Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0446040 | XP_003598994.1 | 93.881 | 670 | 35 | 2 | 1 | 669 | 1 | 665 | 0.0 | 1263 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0446040 | G7IZA9 | 93.881 | 670 | 35 | 2 | 1 | 669 | 1 | 665 | 0.0 | 1263 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0446040 | 0.802599 | 5.197675e-49 | -8.615850e-47 |
| Msa0001460 | Msa0446040 | 0.809111 | 2.223366e-50 | -8.615850e-47 |
| Msa0005690 | Msa0446040 | 0.854037 | 1.606591e-61 | -8.615850e-47 |
| Msa0006700 | Msa0446040 | 0.808109 | 3.638927e-50 | -8.615850e-47 |
| Msa0008250 | Msa0446040 | 0.823511 | 1.331498e-53 | -8.615850e-47 |
| Msa0008850 | Msa0446040 | 0.808311 | 3.296387e-50 | -8.615850e-47 |
| Msa0020630 | Msa0446040 | 0.814942 | 1.191372e-51 | -8.615850e-47 |
| Msa0032450 | Msa0446040 | 0.801450 | 8.953065e-49 | -8.615850e-47 |
| Msa0040410 | Msa0446040 | 0.804065 | 2.583192e-49 | -8.615850e-47 |
| Msa0040550 | Msa0446040 | -0.815958 | 7.078434e-52 | -8.615850e-47 |
| Msa0046360 | Msa0446040 | 0.809228 | 2.099166e-50 | -8.615850e-47 |
| Msa0046410 | Msa0446040 | 0.810433 | 1.155605e-50 | -8.615850e-47 |
| Msa0046670 | Msa0446040 | 0.807844 | 4.145163e-50 | -8.615850e-47 |
| Msa0051600 | Msa0446040 | 0.822064 | 2.893455e-53 | -8.615850e-47 |
| Msa0053480 | Msa0446040 | 0.826584 | 2.504196e-54 | -8.615850e-47 |
| Msa0054760 | Msa0446040 | 0.816993 | 4.152275e-52 | -8.615850e-47 |
| Msa0057740 | Msa0446040 | 0.820220 | 7.696825e-53 | -8.615850e-47 |
| Msa0062750 | Msa0446040 | 0.837494 | 5.027496e-57 | -8.615850e-47 |
| Msa0068410 | Msa0446040 | 0.825068 | 5.732394e-54 | -8.615850e-47 |
| Msa0072710 | Msa0446040 | 0.808737 | 2.673807e-50 | -8.615850e-47 |
| Msa0072830 | Msa0446040 | 0.816912 | 4.329128e-52 | -8.615850e-47 |
| Msa0072860 | Msa0446040 | 0.816544 | 5.236119e-52 | -8.615850e-47 |
| Msa0083160 | Msa0446040 | 0.824858 | 6.428251e-54 | -8.615850e-47 |
| Msa0085130 | Msa0446040 | 0.802507 | 5.429385e-49 | -8.615850e-47 |
| Msa0094700 | Msa0446040 | 0.803107 | 4.082172e-49 | -8.615850e-47 |
| Msa0094990 | Msa0446040 | 0.807680 | 4.490375e-50 | -8.615850e-47 |
| Msa0096510 | Msa0446040 | 0.857809 | 1.267710e-62 | -8.615850e-47 |
| Msa0101060 | Msa0446040 | 0.804497 | 2.099444e-49 | -8.615850e-47 |
| Msa0103060 | Msa0446040 | 0.822962 | 1.788518e-53 | -8.615850e-47 |
| Msa0104360 | Msa0446040 | 0.829035 | 6.447973e-55 | -8.615850e-47 |
| Msa0116260 | Msa0446040 | 0.831175 | 1.937805e-55 | -8.615850e-47 |
| Msa0125530 | Msa0446040 | 0.805099 | 1.571944e-49 | -8.615850e-47 |
| Msa0127080 | Msa0446040 | 0.809667 | 1.689650e-50 | -8.615850e-47 |
| Msa0131390 | Msa0446040 | 0.818020 | 2.436762e-52 | -8.615850e-47 |
| Msa0137120 | Msa0446040 | -0.806989 | 6.291840e-50 | -8.615850e-47 |
| Msa0148430 | Msa0446040 | 0.811182 | 7.956955e-51 | -8.615850e-47 |
| Msa0149500 | Msa0446040 | 0.805654 | 1.202815e-49 | -8.615850e-47 |
| Msa0153640 | Msa0446040 | 0.850611 | 1.518354e-60 | -8.615850e-47 |
| Msa0159750 | Msa0446040 | 0.816257 | 6.071323e-52 | -8.615850e-47 |
| Msa0162030 | Msa0446040 | 0.835906 | 1.277365e-56 | -8.615850e-47 |
| Msa0162050 | Msa0446040 | 0.810372 | 1.190800e-50 | -8.615850e-47 |
| Msa0162070 | Msa0446040 | 0.834056 | 3.737361e-56 | -8.615850e-47 |
| Msa0164630 | Msa0446040 | 0.844001 | 9.902890e-59 | -8.615850e-47 |
| Msa0177490 | Msa0446040 | 0.817637 | 2.974350e-52 | -8.615850e-47 |
| Msa0181410 | Msa0446040 | 0.812615 | 3.877929e-51 | -8.615850e-47 |
| Msa0190980 | Msa0446040 | 0.834535 | 2.834119e-56 | -8.615850e-47 |
| Msa0194570 | Msa0446040 | 0.802006 | 6.884322e-49 | -8.615850e-47 |
| Msa0198440 | Msa0446040 | 0.801998 | 6.911046e-49 | -8.615850e-47 |
| Msa0199740 | Msa0446040 | 0.811097 | 8.300433e-51 | -8.615850e-47 |
| Msa0206600 | Msa0446040 | 0.828973 | 6.672937e-55 | -8.615850e-47 |
| Msa0213650 | Msa0446040 | 0.807906 | 4.020593e-50 | -8.615850e-47 |
| Msa0217470 | Msa0446040 | 0.812564 | 3.978969e-51 | -8.615850e-47 |
| Msa0226800 | Msa0446040 | 0.817786 | 2.751940e-52 | -8.615850e-47 |
| Msa0227490 | Msa0446040 | 0.819503 | 1.122409e-52 | -8.615850e-47 |
| Msa0227500 | Msa0446040 | 0.813003 | 3.189211e-51 | -8.615850e-47 |
| Msa0365870 | Msa0446040 | 0.846692 | 1.851971e-59 | -8.615850e-47 |
| Msa0367310 | Msa0446040 | 0.802361 | 5.819129e-49 | -8.615850e-47 |
| Msa0371610 | Msa0446040 | 0.811483 | 6.845727e-51 | -8.615850e-47 |
| Msa0372250 | Msa0446040 | 0.831389 | 1.716423e-55 | -8.615850e-47 |
| Msa0376900 | Msa0446040 | 0.805834 | 1.102265e-49 | -8.615850e-47 |
| Msa0377280 | Msa0446040 | 0.827642 | 1.397910e-54 | -8.615850e-47 |
| Msa0380430 | Msa0446040 | 0.823075 | 1.683565e-53 | -8.615850e-47 |
| Msa0387790 | Msa0446040 | 0.831867 | 1.308705e-55 | -8.615850e-47 |
| Msa0389060 | Msa0446040 | 0.831827 | 1.338739e-55 | -8.615850e-47 |
| Msa0393140 | Msa0446040 | 0.826631 | 2.439398e-54 | -8.615850e-47 |
| Msa0393470 | Msa0446040 | 0.814705 | 1.344678e-51 | -8.615850e-47 |
| Msa0396970 | Msa0446040 | 0.800355 | 1.498076e-48 | -8.615850e-47 |
| Msa0400900 | Msa0446040 | 0.805459 | 1.321098e-49 | -8.615850e-47 |
| Msa0401340 | Msa0446040 | 0.804467 | 2.130019e-49 | -8.615850e-47 |
| Msa0402640 | Msa0446040 | 0.825057 | 5.767300e-54 | -8.615850e-47 |
| Msa0404690 | Msa0446040 | 0.847498 | 1.113124e-59 | -8.615850e-47 |
| Msa0405040 | Msa0446040 | 0.802259 | 6.106894e-49 | -8.615850e-47 |
| Msa0413180 | Msa0446040 | 0.804038 | 2.616855e-49 | -8.615850e-47 |
| Msa0413740 | Msa0446040 | 0.836000 | 1.209018e-56 | -8.615850e-47 |
| Msa0414070 | Msa0446040 | 0.829290 | 5.593207e-55 | -8.615850e-47 |
| Msa0416000 | Msa0446040 | 0.828121 | 1.072098e-54 | -8.615850e-47 |
| Msa0423110 | Msa0446040 | 0.818442 | 1.956069e-52 | -8.615850e-47 |
| Msa0423600 | Msa0446040 | 0.815271 | 1.006735e-51 | -8.615850e-47 |
| Msa0438440 | Msa0446040 | 0.802163 | 6.389804e-49 | -8.615850e-47 |
| Msa0446040 | Msa0448120 | 0.808258 | 3.383886e-50 | -8.615850e-47 |
| Msa0446040 | Msa0458790 | 0.828541 | 8.491808e-55 | -8.615850e-47 |
| Msa0446040 | Msa0459120 | 0.818064 | 2.382443e-52 | -8.615850e-47 |
| Msa0446040 | Msa0462590 | 0.800210 | 1.603713e-48 | -8.615850e-47 |
| Msa0446040 | Msa0467920 | -0.801735 | 7.827172e-49 | -8.615850e-47 |
| Msa0446040 | Msa0469270 | 0.817179 | 3.771706e-52 | -8.615850e-47 |
| Msa0446040 | Msa0470650 | 0.800831 | 1.198576e-48 | -8.615850e-47 |
| Msa0446040 | Msa0471890 | 0.819012 | 1.452147e-52 | -8.615850e-47 |
| Msa0446040 | Msa0473490 | 0.805771 | 1.136672e-49 | -8.615850e-47 |
| Msa0446040 | Msa0475740 | 0.815922 | 7.211955e-52 | -8.615850e-47 |
| Msa0446040 | Msa0479230 | 0.805510 | 1.289349e-49 | -8.615850e-47 |
| Msa0446040 | Msa0488900 | 0.801829 | 7.486723e-49 | -8.615850e-47 |
| Msa0446040 | Msa0505390 | 0.835336 | 1.780901e-56 | -8.615850e-47 |
| Msa0446040 | Msa0505660 | 0.819961 | 8.820657e-53 | -8.615850e-47 |
| Msa0446040 | Msa0511890 | 0.806070 | 9.832563e-50 | -8.615850e-47 |
| Msa0446040 | Msa0512310 | 0.837240 | 5.842065e-57 | -8.615850e-47 |
| Msa0446040 | Msa0514330 | -0.813997 | 1.928180e-51 | -8.615850e-47 |
| Msa0446040 | Msa0524050 | 0.800487 | 1.408350e-48 | -8.615850e-47 |
| Msa0446040 | Msa0525800 | 0.808074 | 3.702577e-50 | -8.615850e-47 |
| Msa0446040 | Msa0530930 | 0.817950 | 2.528177e-52 | -8.615850e-47 |
| Msa0446040 | Msa0542040 | 0.806556 | 7.768172e-50 | -8.615850e-47 |
| Msa0446040 | Msa0545230 | 0.803972 | 2.700644e-49 | -8.615850e-47 |
| Msa0446040 | Msa0549740 | 0.802662 | 5.043532e-49 | -8.615850e-47 |
| Msa0446040 | Msa0550110 | 0.803956 | 2.721924e-49 | -8.615850e-47 |
| Msa0446040 | Msa0553520 | 0.820383 | 7.062447e-53 | -8.615850e-47 |
| Msa0446040 | Msa0555980 | 0.805012 | 1.638940e-49 | -8.615850e-47 |
| Msa0446040 | Msa0563140 | 0.800523 | 1.384650e-48 | -8.615850e-47 |
| Msa0446040 | Msa0566010 | 0.816197 | 6.260195e-52 | -8.615850e-47 |
| Msa0446040 | Msa0569290 | 0.816195 | 6.268105e-52 | -8.615850e-47 |
| Msa0446040 | Msa0569930 | 0.802692 | 4.973108e-49 | -8.615850e-47 |
| Msa0446040 | Msa0571250 | 0.801705 | 7.935978e-49 | -8.615850e-47 |
| Msa0446040 | Msa0573970 | 0.817180 | 3.769247e-52 | -8.615850e-47 |
| Msa0446040 | Msa0574170 | 0.810486 | 1.125292e-50 | -8.615850e-47 |
| Msa0446040 | Msa0576420 | 0.824295 | 8.722149e-54 | -8.615850e-47 |
| Msa0446040 | Msa0577230 | 0.810914 | 9.096540e-51 | -8.615850e-47 |
| Msa0446040 | Msa0582110 | 0.814123 | 1.808093e-51 | -8.615850e-47 |
| Msa0446040 | Msa0583930 | 0.815558 | 8.693947e-52 | -8.615850e-47 |
| Msa0446040 | Msa0587900 | 0.810249 | 1.266131e-50 | -8.615850e-47 |
| Msa0446040 | Msa0589290 | 0.804668 | 1.934488e-49 | -8.615850e-47 |
| Msa0446040 | Msa0595780 | 0.812035 | 5.192102e-51 | -8.615850e-47 |
| Msa0446040 | Msa0596100 | 0.807771 | 4.296053e-50 | -8.615850e-47 |
| Msa0446040 | Msa0600820 | 0.807009 | 6.232054e-50 | -8.615850e-47 |
| Msa0446040 | Msa0605620 | 0.823561 | 1.296551e-53 | -8.615850e-47 |
| Msa0446040 | Msa0606060 | 0.803108 | 4.080053e-49 | -8.615850e-47 |
| Msa0446040 | Msa0607280 | 0.818308 | 2.097962e-52 | -8.615850e-47 |
| Msa0446040 | Msa0607300 | 0.831020 | 2.114230e-55 | -8.615850e-47 |
| Msa0446040 | Msa0607440 | 0.831743 | 1.404197e-55 | -8.615850e-47 |
| Msa0446040 | Msa0618260 | 0.844549 | 7.059407e-59 | -8.615850e-47 |
| Msa0446040 | Msa0620640 | 0.806908 | 6.545646e-50 | -8.615850e-47 |
| Msa0446040 | Msa0621890 | 0.800835 | 1.195857e-48 | -8.615850e-47 |
| Msa0446040 | Msa0622250 | 0.810828 | 9.493234e-51 | -8.615850e-47 |
| Msa0446040 | Msa0622390 | 0.820128 | 8.078516e-53 | -8.615850e-47 |
| Msa0446040 | Msa0622690 | 0.800894 | 1.163377e-48 | -8.615850e-47 |
| Msa0446040 | Msa0624730 | 0.805000 | 1.648906e-49 | -8.615850e-47 |
| Msa0446040 | Msa0626890 | 0.825608 | 4.271667e-54 | -8.615850e-47 |
| Msa0446040 | Msa0631340 | 0.816010 | 6.893648e-52 | -8.615850e-47 |
| Msa0446040 | Msa0633720 | 0.801847 | 7.421011e-49 | -8.615850e-47 |
| Msa0446040 | Msa0635350 | 0.838822 | 2.287867e-57 | -8.615850e-47 |
| Msa0446040 | Msa0646390 | 0.804189 | 2.433779e-49 | -8.615850e-47 |
| Msa0446040 | Msa0647000 | 0.808525 | 2.967016e-50 | -8.615850e-47 |
| Msa0446040 | Msa0650360 | 0.807691 | 4.467479e-50 | -8.615850e-47 |
| Msa0446040 | Msa0657860 | 0.807687 | 4.475248e-50 | -8.615850e-47 |
| Msa0446040 | Msa0660880 | -0.807568 | 4.743933e-50 | -8.615850e-47 |
| Msa0446040 | Msa0668160 | 0.820531 | 6.528641e-53 | -8.615850e-47 |
| Msa0446040 | Msa0669990 | 0.806988 | 6.293703e-50 | -8.615850e-47 |
| Msa0446040 | Msa0672350 | 0.842965 | 1.872679e-58 | -8.615850e-47 |
| Msa0446040 | Msa0674300 | 0.806757 | 7.043206e-50 | -8.615850e-47 |
| Msa0446040 | Msa0678240 | 0.832772 | 7.809874e-56 | -8.615850e-47 |
| Msa0446040 | Msa0685880 | 0.802085 | 6.630534e-49 | -8.615850e-47 |
| Msa0446040 | Msa0690350 | 0.822658 | 2.105542e-53 | -8.615850e-47 |
| Msa0446040 | Msa0698650 | 0.809320 | 2.005388e-50 | -8.615850e-47 |
| Msa0446040 | Msa0707780 | 0.828236 | 1.006016e-54 | -8.615850e-47 |
| Msa0446040 | Msa0716740 | -0.810385 | 1.183654e-50 | -8.615850e-47 |
| Msa0446040 | Msa0718920 | 0.805762 | 1.141355e-49 | -8.615850e-47 |
| Msa0446040 | Msa0726610 | 0.808845 | 2.535583e-50 | -8.615850e-47 |
| Msa0446040 | Msa0727300 | 0.826327 | 2.882358e-54 | -8.615850e-47 |
| Msa0446040 | Msa0730180 | 0.809769 | 1.606480e-50 | -8.615850e-47 |
| Msa0446040 | Msa0734760 | 0.843279 | 1.544542e-58 | -8.615850e-47 |
| Msa0446040 | Msa0744690 | 0.809948 | 1.470252e-50 | -8.615850e-47 |
| Msa0446040 | Msa0747900 | 0.801655 | 8.126150e-49 | -8.615850e-47 |
| Msa0446040 | Msa0748330 | 0.811208 | 7.852565e-51 | -8.615850e-47 |
| Msa0446040 | Msa0748980 | 0.834200 | 3.439614e-56 | -8.615850e-47 |
| Msa0446040 | Msa0750380 | 0.813938 | 1.987012e-51 | -8.615850e-47 |
| Msa0446040 | Msa0756410 | 0.808158 | 3.552913e-50 | -8.615850e-47 |
| Msa0446040 | Msa0756480 | 0.835091 | 2.053446e-56 | -8.615850e-47 |
| Msa0446040 | Msa0757990 | -0.813529 | 2.443747e-51 | -8.615850e-47 |
| Msa0446040 | Msa0758330 | 0.805699 | 1.176861e-49 | -8.615850e-47 |
| Msa0446040 | Msa0766030 | 0.820778 | 5.729784e-53 | -8.615850e-47 |
| Msa0446040 | Msa0770430 | 0.820008 | 8.607722e-53 | -8.615850e-47 |
| Msa0446040 | Msa0773980 | 0.804138 | 2.493870e-49 | -8.615850e-47 |
| Msa0446040 | Msa0774560 | 0.813064 | 3.092523e-51 | -8.615850e-47 |
| Msa0446040 | Msa0775580 | 0.811237 | 7.741348e-51 | -8.615850e-47 |
| Msa0446040 | Msa0780140 | 0.806133 | 9.538798e-50 | -8.615850e-47 |
| Msa0446040 | Msa0781030 | 0.825291 | 5.078861e-54 | -8.615850e-47 |
| Msa0446040 | Msa0789800 | 0.803480 | 3.416381e-49 | -8.615850e-47 |
| Msa0446040 | Msa0791430 | 0.804830 | 1.788968e-49 | -8.615850e-47 |
| Msa0446040 | Msa0792170 | 0.802911 | 4.480495e-49 | -8.615850e-47 |
| Msa0446040 | Msa0792510 | 0.816870 | 4.423892e-52 | -8.615850e-47 |
| Msa0446040 | Msa0794460 | 0.809028 | 2.316395e-50 | -8.615850e-47 |
| Msa0446040 | Msa0799290 | -0.806301 | 8.789513e-50 | -8.615850e-47 |
| Msa0446040 | Msa0799710 | 0.806271 | 8.922077e-50 | -8.615850e-47 |
| Msa0446040 | Msa0800130 | 0.822121 | 2.806342e-53 | -8.615850e-47 |
| Msa0446040 | Msa0808420 | 0.805222 | 1.481399e-49 | -8.615850e-47 |
| Msa0446040 | Msa0811510 | 0.804463 | 2.134425e-49 | -8.615850e-47 |
| Msa0446040 | Msa0813630 | 0.816188 | 6.290992e-52 | -8.615850e-47 |
| Msa0446040 | Msa0814900 | 0.811382 | 7.199380e-51 | -8.615850e-47 |
| Msa0446040 | Msa0815950 | 0.800313 | 1.528401e-48 | -8.615850e-47 |
| Msa0446040 | Msa0824140 | 0.822221 | 2.659600e-53 | -8.615850e-47 |
| Msa0446040 | Msa0825520 | 0.820668 | 6.073506e-53 | -8.615850e-47 |
| Msa0446040 | Msa0828570 | 0.830992 | 2.148725e-55 | -8.615850e-47 |
| Msa0446040 | Msa0829430 | 0.806291 | 8.835283e-50 | -8.615850e-47 |
| Msa0446040 | Msa0830450 | 0.800013 | 1.758754e-48 | -8.615850e-47 |
| Msa0446040 | Msa0830720 | 0.815729 | 7.961664e-52 | -8.615850e-47 |
| Msa0446040 | Msa0835510 | 0.839761 | 1.306250e-57 | -8.615850e-47 |
| Msa0446040 | Msa0835550 | 0.800570 | 1.354868e-48 | -8.615850e-47 |
| Msa0446040 | Msa0836200 | 0.830761 | 2.447395e-55 | -8.615850e-47 |
| Msa0446040 | Msa0837510 | -0.807328 | 5.333753e-50 | -8.615850e-47 |
| Msa0446040 | Msa0837990 | 0.829520 | 4.917272e-55 | -8.615850e-47 |
| Msa0446040 | Msa0840630 | 0.826089 | 3.284909e-54 | -8.615850e-47 |
| Msa0446040 | Msa0847200 | 0.832213 | 1.074861e-55 | -8.615850e-47 |
| Msa0446040 | Msa0851740 | 0.815673 | 8.193893e-52 | -8.615850e-47 |
| Msa0446040 | Msa0861560 | 0.803790 | 2.946354e-49 | -8.615850e-47 |
| Msa0446040 | Msa0863250 | 0.830786 | 2.413354e-55 | -8.615850e-47 |
| Msa0446040 | Msa0864730 | 0.814641 | 1.389280e-51 | -8.615850e-47 |
| Msa0446040 | Msa0864750 | 0.814299 | 1.653565e-51 | -8.615850e-47 |
| Msa0446040 | Msa0868040 | 0.834275 | 3.292768e-56 | -8.615850e-47 |
| Msa0446040 | Msa0871470 | 0.814421 | 1.553688e-51 | -8.615850e-47 |
| Msa0446040 | Msa0883430 | 0.806844 | 6.751871e-50 | -8.615850e-47 |
| Msa0446040 | Msa0887000 | 0.845259 | 4.541638e-59 | -8.615850e-47 |
| Msa0446040 | Msa0888820 | 0.805932 | 1.051403e-49 | -8.615850e-47 |
| Msa0446040 | Msa0899700 | 0.816761 | 4.682291e-52 | -8.615850e-47 |
| Msa0446040 | Msa0904630 | 0.845015 | 5.284691e-59 | -8.615850e-47 |
| Msa0446040 | Msa0931730 | 0.805048 | 1.611352e-49 | -8.615850e-47 |
| Msa0446040 | Msa0936650 | 0.836524 | 8.895931e-57 | -8.615850e-47 |
| Msa0446040 | Msa0950410 | 0.830019 | 3.717414e-55 | -8.615850e-47 |
| Msa0446040 | Msa0964680 | 0.841717 | 4.011368e-58 | -8.615850e-47 |
| Msa0446040 | Msa0968780 | 0.826567 | 2.526813e-54 | -8.615850e-47 |
| Msa0446040 | Msa0970050 | 0.805849 | 1.094567e-49 | -8.615850e-47 |
| Msa0446040 | Msa0973130 | 0.800537 | 1.376080e-48 | -8.615850e-47 |
| Msa0446040 | Msa0973230 | 0.810752 | 9.861157e-51 | -8.615850e-47 |
| Msa0446040 | Msa0973890 | 0.806017 | 1.009065e-49 | -8.615850e-47 |
| Msa0446040 | Msa0981730 | 0.817990 | 2.474930e-52 | -8.615850e-47 |
| Msa0446040 | Msa0981740 | 0.807465 | 4.988837e-50 | -8.615850e-47 |
| Msa0446040 | Msa0984840 | 0.829706 | 4.430576e-55 | -8.615850e-47 |
| Msa0446040 | Msa0986620 | 0.816338 | 5.823565e-52 | -8.615850e-47 |
| Msa0446040 | Msa0988500 | 0.806465 | 8.118109e-50 | -8.615850e-47 |
| Msa0446040 | Msa1000470 | 0.818026 | 2.429911e-52 | -8.615850e-47 |
| Msa0446040 | Msa1001780 | 0.805664 | 1.196618e-49 | -8.615850e-47 |
| Msa0446040 | Msa1004210 | 0.807490 | 4.927077e-50 | -8.615850e-47 |
| Msa0446040 | Msa1004260 | 0.812392 | 4.338365e-51 | -8.615850e-47 |
| Msa0446040 | Msa1014350 | 0.815690 | 8.123988e-52 | -8.615850e-47 |
| Msa0446040 | Msa1016110 | 0.847945 | 8.384205e-60 | -8.615850e-47 |
| Msa0446040 | Msa1016670 | 0.808392 | 3.168261e-50 | -8.615850e-47 |
| Msa0446040 | Msa1028720 | 0.817891 | 2.606382e-52 | -8.615850e-47 |
| Msa0446040 | Msa1032350 | 0.805050 | 1.609832e-49 | -8.615850e-47 |
| Msa0446040 | Msa1033160 | 0.805863 | 1.086927e-49 | -8.615850e-47 |
| Msa0446040 | Msa1036390 | 0.826897 | 2.108535e-54 | -8.615850e-47 |
| Msa0446040 | Msa1046610 | 0.819350 | 1.216473e-52 | -8.615850e-47 |
| Msa0446040 | Msa1046890 | 0.814022 | 1.903340e-51 | -8.615850e-47 |
| Msa0446040 | Msa1049950 | 0.802025 | 6.821724e-49 | -8.615850e-47 |
| Msa0446040 | Msa1055360 | 0.829962 | 3.837290e-55 | -8.615850e-47 |
| Msa0446040 | Msa1067710 | 0.818713 | 1.697570e-52 | -8.615850e-47 |
| Msa0446040 | Msa1076680 | 0.828467 | 8.847191e-55 | -8.615850e-47 |
| Msa0446040 | Msa1077940 | -0.802385 | 5.753520e-49 | -8.615850e-47 |
| Msa0446040 | Msa1080460 | 0.806219 | 9.150135e-50 | -8.615850e-47 |
| Msa0446040 | Msa1080470 | 0.826457 | 2.684919e-54 | -8.615850e-47 |
| Msa0446040 | Msa1081700 | 0.835060 | 2.090729e-56 | -8.615850e-47 |
| Msa0446040 | Msa1081850 | 0.813620 | 2.333732e-51 | -8.615850e-47 |
| Msa0446040 | Msa1082150 | 0.803410 | 3.532262e-49 | -8.615850e-47 |
| Msa0446040 | Msa1085370 | 0.807251 | 5.537511e-50 | -8.615850e-47 |
| Msa0446040 | Msa1093390 | 0.838192 | 3.328381e-57 | -8.615850e-47 |
| Msa0446040 | Msa1096280 | 0.808207 | 3.469615e-50 | -8.615850e-47 |
| Msa0446040 | Msa1102170 | 0.814289 | 1.662138e-51 | -8.615850e-47 |
| Msa0446040 | Msa1102540 | 0.804769 | 1.842664e-49 | -8.615850e-47 |
| Msa0446040 | Msa1108500 | 0.810722 | 1.000991e-50 | -8.615850e-47 |
| Msa0446040 | Msa1113210 | 0.819265 | 1.271735e-52 | -8.615850e-47 |
| Msa0446040 | Msa1118140 | 0.809660 | 1.695230e-50 | -8.615850e-47 |
| Msa0446040 | Msa1123980 | -0.802356 | 5.832066e-49 | -8.615850e-47 |
| Msa0446040 | Msa1130650 | 0.847642 | 1.016393e-59 | -8.615850e-47 |
| Msa0446040 | Msa1130730 | 0.844972 | 5.426559e-59 | -8.615850e-47 |
| Msa0446040 | Msa1140010 | 0.817922 | 2.565284e-52 | -8.615850e-47 |
| Msa0446040 | Msa1149760 | 0.801567 | 8.471829e-49 | -8.615850e-47 |
| Msa0446040 | Msa1161160 | 0.805006 | 1.643666e-49 | -8.615850e-47 |
| Msa0446040 | Msa1161520 | 0.817292 | 3.556748e-52 | -8.615850e-47 |
| Msa0446040 | Msa1167000 | 0.816819 | 4.544057e-52 | -8.615850e-47 |
| Msa0446040 | Msa1182400 | 0.825169 | 5.427957e-54 | -8.615850e-47 |
| Msa0446040 | Msa1182800 | 0.811795 | 5.854549e-51 | -8.615850e-47 |
| Msa0446040 | Msa1182830 | 0.842701 | 2.202042e-58 | -8.615850e-47 |
| Msa0446040 | Msa1183730 | 0.803005 | 4.285353e-49 | -8.615850e-47 |
| Msa0446040 | Msa1184580 | 0.800827 | 1.200801e-48 | -8.615850e-47 |
| Msa0446040 | Msa1191390 | 0.819515 | 1.115566e-52 | -8.615850e-47 |
| Msa0446040 | Msa1196600 | 0.817571 | 3.078364e-52 | -8.615850e-47 |
| Msa0446040 | Msa1208250 | 0.818992 | 1.467314e-52 | -8.615850e-47 |
| Msa0446040 | Msa1209790 | 0.855167 | 7.567517e-62 | -8.615850e-47 |
| Msa0446040 | Msa1209800 | 0.819965 | 8.803376e-53 | -8.615850e-47 |
| Msa0446040 | Msa1212740 | 0.822530 | 2.255244e-53 | -8.615850e-47 |
| Msa0446040 | Msa1212960 | 0.807877 | 4.077926e-50 | -8.615850e-47 |
| Msa0446040 | Msa1214900 | 0.809986 | 1.442345e-50 | -8.615850e-47 |
| Msa0446040 | Msa1219780 | -0.808019 | 3.804527e-50 | -8.615850e-47 |
| Msa0446040 | Msa1221540 | 0.810649 | 1.037625e-50 | -8.615850e-47 |
| Msa0446040 | Msa1222030 | -0.801097 | 1.057190e-48 | -8.615850e-47 |
| Msa0446040 | Msa1226600 | 0.850247 | 1.921279e-60 | -8.615850e-47 |
| Msa0446040 | Msa1228280 | 0.800311 | 1.529639e-48 | -8.615850e-47 |
| Msa0446040 | Msa1228330 | 0.804694 | 1.910030e-49 | -8.615850e-47 |
| Msa0446040 | Msa1230190 | 0.813948 | 1.976243e-51 | -8.615850e-47 |
| Msa0446040 | Msa1233770 | 0.840908 | 6.549455e-58 | -8.615850e-47 |
| Msa0446040 | Msa1237260 | 0.827440 | 1.562688e-54 | -8.615850e-47 |
| Msa0446040 | Msa1238480 | 0.800066 | 1.715536e-48 | -8.615850e-47 |
| Msa0446040 | Msa1258100 | 0.806174 | 9.351700e-50 | -8.615850e-47 |
| Msa0446040 | Msa1258280 | 0.813602 | 2.355128e-51 | -8.615850e-47 |
| Msa0446040 | Msa1268370 | 0.821020 | 5.041123e-53 | -8.615850e-47 |
| Msa0446040 | Msa1272950 | 0.807793 | 4.248277e-50 | -8.615850e-47 |
| Msa0446040 | Msa1276080 | 0.846265 | 2.421604e-59 | -8.615850e-47 |
| Msa0446040 | Msa1278420 | 0.819851 | 9.346278e-53 | -8.615850e-47 |
| Msa0446040 | Msa1279330 | 0.801851 | 7.409991e-49 | -8.615850e-47 |
| Msa0446040 | Msa1279860 | 0.821726 | 3.464462e-53 | -8.615850e-47 |
| Msa0446040 | Msa1279870 | 0.817156 | 3.816711e-52 | -8.615850e-47 |
| Msa0446040 | Msa1287690 | 0.818972 | 1.482439e-52 | -8.615850e-47 |
| Msa0446040 | Msa1299940 | 0.800208 | 1.605133e-48 | -8.615850e-47 |
| Msa0446040 | Msa1300880 | 0.802140 | 6.462598e-49 | -8.615850e-47 |
| Msa0446040 | Msa1317710 | 0.826073 | 3.313221e-54 | -8.615850e-47 |
| Msa0446040 | Msa1319440 | 0.814485 | 1.503878e-51 | -8.615850e-47 |
| Msa0446040 | Msa1325980 | 0.804927 | 1.708026e-49 | -8.615850e-47 |
| Msa0446040 | Msa1326000 | 0.846251 | 2.441703e-59 | -8.615850e-47 |
| Msa0446040 | Msa1334020 | 0.814074 | 1.854011e-51 | -8.615850e-47 |
| Msa0446040 | Msa1338180 | 0.816512 | 5.323369e-52 | -8.615850e-47 |
| Msa0446040 | Msa1342080 | 0.803958 | 2.718964e-49 | -8.615850e-47 |
| Msa0446040 | Msa1349360 | 0.836472 | 9.174890e-57 | -8.615850e-47 |
| Msa0446040 | Msa1349640 | 0.834937 | 2.245274e-56 | -8.615850e-47 |
| Msa0446040 | Msa1349810 | 0.803366 | 3.607870e-49 | -8.615850e-47 |
| Msa0446040 | Msa1351370 | 0.808028 | 3.786861e-50 | -8.615850e-47 |
| Msa0446040 | Msa1352290 | 0.809391 | 1.937000e-50 | -8.615850e-47 |
| Msa0446040 | Msa1352820 | 0.816401 | 5.635391e-52 | -8.615850e-47 |
| Msa0446040 | Msa1356730 | 0.812050 | 5.151701e-51 | -8.615850e-47 |
| Msa0446040 | Msa1357380 | 0.817193 | 3.743729e-52 | -8.615850e-47 |
| Msa0446040 | Msa1358340 | 0.806031 | 1.001944e-49 | -8.615850e-47 |
| Msa0446040 | Msa1366700 | 0.837652 | 4.582087e-57 | -8.615850e-47 |
| Msa0446040 | Msa1368730 | 0.801959 | 7.037907e-49 | -8.615850e-47 |
| Msa0446040 | Msa1369900 | 0.802637 | 5.105047e-49 | -8.615850e-47 |
| Msa0446040 | Msa1371840 | 0.806373 | 8.488582e-50 | -8.615850e-47 |
| Msa0446040 | Msa1373950 | 0.823994 | 1.026243e-53 | -8.615850e-47 |
| Msa0446040 | Msa1384620 | 0.821093 | 4.850568e-53 | -8.615850e-47 |
| Msa0446040 | Msa1384980 | 0.848280 | 6.776062e-60 | -8.615850e-47 |
| Msa0446040 | Msa1386020 | 0.835523 | 1.597385e-56 | -8.615850e-47 |
| Msa0446040 | Msa1395640 | 0.818696 | 1.713286e-52 | -8.615850e-47 |
| Msa0446040 | Msa1397110 | 0.825312 | 5.021499e-54 | -8.615850e-47 |
| Msa0446040 | Msa1397540 | 0.860064 | 2.680425e-63 | -8.615850e-47 |
| Msa0446040 | Msa1400700 | -0.801104 | 1.053748e-48 | -8.615850e-47 |
| Msa0446040 | Msa1403900 | 0.828452 | 8.922760e-55 | -8.615850e-47 |
| Msa0446040 | Msa1407210 | -0.809533 | 1.805736e-50 | -8.615850e-47 |
| Msa0446040 | Msa1408190 | 0.845963 | 2.925184e-59 | -8.615850e-47 |
| Msa0446040 | Msa1412520 | 0.809915 | 1.494671e-50 | -8.615850e-47 |
| Msa0446040 | Msa1418200 | 0.814931 | 1.198386e-51 | -8.615850e-47 |
| Msa0446040 | Msa1423660 | -0.830561 | 2.739965e-55 | -8.615850e-47 |
| Msa0446040 | Msa1428420 | 0.805364 | 1.383736e-49 | -8.615850e-47 |
| Msa0446040 | Msa1431240 | 0.853826 | 1.848689e-61 | -8.615850e-47 |
| Msa0446040 | Msa1432250 | 0.811090 | 8.330672e-51 | -8.615850e-47 |
| Msa0446040 | Msa1435470 | 0.801189 | 1.012391e-48 | -8.615850e-47 |
| Msa0446040 | Msa1435910 | 0.829984 | 3.791429e-55 | -8.615850e-47 |
| Msa0446040 | Msa1447160 | -0.810739 | 9.922560e-51 | -8.615850e-47 |
| Msa0446040 | Msa1448990 | 0.846040 | 2.787806e-59 | -8.615850e-47 |
| Msa0446040 | Msa1450420 | 0.821612 | 3.680731e-53 | -8.615850e-47 |
| Msa0446040 | Msa1451780 | 0.826428 | 2.727183e-54 | -8.615850e-47 |
| Msa0446040 | Msa1456810 | 0.801544 | 8.565285e-49 | -8.615850e-47 |
| Msa0446040 | Msa1460310 | -0.844586 | 6.895804e-59 | -8.615850e-47 |
| Msa0446040 | Msa1463500 | 0.808227 | 3.435401e-50 | -8.615850e-47 |
| Msa0242290 | Msa0446040 | 0.813997 | 1.927739e-51 | -8.615850e-47 |
| Msa0251140 | Msa0446040 | 0.843312 | 1.514327e-58 | -8.615850e-47 |
| Msa0258380 | Msa0446040 | 0.814883 | 1.228034e-51 | -8.615850e-47 |
| Msa0264940 | Msa0446040 | -0.843525 | 1.327910e-58 | -8.615850e-47 |
| Msa0272420 | Msa0446040 | 0.835377 | 1.738435e-56 | -8.615850e-47 |
| Msa0282860 | Msa0446040 | 0.815564 | 8.666364e-52 | -8.615850e-47 |
| Msa0292150 | Msa0446040 | 0.819104 | 1.383417e-52 | -8.615850e-47 |
| Msa0302990 | Msa0446040 | -0.844483 | 7.351514e-59 | -8.615850e-47 |
| Msa0304870 | Msa0446040 | 0.810087 | 1.372321e-50 | -8.615850e-47 |
| Msa0312570 | Msa0446040 | 0.824792 | 6.662361e-54 | -8.615850e-47 |
| Msa0312780 | Msa0446040 | 0.813354 | 2.670644e-51 | -8.615850e-47 |
| Msa0314790 | Msa0446040 | 0.807374 | 5.216010e-50 | -8.615850e-47 |
| Msa0320540 | Msa0446040 | 0.810700 | 1.011542e-50 | -8.615850e-47 |
| Msa0321230 | Msa0446040 | 0.825023 | 5.877174e-54 | -8.615850e-47 |
| Msa0327900 | Msa0446040 | 0.800616 | 1.325784e-48 | -8.615850e-47 |
| Msa0334980 | Msa0446040 | 0.808051 | 3.745249e-50 | -8.615850e-47 |
| Msa0336270 | Msa0446040 | 0.818630 | 1.772928e-52 | -8.615850e-47 |
| Msa0341260 | Msa0446040 | 0.807262 | 5.506972e-50 | -8.615850e-47 |
| Msa0344070 | Msa0446040 | 0.806851 | 6.730234e-50 | -8.615850e-47 |
| Msa0350020 | Msa0446040 | 0.813511 | 2.467127e-51 | -8.615850e-47 |
| Msa0352200 | Msa0446040 | 0.808124 | 3.613198e-50 | -8.615850e-47 |
| Msa0357380 | Msa0446040 | 0.809012 | 2.335281e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0446040 | MtrunA17_Chr3g0086851 | 93.881 | 670 | 35 | 2 | 1 | 669 | 1 | 665 | 0.0 | 1263 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0446040 | AT5G61040.1 | 31.667 | 720 | 305 | 24 | 1 | 666 | 1 | 587 | 4.33e-71 | 242 |
| Msa0446040 | AT5G08010.1 | 29.370 | 698 | 322 | 18 | 1 | 664 | 1 | 561 | 3.81e-55 | 198 |
Find 144 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATTTAAAGATCCAATTT+TGG | 0.143154 | 3_3:-21223004 | None:intergenic |
| TGCATAAAGTTTCATCTTCT+TGG | 0.150495 | 3_3:-21223028 | None:intergenic |
| TTGAAGGGGTTTGATTTAAT+TGG | 0.188405 | 3_3:+21221845 | Msa0446040:five_prime_UTR |
| GTTCCTTCCTTGCCCAAAAT+TGG | 0.190143 | 3_3:+21222991 | Msa0446040:CDS |
| AAAGACATATTCTTCCATTT+TGG | 0.197205 | 3_3:-21222806 | None:intergenic |
| GCCTGATAGATTGAGAATTA+AGG | 0.220321 | 3_3:-21225780 | None:intergenic |
| CAACTTTCTAAGGAATTTAA+TGG | 0.229860 | 3_3:-21222754 | None:intergenic |
| GGGTTGTTTGCGGGAGGTTA+AGG | 0.240369 | 3_3:-21222356 | None:intergenic |
| TTCAGTCTTGGGATTTCTCT+TGG | 0.270448 | 3_3:+21224316 | Msa0446040:CDS |
| GGTTGTTTGCGGGAGGTTAA+GGG | 0.271702 | 3_3:-21222355 | None:intergenic |
| CAAAGAATCATATGATAAAA+AGG | 0.284476 | 3_3:+21224582 | Msa0446040:CDS |
| TTCCTTAGAAAGTTGTTTCA+TGG | 0.286371 | 3_3:+21222762 | Msa0446040:CDS |
| CATATTTATTAATTCTTCAT+AGG | 0.286635 | 3_3:-21225828 | None:intergenic |
| GAGCAAAATACGAGTAGTTT+TGG | 0.297577 | 3_3:+21222619 | Msa0446040:CDS |
| CGGCGTTTCTCTTCAGTCTT+GGG | 0.311500 | 3_3:+21224305 | Msa0446040:CDS |
| CCTGATAGATTGAGAATTAA+GGG | 0.312463 | 3_3:-21225779 | None:intergenic |
| ACGTCTCCGGGGTTGTTTGC+GGG | 0.313131 | 3_3:-21222365 | None:intergenic |
| AAGCAGAACTTGAGAGATTA+GGG | 0.317709 | 3_3:+21224650 | Msa0446040:CDS |
| TTATCATCATATGGTGATAA+TGG | 0.327912 | 3_3:-21222571 | None:intergenic |
| GAGTTACAAAATGAAAATTA+TGG | 0.330169 | 3_3:+21224466 | Msa0446040:CDS |
| CTGGTTATTTAGCTAAATAT+TGG | 0.333394 | 3_3:+21222248 | Msa0446040:CDS |
| CCGGCGTTTCTCTTCAGTCT+TGG | 0.340040 | 3_3:+21224304 | Msa0446040:CDS |
| CCAGATGAAAGTAAAGTCTT+TGG | 0.340166 | 3_3:+21225664 | Msa0446040:CDS |
| GTAACTTGTAGTGTAGAGTT+TGG | 0.343519 | 3_3:+21221974 | Msa0446040:five_prime_UTR |
| AGCCATGAAACAACTTTCTA+AGG | 0.343642 | 3_3:-21222764 | None:intergenic |
| AACAAACTGTTGTCAATTAC+CGG | 0.344618 | 3_3:+21222084 | Msa0446040:five_prime_UTR |
| CCCTTAATTCTCAATCTATC+AGG | 0.348267 | 3_3:+21225779 | Msa0446040:CDS |
| ATGAAACTTTATGCAGTTGA+TGG | 0.355903 | 3_3:+21223036 | Msa0446040:CDS |
| CCAAAGACTTTACTTTCATC+TGG | 0.358080 | 3_3:-21225664 | None:intergenic |
| CGAAATAACCTTGTTGTAGA+TGG | 0.359330 | 3_3:-21222844 | None:intergenic |
| AAGGTCCGCTTTCACATGAT+TGG | 0.363169 | 3_3:+21225906 | Msa0446040:CDS |
| TAGTGGGAGAAGATTCCTTT+TGG | 0.364922 | 3_3:-21225709 | None:intergenic |
| AAGTTCTTCTCTTGGTTGCT+TGG | 0.371242 | 3_3:+21221928 | Msa0446040:five_prime_UTR |
| AAAGAAGATATTGTATTCTA+TGG | 0.373072 | 3_3:+21226102 | Msa0446040:CDS |
| TAATTGGCTAAATATATGTT+TGG | 0.376448 | 3_3:+21221861 | Msa0446040:five_prime_UTR |
| TCCTTGGATGGTCCTTCAAC+AGG | 0.378617 | 3_3:+21222451 | Msa0446040:CDS |
| ATGTAGCTCCTTACCATTGA+AGG | 0.383984 | 3_3:-21224512 | None:intergenic |
| GAAGCAGAACTTGAGAGATT+AGG | 0.386686 | 3_3:+21224649 | Msa0446040:CDS |
| ATATAAAGAGCATGCCAAAA+TGG | 0.389469 | 3_3:+21222792 | Msa0446040:CDS |
| AGTGGAAAACTCACTCAATA+TGG | 0.390330 | 3_3:+21223096 | Msa0446040:CDS |
| TTCATGGAAAGTTCTTCTCT+TGG | 0.392527 | 3_3:+21221920 | Msa0446040:five_prime_UTR |
| TCAGTCTTGGGATTTCTCTT+GGG | 0.395373 | 3_3:+21224317 | Msa0446040:CDS |
| TGATTCTTTGCATTCTACTC+TGG | 0.395507 | 3_3:-21224569 | None:intergenic |
| TTGTCATATAGCGGCTTTAG+TGG | 0.422248 | 3_3:+21222008 | Msa0446040:five_prime_UTR |
| CATGGAAGTGATTTAATTGA+AGG | 0.425707 | 3_3:+21221884 | Msa0446040:five_prime_UTR |
| AAAACGTTTCGTCGAGAGAA+AGG | 0.426986 | 3_3:-21222713 | None:intergenic |
| ATTTCGTTTCACGGATACTA+AGG | 0.428464 | 3_3:+21221222 | Msa0446040:five_prime_UTR |
| GGAGATGTGGCTTCTTATAG+AGG | 0.432304 | 3_3:+21222472 | Msa0446040:CDS |
| ATCAAAATCTACTCTTCAAA+TGG | 0.433789 | 3_3:-21221807 | None:intergenic |
| TCCTTAAAATTATCATCATA+TGG | 0.439015 | 3_3:-21222580 | None:intergenic |
| CACGTCTCCGGGGTTGTTTG+CGG | 0.439128 | 3_3:-21222366 | None:intergenic |
| GTTGTTTGCGGGAGGTTAAG+GGG | 0.443607 | 3_3:-21222354 | None:intergenic |
| CAGTGCATTGACTGGAAGTA+AGG | 0.443744 | 3_3:+21222915 | Msa0446040:CDS |
| TCTAGTGAATTGAATGTTAG+TGG | 0.446663 | 3_3:+21225980 | Msa0446040:CDS |
| CTCTGAAGACAAATGATAAG+AGG | 0.447999 | 3_3:-21222296 | None:intergenic |
| CGCTGTAGTACTGTAGCATA+GGG | 0.451155 | 3_3:+21222116 | Msa0446040:five_prime_UTR |
| GATTCTTTGCATTCTACTCT+GGG | 0.455473 | 3_3:-21224568 | None:intergenic |
| ACGATTGACAACAGAGTTAG+TGG | 0.455792 | 3_3:+21222171 | Msa0446040:five_prime_UTR |
| GTATCCGTGAAACGAAATCT+AGG | 0.457226 | 3_3:-21221217 | None:intergenic |
| TTTCGAGCTGACACGGTCAA+TGG | 0.462204 | 3_3:+21225503 | Msa0446040:CDS |
| CAACCCCGGAGACGTGAAAA+GGG | 0.464778 | 3_3:+21222373 | Msa0446040:CDS |
| ATTGTTGAAAGAACCAAGAA+AGG | 0.468316 | 3_3:+21226058 | Msa0446040:CDS |
| ATTCTCTGATGCGAGTTCCT+TGG | 0.470313 | 3_3:+21222435 | Msa0446040:CDS |
| GAAGCCACATCTCCTGTTGA+AGG | 0.474798 | 3_3:-21222463 | None:intergenic |
| ACAACCCCGGAGACGTGAAA+AGG | 0.475375 | 3_3:+21222372 | Msa0446040:CDS |
| CCTTCACTCGTGTTTCGAGT+TGG | 0.476018 | 3_3:-21225616 | None:intergenic |
| GCAAAATCTGCTACGAACTC+CGG | 0.482413 | 3_3:-21225470 | None:intergenic |
| TGTTGATAATTGAAAGAAAG+AGG | 0.484934 | 3_3:+21221951 | Msa0446040:five_prime_UTR |
| ACATGTGATCATTCCTTCAA+TGG | 0.489917 | 3_3:+21224499 | Msa0446040:CDS |
| CTCTTATCATTTGTCTTCAG+AGG | 0.490889 | 3_3:+21222297 | Msa0446040:CDS |
| GTATCCTAGATTTCGTTTCA+CGG | 0.493854 | 3_3:+21221213 | Msa0446040:five_prime_UTR |
| TAATGGTCTACTAACATGCT+CGG | 0.495493 | 3_3:-21222737 | None:intergenic |
| CATCATTAAGTTTCCTCTAG+TGG | 0.497429 | 3_3:-21225726 | None:intergenic |
| TAGATTGAGAATTAAGGGTT+GGG | 0.498887 | 3_3:-21225774 | None:intergenic |
| GGAGGTTAAGGGGCTGCTAA+AGG | 0.506632 | 3_3:-21222344 | None:intergenic |
| ATCATTAAGTTTCCTCTAGT+GGG | 0.508525 | 3_3:-21225725 | None:intergenic |
| TACTACAGCGCTTCTATAGC+CGG | 0.511680 | 3_3:-21222103 | None:intergenic |
| GGCTGATGGTGAATTGTCTT+CGG | 0.512782 | 3_3:-21225858 | None:intergenic |
| CAAAATCTGCTACGAACTCC+GGG | 0.513340 | 3_3:-21225469 | None:intergenic |
| GTTGAAGCAGAATGAGAACT+TGG | 0.515778 | 3_3:+21224393 | Msa0446040:CDS |
| AATGGTCTACTAACATGCTC+GGG | 0.515836 | 3_3:-21222736 | None:intergenic |
| ACATGATGTTAGTTTCCAAA+AGG | 0.517230 | 3_3:+21225694 | Msa0446040:CDS |
| AGGTGGAGAGGCTATTGATA+AGG | 0.520272 | 3_3:+21226032 | Msa0446040:CDS |
| GCGCTGTAGTACTGTAGCAT+AGG | 0.521542 | 3_3:+21222115 | Msa0446040:five_prime_UTR |
| ATGTGGCGAAACTGCATAGT+TGG | 0.523188 | 3_3:-21225558 | None:intergenic |
| TGATTGTGATAATGAGGAGG+TGG | 0.524196 | 3_3:+21226015 | Msa0446040:CDS |
| AAATTTACATCATGCTTGCA+AGG | 0.525257 | 3_3:+21226225 | Msa0446040:three_prime_UTR |
| GGACATGAATGCGTCAAGCT+TGG | 0.526999 | 3_3:+21224675 | Msa0446040:CDS |
| ATACGATTTCGCGACAATGT+TGG | 0.527511 | 3_3:+21225946 | Msa0446040:CDS |
| TGATCATTCCTTCAATGGTA+AGG | 0.528000 | 3_3:+21224504 | Msa0446040:CDS |
| GATTATAAGCTGCATAAAGC+TGG | 0.528729 | 3_3:+21222937 | Msa0446040:CDS |
| TGGTTAGAGTGGTGAATTGA+AGG | 0.530209 | 3_3:+21221829 | Msa0446040:five_prime_UTR |
| ACTGCATAGTTGGCAGGAAG+AGG | 0.537017 | 3_3:-21225548 | None:intergenic |
| ATAGATTGAGAATTAAGGGT+TGG | 0.537246 | 3_3:-21225775 | None:intergenic |
| GGCGAAACTGCATAGTTGGC+AGG | 0.537556 | 3_3:-21225554 | None:intergenic |
| TCCTGTTGAAGGACCATCCA+AGG | 0.540053 | 3_3:-21222452 | None:intergenic |
| CACGAAGTATTGTCGAATCT+CGG | 0.540599 | 3_3:-21221191 | None:intergenic |
| GGCTAAATATATGTTTGGCA+TGG | 0.543529 | 3_3:+21221866 | Msa0446040:five_prime_UTR |
| GTGATAATGAGGAGGTGGAG+AGG | 0.550099 | 3_3:+21226020 | Msa0446040:CDS |
| AGTTTGATCAGTGCATTGAC+TGG | 0.553765 | 3_3:+21222907 | Msa0446040:CDS |
| ATGGAAGTGATTTAATTGAA+GGG | 0.553905 | 3_3:+21221885 | Msa0446040:five_prime_UTR |
| GTTGATAATTGAAAGAAAGA+GGG | 0.564530 | 3_3:+21221952 | Msa0446040:five_prime_UTR |
| ATCACTTTGGCAGAAAACTC+AGG | 0.564823 | 3_3:-21222661 | None:intergenic |
| TGAATGCGTCAAGCTTGGAC+AGG | 0.568851 | 3_3:+21224680 | Msa0446040:CDS |
| CAGACAAACATTGAAGATAA+CGG | 0.571610 | 3_3:+21221153 | Msa0446040:five_prime_UTR |
| GTCGTCACTATCATGAATGA+TGG | 0.571660 | 3_3:-21225879 | None:intergenic |
| TCTGATGCGAGTTCCTTGGA+TGG | 0.576753 | 3_3:+21222439 | Msa0446040:CDS |
| AGAACTTGAGAGATTAGGGT+TGG | 0.577115 | 3_3:+21224654 | Msa0446040:CDS |
| TGGTCCTTCAACAGGAGATG+TGG | 0.577559 | 3_3:+21222459 | Msa0446040:CDS |
| GTTAGAGTGGTGAATTGAAG+GGG | 0.580565 | 3_3:+21221831 | Msa0446040:five_prime_UTR |
| AGGTTATTTCGTGTTAGCAA+TGG | 0.581371 | 3_3:+21222856 | Msa0446040:CDS |
| CATGATAGTGACGACAAAGA+AGG | 0.582628 | 3_3:+21225887 | Msa0446040:CDS |
| TATGCTTACCTCAACAAGCT+CGG | 0.589234 | 3_3:-21224710 | None:intergenic |
| AGGTGAGTTTCGAGCTGACA+CGG | 0.589383 | 3_3:+21225496 | Msa0446040:CDS |
| GAAATTATCCGAGCTTGTTG+AGG | 0.590101 | 3_3:+21224702 | Msa0446040:CDS |
| ATTTGTGACTGAAAGAGTTG+TGG | 0.592254 | 3_3:-21222690 | None:intergenic |
| ACTAACTCTGTTGTCAATCG+TGG | 0.595148 | 3_3:-21222169 | None:intergenic |
| CCAACTCGAAACACGAGTGA+AGG | 0.597034 | 3_3:+21225616 | Msa0446040:CDS |
| AAGGAATCTTCTCCCACTAG+AGG | 0.603884 | 3_3:+21225713 | Msa0446040:CDS |
| GATTTCGCGACAATGTTGGA+AGG | 0.608266 | 3_3:+21225950 | Msa0446040:CDS |
| GTTGTGGATAGGAATCACTT+TGG | 0.608512 | 3_3:-21222674 | None:intergenic |
| TAAGGGGCTGCTAAAGGACT+CGG | 0.611733 | 3_3:-21222338 | None:intergenic |
| GCATTCCAATCATGTGAAAG+CGG | 0.615925 | 3_3:-21225911 | None:intergenic |
| TAACCTCCCGCAAACAACCC+CGG | 0.618799 | 3_3:+21222359 | Msa0446040:CDS |
| GTTGTAGATGGTGATGAAAG+AGG | 0.619822 | 3_3:-21222832 | None:intergenic |
| GGTTAGAGTGGTGAATTGAA+GGG | 0.621908 | 3_3:+21221830 | Msa0446040:five_prime_UTR |
| ATTTCGCGACAATGTTGGAA+GGG | 0.624496 | 3_3:+21225951 | Msa0446040:CDS |
| GAGATGTGGCTTCTTATAGA+GGG | 0.627578 | 3_3:+21222473 | Msa0446040:CDS |
| GAAAGATTCGATGACAGTGA+AGG | 0.627956 | 3_3:+21224444 | Msa0446040:CDS |
| TGACTGAAAGAGTTGTGGAT+AGG | 0.628996 | 3_3:-21222685 | None:intergenic |
| AGTGCAGTGTTGTCATATAG+CGG | 0.629605 | 3_3:+21221999 | Msa0446040:five_prime_UTR |
| CCAAGACTGAAGAGAAACGC+CGG | 0.633812 | 3_3:-21224304 | None:intergenic |
| TCTCCGGGGTTGTTTGCGGG+AGG | 0.635252 | 3_3:-21222362 | None:intergenic |
| CTATCATGAATGATGGCTGA+TGG | 0.644869 | 3_3:-21225872 | None:intergenic |
| CTGTTGTCAATCGTGGATCG+AGG | 0.649764 | 3_3:-21222162 | None:intergenic |
| AGGAAGAGGTGTGATGACAT+TGG | 0.654885 | 3_3:-21225534 | None:intergenic |
| GTTAGTGGATGTGAGAGTGA+CGG | 0.658483 | 3_3:+21222186 | Msa0446040:five_prime_UTR |
| AAACGTAAACTCAGTTCATG+TGG | 0.664234 | 3_3:-21225575 | None:intergenic |
| TTTCATCACCATCTACAACA+AGG | 0.679672 | 3_3:+21222836 | Msa0446040:CDS |
| TGGGATAATAACTTCCAACA+TGG | 0.689562 | 3_3:+21224336 | Msa0446040:CDS |
| CAGTTGATGGACGAAGTCGA+AGG | 0.701718 | 3_3:+21223049 | Msa0446040:CDS |
| GAAGTATTGTCGAATCTCGG+AGG | 0.730198 | 3_3:-21221188 | None:intergenic |
| GCTGTAGTACTGTAGCATAG+GGG | 0.731762 | 3_3:+21222117 | Msa0446040:five_prime_UTR |
| TTAGTGGAACAATAGCATAG+CGG | 0.803674 | 3_3:+21222024 | Msa0446040:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATCTTAAAAATATTGA+AGG | - | chr3_3:21223907-21223926 | None:intergenic | 10.0% |
| !!! | TTATTAGTTTTGATTGTTTT+TGG | + | chr3_3:21221397-21221416 | Msa0446040:intron | 15.0% |
| !! | TAAATATTGGAAAAAGAATT+TGG | + | chr3_3:21222261-21222280 | Msa0446040:CDS | 15.0% |
| !! | TAATATGAACTCTATATATA+AGG | - | chr3_3:21224918-21224937 | None:intergenic | 15.0% |
| !! | CATATTTATTAATTCTTCAT+AGG | - | chr3_3:21225831-21225850 | None:intergenic | 15.0% |
| !! | AAAAAACTAAAACTACTCAA+AGG | - | chr3_3:21221488-21221507 | None:intergenic | 20.0% |
| !!! | TTTGAGTAGTTTTAGTTTTT+TGG | + | chr3_3:21221487-21221506 | Msa0446040:intron | 20.0% |
| !!! | TTGAGTAGTTTTAGTTTTTT+GGG | + | chr3_3:21221488-21221507 | Msa0446040:intron | 20.0% |
| !!! | TTGATTATTTCTTTTTCTTC+AGG | + | chr3_3:21221762-21221781 | Msa0446040:intron | 20.0% |
| !! | TAATTGGCTAAATATATGTT+TGG | + | chr3_3:21221861-21221880 | Msa0446040:five_prime_UTR | 20.0% |
| !!! | AAGATGTTTTTTTAGATAGA+AGG | + | chr3_3:21222398-21222417 | Msa0446040:CDS | 20.0% |
| !!! | AGATGTTTTTTTAGATAGAA+GGG | + | chr3_3:21222399-21222418 | Msa0446040:CDS | 20.0% |
| !!! | ACCATATGATGATAATTTTA+AGG | + | chr3_3:21222579-21222598 | Msa0446040:CDS | 20.0% |
| !! | TCCTTAAAATTATCATCATA+TGG | - | chr3_3:21222583-21222602 | None:intergenic | 20.0% |
| !!! | TATGATGATAATTTTAAGGA+TGG | + | chr3_3:21222583-21222602 | Msa0446040:CDS | 20.0% |
| !!! | AATTTTCTCTATTCAGTATT+CGG | - | chr3_3:21222885-21222904 | None:intergenic | 20.0% |
| !!! | TCATTTAAAGATCCAATTTT+GGG | - | chr3_3:21223006-21223025 | None:intergenic | 20.0% |
| !!! | ATCATTTAAAGATCCAATTT+TGG | - | chr3_3:21223007-21223026 | None:intergenic | 20.0% |
| !!! | AAAAGAAAGAGTTCTAAAAA+AGG | - | chr3_3:21223302-21223321 | None:intergenic | 20.0% |
| !! | GAAAAATTGTAATGAAATCT+TGG | + | chr3_3:21223752-21223771 | Msa0446040:intron | 20.0% |
| !!! | TTGTAATTTTGATTAACTCA+AGG | - | chr3_3:21223985-21224004 | None:intergenic | 20.0% |
| !! | GAGTTACAAAATGAAAATTA+TGG | + | chr3_3:21224466-21224485 | Msa0446040:CDS | 20.0% |
| !! | CAAAGAATCATATGATAAAA+AGG | + | chr3_3:21224582-21224601 | Msa0446040:CDS | 20.0% |
| !!! | TTCTTAGTTTTTCTTTGTTT+AGG | + | chr3_3:21224807-21224826 | Msa0446040:intron | 20.0% |
| !!! | TCTTAGTTTTTCTTTGTTTA+GGG | + | chr3_3:21224808-21224827 | Msa0446040:intron | 20.0% |
| !! | ATGATAGAAATTTCATAGAA+AGG | + | chr3_3:21224863-21224882 | Msa0446040:intron | 20.0% |
| !!! | TTTTTTCATATCACATAACT+AGG | - | chr3_3:21224984-21225003 | None:intergenic | 20.0% |
| !! | AGTTATGTGATATGAAAAAA+TGG | + | chr3_3:21224984-21225003 | Msa0446040:intron | 20.0% |
| !! | AGAACAAATAAGTATATGTA+CGG | - | chr3_3:21225188-21225207 | None:intergenic | 20.0% |
| !!! | CCATAAAAAAATTCTTTTTC+CGG | + | chr3_3:21225342-21225361 | Msa0446040:intron | 20.0% |
| !! | AAAGAAGATATTGTATTCTA+TGG | + | chr3_3:21226102-21226121 | Msa0446040:CDS | 20.0% |
| !!! | ATTGATATCATCTAGTTTTT+AGG | + | chr3_3:21226143-21226162 | Msa0446040:exon | 20.0% |
| !!! | TGATGTAAATTTTGAAACAA+GGG | - | chr3_3:21226217-21226236 | None:intergenic | 20.0% |
| !!! | ATGATGTAAATTTTGAAACA+AGG | - | chr3_3:21226218-21226237 | None:intergenic | 20.0% |
| ! | TTATTGTAAGAAGAAAATGC+TGG | + | chr3_3:21221373-21221392 | Msa0446040:intron | 25.0% |
| ! | TATTGTAAGAAGAAAATGCT+GGG | + | chr3_3:21221374-21221393 | Msa0446040:intron | 25.0% |
| !!! | TTTTGATTGTTTTTGGCAAA+TGG | + | chr3_3:21221404-21221423 | Msa0446040:intron | 25.0% |
| !!! | TTTGATTGTTTTTGGCAAAT+GGG | + | chr3_3:21221405-21221424 | Msa0446040:intron | 25.0% |
| !!! | TGAGTAGTTTTAGTTTTTTG+GGG | + | chr3_3:21221489-21221508 | Msa0446040:intron | 25.0% |
| ! | AAAACATAAATTCTTGCCAT+CGG | - | chr3_3:21221696-21221715 | None:intergenic | 25.0% |
| !! | TTCTTCTTGTTCCTTATTTA+TGG | + | chr3_3:21221720-21221739 | Msa0446040:intron | 25.0% |
| ! | ATCAAAATCTACTCTTCAAA+TGG | - | chr3_3:21221810-21221829 | None:intergenic | 25.0% |
| !! | ATTTGAAGAGTAGATTTTGA+TGG | + | chr3_3:21221809-21221828 | Msa0446040:five_prime_UTR | 25.0% |
| ! | ATGGAAGTGATTTAATTGAA+GGG | + | chr3_3:21221885-21221904 | Msa0446040:five_prime_UTR | 25.0% |
| !!! | TGTTGATAATTGAAAGAAAG+AGG | + | chr3_3:21221951-21221970 | Msa0446040:five_prime_UTR | 25.0% |
| !!! | GTTGATAATTGAAAGAAAGA+GGG | + | chr3_3:21221952-21221971 | Msa0446040:five_prime_UTR | 25.0% |
| ! | CTGGTTATTTAGCTAAATAT+TGG | + | chr3_3:21222248-21222267 | Msa0446040:CDS | 25.0% |
| ! | TGGAAAAAGAATTTGGAAAA+TGG | + | chr3_3:21222268-21222287 | Msa0446040:CDS | 25.0% |
| !!! | GATGTTTTTTTAGATAGAAG+GGG | + | chr3_3:21222400-21222419 | Msa0446040:CDS | 25.0% |
| ! | TTATCATCATATGGTGATAA+TGG | - | chr3_3:21222574-21222593 | None:intergenic | 25.0% |
| !! | CAACTTTCTAAGGAATTTAA+TGG | - | chr3_3:21222757-21222776 | None:intergenic | 25.0% |
| !! | AAAGACATATTCTTCCATTT+TGG | - | chr3_3:21222809-21222828 | None:intergenic | 25.0% |
| ! | GAAAAACACAAAAATGTAGT+TGG | + | chr3_3:21222964-21222983 | Msa0446040:CDS | 25.0% |
| ! | AAACATTTCAAACACAACAT+AGG | - | chr3_3:21223154-21223173 | None:intergenic | 25.0% |
| !!! | TTGCAATATAACGGATTTTT+AGG | - | chr3_3:21223247-21223266 | None:intergenic | 25.0% |
| ! | TATTTAAGCTGTTTAGTTAC+TGG | - | chr3_3:21223479-21223498 | None:intergenic | 25.0% |
| ! | ATAATTTCCTCAAGAATAAC+AGG | - | chr3_3:21223665-21223684 | None:intergenic | 25.0% |
| ! | ATAGAATGAAAAGAATGCTA+TGG | - | chr3_3:21223701-21223720 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCGTTAGTTAGTT+TGG | + | chr3_3:21224050-21224069 | Msa0446040:intron | 25.0% |
| !!! | TTTTTCTTTGTTTAGGGTTT+AGG | + | chr3_3:21224814-21224833 | Msa0446040:intron | 25.0% |
| !!! | TTTTCTTTGTTTAGGGTTTA+GGG | + | chr3_3:21224815-21224834 | Msa0446040:intron | 25.0% |
| ! | TTCATAGAAAGGAATGAAAA+TGG | + | chr3_3:21224874-21224893 | Msa0446040:intron | 25.0% |
| ! | TAAGGCATATAAATCAGAAA+GGG | - | chr3_3:21224900-21224919 | None:intergenic | 25.0% |
| ! | ATAAGGCATATAAATCAGAA+AGG | - | chr3_3:21224901-21224920 | None:intergenic | 25.0% |
| !!! | GATATGAAAAAATGGATTGT+TGG | + | chr3_3:21224992-21225011 | Msa0446040:intron | 25.0% |
| ! | CAAAATAAGGCATGAAATAT+TGG | - | chr3_3:21225287-21225306 | None:intergenic | 25.0% |
| ! | TAGAACTTCAAAGCAAAATA+AGG | - | chr3_3:21225300-21225319 | None:intergenic | 25.0% |
| !!! | CCGGAAAAAGAATTTTTTTA+TGG | - | chr3_3:21225345-21225364 | None:intergenic | 25.0% |
| !!! | AAGTTTTGATTGTGATAATG+AGG | + | chr3_3:21226009-21226028 | Msa0446040:CDS | 25.0% |
| !!! | TTCTTTGCATTTTGAAAAAG+AGG | - | chr3_3:21226088-21226107 | None:intergenic | 25.0% |
| CAGACAAACATTGAAGATAA+CGG | + | chr3_3:21221153-21221172 | Msa0446040:five_prime_UTR | 30.0% | |
| TTCTGACATTGAAGAAAACA+AGG | - | chr3_3:21221320-21221339 | None:intergenic | 30.0% | |
| !! | AAATGGGTTTTTCTCAGAAA+AGG | + | chr3_3:21221421-21221440 | Msa0446040:intron | 30.0% |
| !! | AATGGGTTTTTCTCAGAAAA+GGG | + | chr3_3:21221422-21221441 | Msa0446040:intron | 30.0% |
| !! | AGTTGATTGTTTGTTGTTCT+TGG | + | chr3_3:21221541-21221560 | Msa0446040:intron | 30.0% |
| ACCAAAAATTATTCCAACTG+AGG | + | chr3_3:21221653-21221672 | Msa0446040:intron | 30.0% | |
| ! | TCCTCAGTTGGAATAATTTT+TGG | - | chr3_3:21221657-21221676 | None:intergenic | 30.0% |
| ! | CTTGTTCCTTATTTATGGTT+AGG | + | chr3_3:21221725-21221744 | Msa0446040:intron | 30.0% |
| GAACAACCTAACCATAAATA+AGG | - | chr3_3:21221734-21221753 | None:intergenic | 30.0% | |
| !! | TCTTTTTCTTCAGGTTTTGT+TGG | + | chr3_3:21221771-21221790 | Msa0446040:intron | 30.0% |
| ! | TTGAAGGGGTTTGATTTAAT+TGG | + | chr3_3:21221845-21221864 | Msa0446040:five_prime_UTR | 30.0% |
| CATGGAAGTGATTTAATTGA+AGG | + | chr3_3:21221884-21221903 | Msa0446040:five_prime_UTR | 30.0% | |
| AACAAACTGTTGTCAATTAC+CGG | + | chr3_3:21222084-21222103 | Msa0446040:five_prime_UTR | 30.0% | |
| !!! | TTTTTTAGATAGAAGGGGTT+CGG | + | chr3_3:21222405-21222424 | Msa0446040:CDS | 30.0% |
| ! | TTCCTTAGAAAGTTGTTTCA+TGG | + | chr3_3:21222762-21222781 | Msa0446040:CDS | 30.0% |
| ! | ATATAAAGAGCATGCCAAAA+TGG | + | chr3_3:21222792-21222811 | Msa0446040:CDS | 30.0% |
| AAACACAAAAATGTAGTTGG+AGG | + | chr3_3:21222967-21222986 | Msa0446040:CDS | 30.0% | |
| AACACAAAAATGTAGTTGGA+GGG | + | chr3_3:21222968-21222987 | Msa0446040:CDS | 30.0% | |
| TGCATAAAGTTTCATCTTCT+TGG | - | chr3_3:21223031-21223050 | None:intergenic | 30.0% | |
| ATGAAACTTTATGCAGTTGA+TGG | + | chr3_3:21223036-21223055 | Msa0446040:CDS | 30.0% | |
| !!! | TTTTCTGATGACTTGTTTAG+TGG | + | chr3_3:21223078-21223097 | Msa0446040:CDS | 30.0% |
| ! | CTCATTTTCCAGCAATATAA+AGG | - | chr3_3:21223194-21223213 | None:intergenic | 30.0% |
| CTTTATATTGCTGGAAAATG+AGG | + | chr3_3:21223192-21223211 | Msa0446040:intron | 30.0% | |
| CTAAACAGCTTAAATATAGC+TGG | + | chr3_3:21223483-21223502 | Msa0446040:intron | 30.0% | |
| !!! | TTTTGCGTTTTAACTGGTTT+AGG | + | chr3_3:21223880-21223899 | Msa0446040:intron | 30.0% |
| TACTAACGAAAGATACATTC+AGG | + | chr3_3:21224115-21224134 | Msa0446040:intron | 30.0% | |
| CATTGAGTAAATAGTCACTT+TGG | - | chr3_3:21224196-21224215 | None:intergenic | 30.0% | |
| !! | TTCTCTTTTATTTGCCATGT+TGG | - | chr3_3:21224353-21224372 | None:intergenic | 30.0% |
| ! | AGCTATCAATATGCTTTTCA+GGG | - | chr3_3:21224546-21224565 | None:intergenic | 30.0% |
| GTTCTACTTCTAGTAGAAAT+TGG | + | chr3_3:21225203-21225222 | Msa0446040:intron | 30.0% | |
| TCTAGTAGAAATTGGAATTG+TGG | + | chr3_3:21225211-21225230 | Msa0446040:intron | 30.0% | |
| ! | TTTTGTTCCAATGCTTCTTT+TGG | + | chr3_3:21225384-21225403 | Msa0446040:intron | 30.0% |
| ! | ATTTGAACCAAAAGAAGCAT+TGG | - | chr3_3:21225394-21225413 | None:intergenic | 30.0% |
| ACAATTCTTAAGTGTGACAA+TGG | + | chr3_3:21225416-21225435 | Msa0446040:intron | 30.0% | |
| CAATTCTTAAGTGTGACAAT+GGG | + | chr3_3:21225417-21225436 | Msa0446040:intron | 30.0% | |
| ! | CAAATTTTTGTAGATTGACC+CGG | + | chr3_3:21225451-21225470 | Msa0446040:intron | 30.0% |
| ! | ACATGATGTTAGTTTCCAAA+AGG | + | chr3_3:21225694-21225713 | Msa0446040:CDS | 30.0% |
| ATCATTAAGTTTCCTCTAGT+GGG | - | chr3_3:21225728-21225747 | None:intergenic | 30.0% | |
| TAGATTGAGAATTAAGGGTT+GGG | - | chr3_3:21225777-21225796 | None:intergenic | 30.0% | |
| ATAGATTGAGAATTAAGGGT+TGG | - | chr3_3:21225778-21225797 | None:intergenic | 30.0% | |
| CCTGATAGATTGAGAATTAA+GGG | - | chr3_3:21225782-21225801 | None:intergenic | 30.0% | |
| TCTAGTGAATTGAATGTTAG+TGG | + | chr3_3:21225980-21225999 | Msa0446040:CDS | 30.0% | |
| !! | TTTTGATTGTGATAATGAGG+AGG | + | chr3_3:21226012-21226031 | Msa0446040:CDS | 30.0% |
| ATTGTTGAAAGAACCAAGAA+AGG | + | chr3_3:21226058-21226077 | Msa0446040:CDS | 30.0% | |
| !!! | CATCTAGTTTTTAGGAATGT+AGG | + | chr3_3:21226151-21226170 | Msa0446040:three_prime_UTR | 30.0% |
| AAATTTACATCATGCTTGCA+AGG | + | chr3_3:21226225-21226244 | Msa0446040:three_prime_UTR | 30.0% | |
| GTATCCTAGATTTCGTTTCA+CGG | + | chr3_3:21221213-21221232 | Msa0446040:five_prime_UTR | 35.0% | |
| ATTTCGTTTCACGGATACTA+AGG | + | chr3_3:21221222-21221241 | Msa0446040:five_prime_UTR | 35.0% | |
| TTTGTAATCCAGAGTTCGAT+CGG | + | chr3_3:21221613-21221632 | Msa0446040:intron | 35.0% | |
| !! | GTAGATTTTGATGGTTAGAG+TGG | + | chr3_3:21221818-21221837 | Msa0446040:five_prime_UTR | 35.0% |
| GGCTAAATATATGTTTGGCA+TGG | + | chr3_3:21221866-21221885 | Msa0446040:five_prime_UTR | 35.0% | |
| !!! | AGGGCTTTTTTACTGATTCA+TGG | + | chr3_3:21221904-21221923 | Msa0446040:five_prime_UTR | 35.0% |
| TTCATGGAAAGTTCTTCTCT+TGG | + | chr3_3:21221920-21221939 | Msa0446040:five_prime_UTR | 35.0% | |
| ! | GTAACTTGTAGTGTAGAGTT+TGG | + | chr3_3:21221974-21221993 | Msa0446040:five_prime_UTR | 35.0% |
| TTAGTGGAACAATAGCATAG+CGG | + | chr3_3:21222024-21222043 | Msa0446040:five_prime_UTR | 35.0% | |
| ! | TGACGGTAAAAATGGATTTG+TGG | + | chr3_3:21222203-21222222 | Msa0446040:exon | 35.0% |
| ! | CTCTGAAGACAAATGATAAG+AGG | - | chr3_3:21222299-21222318 | None:intergenic | 35.0% |
| CTCTTATCATTTGTCTTCAG+AGG | + | chr3_3:21222297-21222316 | Msa0446040:CDS | 35.0% | |
| !! | AATTTTAAGGATGGTGCAGA+TGG | + | chr3_3:21222592-21222611 | Msa0446040:CDS | 35.0% |
| ! | GAGCAAAATACGAGTAGTTT+TGG | + | chr3_3:21222619-21222638 | Msa0446040:CDS | 35.0% |
| ATTTGTGACTGAAAGAGTTG+TGG | - | chr3_3:21222693-21222712 | None:intergenic | 35.0% | |
| TAATGGTCTACTAACATGCT+CGG | - | chr3_3:21222740-21222759 | None:intergenic | 35.0% | |
| AGCCATGAAACAACTTTCTA+AGG | - | chr3_3:21222767-21222786 | None:intergenic | 35.0% | |
| TTTCATCACCATCTACAACA+AGG | + | chr3_3:21222836-21222855 | Msa0446040:CDS | 35.0% | |
| ! | CGAAATAACCTTGTTGTAGA+TGG | - | chr3_3:21222847-21222866 | None:intergenic | 35.0% |
| ! | AGGTTATTTCGTGTTAGCAA+TGG | + | chr3_3:21222856-21222875 | Msa0446040:CDS | 35.0% |
| GATTATAAGCTGCATAAAGC+TGG | + | chr3_3:21222937-21222956 | Msa0446040:CDS | 35.0% | |
| ACACAAAAATGTAGTTGGAG+GGG | + | chr3_3:21222969-21222988 | Msa0446040:CDS | 35.0% | |
| ! | TAAAGATCCAATTTTGGGCA+AGG | - | chr3_3:21223001-21223020 | None:intergenic | 35.0% |
| AGTGGAAAACTCACTCAATA+TGG | + | chr3_3:21223096-21223115 | Msa0446040:CDS | 35.0% | |
| CTTGCAAACCTTTATATTGC+TGG | + | chr3_3:21223183-21223202 | Msa0446040:intron | 35.0% | |
| CAATCGCAGTTGCAATATAA+CGG | - | chr3_3:21223256-21223275 | None:intergenic | 35.0% | |
| AAACACACCTGTTATTCTTG+AGG | + | chr3_3:21223655-21223674 | Msa0446040:intron | 35.0% | |
| TGAAAAGAATGCTATGGCAT+TGG | - | chr3_3:21223695-21223714 | None:intergenic | 35.0% | |
| !! | AAAGCGTTTTGCGTTTTAAC+TGG | + | chr3_3:21223874-21223893 | Msa0446040:intron | 35.0% |
| ACTAACGAAAAAACACATCG+AGG | - | chr3_3:21224045-21224064 | None:intergenic | 35.0% | |
| !! | TCGTTAGTTAGTTTGGTTCT+TGG | + | chr3_3:21224057-21224076 | Msa0446040:intron | 35.0% |
| TGATACTGCCTCAAACATTT+AGG | + | chr3_3:21224168-21224187 | Msa0446040:intron | 35.0% | |
| GATACTGCCTCAAACATTTA+GGG | + | chr3_3:21224169-21224188 | Msa0446040:intron | 35.0% | |
| TGGGATAATAACTTCCAACA+TGG | + | chr3_3:21224336-21224355 | Msa0446040:CDS | 35.0% | |
| ACATGTGATCATTCCTTCAA+TGG | + | chr3_3:21224499-21224518 | Msa0446040:CDS | 35.0% | |
| TGATCATTCCTTCAATGGTA+AGG | + | chr3_3:21224504-21224523 | Msa0446040:CDS | 35.0% | |
| ! | GCTATCAATATGCTTTTCAG+GGG | - | chr3_3:21224545-21224564 | None:intergenic | 35.0% |
| ! | GAGCTATCAATATGCTTTTC+AGG | - | chr3_3:21224547-21224566 | None:intergenic | 35.0% |
| GATTCTTTGCATTCTACTCT+GGG | - | chr3_3:21224571-21224590 | None:intergenic | 35.0% | |
| TGATTCTTTGCATTCTACTC+TGG | - | chr3_3:21224572-21224591 | None:intergenic | 35.0% | |
| AAGCAGAACTTGAGAGATTA+GGG | + | chr3_3:21224650-21224669 | Msa0446040:CDS | 35.0% | |
| ! | AGCATAACTGTTACGTTTTC+TGG | + | chr3_3:21224727-21224746 | Msa0446040:intron | 35.0% |
| CTAGAATCAGAAAGAATGGA+TGG | - | chr3_3:21225018-21225037 | None:intergenic | 35.0% | |
| GCAACTAGAATCAGAAAGAA+TGG | - | chr3_3:21225022-21225041 | None:intergenic | 35.0% | |
| !! | GTTTGGATTGATGGTGAATT+TGG | + | chr3_3:21225065-21225084 | Msa0446040:intron | 35.0% |
| TTTGAGCTGCAACAATATCA+CGG | - | chr3_3:21225107-21225126 | None:intergenic | 35.0% | |
| TATGAGATGTAACTTCACAC+CGG | - | chr3_3:21225364-21225383 | None:intergenic | 35.0% | |
| AAACGTAAACTCAGTTCATG+TGG | - | chr3_3:21225578-21225597 | None:intergenic | 35.0% | |
| CCAAAGACTTTACTTTCATC+TGG | - | chr3_3:21225667-21225686 | None:intergenic | 35.0% | |
| CCAGATGAAAGTAAAGTCTT+TGG | + | chr3_3:21225664-21225683 | Msa0446040:CDS | 35.0% | |
| CATCATTAAGTTTCCTCTAG+TGG | - | chr3_3:21225729-21225748 | None:intergenic | 35.0% | |
| CCCTTAATTCTCAATCTATC+AGG | + | chr3_3:21225779-21225798 | Msa0446040:CDS | 35.0% | |
| GCCTGATAGATTGAGAATTA+AGG | - | chr3_3:21225783-21225802 | None:intergenic | 35.0% | |
| AAAAAGAGGAGAACCTTTCT+TGG | - | chr3_3:21226074-21226093 | None:intergenic | 35.0% | |
| ! | TCTGCAACAACGTGTTTTCA+CGG | - | chr3_3:21221137-21221156 | None:intergenic | 40.0% |
| !! | CACGAAGTATTGTCGAATCT+CGG | - | chr3_3:21221194-21221213 | None:intergenic | 40.0% |
| GTATCCGTGAAACGAAATCT+AGG | - | chr3_3:21221220-21221239 | None:intergenic | 40.0% | |
| !! | CAGAAAAGGGTTTTGTAGTG+AGG | + | chr3_3:21221435-21221454 | Msa0446040:intron | 40.0% |
| GTTCTTGGAATGTTTGTGTC+TGG | + | chr3_3:21221556-21221575 | Msa0446040:intron | 40.0% | |
| TTCCAACTGAGGATCGAATT+CGG | + | chr3_3:21221664-21221683 | Msa0446040:intron | 40.0% | |
| TGGTTAGAGTGGTGAATTGA+AGG | + | chr3_3:21221829-21221848 | Msa0446040:five_prime_UTR | 40.0% | |
| GGTTAGAGTGGTGAATTGAA+GGG | + | chr3_3:21221830-21221849 | Msa0446040:five_prime_UTR | 40.0% | |
| GTTAGAGTGGTGAATTGAAG+GGG | + | chr3_3:21221831-21221850 | Msa0446040:five_prime_UTR | 40.0% | |
| AAGTTCTTCTCTTGGTTGCT+TGG | + | chr3_3:21221928-21221947 | Msa0446040:five_prime_UTR | 40.0% | |
| AGTGCAGTGTTGTCATATAG+CGG | + | chr3_3:21221999-21222018 | Msa0446040:five_prime_UTR | 40.0% | |
| ! | TTGTCATATAGCGGCTTTAG+TGG | + | chr3_3:21222008-21222027 | Msa0446040:five_prime_UTR | 40.0% |
| ACTAACTCTGTTGTCAATCG+TGG | - | chr3_3:21222172-21222191 | None:intergenic | 40.0% | |
| ACGATTGACAACAGAGTTAG+TGG | + | chr3_3:21222171-21222190 | Msa0446040:five_prime_UTR | 40.0% | |
| TGTGAGAGTGACGGTAAAAA+TGG | + | chr3_3:21222195-21222214 | Msa0446040:exon | 40.0% | |
| GAGATGTGGCTTCTTATAGA+GGG | + | chr3_3:21222473-21222492 | Msa0446040:CDS | 40.0% | |
| !!! | ACGAGTAGTTTTGGCAATCA+TGG | + | chr3_3:21222628-21222647 | Msa0446040:CDS | 40.0% |
| !!! | CGAGTAGTTTTGGCAATCAT+GGG | + | chr3_3:21222629-21222648 | Msa0446040:CDS | 40.0% |
| ATCACTTTGGCAGAAAACTC+AGG | - | chr3_3:21222664-21222683 | None:intergenic | 40.0% | |
| GTTGTGGATAGGAATCACTT+TGG | - | chr3_3:21222677-21222696 | None:intergenic | 40.0% | |
| TGACTGAAAGAGTTGTGGAT+AGG | - | chr3_3:21222688-21222707 | None:intergenic | 40.0% | |
| AAAACGTTTCGTCGAGAGAA+AGG | - | chr3_3:21222716-21222735 | None:intergenic | 40.0% | |
| AATGGTCTACTAACATGCTC+GGG | - | chr3_3:21222739-21222758 | None:intergenic | 40.0% | |
| ! | GTTGTAGATGGTGATGAAAG+AGG | - | chr3_3:21222835-21222854 | None:intergenic | 40.0% |
| ! | AGTTTGATCAGTGCATTGAC+TGG | + | chr3_3:21222907-21222926 | Msa0446040:CDS | 40.0% |
| ! | TTTTGAATTGCAGTCCGCAA+CGG | - | chr3_3:21223279-21223298 | None:intergenic | 40.0% |
| ATGCGACTTCTGTTACAATC+AGG | + | chr3_3:21223378-21223397 | Msa0446040:intron | 40.0% | |
| !! | TACCTGCATTTCTAGTAGCA+GGG | + | chr3_3:21223406-21223425 | Msa0446040:intron | 40.0% |
| !!! | TCTTGGTTACTTTTGCTCAC+AGG | + | chr3_3:21223769-21223788 | Msa0446040:intron | 40.0% |
| ! | TGTGCTCTTGATAGTCAGTT+TGG | + | chr3_3:21224018-21224037 | Msa0446040:intron | 40.0% |
| CTTTGGTCCCTAAATGTTTG+AGG | - | chr3_3:21224179-21224198 | None:intergenic | 40.0% | |
| AACGCCGGATCTGATAATTA+CGG | - | chr3_3:21224292-21224311 | None:intergenic | 40.0% | |
| TTCAGTCTTGGGATTTCTCT+TGG | + | chr3_3:21224316-21224335 | Msa0446040:CDS | 40.0% | |
| TCAGTCTTGGGATTTCTCTT+GGG | + | chr3_3:21224317-21224336 | Msa0446040:CDS | 40.0% | |
| GTTGAAGCAGAATGAGAACT+TGG | + | chr3_3:21224393-21224412 | Msa0446040:CDS | 40.0% | |
| GAAAGATTCGATGACAGTGA+AGG | + | chr3_3:21224444-21224463 | Msa0446040:CDS | 40.0% | |
| ATGTAGCTCCTTACCATTGA+AGG | - | chr3_3:21224515-21224534 | None:intergenic | 40.0% | |
| GAAGCAGAACTTGAGAGATT+AGG | + | chr3_3:21224649-21224668 | Msa0446040:CDS | 40.0% | |
| AGAACTTGAGAGATTAGGGT+TGG | + | chr3_3:21224654-21224673 | Msa0446040:CDS | 40.0% | |
| !! | GAAATTATCCGAGCTTGTTG+AGG | + | chr3_3:21224702-21224721 | Msa0446040:CDS | 40.0% |
| TATGCTTACCTCAACAAGCT+CGG | - | chr3_3:21224713-21224732 | None:intergenic | 40.0% | |
| !! | GTACGGATTGATAGTGAGTT+TGG | - | chr3_3:21225171-21225190 | None:intergenic | 40.0% |
| ! | TAGTGGGAGAAGATTCCTTT+TGG | - | chr3_3:21225712-21225731 | None:intergenic | 40.0% |
| CTATCATGAATGATGGCTGA+TGG | - | chr3_3:21225875-21225894 | None:intergenic | 40.0% | |
| GTCGTCACTATCATGAATGA+TGG | - | chr3_3:21225882-21225901 | None:intergenic | 40.0% | |
| ! | CATGATAGTGACGACAAAGA+AGG | + | chr3_3:21225887-21225906 | Msa0446040:CDS | 40.0% |
| GCATTCCAATCATGTGAAAG+CGG | - | chr3_3:21225914-21225933 | None:intergenic | 40.0% | |
| ATACGATTTCGCGACAATGT+TGG | + | chr3_3:21225946-21225965 | Msa0446040:CDS | 40.0% | |
| ATTTCGCGACAATGTTGGAA+GGG | + | chr3_3:21225951-21225970 | Msa0446040:CDS | 40.0% | |
| ! | TGATTGTGATAATGAGGAGG+TGG | + | chr3_3:21226015-21226034 | Msa0446040:CDS | 40.0% |
| !! | GAAGTATTGTCGAATCTCGG+AGG | - | chr3_3:21221191-21221210 | None:intergenic | 45.0% |
| TAATCCAGAGTTCGATCGGA+AGG | + | chr3_3:21221617-21221636 | Msa0446040:intron | 45.0% | |
| TCCAACTGAGGATCGAATTC+GGG | + | chr3_3:21221665-21221684 | Msa0446040:intron | 45.0% | |
| TACTACAGCGCTTCTATAGC+CGG | - | chr3_3:21222106-21222125 | None:intergenic | 45.0% | |
| CGCTGTAGTACTGTAGCATA+GGG | + | chr3_3:21222116-21222135 | Msa0446040:five_prime_UTR | 45.0% | |
| GCTGTAGTACTGTAGCATAG+GGG | + | chr3_3:21222117-21222136 | Msa0446040:five_prime_UTR | 45.0% | |
| ! | GTTAGTGGATGTGAGAGTGA+CGG | + | chr3_3:21222186-21222205 | Msa0446040:five_prime_UTR | 45.0% |
| ! | TTTTCCCTTTTCACGTCTCC+GGG | - | chr3_3:21222380-21222399 | None:intergenic | 45.0% |
| ! | CTTTTCCCTTTTCACGTCTC+CGG | - | chr3_3:21222381-21222400 | None:intergenic | 45.0% |
| ATTCTCTGATGCGAGTTCCT+TGG | + | chr3_3:21222435-21222454 | Msa0446040:CDS | 45.0% | |
| GGAGATGTGGCTTCTTATAG+AGG | + | chr3_3:21222472-21222491 | Msa0446040:CDS | 45.0% | |
| !! | CAGTGCATTGACTGGAAGTA+AGG | + | chr3_3:21222915-21222934 | Msa0446040:CDS | 45.0% |
| GTTCCTTCCTTGCCCAAAAT+TGG | + | chr3_3:21222991-21223010 | Msa0446040:CDS | 45.0% | |
| ! | GATCCAATTTTGGGCAAGGA+AGG | - | chr3_3:21222997-21223016 | None:intergenic | 45.0% |
| !!! | GGATTTTTAGGTCTCCGCAA+CGG | - | chr3_3:21223235-21223254 | None:intergenic | 45.0% |
| !! | CTACCTGCATTTCTAGTAGC+AGG | + | chr3_3:21223405-21223424 | Msa0446040:intron | 45.0% |
| GGTGCAAAGCTAATTCTGAC+TGG | + | chr3_3:21223447-21223466 | Msa0446040:intron | 45.0% | |
| ACGCCCGTAATTATCAGATC+CGG | + | chr3_3:21224285-21224304 | Msa0446040:intron | 45.0% | |
| ACGCCGGATCTGATAATTAC+GGG | - | chr3_3:21224291-21224310 | None:intergenic | 45.0% | |
| CTGGTGACTACACAAGTCTT+CGG | + | chr3_3:21224746-21224765 | Msa0446040:intron | 45.0% | |
| TGCAGTTGCACTCTCTGTTA+AGG | - | chr3_3:21224953-21224972 | None:intergenic | 45.0% | |
| ! | AACAGAGAGTGCAACTGCAA+AGG | + | chr3_3:21224954-21224973 | Msa0446040:intron | 45.0% |
| CAAAATCTGCTACGAACTCC+GGG | - | chr3_3:21225472-21225491 | None:intergenic | 45.0% | |
| GCAAAATCTGCTACGAACTC+CGG | - | chr3_3:21225473-21225492 | None:intergenic | 45.0% | |
| ! | TTCGTAGCAGATTTTGCGCA+AGG | + | chr3_3:21225476-21225495 | Msa0446040:CDS | 45.0% |
| ! | AGGAAGAGGTGTGATGACAT+TGG | - | chr3_3:21225537-21225556 | None:intergenic | 45.0% |
| ATGTGGCGAAACTGCATAGT+TGG | - | chr3_3:21225561-21225580 | None:intergenic | 45.0% | |
| AAGGAATCTTCTCCCACTAG+AGG | + | chr3_3:21225713-21225732 | Msa0446040:CDS | 45.0% | |
| ! | GGCTGATGGTGAATTGTCTT+CGG | - | chr3_3:21225861-21225880 | None:intergenic | 45.0% |
| AAGGTCCGCTTTCACATGAT+TGG | + | chr3_3:21225906-21225925 | Msa0446040:CDS | 45.0% | |
| GATTTCGCGACAATGTTGGA+AGG | + | chr3_3:21225950-21225969 | Msa0446040:CDS | 45.0% | |
| AGGTGGAGAGGCTATTGATA+AGG | + | chr3_3:21226032-21226051 | Msa0446040:CDS | 45.0% | |
| CTTACCTTCCGATCGAACTC+TGG | - | chr3_3:21221624-21221643 | None:intergenic | 50.0% | |
| ACCCGAATTCGATCCTCAGT+TGG | - | chr3_3:21221669-21221688 | None:intergenic | 50.0% | |
| ! | TCGAATTCGGGTTCTTCCGA+TGG | + | chr3_3:21221677-21221696 | Msa0446040:intron | 50.0% |
| GCGCTGTAGTACTGTAGCAT+AGG | + | chr3_3:21222115-21222134 | Msa0446040:five_prime_UTR | 50.0% | |
| CTGTTGTCAATCGTGGATCG+AGG | - | chr3_3:21222165-21222184 | None:intergenic | 50.0% | |
| !!! | TGGCTTGCAGCTGCTTTTAC+TGG | + | chr3_3:21222223-21222242 | Msa0446040:CDS | 50.0% |
| TAAGGGGCTGCTAAAGGACT+CGG | - | chr3_3:21222341-21222360 | None:intergenic | 50.0% | |
| GTTGTTTGCGGGAGGTTAAG+GGG | - | chr3_3:21222357-21222376 | None:intergenic | 50.0% | |
| GGTTGTTTGCGGGAGGTTAA+GGG | - | chr3_3:21222358-21222377 | None:intergenic | 50.0% | |
| ! | TTTCCCTTTTCACGTCTCCG+GGG | - | chr3_3:21222379-21222398 | None:intergenic | 50.0% |
| TCTGATGCGAGTTCCTTGGA+TGG | + | chr3_3:21222439-21222458 | Msa0446040:CDS | 50.0% | |
| TCCTTGGATGGTCCTTCAAC+AGG | + | chr3_3:21222451-21222470 | Msa0446040:CDS | 50.0% | |
| TCCTGTTGAAGGACCATCCA+AGG | - | chr3_3:21222455-21222474 | None:intergenic | 50.0% | |
| TGGTCCTTCAACAGGAGATG+TGG | + | chr3_3:21222459-21222478 | Msa0446040:CDS | 50.0% | |
| GAAGCCACATCTCCTGTTGA+AGG | - | chr3_3:21222466-21222485 | None:intergenic | 50.0% | |
| !! | CAGTTGATGGACGAAGTCGA+AGG | + | chr3_3:21223049-21223068 | Msa0446040:CDS | 50.0% |
| GCTGGAAAATGAGGCTAACG+CGG | + | chr3_3:21223201-21223220 | Msa0446040:intron | 50.0% | |
| CACCCTGCTACTAGAAATGC+AGG | - | chr3_3:21223411-21223430 | None:intergenic | 50.0% | |
| !! | CTGCATTTCTAGTAGCAGGG+TGG | + | chr3_3:21223409-21223428 | Msa0446040:intron | 50.0% |
| AGCTTTGCACCTGCTATTGC+AGG | - | chr3_3:21223438-21223457 | None:intergenic | 50.0% | |
| ! | GACTATCAAGAGCACATGCG+AGG | - | chr3_3:21224014-21224033 | None:intergenic | 50.0% |
| CCAAGACTGAAGAGAAACGC+CGG | - | chr3_3:21224307-21224326 | None:intergenic | 50.0% | |
| CGGCGTTTCTCTTCAGTCTT+GGG | + | chr3_3:21224305-21224324 | Msa0446040:CDS | 50.0% | |
| GGACATGAATGCGTCAAGCT+TGG | + | chr3_3:21224675-21224694 | Msa0446040:CDS | 50.0% | |
| TGAATGCGTCAAGCTTGGAC+AGG | + | chr3_3:21224680-21224699 | Msa0446040:CDS | 50.0% | |
| AGGTGAGTTTCGAGCTGACA+CGG | + | chr3_3:21225496-21225515 | Msa0446040:CDS | 50.0% | |
| TTTCGAGCTGACACGGTCAA+TGG | + | chr3_3:21225503-21225522 | Msa0446040:CDS | 50.0% | |
| ACTGCATAGTTGGCAGGAAG+AGG | - | chr3_3:21225551-21225570 | None:intergenic | 50.0% | |
| ! | CCTTCACTCGTGTTTCGAGT+TGG | - | chr3_3:21225619-21225638 | None:intergenic | 50.0% |
| CCAACTCGAAACACGAGTGA+AGG | + | chr3_3:21225616-21225635 | Msa0446040:CDS | 50.0% | |
| ! | GTGATAATGAGGAGGTGGAG+AGG | + | chr3_3:21226020-21226039 | Msa0446040:CDS | 50.0% |
| !!! | GCAGCTGCTTTTACTGGAGC+TGG | + | chr3_3:21222229-21222248 | Msa0446040:CDS | 55.0% |
| GGAGGTTAAGGGGCTGCTAA+AGG | - | chr3_3:21222347-21222366 | None:intergenic | 55.0% | |
| GGGTTGTTTGCGGGAGGTTA+AGG | - | chr3_3:21222359-21222378 | None:intergenic | 55.0% | |
| TAACCTCCCGCAAACAACCC+CGG | + | chr3_3:21222359-21222378 | Msa0446040:CDS | 55.0% | |
| ACAACCCCGGAGACGTGAAA+AGG | + | chr3_3:21222372-21222391 | Msa0446040:CDS | 55.0% | |
| CAACCCCGGAGACGTGAAAA+GGG | + | chr3_3:21222373-21222392 | Msa0446040:CDS | 55.0% | |
| TGCAACTGCGATTGCCGTTG+CGG | + | chr3_3:21223262-21223281 | Msa0446040:intron | 55.0% | |
| CCGGCGTTTCTCTTCAGTCT+TGG | + | chr3_3:21224304-21224323 | Msa0446040:CDS | 55.0% | |
| GGCGAAACTGCATAGTTGGC+AGG | - | chr3_3:21225557-21225576 | None:intergenic | 55.0% | |
| ACGTCTCCGGGGTTGTTTGC+GGG | - | chr3_3:21222368-21222387 | None:intergenic | 60.0% | |
| CACGTCTCCGGGGTTGTTTG+CGG | - | chr3_3:21222369-21222388 | None:intergenic | 60.0% | |
| GGGTGGTGACCTGCAATAGC+AGG | + | chr3_3:21223426-21223445 | Msa0446040:intron | 60.0% | |
| TCTCCGGGGTTGTTTGCGGG+AGG | - | chr3_3:21222365-21222384 | None:intergenic | 65.0% | |
| ACGCGGTTGCGATGCCGTTG+CGG | + | chr3_3:21223218-21223237 | Msa0446040:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 21221058 | 21226307 | 21221058 | ID=Msa0446040;Name=Msa0446040 |
| chr3_3 | mRNA | 21221058 | 21226307 | 21221058 | ID=Msa0446040-mRNA-1;Parent=Msa0446040;Name=Msa0446040-mRNA-1;_AED=0.04;_eAED=0.04;_QI=629|1|1|1|0.66|0.5|4|160|669 |
| chr3_3 | exon | 21221058 | 21221256 | 21221058 | ID=Msa0446040-mRNA-1:exon:4449;Parent=Msa0446040-mRNA-1 |
| chr3_3 | exon | 21221784 | 21223117 | 21221784 | ID=Msa0446040-mRNA-1:exon:4450;Parent=Msa0446040-mRNA-1 |
| chr3_3 | exon | 21224302 | 21224723 | 21224302 | ID=Msa0446040-mRNA-1:exon:4451;Parent=Msa0446040-mRNA-1 |
| chr3_3 | exon | 21225464 | 21226307 | 21225464 | ID=Msa0446040-mRNA-1:exon:4452;Parent=Msa0446040-mRNA-1 |
| chr3_3 | five_prime_UTR | 21221058 | 21221256 | 21221058 | ID=Msa0446040-mRNA-1:five_prime_utr;Parent=Msa0446040-mRNA-1 |
| chr3_3 | five_prime_UTR | 21221784 | 21222213 | 21221784 | ID=Msa0446040-mRNA-1:five_prime_utr;Parent=Msa0446040-mRNA-1 |
| chr3_3 | CDS | 21222214 | 21223117 | 21222214 | ID=Msa0446040-mRNA-1:cds;Parent=Msa0446040-mRNA-1 |
| chr3_3 | CDS | 21224302 | 21224723 | 21224302 | ID=Msa0446040-mRNA-1:cds;Parent=Msa0446040-mRNA-1 |
| chr3_3 | CDS | 21225464 | 21226147 | 21225464 | ID=Msa0446040-mRNA-1:cds;Parent=Msa0446040-mRNA-1 |
| chr3_3 | three_prime_UTR | 21226148 | 21226307 | 21226148 | ID=Msa0446040-mRNA-1:three_prime_utr;Parent=Msa0446040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
