AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1302640


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1302640 MtrunA17_Chr4g0075581 97.089 481 14 0 2 482 1 481 0.0 956
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1302640 AT4G14590.1 55.932 472 182 3 12 482 16 462 7.30e-180 514

Find 166 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGTGAAACATCAACTTATT+TGG 0.070670 8_3:-65222232 Msa1302640:CDS
CGCAACTGTGTCTCCATTTC+TGG 0.098968 8_3:+65221720 None:intergenic
TGTAAACCTTCTGGGAAATT+TGG 0.134778 8_3:-65219303 Msa1302640:three_prime_UTR
TTTCATTTATGTTTGAAAAT+TGG 0.160887 8_3:-65221912 Msa1302640:CDS
TTTGCTTACTCATGTGAAAT+TGG 0.188512 8_3:-65221694 Msa1302640:CDS
ATTTCAGTGATGATAATTTA+TGG 0.209364 8_3:-65222127 Msa1302640:CDS
TTAAGGAGAATGGTGGTTTA+AGG 0.243297 8_3:+65222438 None:intergenic
GTAAACCTTCTGGGAAATTT+GGG 0.248874 8_3:-65219302 Msa1302640:three_prime_UTR
TTCATTTATGTTTGAAAATT+GGG 0.254201 8_3:-65221911 Msa1302640:CDS
AGAAATTCTTTAGAGCTTTC+AGG 0.254646 8_3:+65221144 None:intergenic
TTTGAGAGTTGTAAACCTTC+TGG 0.256570 8_3:-65219312 Msa1302640:three_prime_UTR
TTCAATAAATAATGAGCTTA+AGG 0.271738 8_3:-65219864 Msa1302640:three_prime_UTR
TTCCTGAATTTAAGTGTATA+TGG 0.276896 8_3:-65221851 Msa1302640:CDS
TTTATGGCTTTGTGAGAAAA+TGG 0.288331 8_3:-65222111 Msa1302640:CDS
CCTAAAGTATTAAAACTAGA+TGG 0.289798 8_3:+65221810 None:intergenic
CTGTCCTTAACTTTCCCTTT+TGG 0.292299 8_3:+65219499 None:intergenic
TTGAAATATCCTCCTGGTTT+TGG 0.293611 8_3:-65219363 Msa1302640:three_prime_UTR
GTATGTGTTTCTTCGAGTTT+TGG 0.298933 8_3:-65222021 Msa1302640:CDS
TATTCGGTTGTTGCAGGATT+TGG 0.298936 8_3:-65221880 Msa1302640:CDS
GTTCCTAGATGGGCTGTTAT+TGG 0.301065 8_3:-65221534 Msa1302640:CDS
GAGGGAAAAGTGAGGTGTTT+TGG 0.305748 8_3:-65219386 Msa1302640:three_prime_UTR
TGGCGTGTAAGTGTTTGATA+TGG 0.312387 8_3:+65222333 None:intergenic
CAGCTTCATGAGGTGCTGTC+AGG 0.320098 8_3:+65222513 None:intergenic
ATTTGTTTGCGATTTCCATT+TGG 0.320727 8_3:-65222595 None:intergenic
CATAAGGATATCATTGTTAA+AGG 0.326625 8_3:-65221294 Msa1302640:CDS
TGCTTCAAGCATCTCTCAAC+AGG 0.330712 8_3:+65219273 None:intergenic
TTGCTTACTCATGTGAAATT+GGG 0.331574 8_3:-65221693 Msa1302640:CDS
GGTGAAACATCAACTTATTT+GGG 0.332157 8_3:-65222231 Msa1302640:CDS
TGAATGTATTCATCGGGATT+TGG 0.333951 8_3:+65222410 None:intergenic
TCTTGTGGACAACTATGATA+TGG 0.338106 8_3:-65221319 Msa1302640:CDS
ATCATAAAACAAAGCCAGTT+TGG 0.343070 8_3:+65221464 None:intergenic
TAAGGCAAGGTTGAAGAGAT+TGG 0.345643 8_3:+65222456 None:intergenic
GTCTGTCACAGTTTATTTGT+TGG 0.352141 8_3:-65219416 Msa1302640:three_prime_UTR
GTTTGAGTCTTTGAAGCGTT+TGG 0.352357 8_3:-65221970 Msa1302640:CDS
ATTGGATATTCTTGATGCTT+GGG 0.353018 8_3:-65219533 Msa1302640:three_prime_UTR
TTCCATATACACTTAAATTC+AGG 0.357877 8_3:+65221849 None:intergenic
CACCAACAATTTGCCTCAAA+AGG 0.368885 8_3:+65222153 None:intergenic
AGTCTGATATAGTTCCTAGA+TGG 0.373472 8_3:-65221545 Msa1302640:CDS
TGTAACCGTGGGTTGAATAC+TGG 0.373922 8_3:-65219585 Msa1302640:three_prime_UTR
TGTTGGTCATCTCCACATAT+TGG 0.374229 8_3:+65221364 None:intergenic
ATCGGGATTTGGAATGGTTA+AGG 0.374354 8_3:+65222421 None:intergenic
TTTAATACTTTAGGATTTAG+TGG 0.375338 8_3:-65221801 Msa1302640:CDS
ACCTATTAGTAGTAACCTTT+AGG 0.376989 8_3:+65219690 None:intergenic
CATTGGATATTCTTGATGCT+TGG 0.377065 8_3:-65219534 Msa1302640:three_prime_UTR
AATTGTGTCTGACGTCAATA+AGG 0.381165 8_3:+65219656 None:intergenic
TTGAGAGTTGTAAACCTTCT+GGG 0.383130 8_3:-65219311 Msa1302640:three_prime_UTR
CGATATTGAGGAGGAGGTTG+AGG 0.384212 8_3:+65222285 None:intergenic
AGCTCTAAAGAATTTCTTCC+AGG 0.386230 8_3:-65221138 Msa1302640:intron
CTTGATGCTTGGGCACCAAT+GGG 0.387314 8_3:-65219523 Msa1302640:three_prime_UTR
TAAGTGTTTGATATGGGTTT+TGG 0.387861 8_3:+65222340 None:intergenic
ACTACAACAGTCTCTTTATC+AGG 0.391900 8_3:+65221621 None:intergenic
GGGAAAGTTAAGGACAGAAC+TGG 0.395012 8_3:-65219493 Msa1302640:three_prime_UTR
CTGTTGTAGTTGATATAGTT+AGG 0.396258 8_3:-65221608 Msa1302640:CDS
TTTGTTTGCGATTTCCATTT+GGG 0.396708 8_3:-65222594 None:intergenic
AAGATAAGAAAATGCTACTT+TGG 0.398128 8_3:-65219813 Msa1302640:three_prime_UTR
TGGGCACCAATGGGGCCAAA+AGG 0.407099 8_3:-65219514 Msa1302640:three_prime_UTR
TGTTGAGGCCAATGCCAAAC+TGG 0.413744 8_3:-65221478 Msa1302640:CDS
TACAGAATTGCTCTTGCCTT+GGG 0.415431 8_3:-65219784 Msa1302640:three_prime_UTR
GCTTAGGATCACTCCAGAAA+TGG 0.419281 8_3:-65221733 Msa1302640:CDS
CATTGTTAAAGGTGTCTCAT+TGG 0.422377 8_3:-65221283 Msa1302640:CDS
GTTGGTCATCTCCACATATT+GGG 0.422883 8_3:+65221365 None:intergenic
CAACTATGATATGGAACATA+AGG 0.423757 8_3:-65221310 Msa1302640:CDS
CATGAGGTGCTGTCAGGGTC+AGG 0.427725 8_3:+65222519 None:intergenic
CTAGATGGGCTGTTATTGGT+TGG 0.429296 8_3:-65221530 Msa1302640:CDS
TACTATACAGTTTGTTGCCC+TGG 0.429553 8_3:+65219929 None:intergenic
GCCTAAAGGTTACTACTAAT+AGG 0.432749 8_3:-65219691 Msa1302640:three_prime_UTR
CTAATCTTCACCTTCCCAAA+TGG 0.435274 8_3:+65222580 None:intergenic
TTCACCGAACCAAGGAGCTT+AGG 0.436137 8_3:+65222248 None:intergenic
GTTTGAGAGAGATTTCGATT+TGG 0.436427 8_3:+65222486 None:intergenic
CACCTCTACCCTAAGCTCCT+TGG 0.438635 8_3:-65222257 Msa1302640:CDS
GGCGTAACCGTCTGTGATTA+TGG 0.440088 8_3:+65222313 None:intergenic
TTTGGAATGGTTAAGGAGAA+TGG 0.444668 8_3:+65222428 None:intergenic
TTCACTTATTTCCATCATGA+TGG 0.449338 8_3:-65222549 Msa1302640:exon
GATGAAATGATTCGCGTCTC+GGG 0.452056 8_3:-65222203 Msa1302640:CDS
TCTTGATGCTTGGGCACCAA+TGG 0.454394 8_3:-65219524 Msa1302640:three_prime_UTR
TCACCGAACCAAGGAGCTTA+GGG 0.454863 8_3:+65222249 None:intergenic
CGAGTAGGTATGCTTTGCTT+AGG 0.455189 8_3:-65221749 Msa1302640:CDS
TTGAGTTGAATGTATTCATC+GGG 0.458483 8_3:+65222404 None:intergenic
CGATGAAATGATTCGCGTCT+CGG 0.465844 8_3:-65222204 Msa1302640:CDS
CTACCCTAAGCTCCTTGGTT+CGG 0.475301 8_3:-65222252 Msa1302640:CDS
GAGGAATTGTCAATGGTCAT+TGG 0.482408 8_3:-65219551 Msa1302640:three_prime_UTR
AAACAAAGCCAGTTTGGCAT+TGG 0.483784 8_3:+65221470 None:intergenic
GTACAGAATTGCTCTTGCCT+TGG 0.483977 8_3:-65219785 Msa1302640:three_prime_UTR
GAAATGGGGTTGGGTGAGAA+TGG 0.487022 8_3:+65222364 None:intergenic
TTGAGTAGGCTATTATCATC+TGG 0.488482 8_3:-65221171 Msa1302640:CDS
AGAGGTGGTGGACGATATTG+AGG 0.489507 8_3:+65222273 None:intergenic
AGCTTCATGAGGTGCTGTCA+GGG 0.494004 8_3:+65222514 None:intergenic
GCAAGGTTGAAGAGATTGGA+GGG 0.497565 8_3:+65222460 None:intergenic
ATGATTCGCGTCTCGGGGAT+CGG 0.500376 8_3:-65222197 Msa1302640:CDS
TTTAGTGAAGGGGACAATGT+AGG 0.502732 8_3:+65221201 None:intergenic
ATTGTCCCCTTCACTAAAAG+AGG 0.504227 8_3:-65221196 Msa1302640:CDS
GAATAATCTCGTTCGGTGGA+TGG 0.504819 8_3:+65221568 None:intergenic
TTCTTGAACACACTTACAGC+TGG 0.505903 8_3:+65219746 None:intergenic
GGCATTTGATGTGGTTTGCT+AGG 0.507728 8_3:-65221659 Msa1302640:CDS
ATTGAGGAGGAGGTTGAGGA+AGG 0.508535 8_3:+65222289 None:intergenic
TCAGACTGAATAATCTCGTT+CGG 0.510418 8_3:+65221561 None:intergenic
CATGATGGAAATAAGTGAAA+TGG 0.512699 8_3:+65222553 None:intergenic
AACCAAGGAGCTTAGGGTAG+AGG 0.517188 8_3:+65222255 None:intergenic
GGAGCTTAGGGTAGAGGTGG+TGG 0.517887 8_3:+65222261 None:intergenic
TGCTTACTCATGTGAAATTG+GGG 0.519131 8_3:-65221692 Msa1302640:CDS
GCTGATCATTGTAGGGTGAA+TGG 0.520278 8_3:-65221999 Msa1302640:CDS
TTTCTCAGATTTATTTAACT+AGG 0.520412 8_3:-65221776 Msa1302640:CDS
CAACCAATAACAGCCCATCT+AGG 0.521491 8_3:+65221531 None:intergenic
ACCAACAATTTGCCTCAAAA+GGG 0.521729 8_3:+65222154 None:intergenic
GGCGTGTAAGTGTTTGATAT+GGG 0.523661 8_3:+65222334 None:intergenic
TGAATTTAAGTGTATATGGA+AGG 0.525588 8_3:-65221847 Msa1302640:CDS
GGCAAGGTTGAAGAGATTGG+AGG 0.528744 8_3:+65222459 None:intergenic
GGTGGACGATATTGAGGAGG+AGG 0.529438 8_3:+65222279 None:intergenic
TGAGAGATGCTTGAAGCAGA+TGG 0.532481 8_3:-65219268 Msa1302640:three_prime_UTR
CTAAAGTATTAAAACTAGAT+GGG 0.533260 8_3:+65221811 None:intergenic
GCATTCTATCACCCAATATG+TGG 0.534310 8_3:-65221376 Msa1302640:CDS
TGAGTCTTTGAAGCGTTTGG+AGG 0.535228 8_3:-65221967 Msa1302640:CDS
GAGGAGGAGGTTGAGGAAGG+TGG 0.536363 8_3:+65222292 None:intergenic
TGCACCATCAACAAAATAGC+AGG 0.538696 8_3:+65221396 None:intergenic
GGGCACCAATGGGGCCAAAA+GGG 0.545446 8_3:-65219513 Msa1302640:three_prime_UTR
GTTGAGTTGAATGTATTCAT+CGG 0.545569 8_3:+65222403 None:intergenic
GGTGCTGTCAGGGTCAGGTT+CGG 0.546218 8_3:+65222524 None:intergenic
GTATTCATCGGGATTTGGAA+TGG 0.547263 8_3:+65222415 None:intergenic
ATTTGTATAGATTGTAACCG+TGG 0.551096 8_3:-65219597 Msa1302640:three_prime_UTR
TTTATTTGTTGGCTAAAGAG+AGG 0.554603 8_3:-65219405 Msa1302640:three_prime_UTR
TTCATCTACATAAACGCAGT+TGG 0.555632 8_3:+65219723 None:intergenic
AATACTTGCATGTGAACTCA+AGG 0.556834 8_3:-65219467 Msa1302640:three_prime_UTR
GAGAATGGTGGTTTAAGGCA+AGG 0.557227 8_3:+65222443 None:intergenic
TGAAATTGGGGCATCAAAAG+AGG 0.557265 8_3:-65221680 Msa1302640:CDS
TTATTTGTTGGCTAAAGAGA+GGG 0.558414 8_3:-65219404 Msa1302640:three_prime_UTR
TTTGCGATTTCCATTTGGGA+AGG 0.558427 8_3:-65222590 None:intergenic
TAATCCCCAAATTTCCCAGA+AGG 0.559142 8_3:+65219297 None:intergenic
TTTATGTTTGAAAATTGGGA+GGG 0.560716 8_3:-65221907 Msa1302640:CDS
ATGAAGTGCTCCATGCCTAA+AGG 0.562635 8_3:-65219705 Msa1302640:three_prime_UTR
TTTCGATTTCTTGAAAGCAA+AGG 0.563601 8_3:-65221258 Msa1302640:CDS
ATGAAATGATTCGCGTCTCG+GGG 0.570789 8_3:-65222202 Msa1302640:CDS
GGGGCCAAAAGGGAAAGTTA+AGG 0.571105 8_3:-65219503 Msa1302640:three_prime_UTR
CACCGATGATCACCAAAACC+AGG 0.573763 8_3:+65219351 None:intergenic
TTAGTAGTAACCTTTAGGCA+TGG 0.574038 8_3:+65219695 None:intergenic
ATCAAAAGAGGCATTTGATG+TGG 0.574765 8_3:-65221668 Msa1302640:CDS
ATTTATGTTTGAAAATTGGG+AGG 0.576348 8_3:-65221908 Msa1302640:CDS
GTCTGATATAGTTCCTAGAT+GGG 0.576556 8_3:-65221544 Msa1302640:CDS
GTTGGGTGAGAATGGCGTGA+AGG 0.583675 8_3:+65222372 None:intergenic
TAAACCTTCTGGGAAATTTG+GGG 0.584591 8_3:-65219301 Msa1302640:three_prime_UTR
TTTGTATAGATTGTAACCGT+GGG 0.585646 8_3:-65219596 Msa1302640:three_prime_UTR
TAGGAAGAAGAGTTATGTTG+AGG 0.590426 8_3:-65221493 Msa1302640:CDS
CAGGTTCGGAACCATCATGA+TGG 0.594502 8_3:+65222538 None:intergenic
ATTTCTGTGTGAAGATAGTG+AGG 0.595600 8_3:-65221941 Msa1302640:CDS
GGAAAGTTAAGGACAGAACT+GGG 0.599987 8_3:-65219492 Msa1302640:three_prime_UTR
TTGCATGTGAACTCAAGGAT+AGG 0.601616 8_3:-65219462 Msa1302640:three_prime_UTR
GGTGGTGGACGATATTGAGG+AGG 0.601801 8_3:+65222276 None:intergenic
TTGTCCCCTTCACTAAAAGA+GGG 0.609008 8_3:-65221195 Msa1302640:CDS
CAAGGAGCTTAGGGTAGAGG+TGG 0.611596 8_3:+65222258 None:intergenic
GACTGAATAATCTCGTTCGG+TGG 0.612467 8_3:+65221564 None:intergenic
GGAATGGTTAAGGAGAATGG+TGG 0.620887 8_3:+65222431 None:intergenic
ATTTAACTAGGACTTCGAGT+AGG 0.626493 8_3:-65221764 Msa1302640:CDS
AAACCACTGCACAAAACATG+TGG 0.627684 8_3:+65222044 None:intergenic
CGAGACGCGAATCATTTCAT+CGG 0.628582 8_3:+65222205 None:intergenic
AAACTCCAGTATTCAACCCA+CGG 0.636498 8_3:+65219580 None:intergenic
CACTAAAAGAGGGATTGAGT+AGG 0.637046 8_3:-65221185 Msa1302640:CDS
GTTCTATCACAATACTCCCA+AGG 0.644366 8_3:+65219768 None:intergenic
TTTCAGTACTGAGTCAGCCA+GGG 0.648778 8_3:-65219946 Msa1302640:intron
GTTGATGTTTCACCGAACCA+AGG 0.650917 8_3:+65222240 None:intergenic
CAGAAATGGAGACACAGTTG+CGG 0.652784 8_3:-65221719 Msa1302640:CDS
TTGATGCTTGGGCACCAATG+GGG 0.668803 8_3:-65219522 Msa1302640:three_prime_UTR
GCTAAAGAGAGGGAAAAGTG+AGG 0.681796 8_3:-65219394 Msa1302640:three_prime_UTR
TTACACGCCATAATCACAGA+CGG 0.704647 8_3:-65222320 Msa1302640:CDS
TTTCTGTGTGAAGATAGTGA+GGG 0.713281 8_3:-65221940 Msa1302640:CDS
GCTTCAAGCATCTCTCAACA+GGG 0.726539 8_3:+65219274 None:intergenic
GAATGGCGTGAAGGATAGCG+TGG 0.737315 8_3:+65222381 None:intergenic
CGATGATCACCAAAACCAGG+AGG 0.749181 8_3:+65219354 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAATTCTAAATTAAAAATAA+TGG + chr8_3:65221510-65221529 None:intergenic 10.0%
!!! TATTTTTAATTTAGAATTGA+TGG - chr8_3:65221511-65221530 Msa1302640:CDS 10.0%
!! TTTCATTTATGTTTGAAAAT+TGG - chr8_3:65219882-65219901 Msa1302640:three_prime_UTR 15.0%
!! TTCATTTATGTTTGAAAATT+GGG - chr8_3:65219883-65219902 Msa1302640:three_prime_UTR 15.0%
!! ATCAAAATACAAAAAAGAAA+TGG + chr8_3:65221779-65221798 None:intergenic 15.0%
!! ATTTCAGTGATGATAATTTA+TGG - chr8_3:65219667-65219686 Msa1302640:three_prime_UTR 20.0%
!!! CTAAAGTATTAAAACTAGAT+GGG + chr8_3:65219986-65220005 None:intergenic 20.0%
!!! TTTAATACTTTAGGATTTAG+TGG - chr8_3:65219993-65220012 Msa1302640:intron 20.0%
!! TTTCTCAGATTTATTTAACT+AGG - chr8_3:65220018-65220037 Msa1302640:intron 20.0%
!! TTTGTCTTTAACCTAAATTA+AGG - chr8_3:65220719-65220738 Msa1302640:intron 20.0%
!! ACTTGAATCTATATAAGAAA+GGG + chr8_3:65220797-65220816 None:intergenic 20.0%
!!! AAAACTGAAATCTATTTTCA+GGG + chr8_3:65221146-65221165 None:intergenic 20.0%
!!! TAAAACTGAAATCTATTTTC+AGG + chr8_3:65221147-65221166 None:intergenic 20.0%
!!! AGTTTTATTTCATATTCTAC+TGG - chr8_3:65221160-65221179 Msa1302640:CDS 20.0%
!!! AAAAGTAGCTTTATAATGTT+GGG + chr8_3:65221335-65221354 None:intergenic 20.0%
!!! AAAAAGTAGCTTTATAATGT+TGG + chr8_3:65221336-65221355 None:intergenic 20.0%
!!! GATGGATTATTTTGAAATAT+AGG - chr8_3:65221529-65221548 Msa1302640:CDS 20.0%
!!! CATTTTGTTCTTTATTTGAT+TGG - chr8_3:65221808-65221827 Msa1302640:CDS 20.0%
!! GCTCATTATTTATTGAAAAA+TGG + chr8_3:65221927-65221946 None:intergenic 20.0%
!! TTCAATAAATAATGAGCTTA+AGG - chr8_3:65221930-65221949 Msa1302640:CDS 20.0%
!! TGACACTTTTATTGGATAAA+TGG - chr8_3:65219706-65219725 Msa1302640:three_prime_UTR 25.0%
!! GACACTTTTATTGGATAAAT+GGG - chr8_3:65219707-65219726 Msa1302640:three_prime_UTR 25.0%
! ATTTATGTTTGAAAATTGGG+AGG - chr8_3:65219886-65219905 Msa1302640:three_prime_UTR 25.0%
! TTTATGTTTGAAAATTGGGA+GGG - chr8_3:65219887-65219906 Msa1302640:three_prime_UTR 25.0%
! TTCCTGAATTTAAGTGTATA+TGG - chr8_3:65219943-65219962 Msa1302640:CDS 25.0%
! TTCCATATACACTTAAATTC+AGG + chr8_3:65219948-65219967 None:intergenic 25.0%
! TGAATTTAAGTGTATATGGA+AGG - chr8_3:65219947-65219966 Msa1302640:intron 25.0%
!! CCTAAAGTATTAAAACTAGA+TGG + chr8_3:65219987-65220006 None:intergenic 25.0%
!!! CCATCTAGTTTTAATACTTT+AGG - chr8_3:65219984-65220003 Msa1302640:intron 25.0%
! CATAAGGATATCATTGTTAA+AGG - chr8_3:65220500-65220519 Msa1302640:intron 25.0%
! GACAAATTTAAGAAACTTGA+AGG + chr8_3:65220705-65220724 None:intergenic 25.0%
! ATTCTTAGCTACCTTAATTT+AGG + chr8_3:65220733-65220752 None:intergenic 25.0%
! TTGAATCTATATAAGAAAGG+GGG + chr8_3:65220795-65220814 None:intergenic 25.0%
! CTTGAATCTATATAAGAAAG+GGG + chr8_3:65220796-65220815 None:intergenic 25.0%
! CACTTGAATCTATATAAGAA+AGG + chr8_3:65220798-65220817 None:intergenic 25.0%
! ATTTCTTAACAAAAGACCAA+AGG + chr8_3:65220891-65220910 None:intergenic 25.0%
!!! TTTGGTCTTTTGTTAAGAAA+TGG - chr8_3:65220890-65220909 Msa1302640:intron 25.0%
! AGAACAATAATCTGGATAAA+AGG + chr8_3:65221113-65221132 None:intergenic 25.0%
!! TATCTAGAAATAATTTTGCC+TGG - chr8_3:65221627-65221646 Msa1302640:CDS 25.0%
!!! AGTTCTGTAAAAGCTTTAAA+AGG + chr8_3:65221750-65221769 None:intergenic 25.0%
!! AAGATAAGAAAATGCTACTT+TGG - chr8_3:65221981-65222000 Msa1302640:CDS 25.0%
! CATGATGGAAATAAGTGAAA+TGG + chr8_3:65219244-65219263 None:intergenic 30.0%
TTCACTTATTTCCATCATGA+TGG - chr8_3:65219245-65219264 Msa1302640:three_prime_UTR 30.0%
!! TTGAGTTGAATGTATTCATC+GGG + chr8_3:65219393-65219412 None:intergenic 30.0%
!! GTTGAGTTGAATGTATTCAT+CGG + chr8_3:65219394-65219413 None:intergenic 30.0%
! TAAGTGTTTGATATGGGTTT+TGG + chr8_3:65219457-65219476 None:intergenic 30.0%
GGTGAAACATCAACTTATTT+GGG - chr8_3:65219563-65219582 Msa1302640:three_prime_UTR 30.0%
!!! CTTTATTGATTTCCCTTTTG+AGG - chr8_3:65219628-65219647 Msa1302640:three_prime_UTR 30.0%
!! TTTATGGCTTTGTGAGAAAA+TGG - chr8_3:65219683-65219702 Msa1302640:three_prime_UTR 30.0%
! GAAAATGGTGACACTTTTAT+TGG - chr8_3:65219698-65219717 Msa1302640:three_prime_UTR 30.0%
! AAATTGGGAGGGATTTTATT+CGG - chr8_3:65219898-65219917 Msa1302640:three_prime_UTR 30.0%
TTTGCTTACTCATGTGAAAT+TGG - chr8_3:65220100-65220119 Msa1302640:intron 30.0%
TTGCTTACTCATGTGAAATT+GGG - chr8_3:65220101-65220120 Msa1302640:intron 30.0%
! CTGTTGTAGTTGATATAGTT+AGG - chr8_3:65220186-65220205 Msa1302640:intron 30.0%
ATCATAAAACAAAGCCAGTT+TGG + chr8_3:65220333-65220352 None:intergenic 30.0%
!!! AACTGGCTTTGTTTTATGAT+TGG - chr8_3:65220333-65220352 Msa1302640:intron 30.0%
!!! TTGGCTCTTTTTTGATGAAA+AGG - chr8_3:65220352-65220371 Msa1302640:intron 30.0%
!! TGAGTTTTTGTTACTTCTTG+TGG - chr8_3:65220460-65220479 Msa1302640:intron 30.0%
CAACTATGATATGGAACATA+AGG - chr8_3:65220484-65220503 Msa1302640:intron 30.0%
TTTCGATTTCTTGAAAGCAA+AGG - chr8_3:65220536-65220555 Msa1302640:intron 30.0%
!! AGAAATTCTTTAGAGCTTTC+AGG + chr8_3:65220653-65220672 None:intergenic 30.0%
AAGGTAGCTAAGAATGTTAT+AGG - chr8_3:65220738-65220757 Msa1302640:intron 30.0%
! AGAATGTTATAGGAGTATGT+AGG - chr8_3:65220748-65220767 Msa1302640:intron 30.0%
GCTATATATACATGTGCTAA+TGG + chr8_3:65220848-65220867 None:intergenic 30.0%
!!! TGTTTTGTTTGCATTTCCTT+TGG - chr8_3:65220872-65220891 Msa1302640:intron 30.0%
TTAAGAAATGGCTGTTTAGT+TGG - chr8_3:65220902-65220921 Msa1302640:intron 30.0%
TAAGAAATGGCTGTTTAGTT+GGG - chr8_3:65220903-65220922 Msa1302640:intron 30.0%
!!! ACCAAATGCATTTTTAAGTG+TGG - chr8_3:65220956-65220975 Msa1302640:intron 30.0%
ACCACACTTAAAAATGCATT+TGG + chr8_3:65220960-65220979 None:intergenic 30.0%
TATGATGCAGAACAATAATC+TGG + chr8_3:65221121-65221140 None:intergenic 30.0%
TATAATGTTGGGTTATATCC+AGG + chr8_3:65221324-65221343 None:intergenic 30.0%
ATGATGCTAAAGAAGTTAAG+TGG + chr8_3:65221415-65221434 None:intergenic 30.0%
TTTAAAAGTCAACCTCAACT+AGG + chr8_3:65221485-65221504 None:intergenic 30.0%
CAGAATATCTTTACGAACAT+GGG + chr8_3:65221659-65221678 None:intergenic 30.0%
ACAGAATATCTTTACGAACA+TGG + chr8_3:65221660-65221679 None:intergenic 30.0%
! GAAAAATGGTGATGTAAGTA+TGG + chr8_3:65221913-65221932 None:intergenic 30.0%
ACCTATTAGTAGTAACCTTT+AGG + chr8_3:65222107-65222126 None:intergenic 30.0%
ATTTGTATAGATTGTAACCG+TGG - chr8_3:65222197-65222216 Msa1302640:CDS 30.0%
TTTGTATAGATTGTAACCGT+GGG - chr8_3:65222198-65222217 Msa1302640:CDS 30.0%
!!! AATACTGGAGTTTTTTGTTG+AGG - chr8_3:65222224-65222243 Msa1302640:CDS 30.0%
! TTTTGTTGAGGAATTGTCAA+TGG - chr8_3:65222236-65222255 Msa1302640:CDS 30.0%
ATTGGATATTCTTGATGCTT+GGG - chr8_3:65222261-65222280 Msa1302640:CDS 30.0%
! TTTATTTGTTGGCTAAAGAG+AGG - chr8_3:65222389-65222408 Msa1302640:CDS 30.0%
! TTATTTGTTGGCTAAAGAGA+GGG - chr8_3:65222390-65222409 Msa1302640:CDS 30.0%
!!! ATTTGGTTTTCAGCTTCATG+AGG + chr8_3:65219294-65219313 None:intergenic 35.0%
GTTTGAGAGAGATTTCGATT+TGG + chr8_3:65219311-65219330 None:intergenic 35.0%
TTAAGGAGAATGGTGGTTTA+AGG + chr8_3:65219359-65219378 None:intergenic 35.0%
! TTTGGAATGGTTAAGGAGAA+TGG + chr8_3:65219369-65219388 None:intergenic 35.0%
TGAATGTATTCATCGGGATT+TGG + chr8_3:65219387-65219406 None:intergenic 35.0%
!!! ATATGGGTTTTGGAGAAATG+GGG + chr8_3:65219447-65219466 None:intergenic 35.0%
!!! GATATGGGTTTTGGAGAAAT+GGG + chr8_3:65219448-65219467 None:intergenic 35.0%
!!! TGATATGGGTTTTGGAGAAA+TGG + chr8_3:65219449-65219468 None:intergenic 35.0%
CGGTGAAACATCAACTTATT+TGG - chr8_3:65219562-65219581 Msa1302640:three_prime_UTR 35.0%
ACCAACAATTTGCCTCAAAA+GGG + chr8_3:65219643-65219662 None:intergenic 35.0%
!! GTATGTGTTTCTTCGAGTTT+TGG - chr8_3:65219773-65219792 Msa1302640:three_prime_UTR 35.0%
!!! AGTTTTGGCTGATCATTGTA+GGG - chr8_3:65219788-65219807 Msa1302640:three_prime_UTR 35.0%
ATTTCTGTGTGAAGATAGTG+AGG - chr8_3:65219853-65219872 Msa1302640:three_prime_UTR 35.0%
TTTCTGTGTGAAGATAGTGA+GGG - chr8_3:65219854-65219873 Msa1302640:three_prime_UTR 35.0%
ATTTAACTAGGACTTCGAGT+AGG - chr8_3:65220030-65220049 Msa1302640:intron 35.0%
TGCTTACTCATGTGAAATTG+GGG - chr8_3:65220102-65220121 Msa1302640:intron 35.0%
!! ATCAAAAGAGGCATTTGATG+TGG - chr8_3:65220126-65220145 Msa1302640:intron 35.0%
ACTACAACAGTCTCTTTATC+AGG + chr8_3:65220176-65220195 None:intergenic 35.0%
TCAGACTGAATAATCTCGTT+CGG + chr8_3:65220236-65220255 None:intergenic 35.0%
AGTCTGATATAGTTCCTAGA+TGG - chr8_3:65220249-65220268 Msa1302640:intron 35.0%
GTCTGATATAGTTCCTAGAT+GGG - chr8_3:65220250-65220269 Msa1302640:intron 35.0%
!!! GTTGGCTTTTGACAACTTTT+AGG - chr8_3:65220282-65220301 Msa1302640:intron 35.0%
TAGGAAGAAGAGTTATGTTG+AGG - chr8_3:65220301-65220320 Msa1302640:intron 35.0%
!!! AGAACCTGCTATTTTGTTGA+TGG - chr8_3:65220394-65220413 Msa1302640:intron 35.0%
! CAAAAACTCAAGAAGAGTGT+TGG + chr8_3:65220450-65220469 None:intergenic 35.0%
TCTTGTGGACAACTATGATA+TGG - chr8_3:65220475-65220494 Msa1302640:intron 35.0%
!! CATTGTTAAAGGTGTCTCAT+TGG - chr8_3:65220511-65220530 Msa1302640:intron 35.0%
! TCAATCCCTCTTTTAGTGAA+GGG + chr8_3:65220607-65220626 None:intergenic 35.0%
TTGAGTAGGCTATTATCATC+TGG - chr8_3:65220623-65220642 Msa1302640:intron 35.0%
!! AGCTCTAAAGAATTTCTTCC+AGG - chr8_3:65220656-65220675 Msa1302640:intron 35.0%
ATGATAGACTAGAACATACC+TGG + chr8_3:65220677-65220696 None:intergenic 35.0%
AGGTATGTTCTAGTCTATCA+TGG - chr8_3:65220676-65220695 Msa1302640:intron 35.0%
! TTATAGGAGTATGTAGGAAG+TGG - chr8_3:65220754-65220773 Msa1302640:intron 35.0%
AATCAGTTTCATGTGTGGTA+TGG - chr8_3:65220980-65220999 Msa1302640:intron 35.0%
TGAATTATGTAGCTGCTGTT+TGG + chr8_3:65221031-65221050 None:intergenic 35.0%
TTCTTTGTAGTCTCACTCTT+CGG - chr8_3:65221265-65221284 Msa1302640:CDS 35.0%
GTGATACTTGACTTAAAAGC+AGG + chr8_3:65221373-65221392 None:intergenic 35.0%
GCATCATTAGCATGAAGTTT+AGG - chr8_3:65221428-65221447 Msa1302640:CDS 35.0%
ATCAGTATAAGACCTAGTTG+AGG - chr8_3:65221470-65221489 Msa1302640:CDS 35.0%
CGAGCTCTATATTCAATCAA+AGG - chr8_3:65221603-65221622 Msa1302640:CDS 35.0%
TTCATCTACATAAACGCAGT+TGG + chr8_3:65222074-65222093 None:intergenic 35.0%
TTAGTAGTAACCTTTAGGCA+TGG + chr8_3:65222102-65222121 None:intergenic 35.0%
GCCTAAAGGTTACTACTAAT+AGG - chr8_3:65222103-65222122 Msa1302640:CDS 35.0%
AATTGTGTCTGACGTCAATA+AGG + chr8_3:65222141-65222160 None:intergenic 35.0%
CATTGGATATTCTTGATGCT+TGG - chr8_3:65222260-65222279 Msa1302640:CDS 35.0%
AATACTTGCATGTGAACTCA+AGG - chr8_3:65222327-65222346 Msa1302640:CDS 35.0%
GTCTGTCACAGTTTATTTGT+TGG - chr8_3:65222378-65222397 Msa1302640:CDS 35.0%
!! TTTTGGTTGAAATATCCTCC+TGG - chr8_3:65222425-65222444 Msa1302640:CDS 35.0%
! TTGAAATATCCTCCTGGTTT+TGG - chr8_3:65222431-65222450 Msa1302640:CDS 35.0%
TTTGAGAGTTGTAAACCTTC+TGG - chr8_3:65222482-65222501 Msa1302640:CDS 35.0%
TTGAGAGTTGTAAACCTTCT+GGG - chr8_3:65222483-65222502 Msa1302640:CDS 35.0%
! TGTAAACCTTCTGGGAAATT+TGG - chr8_3:65222491-65222510 Msa1302640:CDS 35.0%
! GTAAACCTTCTGGGAAATTT+GGG - chr8_3:65222492-65222511 Msa1302640:CDS 35.0%
! TAAACCTTCTGGGAAATTTG+GGG - chr8_3:65222493-65222512 Msa1302640:CDS 35.0%
CTAATCTTCACCTTCCCAAA+TGG + chr8_3:65219217-65219236 None:intergenic 40.0%
TAAGGCAAGGTTGAAGAGAT+TGG + chr8_3:65219341-65219360 None:intergenic 40.0%
! ATCGGGATTTGGAATGGTTA+AGG + chr8_3:65219376-65219395 None:intergenic 40.0%
GTATTCATCGGGATTTGGAA+TGG + chr8_3:65219382-65219401 None:intergenic 40.0%
GGCGTGTAAGTGTTTGATAT+GGG + chr8_3:65219463-65219482 None:intergenic 40.0%
TGGCGTGTAAGTGTTTGATA+TGG + chr8_3:65219464-65219483 None:intergenic 40.0%
TTACACGCCATAATCACAGA+CGG - chr8_3:65219474-65219493 Msa1302640:three_prime_UTR 40.0%
!!! TCCCTTTTGAGGCAAATTGT+TGG - chr8_3:65219639-65219658 Msa1302640:three_prime_UTR 40.0%
CACCAACAATTTGCCTCAAA+AGG + chr8_3:65219644-65219663 None:intergenic 40.0%
!!! CTTTTGAGGCAAATTGTTGG+TGG - chr8_3:65219642-65219661 Msa1302640:three_prime_UTR 40.0%
AAACCACTGCACAAAACATG+TGG + chr8_3:65219753-65219772 None:intergenic 40.0%
!!! GAGTTTTGGCTGATCATTGT+AGG - chr8_3:65219787-65219806 Msa1302640:three_prime_UTR 40.0%
!! GTTTGAGTCTTTGAAGCGTT+TGG - chr8_3:65219824-65219843 Msa1302640:three_prime_UTR 40.0%
! GGATTTTATTCGGTTGTTGC+AGG - chr8_3:65219908-65219927 Msa1302640:three_prime_UTR 40.0%
TATTCGGTTGTTGCAGGATT+TGG - chr8_3:65219914-65219933 Msa1302640:exon 40.0%
! TGAAATTGGGGCATCAAAAG+AGG - chr8_3:65220114-65220133 Msa1302640:intron 40.0%
AAACAAAGCCAGTTTGGCAT+TGG + chr8_3:65220327-65220346 None:intergenic 40.0%
TGCACCATCAACAAAATAGC+AGG + chr8_3:65220401-65220420 None:intergenic 40.0%
GCATTCTATCACCCAATATG+TGG - chr8_3:65220418-65220437 Msa1302640:intron 40.0%
GTTGGTCATCTCCACATATT+GGG + chr8_3:65220432-65220451 None:intergenic 40.0%
TGTTGGTCATCTCCACATAT+TGG + chr8_3:65220433-65220452 None:intergenic 40.0%
TTTAGTGAAGGGGACAATGT+AGG + chr8_3:65220596-65220615 None:intergenic 40.0%
ATTGTCCCCTTCACTAAAAG+AGG - chr8_3:65220598-65220617 Msa1302640:intron 40.0%
TTGTCCCCTTCACTAAAAGA+GGG - chr8_3:65220599-65220618 Msa1302640:intron 40.0%
! CAATCCCTCTTTTAGTGAAG+GGG + chr8_3:65220606-65220625 None:intergenic 40.0%
! CTCAATCCCTCTTTTAGTGA+AGG + chr8_3:65220608-65220627 None:intergenic 40.0%
CACTAAAAGAGGGATTGAGT+AGG - chr8_3:65220609-65220628 Msa1302640:intron 40.0%
GTGGTAATCAGTTTCATGTG+TGG - chr8_3:65220975-65220994 Msa1302640:intron 40.0%
GGTCAAAGACAAATCTTGCA+CGG + chr8_3:65221092-65221111 None:intergenic 40.0%
! TCTTGCTGTGACACATTTAC+TGG - chr8_3:65221225-65221244 Msa1302640:CDS 40.0%
GAGTGAGACTACAAAGAAGT+TGG + chr8_3:65221263-65221282 None:intergenic 40.0%
ATGTTGTAAGACGAGTAACC+TGG - chr8_3:65221303-65221322 Msa1302640:CDS 40.0%
AGCATGAAGTTTAGGCAACT+TGG - chr8_3:65221436-65221455 Msa1302640:CDS 40.0%
GATTGAATATAGAGCTCGCA+TGG + chr8_3:65221601-65221620 None:intergenic 40.0%
TACGAACATGGGAATATACC+AGG + chr8_3:65221648-65221667 None:intergenic 40.0%
!! TACTATACAGTTTGTTGCCC+TGG + chr8_3:65221868-65221887 None:intergenic 40.0%
TACAGAATTGCTCTTGCCTT+GGG - chr8_3:65222010-65222029 Msa1302640:CDS 40.0%
GTTCTATCACAATACTCCCA+AGG + chr8_3:65222029-65222048 None:intergenic 40.0%
TTCTTGAACACACTTACAGC+TGG + chr8_3:65222051-65222070 None:intergenic 40.0%
AAACTCCAGTATTCAACCCA+CGG + chr8_3:65222217-65222236 None:intergenic 40.0%
GAGGAATTGTCAATGGTCAT+TGG - chr8_3:65222243-65222262 Msa1302640:CDS 40.0%
! CTGTCCTTAACTTTCCCTTT+TGG + chr8_3:65222298-65222317 None:intergenic 40.0%
GGAAAGTTAAGGACAGAACT+GGG - chr8_3:65222302-65222321 Msa1302640:CDS 40.0%
TTGCATGTGAACTCAAGGAT+AGG - chr8_3:65222332-65222351 Msa1302640:CDS 40.0%
TAATCCCCAAATTTCCCAGA+AGG + chr8_3:65222500-65222519 None:intergenic 40.0%
GCAAGGTTGAAGAGATTGGA+GGG + chr8_3:65219337-65219356 None:intergenic 45.0%
! GAGAATGGTGGTTTAAGGCA+AGG + chr8_3:65219354-65219373 None:intergenic 45.0%
GGAATGGTTAAGGAGAATGG+TGG + chr8_3:65219366-65219385 None:intergenic 45.0%
!!! GGTTTTGGAGAAATGGGGTT+GGG + chr8_3:65219442-65219461 None:intergenic 45.0%
GTTGATGTTTCACCGAACCA+AGG + chr8_3:65219557-65219576 None:intergenic 45.0%
CGAGACGCGAATCATTTCAT+CGG + chr8_3:65219592-65219611 None:intergenic 45.0%
CGATGAAATGATTCGCGTCT+CGG - chr8_3:65219590-65219609 Msa1302640:three_prime_UTR 45.0%
GATGAAATGATTCGCGTCTC+GGG - chr8_3:65219591-65219610 Msa1302640:three_prime_UTR 45.0%
ATGAAATGATTCGCGTCTCG+GGG - chr8_3:65219592-65219611 Msa1302640:three_prime_UTR 45.0%
GCTGATCATTGTAGGGTGAA+TGG - chr8_3:65219795-65219814 Msa1302640:three_prime_UTR 45.0%
!! TGAGTCTTTGAAGCGTTTGG+AGG - chr8_3:65219827-65219846 Msa1302640:three_prime_UTR 45.0%
CGAGTAGGTATGCTTTGCTT+AGG - chr8_3:65220045-65220064 Msa1302640:intron 45.0%
GCTTAGGATCACTCCAGAAA+TGG - chr8_3:65220061-65220080 Msa1302640:intron 45.0%
CAGAAATGGAGACACAGTTG+CGG - chr8_3:65220075-65220094 Msa1302640:intron 45.0%
!! GGCATTTGATGTGGTTTGCT+AGG - chr8_3:65220135-65220154 Msa1302640:intron 45.0%
! GAATAATCTCGTTCGGTGGA+TGG + chr8_3:65220229-65220248 None:intergenic 45.0%
GACTGAATAATCTCGTTCGG+TGG + chr8_3:65220233-65220252 None:intergenic 45.0%
!! GTTCCTAGATGGGCTGTTAT+TGG - chr8_3:65220260-65220279 Msa1302640:intron 45.0%
CAACCAATAACAGCCCATCT+AGG + chr8_3:65220266-65220285 None:intergenic 45.0%
!! CTAGATGGGCTGTTATTGGT+TGG - chr8_3:65220264-65220283 Msa1302640:intron 45.0%
TGGCTGTTTAGTTGGGACTT+AGG - chr8_3:65220910-65220929 Msa1302640:intron 45.0%
TGTGTCACAGCAAGAGAAGA+AGG + chr8_3:65221220-65221239 None:intergenic 45.0%
!! TTTTCAGTACTGAGTCAGCC+AGG - chr8_3:65221847-65221866 Msa1302640:CDS 45.0%
! TTTCAGTACTGAGTCAGCCA+GGG - chr8_3:65221848-65221867 Msa1302640:CDS 45.0%
GGACAGTGTGAAAAAGAAGC+TGG - chr8_3:65221951-65221970 Msa1302640:CDS 45.0%
GTACAGAATTGCTCTTGCCT+TGG - chr8_3:65222009-65222028 Msa1302640:CDS 45.0%
! ATGAAGTGCTCCATGCCTAA+AGG - chr8_3:65222089-65222108 Msa1302640:CDS 45.0%
! TGTAACCGTGGGTTGAATAC+TGG - chr8_3:65222209-65222228 Msa1302640:CDS 45.0%
GGGAAAGTTAAGGACAGAAC+TGG - chr8_3:65222301-65222320 Msa1302640:CDS 45.0%
!! GGATAGGCCAGTTTTTGAAG+CGG - chr8_3:65222348-65222367 Msa1302640:CDS 45.0%
TGCACATCCGCTTCAAAAAC+TGG + chr8_3:65222358-65222377 None:intergenic 45.0%
GCTAAAGAGAGGGAAAAGTG+AGG - chr8_3:65222400-65222419 Msa1302640:CDS 45.0%
!! GAGGGAAAAGTGAGGTGTTT+TGG - chr8_3:65222408-65222427 Msa1302640:CDS 45.0%
!!! CTCCTGGTTTTGGTGATCAT+CGG - chr8_3:65222441-65222460 Msa1302640:CDS 45.0%
GCTTCAAGCATCTCTCAACA+GGG + chr8_3:65222523-65222542 None:intergenic 45.0%
TGCTTCAAGCATCTCTCAAC+AGG + chr8_3:65222524-65222543 None:intergenic 45.0%
TGAGAGATGCTTGAAGCAGA+TGG - chr8_3:65222526-65222545 Msa1302640:CDS 45.0%
CAGGTTCGGAACCATCATGA+TGG + chr8_3:65219259-65219278 None:intergenic 50.0%
!! AGCTTCATGAGGTGCTGTCA+GGG + chr8_3:65219283-65219302 None:intergenic 50.0%
GGCAAGGTTGAAGAGATTGG+AGG + chr8_3:65219338-65219357 None:intergenic 50.0%
GAAATGGGGTTGGGTGAGAA+TGG + chr8_3:65219433-65219452 None:intergenic 50.0%
!!! GGGTTTTGGAGAAATGGGGT+TGG + chr8_3:65219443-65219462 None:intergenic 50.0%
GGCGTAACCGTCTGTGATTA+TGG + chr8_3:65219484-65219503 None:intergenic 50.0%
ATTGAGGAGGAGGTTGAGGA+AGG + chr8_3:65219508-65219527 None:intergenic 50.0%
CGATATTGAGGAGGAGGTTG+AGG + chr8_3:65219512-65219531 None:intergenic 50.0%
!! AGAGGTGGTGGACGATATTG+AGG + chr8_3:65219524-65219543 None:intergenic 50.0%
AACCAAGGAGCTTAGGGTAG+AGG + chr8_3:65219542-65219561 None:intergenic 50.0%
CTACCCTAAGCTCCTTGGTT+CGG - chr8_3:65219542-65219561 Msa1302640:three_prime_UTR 50.0%
TCACCGAACCAAGGAGCTTA+GGG + chr8_3:65219548-65219567 None:intergenic 50.0%
TTCACCGAACCAAGGAGCTT+AGG + chr8_3:65219549-65219568 None:intergenic 50.0%
CGCAACTGTGTCTCCATTTC+TGG + chr8_3:65220077-65220096 None:intergenic 50.0%
TGTTGAGGCCAATGCCAAAC+TGG - chr8_3:65220316-65220335 Msa1302640:intron 50.0%
CAGCAAGAGAAGAAGGAGGA+GGG + chr8_3:65221213-65221232 None:intergenic 50.0%
ACAGCAAGAGAAGAAGGAGG+AGG + chr8_3:65221214-65221233 None:intergenic 50.0%
GTCACAGCAAGAGAAGAAGG+AGG + chr8_3:65221217-65221236 None:intergenic 50.0%
TCTTGATGCTTGGGCACCAA+TGG - chr8_3:65222270-65222289 Msa1302640:CDS 50.0%
CTTGATGCTTGGGCACCAAT+GGG - chr8_3:65222271-65222290 Msa1302640:CDS 50.0%
TTGATGCTTGGGCACCAATG+GGG - chr8_3:65222272-65222291 Msa1302640:CDS 50.0%
! ACTTTCCCTTTTGGCCCCAT+TGG + chr8_3:65222289-65222308 None:intergenic 50.0%
GGGGCCAAAAGGGAAAGTTA+AGG - chr8_3:65222291-65222310 Msa1302640:CDS 50.0%
CGATGATCACCAAAACCAGG+AGG + chr8_3:65222443-65222462 None:intergenic 50.0%
CACCGATGATCACCAAAACC+AGG + chr8_3:65222446-65222465 None:intergenic 50.0%
!!! CTGGTTTTGGTGATCATCGG+TGG - chr8_3:65222444-65222463 Msa1302640:CDS 50.0%
!! CAGCTTCATGAGGTGCTGTC+AGG + chr8_3:65219284-65219303 None:intergenic 55.0%
GAATGGCGTGAAGGATAGCG+TGG + chr8_3:65219416-65219435 None:intergenic 55.0%
GTTGGGTGAGAATGGCGTGA+AGG + chr8_3:65219425-65219444 None:intergenic 55.0%
GGTGGACGATATTGAGGAGG+AGG + chr8_3:65219518-65219537 None:intergenic 55.0%
!! GGTGGTGGACGATATTGAGG+AGG + chr8_3:65219521-65219540 None:intergenic 55.0%
CAAGGAGCTTAGGGTAGAGG+TGG + chr8_3:65219539-65219558 None:intergenic 55.0%
CACCTCTACCCTAAGCTCCT+TGG - chr8_3:65219537-65219556 Msa1302640:three_prime_UTR 55.0%
ATGATTCGCGTCTCGGGGAT+CGG - chr8_3:65219597-65219616 Msa1302640:three_prime_UTR 55.0%
! GCGCCACATGTTTTGTGCAG+TGG - chr8_3:65219747-65219766 Msa1302640:three_prime_UTR 55.0%
GAAGAAGGAGGAGGGTGATG+TGG + chr8_3:65221205-65221224 None:intergenic 55.0%
! GGTGCTGTCAGGGTCAGGTT+CGG + chr8_3:65219273-65219292 None:intergenic 60.0%
!! CATGAGGTGCTGTCAGGGTC+AGG + chr8_3:65219278-65219297 None:intergenic 60.0%
GAGGAGGAGGTTGAGGAAGG+TGG + chr8_3:65219505-65219524 None:intergenic 60.0%
GGAGCTTAGGGTAGAGGTGG+TGG + chr8_3:65219536-65219555 None:intergenic 60.0%
TGGGCACCAATGGGGCCAAA+AGG - chr8_3:65222280-65222299 Msa1302640:CDS 60.0%
GGGCACCAATGGGGCCAAAA+GGG - chr8_3:65222281-65222300 Msa1302640:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 65219211 65222605 65219211 ID=Msa1302640;Name=Msa1302640
chr8_3 mRNA 65219211 65222605 65219211 ID=Msa1302640-mRNA-1;Parent=Msa1302640;Name=Msa1302640-mRNA-1;_AED=0.02;_eAED=0.02;_QI=50|1|1|1|0|0.5|2|720|482
chr8_3 exon 65219211 65219962 65219211 ID=Msa1302640-mRNA-1:exon:19787;Parent=Msa1302640-mRNA-1
chr8_3 exon 65221139 65222605 65221139 ID=Msa1302640-mRNA-1:exon:19786;Parent=Msa1302640-mRNA-1
chr8_3 five_prime_UTR 65222556 65222605 65222556 ID=Msa1302640-mRNA-1:five_prime_utr;Parent=Msa1302640-mRNA-1
chr8_3 CDS 65221139 65222555 65221139 ID=Msa1302640-mRNA-1:cds;Parent=Msa1302640-mRNA-1
chr8_3 CDS 65219931 65219962 65219931 ID=Msa1302640-mRNA-1:cds;Parent=Msa1302640-mRNA-1
chr8_3 three_prime_UTR 65219211 65219930 65219211 ID=Msa1302640-mRNA-1:three_prime_utr;Parent=Msa1302640-mRNA-1
Gene Sequence

>Msa1302640

ATGATGGTTCCGAACCTGACCCTGACAGCACCTCATGAAGCTGAAAACCAAATCGAAATCTCTCTCAAACAATCCCTCCAATCTCTTCAACCTTGCCTTAAACCACCATTCTCCTTAACCATTCCAAATCCCGATGAATACATTCAACTCAACCACGCTATCCTTCACGCCATTCTCACCCAACCCCATTTCTCCAAAACCCATATCAAACACTTACACGCCATAATCACAGACGGTTACGCCACCTTCCTCAACCTCCTCCTCAATATCGTCCACCACCTCTACCCTAAGCTCCTTGGTTCGGTGAAACATCAACTTATTTGGGTCACCGATGAAATGATTCGCGTCTCGGGGATCGGCTATGATACTTTATTGATTTCCCTTTTGAGGCAAATTGTTGGTGGTGATTTCAGTGATGATAATTTATGGCTTTGTGAGAAAATGGTGACACTTTTATTGGATAAATGGGATTGTTTATTAGAAGAAGCGCCACATGTTTTGTGCAGTGGTTTGTATGTGTTTCTTCGAGTTTTGGCTGATCATTGTAGGGTGAATGGTGAAAAGTTTGAGTCTTTGAAGCGTTTGGAGGTTCATTTCTGTGTGAAGATAGTGAGGGAAGAGTTTCATTTATGTTTGAAAATTGGGAGGGATTTTATTCGGTTGTTGCAGGATTTGGTTCATGTTCCTGAATTTAAGTGTATATGGAAGGATTTAAAGCTGAACCCATCTAGTTTTAATACTTTAGGATTTAGTGGTGTTTCTCAGATTTATTTAACTAGGACTTCGAGTAGGTATGCTTTGCTTAGGATCACTCCAGAAATGGAGACACAGTTGCGGTTTTTGCTTACTCATGTGAAATTGGGGCATCAAAAGAGGCATTTGATGTGGTTTGCTAGGAAATTTTTGAACGAGCCTGATAAAGAGACTGTTGTAGTTGATATAGTTAGGTTTATATGCTGTGCACACCATCCACCGAACGAGATTATTCAGTCTGATATAGTTCCTAGATGGGCTGTTATTGGTTGGCTTTTGACAACTTTTAGGAAGAAGAGTTATGTTGAGGCCAATGCCAAACTGGCTTTGTTTTATGATTGGCTCTTTTTTGATGAAAAGGTTGTTAATATTATGAACATAGAACCTGCTATTTTGTTGATGGTGCATTCTATCACCCAATATGTGGAGATGACCAACACTCTTCTTGAGTTTTTGTTACTTCTTGTGGACAACTATGATATGGAACATAAGGATATCATTGTTAAAGGTGTCTCATTGGCTTTTCGATTTCTTGAAAGCAAAGGTGTGATTCAGTCGCTTGATATTTTGACTTCTTGTCCTACATTGTCCCCTTCACTAAAAGAGGGATTGAGTAGGCTATTATCATCTGGAAAGCCTGAAAGCTCTAAAGAATTTCTTCCAGTACTGAGTCAGCCAGGGCAACAAACTGTATAG

Protein sequence

>Msa1302640

MMVPNLTLTAPHEAENQIEISLKQSLQSLQPCLKPPFSLTIPNPDEYIQLNHAILHAILTQPHFSKTHIKHLHAIITDGYATFLNLLLNIVHHLYPKLLGSVKHQLIWVTDEMIRVSGIGYDTLLISLLRQIVGGDFSDDNLWLCEKMVTLLLDKWDCLLEEAPHVLCSGLYVFLRVLADHCRVNGEKFESLKRLEVHFCVKIVREEFHLCLKIGRDFIRLLQDLVHVPEFKCIWKDLKLNPSSFNTLGFSGVSQIYLTRTSSRYALLRITPEMETQLRFLLTHVKLGHQKRHLMWFARKFLNEPDKETVVVDIVRFICCAHHPPNEIIQSDIVPRWAVIGWLLTTFRKKSYVEANAKLALFYDWLFFDEKVVNIMNIEPAILLMVHSITQYVEMTNTLLEFLLLLVDNYDMEHKDIIVKGVSLAFRFLESKGVIQSLDILTSCPTLSPSLKEGLSRLLSSGKPESSKEFLPVLSQPGQQTV*