa0008700:intron | 40.0% | |
| AAAGCAAAGACAACCTCACA+GGG | - | chr1_1:12558748-12558767 | None:intergenic | 40.0% | |
| CCGGAAAAGGATTTATTGCA+AGG | + | chr1_1:12558848-12558867 | Msa0008700:CDS | 40.0% | |
| AGAATCGCTGTCAAAATCAG+TGG | + | chr1_1:12558964-12558983 | Msa0008700:intron | 40.0% | |
| ! | TAACACGCAGTTACCTTTTG+AGG | + | chr1_1:12559154-12559173 | Msa0008700:CDS | 40.0% |
| CCGAAATGTGATTCCTCAAA+AGG | - | chr1_1:12559170-12559189 | None:intergenic | 40.0% | |
| !! | GGTTTGTTAATGGAGAACCT+TGG | + | chr1_1:12559188-12559207 | Msa0008700:CDS | 40.0% |
| TGTCCATTCTAGCAAGAGAA+AGG | + | chr1_1:12559427-12559446 | Msa0008700:CDS | 40.0% | |
| AGATCCATTACGTTCTTCAC+CGG | + | chr1_1:12559526-12559545 | Msa0008700:CDS | 40.0% | |
| ! | GCTCTTTTTGCAAAAGAAGC+CGG | - | chr1_1:12559548-12559567 | None:intergenic | 40.0% |
| GAGTAACTTGGTACTTTCCT+AGG | - | chr1_1:12559751-12559770 | None:intergenic | 40.0% | |
| CTGTAATAAGCCGAGTAACT+TGG | - | chr1_1:12559763-12559782 | None:intergenic | 40.0% | |
| TGCTCCAGTTTATATGTTGC+AGG | - | chr1_1:12559922-12559941 | None:intergenic | 40.0% | |
| GCAACATATAAACTGGAGCA+AGG | + | chr1_1:12559922-12559941 | Msa0008700:CDS | 40.0% | |
| ATAAACTGGAGCAAGGGTTA+TGG | + | chr1_1:12559929-12559948 | Msa0008700:CDS | 40.0% | |
| CAACTTCAGAAAATCACTCC+AGG | + | chr1_1:12559966-12559985 | Msa0008700:CDS | 40.0% | |
| !! | AGAAAATGGGAGTACTTAGC+AGG | + | chr1_1:12560243-12560262 | Msa0008700:intron | 40.0% |
| CCCTCTAACATTGGATTGAT+TGG | - | chr1_1:12560327-12560346 | None:intergenic | 40.0% | |
| GTCTAAGTTCACAGACCTAA+AGG | - | chr1_1:12560397-12560416 | None:intergenic | 40.0% | |
| GCTTTCAACAAAACCTCTCT+TGG | - | chr1_1:12560511-12560530 | None:intergenic | 40.0% | |
| GTTGTGCAAAGTTTGGGGAA+AGG | - | chr1_1:12557706-12557725 | None:intergenic | 45.0% | |
| AAGGAGAAGAGTGGTGAAGA+GGG | - | chr1_1:12557808-12557827 | None:intergenic | 45.0% | |
| AAAGGAGAAGAGTGGTGAAG+AGG | - | chr1_1:12557809-12557828 | None:intergenic | 45.0% | |
| GAGTGAAGAAAGGAGAAGAG+TGG | - | chr1_1:12557817-12557836 | None:intergenic | 45.0% | |
| ACTGATCACGTCTAAACGCA+CGG | + | chr1_1:12558145-12558164 | Msa0008700:intron | 45.0% | |
| TAATTGTACTCTGACGGGGA+CGG | + | chr1_1:12558229-12558248 | Msa0008700:intron | 45.0% | |
| CTTACCTCCAAACTGAACTC+CGG | + | chr1_1:12558478-12558497 | Msa0008700:intron | 45.0% | |
| TGACAATCCGGAGTTCAGTT+TGG | - | chr1_1:12558488-12558507 | None:intergenic | 45.0% | |
| TAGTGTGTGTGTGTGTGTCT+TGG | + | chr1_1:12558554-12558573 | Msa0008700:intron | 45.0% | |
| GGGTTTAAATGTGACGTAGC+TGG | + | chr1_1:12558701-12558720 | Msa0008700:intron | 45.0% | |
| GAAAGCAAAGACAACCTCAC+AGG | - | chr1_1:12558749-12558768 | None:intergenic | 45.0% | |
| GCAAGGAGGAGAACTAACAA+AGG | + | chr1_1:12558865-12558884 | Msa0008700:CDS | 45.0% | |
| !! | TTGCTGATTCGGAAGCATTG+AGG | + | chr1_1:12559228-12559247 | Msa0008700:CDS | 45.0% |
| !! | TGATTCGGAAGCATTGAGGT+TGG | + | chr1_1:12559232-12559251 | Msa0008700:CDS | 45.0% |
| AGTGCAGTTCGATATGCATG+AGG | - | chr1_1:12559336-12559355 | None:intergenic | 45.0% | |
| AAAGAGCGGTGATTGCTCAA+AGG | + | chr1_1:12559585-12559604 | Msa0008700:CDS | 45.0% | |
| AAGAGCGGTGATTGCTCAAA+GGG | + | chr1_1:12559586-12559605 | Msa0008700:CDS | 45.0% | |
| AGGGCCTGCAACATATAAAC+TGG | + | chr1_1:12559915-12559934 | Msa0008700:CDS | 45.0% | |
| ! | AAGGTGTTTGGATTGCCTTG+CGG | + | chr1_1:12560541-12560560 | Msa0008700:CDS | 45.0% |
| ACGATGTGACCGCAAAATTG+AGG | + | chr1_1:12560574-12560593 | Msa0008700:CDS | 45.0% | |
| !! | TTAATTAATATAATACAAAA+AGG | - | chr1_1:12557900-12557919 | None:intergenic | 5.0% |
| GTGCGTTTAGACGTGATCAG+TGG | - | chr1_1:12558146-12558165 | None:intergenic | 50.0% | |
| CTGATCACGTCTAAACGCAC+GGG | + | chr1_1:12558146-12558165 | Msa0008700:intron | 50.0% | |
| AATTGTACTCTGACGGGGAC+GGG | + | chr1_1:12558230-12558249 | Msa0008700:intron | 50.0% | |
| CAATCCGGAGTTCAGTTTGG+AGG | - | chr1_1:12558485-12558504 | None:intergenic | 50.0% | |
| !! | GGGGAATCGGTTTGACAATC+CGG | - | chr1_1:12558500-12558519 | None:intergenic | 50.0% |
| ! | ATCATCAGCATTGGAGGCTC+CGG | + | chr1_1:12558829-12558848 | Msa0008700:CDS | 50.0% |
| AAAGGCAAGGATCGAGAGGA+AGG | - | chr1_1:12559491-12559510 | None:intergenic | 50.0% | |
| GTCTAAAGGCAAGGATCGAG+AGG | - | chr1_1:12559495-12559514 | None:intergenic | 50.0% | |
| GAAGCCGGTGAAGAACGTAA+TGG | - | chr1_1:12559533-12559552 | None:intergenic | 50.0% | |
| !! | AAGGGCACCAACTACGTTCA+TGG | - | chr1_1:12559806-12559825 | None:intergenic | 50.0% |
| ! | CTGCGGCAACCTCAATTTTG+CGG | - | chr1_1:12560586-12560605 | None:intergenic | 50.0% |
| GCTCAATTGCAGACTGATGC+AGG | - | chr1_1:12560617-12560636 | None:intergenic | 50.0% | |
| ATTGTACTCTGACGGGGACG+GGG | + | chr1_1:12558231-12558250 | Msa0008700:intron | 55.0% | |
| AATGTGACGTAGCTGGAGGC+AGG | + | chr1_1:12558708-12558727 | Msa0008700:intron | 55.0% | |
| ATGTGACGTAGCTGGAGGCA+GGG | + | chr1_1:12558709-12558728 | Msa0008700:intron | 55.0% | |
| ! | AGCATTGGAGGCTCCGGAAA+AGG | + | chr1_1:12558835-12558854 | Msa0008700:CDS | 55.0% |
| !! | GGATCGAGAGGAAGGTGCTA+TGG | - | chr1_1:12559483-12559502 | None:intergenic | 55.0% |
| AGCGGTGATTGCTCAAAGGG+AGG | + | chr1_1:12559589-12559608 | Msa0008700:CDS | 55.0% | |
| GGTGATTGCTCAAAGGGAGG+TGG | + | chr1_1:12559592-12559611 | Msa0008700:intron | 55.0% | |
| !! | GATAGGGAGAGTGCCAAGAG+AGG | + | chr1_1:12560495-12560514 | Msa0008700:CDS | 55.0% |
| ATCGTGTGATGTGGACCGCA+AGG | - | chr1_1:12560559-12560578 | None:intergenic | 55.0% | |
| TGCGGTCACATCGTGTGATG+TGG | - | chr1_1:12560568-12560587 | None:intergenic | 55.0% | |
| TGATGCAGGTGCAGACACTG+CGG | - | chr1_1:12560603-12560622 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 12557636 | 12560641 | 12557636 | ID=Msa0008700;Name=Msa0008700 |
| chr1_1 | mRNA | 12557636 | 12560641 | 12557636 | ID=Msa0008700-mRNA-1;Parent=Msa0008700;Name=Msa0008700-mRNA-1;_AED=0.23;_eAED=0.23;_QI=116|0.5|0.6|0.8|1|1|5|0|360 |
| chr1_1 | exon | 12557636 | 12557881 | 12557636 | ID=Msa0008700-mRNA-1:exon:4744;Parent=Msa0008700-mRNA-1 |
| chr1_1 | exon | 12558720 | 12558886 | 12558720 | ID=Msa0008700-mRNA-1:exon:4745;Parent=Msa0008700-mRNA-1 |
| chr1_1 | exon | 12559107 | 12559610 | 12559107 | ID=Msa0008700-mRNA-1:exon:4746;Parent=Msa0008700-mRNA-1 |
| chr1_1 | exon | 12559869 | 12559987 | 12559869 | ID=Msa0008700-mRNA-1:exon:4747;Parent=Msa0008700-mRNA-1 |
| chr1_1 | exon | 12560479 | 12560641 | 12560479 | ID=Msa0008700-mRNA-1:exon:4748;Parent=Msa0008700-mRNA-1 |
| chr1_1 | five_prime_UTR | 12557636 | 12557751 | 12557636 | ID=Msa0008700-mRNA-1:five_prime_utr;Parent=Msa0008700-mRNA-1 |
| chr1_1 | CDS | 12557752 | 12557881 | 12557752 | ID=Msa0008700-mRNA-1:cds;Parent=Msa0008700-mRNA-1 |
| chr1_1 | CDS | 12558720 | 12558886 | 12558720 | ID=Msa0008700-mRNA-1:cds;Parent=Msa0008700-mRNA-1 |
| chr1_1 | CDS | 12559107 | 12559610 | 12559107 | ID=Msa0008700-mRNA-1:cds;Parent=Msa0008700-mRNA-1 |
| chr1_1 | CDS | 12559869 | 12559987 | 12559869 | ID=Msa0008700-mRNA-1:cds;Parent=Msa0008700-mRNA-1 |
| chr1_1 | CDS | 12560479 | 12560641 | 12560479 | ID=Msa0008700-mRNA-1:cds;Parent=Msa0008700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
