Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0623330 | XP_003604340.1 | 98.077 | 208 | 4 | 0 | 1 | 208 | 1 | 208 | 3.00e-152 | 430 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0623330 | G7JGU4 | 98.077 | 208 | 4 | 0 | 1 | 208 | 1 | 208 | 1.43e-152 | 430 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa0623330 | 0.800493 | 1.404699e-48 | -8.615850e-47 |
| Msa0003720 | Msa0623330 | 0.811001 | 8.706688e-51 | -8.615850e-47 |
| Msa0007970 | Msa0623330 | 0.801549 | 8.544719e-49 | -8.615850e-47 |
| Msa0011500 | Msa0623330 | 0.801459 | 8.913946e-49 | -8.615850e-47 |
| Msa0014570 | Msa0623330 | 0.814436 | 1.542543e-51 | -8.615850e-47 |
| Msa0017510 | Msa0623330 | 0.818900 | 1.539593e-52 | -8.615850e-47 |
| Msa0027820 | Msa0623330 | 0.805246 | 1.464203e-49 | -8.615850e-47 |
| Msa0028420 | Msa0623330 | 0.810144 | 1.333575e-50 | -8.615850e-47 |
| Msa0032920 | Msa0623330 | -0.812364 | 4.400802e-51 | -8.615850e-47 |
| Msa0049790 | Msa0623330 | 0.803114 | 4.068139e-49 | -8.615850e-47 |
| Msa0061340 | Msa0623330 | 0.824890 | 6.317930e-54 | -8.615850e-47 |
| Msa0068680 | Msa0623330 | 0.800504 | 1.397202e-48 | -8.615850e-47 |
| Msa0074240 | Msa0623330 | 0.836594 | 8.541980e-57 | -8.615850e-47 |
| Msa0076250 | Msa0623330 | 0.805442 | 1.332122e-49 | -8.615850e-47 |
| Msa0081520 | Msa0623330 | 0.857155 | 1.978191e-62 | -8.615850e-47 |
| Msa0089630 | Msa0623330 | 0.820603 | 6.285379e-53 | -8.615850e-47 |
| Msa0093850 | Msa0623330 | 0.815446 | 9.208677e-52 | -8.615850e-47 |
| Msa0094120 | Msa0623330 | 0.802268 | 6.079979e-49 | -8.615850e-47 |
| Msa0094850 | Msa0623330 | 0.843292 | 1.532804e-58 | -8.615850e-47 |
| Msa0110970 | Msa0623330 | 0.819716 | 1.003791e-52 | -8.615850e-47 |
| Msa0115160 | Msa0623330 | 0.805987 | 1.023532e-49 | -8.615850e-47 |
| Msa0118570 | Msa0623330 | 0.811105 | 8.267921e-51 | -8.615850e-47 |
| Msa0120400 | Msa0623330 | 0.800558 | 1.362286e-48 | -8.615850e-47 |
| Msa0615420 | Msa0623330 | 0.801337 | 9.444484e-49 | -8.615850e-47 |
| Msa0623330 | Msa0625720 | 0.808152 | 3.563402e-50 | -8.615850e-47 |
| Msa0623330 | Msa0626450 | 0.856907 | 2.342300e-62 | -8.615850e-47 |
| Msa0623330 | Msa0626490 | 0.854667 | 1.056426e-61 | -8.615850e-47 |
| Msa0623330 | Msa0626510 | 0.914279 | 2.308860e-84 | -8.615850e-47 |
| Msa0623330 | Msa0638480 | 0.825225 | 5.265372e-54 | -8.615850e-47 |
| Msa0623330 | Msa0639430 | 0.813421 | 2.581132e-51 | -8.615850e-47 |
| Msa0623330 | Msa0641210 | 0.803765 | 2.981795e-49 | -8.615850e-47 |
| Msa0623330 | Msa0662240 | 0.803499 | 3.386472e-49 | -8.615850e-47 |
| Msa0623330 | Msa0662340 | 0.801458 | 8.918902e-49 | -8.615850e-47 |
| Msa0623330 | Msa0663390 | 0.808944 | 2.414119e-50 | -8.615850e-47 |
| Msa0623330 | Msa0664600 | 0.856150 | 3.907589e-62 | -8.615850e-47 |
| Msa0623330 | Msa0664910 | 0.931557 | 3.169024e-94 | -8.615850e-47 |
| Msa0623330 | Msa0682330 | 0.833103 | 6.463682e-56 | -8.615850e-47 |
| Msa0623330 | Msa0683570 | 0.803450 | 3.466745e-49 | -8.615850e-47 |
| Msa0623330 | Msa0697160 | 0.822646 | 2.119728e-53 | -8.615850e-47 |
| Msa0623330 | Msa0698640 | 0.816608 | 5.066608e-52 | -8.615850e-47 |
| Msa0623330 | Msa0710800 | 0.821054 | 4.949765e-53 | -8.615850e-47 |
| Msa0623330 | Msa0723990 | 0.804060 | 2.589167e-49 | -8.615850e-47 |
| Msa0623330 | Msa0727640 | 0.822575 | 2.201790e-53 | -8.615850e-47 |
| Msa0623330 | Msa0727710 | 0.828380 | 9.286449e-55 | -8.615850e-47 |
| Msa0623330 | Msa0730430 | 0.819410 | 1.178549e-52 | -8.615850e-47 |
| Msa0623330 | Msa0736960 | 0.836927 | 7.023818e-57 | -8.615850e-47 |
| Msa0623330 | Msa0737570 | 0.803543 | 3.315433e-49 | -8.615850e-47 |
| Msa0623330 | Msa0741240 | 0.810203 | 1.295689e-50 | -8.615850e-47 |
| Msa0623330 | Msa0742740 | 0.809703 | 1.659375e-50 | -8.615850e-47 |
| Msa0623330 | Msa0751260 | 0.800622 | 1.321847e-48 | -8.615850e-47 |
| Msa0623330 | Msa0765240 | 0.805484 | 1.305306e-49 | -8.615850e-47 |
| Msa0623330 | Msa0767300 | 0.807905 | 4.022211e-50 | -8.615850e-47 |
| Msa0623330 | Msa0768990 | 0.800284 | 1.549171e-48 | -8.615850e-47 |
| Msa0623330 | Msa0778590 | 0.813833 | 2.095729e-51 | -8.615850e-47 |
| Msa0623330 | Msa0780270 | 0.806607 | 7.577500e-50 | -8.615850e-47 |
| Msa0623330 | Msa0785210 | 0.811745 | 6.002262e-51 | -8.615850e-47 |
| Msa0623330 | Msa0795070 | 0.811317 | 7.438519e-51 | -8.615850e-47 |
| Msa0623330 | Msa0795870 | 0.802178 | 6.346696e-49 | -8.615850e-47 |
| Msa0623330 | Msa0815960 | 0.806327 | 8.679741e-50 | -8.615850e-47 |
| Msa0623330 | Msa0821760 | 0.803848 | 2.866047e-49 | -8.615850e-47 |
| Msa0623330 | Msa0823820 | 0.827146 | 1.838137e-54 | -8.615850e-47 |
| Msa0623330 | Msa0824660 | 0.805459 | 1.321198e-49 | -8.615850e-47 |
| Msa0623330 | Msa0826130 | 0.804901 | 1.729224e-49 | -8.615850e-47 |
| Msa0623330 | Msa0828560 | 0.851995 | 6.171703e-61 | -8.615850e-47 |
| Msa0623330 | Msa0832120 | 0.800813 | 1.208556e-48 | -8.615850e-47 |
| Msa0623330 | Msa0833220 | 0.805683 | 1.186141e-49 | -8.615850e-47 |
| Msa0623330 | Msa0856920 | 0.801946 | 7.081837e-49 | -8.615850e-47 |
| Msa0623330 | Msa0861510 | 0.866214 | 3.358702e-65 | -8.615850e-47 |
| Msa0623330 | Msa0861530 | 0.851001 | 1.178899e-60 | -8.615850e-47 |
| Msa0623330 | Msa0861600 | 0.868198 | 7.800871e-66 | -8.615850e-47 |
| Msa0623330 | Msa0861870 | 0.822780 | 1.972358e-53 | -8.615850e-47 |
| Msa0623330 | Msa0863010 | 0.823809 | 1.134178e-53 | -8.615850e-47 |
| Msa0623330 | Msa0863930 | 0.806599 | 7.605791e-50 | -8.615850e-47 |
| Msa0623330 | Msa0866520 | 0.859212 | 4.834638e-63 | -8.615850e-47 |
| Msa0623330 | Msa0875290 | 0.812608 | 3.891943e-51 | -8.615850e-47 |
| Msa0623330 | Msa0878510 | 0.803198 | 3.907953e-49 | -8.615850e-47 |
| Msa0623330 | Msa0880140 | 0.816421 | 5.577277e-52 | -8.615850e-47 |
| Msa0623330 | Msa0926470 | 0.801315 | 9.540899e-49 | -8.615850e-47 |
| Msa0623330 | Msa0930780 | 0.804600 | 1.998480e-49 | -8.615850e-47 |
| Msa0623330 | Msa0967380 | 0.821913 | 3.134839e-53 | -8.615850e-47 |
| Msa0623330 | Msa0967870 | 0.822868 | 1.881155e-53 | -8.615850e-47 |
| Msa0623330 | Msa0972100 | 0.830966 | 2.180380e-55 | -8.615850e-47 |
| Msa0623330 | Msa0974060 | 0.811807 | 5.820528e-51 | -8.615850e-47 |
| Msa0623330 | Msa1005870 | 0.808870 | 2.504258e-50 | -8.615850e-47 |
| Msa0623330 | Msa1007270 | 0.811937 | 5.452454e-51 | -8.615850e-47 |
| Msa0623330 | Msa1019000 | 0.805927 | 1.053905e-49 | -8.615850e-47 |
| Msa0623330 | Msa1019430 | 0.830420 | 2.966396e-55 | -8.615850e-47 |
| Msa0623330 | Msa1019470 | 0.828484 | 8.763647e-55 | -8.615850e-47 |
| Msa0623330 | Msa1020510 | 0.800417 | 1.455787e-48 | -8.615850e-47 |
| Msa0623330 | Msa1020630 | 0.825257 | 5.173099e-54 | -8.615850e-47 |
| Msa0623330 | Msa1020670 | 0.802896 | 4.513337e-49 | -8.615850e-47 |
| Msa0623330 | Msa1023500 | 0.803328 | 3.673434e-49 | -8.615850e-47 |
| Msa0623330 | Msa1024740 | 0.813867 | 2.059523e-51 | -8.615850e-47 |
| Msa0623330 | Msa1031930 | 0.872906 | 2.217480e-67 | -8.615850e-47 |
| Msa0623330 | Msa1035960 | 0.809920 | 1.490305e-50 | -8.615850e-47 |
| Msa0623330 | Msa1045140 | 0.813317 | 2.720744e-51 | -8.615850e-47 |
| Msa0623330 | Msa1048920 | 0.845786 | 3.267314e-59 | -8.615850e-47 |
| Msa0623330 | Msa1050910 | 0.818447 | 1.951402e-52 | -8.615850e-47 |
| Msa0623330 | Msa1050960 | 0.806213 | 9.173478e-50 | -8.615850e-47 |
| Msa0623330 | Msa1051830 | 0.811217 | 7.817393e-51 | -8.615850e-47 |
| Msa0623330 | Msa1059960 | 0.803188 | 3.926879e-49 | -8.615850e-47 |
| Msa0623330 | Msa1066490 | 0.825490 | 4.556377e-54 | -8.615850e-47 |
| Msa0623330 | Msa1071770 | 0.836086 | 1.149807e-56 | -8.615850e-47 |
| Msa0623330 | Msa1078170 | 0.814665 | 1.372369e-51 | -8.615850e-47 |
| Msa0623330 | Msa1082500 | 0.813551 | 2.417506e-51 | -8.615850e-47 |
| Msa0623330 | Msa1085200 | 0.822627 | 2.140445e-53 | -8.615850e-47 |
| Msa0623330 | Msa1092010 | 0.813243 | 2.825507e-51 | -8.615850e-47 |
| Msa0623330 | Msa1093840 | 0.811944 | 5.433554e-51 | -8.615850e-47 |
| Msa0623330 | Msa1101090 | 0.802390 | 5.739732e-49 | -8.615850e-47 |
| Msa0623330 | Msa1102770 | 0.807240 | 5.567770e-50 | -8.615850e-47 |
| Msa0623330 | Msa1108790 | 0.803714 | 3.054931e-49 | -8.615850e-47 |
| Msa0623330 | Msa1113800 | 0.848153 | 7.348139e-60 | -8.615850e-47 |
| Msa0623330 | Msa1122520 | 0.808798 | 2.594991e-50 | -8.615850e-47 |
| Msa0623330 | Msa1123380 | 0.844192 | 8.800600e-59 | -8.615850e-47 |
| Msa0623330 | Msa1124110 | 0.800918 | 1.150106e-48 | -8.615850e-47 |
| Msa0623330 | Msa1132840 | 0.805707 | 1.172289e-49 | -8.615850e-47 |
| Msa0623330 | Msa1140210 | 0.813003 | 3.189072e-51 | -8.615850e-47 |
| Msa0623330 | Msa1145810 | 0.800334 | 1.513037e-48 | -8.615850e-47 |
| Msa0623330 | Msa1158830 | 0.831238 | 1.869430e-55 | -8.615850e-47 |
| Msa0623330 | Msa1160500 | 0.848192 | 7.166669e-60 | -8.615850e-47 |
| Msa0623330 | Msa1168950 | 0.800361 | 1.494515e-48 | -8.615850e-47 |
| Msa0623330 | Msa1181190 | 0.802436 | 5.616211e-49 | -8.615850e-47 |
| Msa0623330 | Msa1182770 | 0.805914 | 1.060738e-49 | -8.615850e-47 |
| Msa0623330 | Msa1184330 | 0.800346 | 1.504920e-48 | -8.615850e-47 |
| Msa0623330 | Msa1193290 | 0.811891 | 5.578640e-51 | -8.615850e-47 |
| Msa0623330 | Msa1196440 | 0.813445 | 2.550950e-51 | -8.615850e-47 |
| Msa0623330 | Msa1199570 | 0.833192 | 6.142877e-56 | -8.615850e-47 |
| Msa0623330 | Msa1205280 | 0.811235 | 7.747834e-51 | -8.615850e-47 |
| Msa0623330 | Msa1208160 | 0.832006 | 1.209328e-55 | -8.615850e-47 |
| Msa0623330 | Msa1208430 | 0.819398 | 1.186297e-52 | -8.615850e-47 |
| Msa0623330 | Msa1209460 | 0.824272 | 8.831931e-54 | -8.615850e-47 |
| Msa0623330 | Msa1221060 | 0.801714 | 7.903473e-49 | -8.615850e-47 |
| Msa0623330 | Msa1228200 | 0.822765 | 1.988453e-53 | -8.615850e-47 |
| Msa0623330 | Msa1229500 | 0.805866 | 1.085264e-49 | -8.615850e-47 |
| Msa0623330 | Msa1236410 | 0.807456 | 5.010411e-50 | -8.615850e-47 |
| Msa0623330 | Msa1239920 | 0.811365 | 7.260024e-51 | -8.615850e-47 |
| Msa0623330 | Msa1264710 | 0.804308 | 2.299639e-49 | -8.615850e-47 |
| Msa0623330 | Msa1267770 | 0.811950 | 5.416311e-51 | -8.615850e-47 |
| Msa0623330 | Msa1271990 | 0.804612 | 1.986601e-49 | -8.615850e-47 |
| Msa0623330 | Msa1276660 | 0.838099 | 3.517131e-57 | -8.615850e-47 |
| Msa0623330 | Msa1277220 | 0.808312 | 3.295292e-50 | -8.615850e-47 |
| Msa0623330 | Msa1297230 | 0.814039 | 1.886917e-51 | -8.615850e-47 |
| Msa0623330 | Msa1298370 | 0.832892 | 7.293494e-56 | -8.615850e-47 |
| Msa0623330 | Msa1298810 | 0.807140 | 5.844719e-50 | -8.615850e-47 |
| Msa0623330 | Msa1303240 | 0.800989 | 1.112693e-48 | -8.615850e-47 |
| Msa0623330 | Msa1303250 | 0.807095 | 5.974617e-50 | -8.615850e-47 |
| Msa0623330 | Msa1308140 | 0.808819 | 2.567478e-50 | -8.615850e-47 |
| Msa0623330 | Msa1314650 | 0.803507 | 3.373739e-49 | -8.615850e-47 |
| Msa0623330 | Msa1319650 | 0.805809 | 1.115670e-49 | -8.615850e-47 |
| Msa0623330 | Msa1328640 | 0.809564 | 1.777862e-50 | -8.615850e-47 |
| Msa0623330 | Msa1328710 | 0.831274 | 1.831560e-55 | -8.615850e-47 |
| Msa0623330 | Msa1330420 | 0.805460 | 1.320853e-49 | -8.615850e-47 |
| Msa0623330 | Msa1343430 | 0.802717 | 4.913385e-49 | -8.615850e-47 |
| Msa0623330 | Msa1348090 | 0.827106 | 1.878830e-54 | -8.615850e-47 |
| Msa0623330 | Msa1353470 | 0.823264 | 1.520950e-53 | -8.615850e-47 |
| Msa0623330 | Msa1356830 | 0.851415 | 9.008259e-61 | -8.615850e-47 |
| Msa0623330 | Msa1366340 | 0.813127 | 2.995080e-51 | -8.615850e-47 |
| Msa0623330 | Msa1366600 | 0.812519 | 4.070160e-51 | -8.615850e-47 |
| Msa0623330 | Msa1368430 | 0.809295 | 2.030939e-50 | -8.615850e-47 |
| Msa0623330 | Msa1369150 | 0.807384 | 5.188955e-50 | -8.615850e-47 |
| Msa0623330 | Msa1373100 | 0.811025 | 8.604257e-51 | -8.615850e-47 |
| Msa0623330 | Msa1374040 | 0.806573 | 7.702946e-50 | -8.615850e-47 |
| Msa0623330 | Msa1374060 | 0.807478 | 4.956040e-50 | -8.615850e-47 |
| Msa0623330 | Msa1382400 | 0.803436 | 3.489913e-49 | -8.615850e-47 |
| Msa0623330 | Msa1382560 | 0.808048 | 3.750129e-50 | -8.615850e-47 |
| Msa0623330 | Msa1383230 | 0.810305 | 1.231108e-50 | -8.615850e-47 |
| Msa0623330 | Msa1385890 | 0.831439 | 1.668781e-55 | -8.615850e-47 |
| Msa0623330 | Msa1386710 | 0.834311 | 3.225049e-56 | -8.615850e-47 |
| Msa0623330 | Msa1422950 | 0.810939 | 8.980616e-51 | -8.615850e-47 |
| Msa0623330 | Msa1423350 | 0.837517 | 4.960582e-57 | -8.615850e-47 |
| Msa0623330 | Msa1425880 | 0.816476 | 5.422984e-52 | -8.615850e-47 |
| Msa0623330 | Msa1437940 | 0.841448 | 4.722443e-58 | -8.615850e-47 |
| Msa0623330 | Msa1439610 | 0.818101 | 2.336730e-52 | -8.615850e-47 |
| Msa0623330 | Msa1440310 | 0.813944 | 1.980665e-51 | -8.615850e-47 |
| Msa0623330 | Msa1440960 | 0.848074 | 7.728779e-60 | -8.615850e-47 |
| Msa0623330 | Msa1442820 | 0.810332 | 1.214832e-50 | -8.615850e-47 |
| Msa0623330 | Msa1444510 | 0.812251 | 4.656362e-51 | -8.615850e-47 |
| Msa0623330 | Msa1445190 | 0.857305 | 1.786570e-62 | -8.615850e-47 |
| Msa0623330 | Msa1446810 | 0.815026 | 1.141307e-51 | -8.615850e-47 |
| Msa0623330 | Msa1451160 | 0.827152 | 1.831932e-54 | -8.615850e-47 |
| Msa0623330 | Msa1464810 | 0.819853 | 9.336285e-53 | -8.615850e-47 |
| Msa0623330 | Msa1466540 | 0.802322 | 5.926920e-49 | -8.615850e-47 |
| Msa0123100 | Msa0623330 | 0.805069 | 1.594915e-49 | -8.615850e-47 |
| Msa0124060 | Msa0623330 | 0.809145 | 2.186900e-50 | -8.615850e-47 |
| Msa0124280 | Msa0623330 | 0.801193 | 1.010581e-48 | -8.615850e-47 |
| Msa0126370 | Msa0623330 | 0.803072 | 4.151138e-49 | -8.615850e-47 |
| Msa0129940 | Msa0623330 | 0.804058 | 2.591630e-49 | -8.615850e-47 |
| Msa0131900 | Msa0623330 | 0.803807 | 2.923119e-49 | -8.615850e-47 |
| Msa0136650 | Msa0623330 | 0.809118 | 2.216077e-50 | -8.615850e-47 |
| Msa0144360 | Msa0623330 | 0.816724 | 4.770707e-52 | -8.615850e-47 |
| Msa0146280 | Msa0623330 | 0.806012 | 1.011203e-49 | -8.615850e-47 |
| Msa0152400 | Msa0623330 | 0.832462 | 9.326172e-56 | -8.615850e-47 |
| Msa0154440 | Msa0623330 | 0.805618 | 1.223929e-49 | -8.615850e-47 |
| Msa0157290 | Msa0623330 | 0.819488 | 1.131129e-52 | -8.615850e-47 |
| Msa0168500 | Msa0623330 | 0.824930 | 6.179366e-54 | -8.615850e-47 |
| Msa0173890 | Msa0623330 | 0.853600 | 2.146168e-61 | -8.615850e-47 |
| Msa0174450 | Msa0623330 | 0.821557 | 3.790924e-53 | -8.615850e-47 |
| Msa0187030 | Msa0623330 | 0.810324 | 1.219584e-50 | -8.615850e-47 |
| Msa0188150 | Msa0623330 | 0.800686 | 1.283080e-48 | -8.615850e-47 |
| Msa0206840 | Msa0623330 | 0.811067 | 8.426931e-51 | -8.615850e-47 |
| Msa0211150 | Msa0623330 | 0.803836 | 2.882604e-49 | -8.615850e-47 |
| Msa0212990 | Msa0623330 | 0.811430 | 7.030711e-51 | -8.615850e-47 |
| Msa0218810 | Msa0623330 | 0.807405 | 5.137926e-50 | -8.615850e-47 |
| Msa0221000 | Msa0623330 | 0.833581 | 4.912086e-56 | -8.615850e-47 |
| Msa0225100 | Msa0623330 | 0.828804 | 7.335072e-55 | -8.615850e-47 |
| Msa0225460 | Msa0623330 | 0.808406 | 3.146564e-50 | -8.615850e-47 |
| Msa0225680 | Msa0623330 | 0.819830 | 9.449055e-53 | -8.615850e-47 |
| Msa0225860 | Msa0623330 | 0.821629 | 3.647214e-53 | -8.615850e-47 |
| Msa0227470 | Msa0623330 | 0.800563 | 1.359208e-48 | -8.615850e-47 |
| Msa0365100 | Msa0623330 | 0.835860 | 1.312324e-56 | -8.615850e-47 |
| Msa0367870 | Msa0623330 | 0.818103 | 2.333707e-52 | -8.615850e-47 |
| Msa0371030 | Msa0623330 | 0.809292 | 2.033180e-50 | -8.615850e-47 |
| Msa0371170 | Msa0623330 | 0.803155 | 3.990169e-49 | -8.615850e-47 |
| Msa0376350 | Msa0623330 | 0.808573 | 2.898237e-50 | -8.615850e-47 |
| Msa0376630 | Msa0623330 | 0.817059 | 4.013833e-52 | -8.615850e-47 |
| Msa0378720 | Msa0623330 | 0.862302 | 5.578016e-64 | -8.615850e-47 |
| Msa0388770 | Msa0623330 | 0.826623 | 2.450990e-54 | -8.615850e-47 |
| Msa0388960 | Msa0623330 | 0.801675 | 8.050584e-49 | -8.615850e-47 |
| Msa0392510 | Msa0623330 | 0.815084 | 1.107952e-51 | -8.615850e-47 |
| Msa0393440 | Msa0623330 | 0.818283 | 2.125436e-52 | -8.615850e-47 |
| Msa0405130 | Msa0623330 | 0.805048 | 1.610977e-49 | -8.615850e-47 |
| Msa0406770 | Msa0623330 | 0.816661 | 4.929338e-52 | -8.615850e-47 |
| Msa0410500 | Msa0623330 | 0.819204 | 1.312815e-52 | -8.615850e-47 |
| Msa0410650 | Msa0623330 | 0.824987 | 5.991613e-54 | -8.615850e-47 |
| Msa0417880 | Msa0623330 | 0.828323 | 9.585081e-55 | -8.615850e-47 |
| Msa0422850 | Msa0623330 | 0.816097 | 6.591421e-52 | -8.615850e-47 |
| Msa0422930 | Msa0623330 | 0.816674 | 4.897200e-52 | -8.615850e-47 |
| Msa0424790 | Msa0623330 | 0.801529 | 8.624105e-49 | -8.615850e-47 |
| Msa0427100 | Msa0623330 | 0.815191 | 1.049267e-51 | -8.615850e-47 |
| Msa0427120 | Msa0623330 | 0.827641 | 1.398549e-54 | -8.615850e-47 |
| Msa0428370 | Msa0623330 | 0.818458 | 1.939923e-52 | -8.615850e-47 |
| Msa0430260 | Msa0623330 | 0.812633 | 3.842268e-51 | -8.615850e-47 |
| Msa0432380 | Msa0623330 | 0.814272 | 1.676697e-51 | -8.615850e-47 |
| Msa0437560 | Msa0623330 | 0.804259 | 2.354137e-49 | -8.615850e-47 |
| Msa0440750 | Msa0623330 | 0.816443 | 5.515675e-52 | -8.615850e-47 |
| Msa0447370 | Msa0623330 | 0.827424 | 1.576598e-54 | -8.615850e-47 |
| Msa0450720 | Msa0623330 | 0.821018 | 5.047097e-53 | -8.615850e-47 |
| Msa0451070 | Msa0623330 | 0.803642 | 3.162327e-49 | -8.615850e-47 |
| Msa0452710 | Msa0623330 | 0.812580 | 3.946654e-51 | -8.615850e-47 |
| Msa0457470 | Msa0623330 | 0.800570 | 1.354650e-48 | -8.615850e-47 |
| Msa0464680 | Msa0623330 | 0.815447 | 9.202700e-52 | -8.615850e-47 |
| Msa0467430 | Msa0623330 | 0.825594 | 4.305891e-54 | -8.615850e-47 |
| Msa0473500 | Msa0623330 | 0.817581 | 3.061714e-52 | -8.615850e-47 |
| Msa0474730 | Msa0623330 | 0.850625 | 1.504611e-60 | -8.615850e-47 |
| Msa0475790 | Msa0623330 | 0.811702 | 6.135217e-51 | -8.615850e-47 |
| Msa0479170 | Msa0623330 | 0.838476 | 2.811055e-57 | -8.615850e-47 |
| Msa0479200 | Msa0623330 | 0.828846 | 7.163757e-55 | -8.615850e-47 |
| Msa0481530 | Msa0623330 | 0.810196 | 1.299623e-50 | -8.615850e-47 |
| Msa0244860 | Msa0623330 | 0.803070 | 4.153902e-49 | -8.615850e-47 |
| Msa0253290 | Msa0623330 | 0.804366 | 2.236564e-49 | -8.615850e-47 |
| Msa0258310 | Msa0623330 | 0.849000 | 4.281033e-60 | -8.615850e-47 |
| Msa0259500 | Msa0623330 | 0.810743 | 9.901126e-51 | -8.615850e-47 |
| Msa0261340 | Msa0623330 | 0.813787 | 2.144441e-51 | -8.615850e-47 |
| Msa0263080 | Msa0623330 | 0.801395 | 9.189192e-49 | -8.615850e-47 |
| Msa0265850 | Msa0623330 | 0.819400 | 1.185063e-52 | -8.615850e-47 |
| Msa0266180 | Msa0623330 | 0.821996 | 2.999578e-53 | -8.615850e-47 |
| Msa0267920 | Msa0623330 | 0.814775 | 1.297516e-51 | -8.615850e-47 |
| Msa0277450 | Msa0623330 | 0.823745 | 1.174227e-53 | -8.615850e-47 |
| Msa0284410 | Msa0623330 | 0.823919 | 1.068856e-53 | -8.615850e-47 |
| Msa0287650 | Msa0623330 | 0.802314 | 5.950862e-49 | -8.615850e-47 |
| Msa0287740 | Msa0623330 | 0.831549 | 1.567878e-55 | -8.615850e-47 |
| Msa0292120 | Msa0623330 | 0.805007 | 1.643336e-49 | -8.615850e-47 |
| Msa0292400 | Msa0623330 | 0.840443 | 8.668928e-58 | -8.615850e-47 |
| Msa0297790 | Msa0623330 | 0.846412 | 2.208075e-59 | -8.615850e-47 |
| Msa0300270 | Msa0623330 | 0.864753 | 9.689500e-65 | -8.615850e-47 |
| Msa0300320 | Msa0623330 | 0.870746 | 1.156225e-66 | -8.615850e-47 |
| Msa0300690 | Msa0623330 | 0.815380 | 9.521616e-52 | -8.615850e-47 |
| Msa0302170 | Msa0623330 | 0.803034 | 4.226067e-49 | -8.615850e-47 |
| Msa0317160 | Msa0623330 | 0.808896 | 2.472082e-50 | -8.615850e-47 |
| Msa0322900 | Msa0623330 | 0.803254 | 3.805463e-49 | -8.615850e-47 |
| Msa0330340 | Msa0623330 | 0.808915 | 2.449039e-50 | -8.615850e-47 |
| Msa0332000 | Msa0623330 | 0.802064 | 6.697647e-49 | -8.615850e-47 |
| Msa0335800 | Msa0623330 | 0.833450 | 5.296124e-56 | -8.615850e-47 |
| Msa0337700 | Msa0623330 | 0.850627 | 1.502820e-60 | -8.615850e-47 |
| Msa0338210 | Msa0623330 | 0.826409 | 2.756013e-54 | -8.615850e-47 |
| Msa0339500 | Msa0623330 | 0.826362 | 2.827846e-54 | -8.615850e-47 |
| Msa0341540 | Msa0623330 | 0.800307 | 1.532276e-48 | -8.615850e-47 |
| Msa0341690 | Msa0623330 | 0.823027 | 1.727971e-53 | -8.615850e-47 |
| Msa0345330 | Msa0623330 | 0.828613 | 8.156791e-55 | -8.615850e-47 |
| Msa0345410 | Msa0623330 | 0.823183 | 1.588470e-53 | -8.615850e-47 |
| Msa0357990 | Msa0623330 | 0.806122 | 9.588363e-50 | -8.615850e-47 |
| Msa0358890 | Msa0623330 | 0.844061 | 9.542632e-59 | -8.615850e-47 |
| Msa0360210 | Msa0623330 | 0.815850 | 7.484096e-52 | -8.615850e-47 |
| Msa0363200 | Msa0623330 | 0.826834 | 2.182342e-54 | -8.615850e-47 |
| Msa0488560 | Msa0623330 | 0.800034 | 1.741604e-48 | -8.615850e-47 |
| Msa0488790 | Msa0623330 | 0.827965 | 1.168720e-54 | -8.615850e-47 |
| Msa0495320 | Msa0623330 | 0.802648 | 5.077491e-49 | -8.615850e-47 |
| Msa0498060 | Msa0623330 | 0.846971 | 1.552858e-59 | -8.615850e-47 |
| Msa0498450 | Msa0623330 | 0.808845 | 2.535425e-50 | -8.615850e-47 |
| Msa0500380 | Msa0623330 | 0.800628 | 1.318076e-48 | -8.615850e-47 |
| Msa0507680 | Msa0623330 | 0.822648 | 2.117325e-53 | -8.615850e-47 |
| Msa0509610 | Msa0623330 | 0.805111 | 1.563103e-49 | -8.615850e-47 |
| Msa0513160 | Msa0623330 | 0.857436 | 1.634842e-62 | -8.615850e-47 |
| Msa0516170 | Msa0623330 | 0.802186 | 6.322625e-49 | -8.615850e-47 |
| Msa0527190 | Msa0623330 | 0.803323 | 3.683303e-49 | -8.615850e-47 |
| Msa0529890 | Msa0623330 | 0.810878 | 9.258226e-51 | -8.615850e-47 |
| Msa0544660 | Msa0623330 | 0.835041 | 2.113010e-56 | -8.615850e-47 |
| Msa0546680 | Msa0623330 | 0.827796 | 1.283468e-54 | -8.615850e-47 |
| Msa0547720 | Msa0623330 | 0.807400 | 5.148968e-50 | -8.615850e-47 |
| Msa0573380 | Msa0623330 | 0.826899 | 2.105536e-54 | -8.615850e-47 |
| Msa0574390 | Msa0623330 | 0.807225 | 5.609492e-50 | -8.615850e-47 |
| Msa0574890 | Msa0623330 | 0.825781 | 3.887861e-54 | -8.615850e-47 |
| Msa0579660 | Msa0623330 | 0.800997 | 1.108160e-48 | -8.615850e-47 |
| Msa0580370 | Msa0623330 | 0.801882 | 7.301057e-49 | -8.615850e-47 |
| Msa0581690 | Msa0623330 | 0.803522 | 3.349712e-49 | -8.615850e-47 |
| Msa0585560 | Msa0623330 | 0.811871 | 5.637583e-51 | -8.615850e-47 |
| Msa0589510 | Msa0623330 | 0.803582 | 3.254537e-49 | -8.615850e-47 |
| Msa0597790 | Msa0623330 | 0.806309 | 8.757313e-50 | -8.615850e-47 |
| Msa0601950 | Msa0623330 | 0.838169 | 3.372494e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0623330 | MtrunA17_Chr4g0003001 | 98.077 | 208 | 4 | 0 | 1 | 208 | 58 | 265 | 4.69e-156 | 432 |
| Msa0623330 | MtrunA17_Chr2g0333351 | 60.000 | 220 | 65 | 10 | 1 | 208 | 1 | 209 | 4.15e-76 | 228 |
| Msa0623330 | MtrunA17_Chr4g0064971 | 48.000 | 150 | 67 | 4 | 1 | 149 | 1 | 140 | 5.53e-35 | 124 |
| Msa0623330 | MtrunA17_Chr2g0304551 | 61.290 | 93 | 33 | 2 | 1 | 92 | 1 | 91 | 3.05e-31 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0623330 | AT1G15760.1 | 49.545 | 220 | 73 | 10 | 3 | 207 | 5 | 201 | 5.17e-59 | 184 |
| Msa0623330 | AT1G80520.1 | 50.926 | 216 | 72 | 10 | 1 | 207 | 1 | 191 | 3.07e-51 | 164 |
| Msa0623330 | AT2G12462.1 | 30.709 | 254 | 123 | 9 | 1 | 207 | 1 | 248 | 6.01e-27 | 103 |
Find 44 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATCTCTTGTATATGAGTA+TGG | 0.307188 | 4_3:+534396 | Msa0623330:CDS |
| CCATGCTTTGGAGAAATTCA+TGG | 0.323501 | 4_3:-534470 | None:intergenic |
| GCTAGTAGTAGTAGTTATTA+TGG | 0.324043 | 4_3:+534693 | Msa0623330:CDS |
| AAACTTGCAAGAAAAGAAAA+AGG | 0.339805 | 4_3:+534528 | Msa0623330:CDS |
| GAGAATTTCTAGCCTGTGTT+TGG | 0.345241 | 4_3:-534505 | None:intergenic |
| CTATGGAGATTCCCATGCTT+TGG | 0.347816 | 4_3:-534482 | None:intergenic |
| ATGATCTTTGCCATTGGTCT+TGG | 0.351786 | 4_3:-534564 | None:intergenic |
| ATCATGATAGCAATGGTTAT+TGG | 0.385458 | 4_3:+534901 | Msa0623330:CDS |
| CAACCATGGATTGGTTCTCT+TGG | 0.390859 | 4_3:+534352 | None:intergenic |
| ATCTTTGCCATTGGTCTTGG+TGG | 0.398986 | 4_3:-534561 | None:intergenic |
| CAGCTGCTGTTGAAGATATC+AGG | 0.407684 | 4_3:+534925 | Msa0623330:CDS |
| TTCTAGCCTGTGTTTGGCTA+TGG | 0.411531 | 4_3:-534499 | None:intergenic |
| GCTCCCATGATCTTTGCCAT+TGG | 0.442339 | 4_3:-534570 | None:intergenic |
| GAGAGGCTGTTGCTTACAAA+TGG | 0.465042 | 4_3:+534780 | Msa0623330:CDS |
| AAGACCAATGGCAAAGATCA+TGG | 0.469365 | 4_3:+534566 | Msa0623330:CDS |
| GCAGGCATCATTGAAGGACT+AGG | 0.479985 | 4_3:-534807 | None:intergenic |
| TTGTTGTAGTTCCAACATCA+AGG | 0.486008 | 4_3:+534670 | Msa0623330:CDS |
| GAAGAGGAATAAGAAGTTGA+AGG | 0.494849 | 4_3:+534746 | Msa0623330:CDS |
| TAACTACATAATGAGAAAGT+TGG | 0.500944 | 4_3:+534620 | Msa0623330:CDS |
| TCAACTTACCAACCATGGAT+TGG | 0.503114 | 4_3:+534343 | None:intergenic |
| GCAAGAGCAGGCATCATTGA+AGG | 0.509469 | 4_3:-534813 | None:intergenic |
| CATATACAAGAGATGGATCA+AGG | 0.528896 | 4_3:-534389 | None:intergenic |
| CTACTACTAGCCCTTGATGT+TGG | 0.534119 | 4_3:-534681 | None:intergenic |
| TTTCATGAAGGAAAGATGAA+AGG | 0.538904 | 4_3:+534873 | Msa0623330:CDS |
| CCATGAATTTCTCCAAAGCA+TGG | 0.539592 | 4_3:+534470 | Msa0623330:CDS |
| CCATACTCATATACAAGAGA+TGG | 0.559337 | 4_3:-534396 | None:intergenic |
| AGACCAATGGCAAAGATCAT+GGG | 0.562788 | 4_3:+534567 | Msa0623330:CDS |
| GAGGAATAAGAAGTTGAAGG+TGG | 0.566010 | 4_3:+534749 | Msa0623330:CDS |
| CATGAATTTCTCCAAAGCAT+GGG | 0.566734 | 4_3:+534471 | Msa0623330:CDS |
| CAGGCATCATTGAAGGACTA+GGG | 0.582193 | 4_3:-534806 | None:intergenic |
| GAGACAACCACCAAGACCAA+TGG | 0.584520 | 4_3:+534554 | Msa0623330:CDS |
| TCATGAAAATGATAAACCAT+AGG | 0.596177 | 4_3:-534858 | None:intergenic |
| GGAAGAGTTCTGTTGTGAAG+AGG | 0.606689 | 4_3:+534730 | Msa0623330:CDS |
| AAACTATCAAGAGCAAGAGC+AGG | 0.606845 | 4_3:-534825 | None:intergenic |
| TGTTGTAGTTCCAACATCAA+GGG | 0.608033 | 4_3:+534671 | Msa0623330:CDS |
| CTGCTGTTGAAGATATCAGG+TGG | 0.617099 | 4_3:+534928 | Msa0623330:CDS |
| GGAGATGATCATGATAGCAA+TGG | 0.631701 | 4_3:+534894 | Msa0623330:CDS |
| GCTCATTGTGTGCAAAAGTG+AGG | 0.635769 | 4_3:-534419 | None:intergenic |
| TGCTGTTGAAGATATCAGGT+GGG | 0.636800 | 4_3:+534929 | Msa0623330:CDS |
| AAGCCAAGAGAACCAATCCA+TGG | 0.643677 | 4_3:-534355 | None:intergenic |
| ATTATGGAACAAGATCATCA+TGG | 0.658028 | 4_3:+534709 | Msa0623330:CDS |
| TGAGCTAGAACAAGAAGACA+TGG | 0.668504 | 4_3:+534437 | Msa0623330:CDS |
| GAATCTCCATAGCCAAACAC+AGG | 0.676222 | 4_3:+534493 | Msa0623330:CDS |
| TGAAGGTGGATAAACAAGAG+AGG | 0.697861 | 4_3:+534763 | Msa0623330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAACTTGCAAGAAAAGAAAA+AGG | + | chr4_3:534528-534547 | Msa0623330:CDS | 25.0% |
| !!! | AAAAAGACAAAAAAGTGCTT+AGG | + | chr4_3:534597-534616 | Msa0623330:CDS | 25.0% |
| ! | TAACTACATAATGAGAAAGT+TGG | + | chr4_3:534620-534639 | Msa0623330:CDS | 25.0% |
| ! | TCATGAAAATGATAAACCAT+AGG | - | chr4_3:534861-534880 | None:intergenic | 25.0% |
| !! | ATGGTTTATCATTTTCATGA+AGG | + | chr4_3:534861-534880 | Msa0623330:CDS | 25.0% |
| GCTAGTAGTAGTAGTTATTA+TGG | + | chr4_3:534693-534712 | Msa0623330:CDS | 30.0% | |
| ATTATGGAACAAGATCATCA+TGG | + | chr4_3:534709-534728 | Msa0623330:CDS | 30.0% | |
| ! | TAGTTTTTGTAGTACTCCTA+TGG | + | chr4_3:534842-534861 | Msa0623330:CDS | 30.0% |
| TTTCATGAAGGAAAGATGAA+AGG | + | chr4_3:534873-534892 | Msa0623330:CDS | 30.0% | |
| ATCATGATAGCAATGGTTAT+TGG | + | chr4_3:534901-534920 | Msa0623330:CDS | 30.0% | |
| CATATACAAGAGATGGATCA+AGG | - | chr4_3:534392-534411 | None:intergenic | 35.0% | |
| CCATACTCATATACAAGAGA+TGG | - | chr4_3:534399-534418 | None:intergenic | 35.0% | |
| CCATCTCTTGTATATGAGTA+TGG | + | chr4_3:534396-534415 | Msa0623330:CDS | 35.0% | |
| CATGAATTTCTCCAAAGCAT+GGG | + | chr4_3:534471-534490 | Msa0623330:CDS | 35.0% | |
| TTGTTGTAGTTCCAACATCA+AGG | + | chr4_3:534670-534689 | Msa0623330:CDS | 35.0% | |
| TGTTGTAGTTCCAACATCAA+GGG | + | chr4_3:534671-534690 | Msa0623330:CDS | 35.0% | |
| GAAGAGGAATAAGAAGTTGA+AGG | + | chr4_3:534746-534765 | Msa0623330:CDS | 35.0% | |
| TGAGCTAGAACAAGAAGACA+TGG | + | chr4_3:534437-534456 | Msa0623330:CDS | 40.0% | |
| !! | CCATGCTTTGGAGAAATTCA+TGG | - | chr4_3:534473-534492 | None:intergenic | 40.0% |
| CCATGAATTTCTCCAAAGCA+TGG | + | chr4_3:534470-534489 | Msa0623330:CDS | 40.0% | |
| !! | GAGAATTTCTAGCCTGTGTT+TGG | - | chr4_3:534508-534527 | None:intergenic | 40.0% |
| ! | ATGATCTTTGCCATTGGTCT+TGG | - | chr4_3:534567-534586 | None:intergenic | 40.0% |
| AAGACCAATGGCAAAGATCA+TGG | + | chr4_3:534566-534585 | Msa0623330:CDS | 40.0% | |
| AGACCAATGGCAAAGATCAT+GGG | + | chr4_3:534567-534586 | Msa0623330:CDS | 40.0% | |
| GAGGAATAAGAAGTTGAAGG+TGG | + | chr4_3:534749-534768 | Msa0623330:CDS | 40.0% | |
| TGAAGGTGGATAAACAAGAG+AGG | + | chr4_3:534763-534782 | Msa0623330:CDS | 40.0% | |
| AAACTATCAAGAGCAAGAGC+AGG | - | chr4_3:534828-534847 | None:intergenic | 40.0% | |
| GGAGATGATCATGATAGCAA+TGG | + | chr4_3:534894-534913 | Msa0623330:CDS | 40.0% | |
| TGCTGTTGAAGATATCAGGT+GGG | + | chr4_3:534929-534948 | Msa0623330:CDS | 40.0% | |
| GCTCATTGTGTGCAAAAGTG+AGG | - | chr4_3:534422-534441 | None:intergenic | 45.0% | |
| CTATGGAGATTCCCATGCTT+TGG | - | chr4_3:534485-534504 | None:intergenic | 45.0% | |
| GAATCTCCATAGCCAAACAC+AGG | + | chr4_3:534493-534512 | Msa0623330:CDS | 45.0% | |
| TTCTAGCCTGTGTTTGGCTA+TGG | - | chr4_3:534502-534521 | None:intergenic | 45.0% | |
| !! | ATCTTTGCCATTGGTCTTGG+TGG | - | chr4_3:534564-534583 | None:intergenic | 45.0% |
| CTACTACTAGCCCTTGATGT+TGG | - | chr4_3:534684-534703 | None:intergenic | 45.0% | |
| GGAAGAGTTCTGTTGTGAAG+AGG | + | chr4_3:534730-534749 | Msa0623330:CDS | 45.0% | |
| ! | GAGAGGCTGTTGCTTACAAA+TGG | + | chr4_3:534780-534799 | Msa0623330:CDS | 45.0% |
| CAGGCATCATTGAAGGACTA+GGG | - | chr4_3:534809-534828 | None:intergenic | 45.0% | |
| CAGCTGCTGTTGAAGATATC+AGG | + | chr4_3:534925-534944 | Msa0623330:CDS | 45.0% | |
| CTGCTGTTGAAGATATCAGG+TGG | + | chr4_3:534928-534947 | Msa0623330:CDS | 45.0% | |
| GAGACAACCACCAAGACCAA+TGG | + | chr4_3:534554-534573 | Msa0623330:CDS | 50.0% | |
| GCTCCCATGATCTTTGCCAT+TGG | - | chr4_3:534573-534592 | None:intergenic | 50.0% | |
| GCAGGCATCATTGAAGGACT+AGG | - | chr4_3:534810-534829 | None:intergenic | 50.0% | |
| GCAAGAGCAGGCATCATTGA+AGG | - | chr4_3:534816-534835 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 534357 | 534983 | 534357 | ID=Msa0623330;Name=Msa0623330 |
| chr4_3 | mRNA | 534357 | 534983 | 534357 | ID=Msa0623330-mRNA-1;Parent=Msa0623330;Name=Msa0623330-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|-1|0|1|-1|1|1|0|208 |
| chr4_3 | exon | 534357 | 534983 | 534357 | ID=Msa0623330-mRNA-1:exon:185;Parent=Msa0623330-mRNA-1 |
| chr4_3 | CDS | 534357 | 534983 | 534357 | ID=Msa0623330-mRNA-1:cds;Parent=Msa0623330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
