Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49044.t1 | XP_024625378.1 | 96.6 | 378 | 12 | 1 | 5 | 382 | 6 | 382 | 2.30E-203 | 718 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49044.t1 | Q99JY4 | 27.0 | 244 | 150 | 6 | 92 | 321 | 74 | 303 | 2.4e-15 | 84.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49044.t1 | G7IAR4 | 96.0 | 378 | 12 | 2 | 5 | 382 | 6 | 380 | 6.0e-201 | 709.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene49044 | 0.904921 | 7.40E-80 | -1.69E-46 |
| MS.gene049171 | MS.gene49044 | 0.872917 | 2.20E-67 | -1.69E-46 |
| MS.gene049173 | MS.gene49044 | 0.818586 | 1.81E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene49044 | 0.854803 | 9.65E-62 | -1.69E-46 |
| MS.gene049222 | MS.gene49044 | 0.874527 | 6.30E-68 | -1.69E-46 |
| MS.gene049285 | MS.gene49044 | 0.851158 | 1.06E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene49044 | 0.841734 | 3.97E-58 | -1.69E-46 |
| MS.gene049427 | MS.gene49044 | 0.807279 | 5.46E-50 | -1.69E-46 |
| MS.gene049488 | MS.gene49044 | 0.807847 | 4.14E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene49044 | 0.899089 | 2.80E-77 | -1.69E-46 |
| MS.gene049633 | MS.gene49044 | 0.858425 | 8.31E-63 | -1.69E-46 |
| MS.gene049805 | MS.gene49044 | 0.868471 | 6.37E-66 | -1.69E-46 |
| MS.gene050163 | MS.gene49044 | 0.815168 | 1.06E-51 | -1.69E-46 |
| MS.gene050165 | MS.gene49044 | 0.804653 | 1.95E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene49044 | 0.839043 | 2.01E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene49044 | 0.83554 | 1.58E-56 | -1.69E-46 |
| MS.gene050444 | MS.gene49044 | 0.830691 | 2.55E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene49044 | 0.83897 | 2.10E-57 | -1.69E-46 |
| MS.gene050518 | MS.gene49044 | 0.808395 | 3.16E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene49044 | 0.882237 | 1.23E-70 | -1.69E-46 |
| MS.gene050577 | MS.gene49044 | 0.858578 | 7.48E-63 | -1.69E-46 |
| MS.gene050593 | MS.gene49044 | 0.835448 | 1.67E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene49044 | 0.824399 | 8.24E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene49044 | 0.832618 | 8.53E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene49044 | 0.814476 | 1.51E-51 | -1.69E-46 |
| MS.gene050690 | MS.gene49044 | 0.828397 | 9.20E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene49044 | 0.842945 | 1.90E-58 | -1.69E-46 |
| MS.gene050747 | MS.gene49044 | 0.880085 | 7.34E-70 | -1.69E-46 |
| MS.gene050772 | MS.gene49044 | 0.882903 | 7.05E-71 | -1.69E-46 |
| MS.gene05080 | MS.gene49044 | 0.865991 | 3.95E-65 | -1.69E-46 |
| MS.gene05081 | MS.gene49044 | 0.893899 | 4.09E-75 | -1.69E-46 |
| MS.gene050868 | MS.gene49044 | 0.834537 | 2.83E-56 | -1.69E-46 |
| MS.gene050871 | MS.gene49044 | 0.834704 | 2.57E-56 | -1.69E-46 |
| MS.gene050904 | MS.gene49044 | 0.809298 | 2.03E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene49044 | 0.868016 | 8.93E-66 | -1.69E-46 |
| MS.gene050986 | MS.gene49044 | 0.804504 | 2.09E-49 | -1.69E-46 |
| MS.gene05100 | MS.gene49044 | 0.809695 | 1.67E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene49044 | 0.861014 | 1.38E-63 | -1.69E-46 |
| MS.gene051167 | MS.gene49044 | -0.828939 | 6.80E-55 | -1.69E-46 |
| MS.gene051317 | MS.gene49044 | 0.83628 | 1.03E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene49044 | 0.824834 | 6.51E-54 | -1.69E-46 |
| MS.gene051438 | MS.gene49044 | 0.832225 | 1.07E-55 | -1.69E-46 |
| MS.gene051551 | MS.gene49044 | 0.806144 | 9.49E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene49044 | 0.885689 | 6.55E-72 | -1.69E-46 |
| MS.gene051692 | MS.gene49044 | 0.809716 | 1.65E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene49044 | 0.824574 | 7.50E-54 | -1.69E-46 |
| MS.gene051734 | MS.gene49044 | 0.827406 | 1.59E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene49044 | 0.818354 | 2.05E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene49044 | 0.925138 | 2.75E-90 | -1.69E-46 |
| MS.gene051858 | MS.gene49044 | 0.855019 | 8.36E-62 | -1.69E-46 |
| MS.gene051874 | MS.gene49044 | 0.808607 | 2.85E-50 | -1.69E-46 |
| MS.gene051941 | MS.gene49044 | 0.805297 | 1.43E-49 | -1.69E-46 |
| MS.gene052134 | MS.gene49044 | 0.811708 | 6.12E-51 | -1.69E-46 |
| MS.gene052136 | MS.gene49044 | 0.811619 | 6.39E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene49044 | 0.878135 | 3.59E-69 | -1.69E-46 |
| MS.gene052322 | MS.gene49044 | 0.820579 | 6.37E-53 | -1.69E-46 |
| MS.gene052346 | MS.gene49044 | 0.817624 | 2.99E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene49044 | 0.810207 | 1.29E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene49044 | 0.867673 | 1.15E-65 | -1.69E-46 |
| MS.gene052421 | MS.gene49044 | 0.833102 | 6.47E-56 | -1.69E-46 |
| MS.gene052481 | MS.gene49044 | 0.848064 | 7.77E-60 | -1.69E-46 |
| MS.gene052482 | MS.gene49044 | 0.823796 | 1.14E-53 | -1.69E-46 |
| MS.gene052484 | MS.gene49044 | 0.843776 | 1.14E-58 | -1.69E-46 |
| MS.gene052486 | MS.gene49044 | 0.831518 | 1.59E-55 | -1.69E-46 |
| MS.gene052501 | MS.gene49044 | 0.877566 | 5.67E-69 | -1.69E-46 |
| MS.gene052503 | MS.gene49044 | 0.885573 | 7.24E-72 | -1.69E-46 |
| MS.gene052505 | MS.gene49044 | 0.873559 | 1.34E-67 | -1.69E-46 |
| MS.gene052506 | MS.gene49044 | 0.846344 | 2.30E-59 | -1.69E-46 |
| MS.gene052615 | MS.gene49044 | 0.883392 | 4.66E-71 | -1.69E-46 |
| MS.gene052820 | MS.gene49044 | 0.814503 | 1.49E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene49044 | 0.843427 | 1.41E-58 | -1.69E-46 |
| MS.gene052823 | MS.gene49044 | 0.880332 | 5.99E-70 | -1.69E-46 |
| MS.gene052825 | MS.gene49044 | 0.883379 | 4.72E-71 | -1.69E-46 |
| MS.gene052870 | MS.gene49044 | 0.842979 | 1.86E-58 | -1.69E-46 |
| MS.gene052872 | MS.gene49044 | 0.858157 | 9.99E-63 | -1.69E-46 |
| MS.gene052966 | MS.gene49044 | 0.824044 | 9.99E-54 | -1.69E-46 |
| MS.gene052982 | MS.gene49044 | 0.854516 | 1.17E-61 | -1.69E-46 |
| MS.gene052986 | MS.gene49044 | 0.818055 | 2.39E-52 | -1.69E-46 |
| MS.gene052987 | MS.gene49044 | 0.818517 | 1.88E-52 | -1.69E-46 |
| MS.gene053103 | MS.gene49044 | 0.829131 | 6.11E-55 | -1.69E-46 |
| MS.gene053104 | MS.gene49044 | 0.837904 | 3.95E-57 | -1.69E-46 |
| MS.gene053117 | MS.gene49044 | 0.839536 | 1.49E-57 | -1.69E-46 |
| MS.gene053203 | MS.gene49044 | 0.853949 | 1.70E-61 | -1.69E-46 |
| MS.gene053207 | MS.gene49044 | 0.869807 | 2.35E-66 | -1.69E-46 |
| MS.gene053213 | MS.gene49044 | 0.855303 | 6.91E-62 | -1.69E-46 |
| MS.gene053286 | MS.gene49044 | 0.850168 | 2.02E-60 | -1.69E-46 |
| MS.gene053421 | MS.gene49044 | -0.825065 | 5.74E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene49044 | 0.831582 | 1.54E-55 | -1.69E-46 |
| MS.gene053449 | MS.gene49044 | 0.802199 | 6.28E-49 | -1.69E-46 |
| MS.gene053479 | MS.gene49044 | 0.824763 | 6.77E-54 | -1.69E-46 |
| MS.gene053480 | MS.gene49044 | 0.885652 | 6.76E-72 | -1.69E-46 |
| MS.gene053574 | MS.gene49044 | 0.864122 | 1.53E-64 | -1.69E-46 |
| MS.gene053579 | MS.gene49044 | 0.817048 | 4.04E-52 | -1.69E-46 |
| MS.gene053626 | MS.gene49044 | 0.834959 | 2.22E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene49044 | 0.89247 | 1.54E-74 | -1.69E-46 |
| MS.gene053824 | MS.gene49044 | 0.879483 | 1.20E-69 | -1.69E-46 |
| MS.gene053873 | MS.gene49044 | 0.800473 | 1.42E-48 | -1.69E-46 |
| MS.gene053912 | MS.gene49044 | 0.81659 | 5.11E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene49044 | 0.860201 | 2.44E-63 | -1.69E-46 |
| MS.gene054003 | MS.gene49044 | 0.821083 | 4.87E-53 | -1.69E-46 |
| MS.gene054344 | MS.gene49044 | 0.809192 | 2.14E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene49044 | 0.847763 | 9.41E-60 | -1.69E-46 |
| MS.gene054595 | MS.gene49044 | 0.832908 | 7.23E-56 | -1.69E-46 |
| MS.gene054600 | MS.gene49044 | 0.868026 | 8.86E-66 | -1.69E-46 |
| MS.gene054642 | MS.gene49044 | 0.850573 | 1.56E-60 | -1.69E-46 |
| MS.gene054706 | MS.gene49044 | -0.838343 | 3.04E-57 | -1.69E-46 |
| MS.gene05470 | MS.gene49044 | 0.856921 | 2.32E-62 | -1.69E-46 |
| MS.gene054884 | MS.gene49044 | -0.82775 | 1.32E-54 | -1.69E-46 |
| MS.gene054927 | MS.gene49044 | 0.872113 | 4.08E-67 | -1.69E-46 |
| MS.gene05494 | MS.gene49044 | 0.854404 | 1.26E-61 | -1.69E-46 |
| MS.gene054954 | MS.gene49044 | 0.824261 | 8.88E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene49044 | 0.856039 | 4.21E-62 | -1.69E-46 |
| MS.gene055206 | MS.gene49044 | 0.893982 | 3.78E-75 | -1.69E-46 |
| MS.gene055224 | MS.gene49044 | 0.836573 | 8.65E-57 | -1.69E-46 |
| MS.gene055289 | MS.gene49044 | 0.875847 | 2.23E-68 | -1.69E-46 |
| MS.gene055362 | MS.gene49044 | 0.847712 | 9.72E-60 | -1.69E-46 |
| MS.gene055370 | MS.gene49044 | 0.82649 | 2.64E-54 | -1.69E-46 |
| MS.gene055486 | MS.gene49044 | 0.836212 | 1.07E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene49044 | 0.872698 | 2.60E-67 | -1.69E-46 |
| MS.gene055539 | MS.gene49044 | 0.809162 | 2.17E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene49044 | 0.87938 | 1.31E-69 | -1.69E-46 |
| MS.gene055722 | MS.gene49044 | 0.840621 | 7.79E-58 | -1.69E-46 |
| MS.gene055741 | MS.gene49044 | 0.815974 | 7.02E-52 | -1.69E-46 |
| MS.gene055744 | MS.gene49044 | 0.813953 | 1.97E-51 | -1.69E-46 |
| MS.gene055748 | MS.gene49044 | 0.827678 | 1.37E-54 | -1.69E-46 |
| MS.gene055750 | MS.gene49044 | 0.812396 | 4.33E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene49044 | 0.812082 | 5.07E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene49044 | 0.852644 | 4.03E-61 | -1.69E-46 |
| MS.gene055911 | MS.gene49044 | 0.800215 | 1.60E-48 | -1.69E-46 |
| MS.gene05592 | MS.gene49044 | 0.802138 | 6.47E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene49044 | 0.863604 | 2.21E-64 | -1.69E-46 |
| MS.gene056040 | MS.gene49044 | 0.802814 | 4.69E-49 | -1.69E-46 |
| MS.gene056046 | MS.gene49044 | 0.806005 | 1.01E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene49044 | 0.812047 | 5.16E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene49044 | 0.842444 | 2.58E-58 | -1.69E-46 |
| MS.gene056374 | MS.gene49044 | 0.806478 | 8.07E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene49044 | 0.837206 | 5.96E-57 | -1.69E-46 |
| MS.gene056409 | MS.gene49044 | 0.811021 | 8.62E-51 | -1.69E-46 |
| MS.gene056448 | MS.gene49044 | 0.809191 | 2.14E-50 | -1.69E-46 |
| MS.gene056449 | MS.gene49044 | 0.818454 | 1.94E-52 | -1.69E-46 |
| MS.gene056487 | MS.gene49044 | 0.857756 | 1.31E-62 | -1.69E-46 |
| MS.gene056504 | MS.gene49044 | 0.850679 | 1.45E-60 | -1.69E-46 |
| MS.gene056510 | MS.gene49044 | 0.819053 | 1.42E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene49044 | 0.841006 | 6.17E-58 | -1.69E-46 |
| MS.gene056610 | MS.gene49044 | 0.826432 | 2.72E-54 | -1.69E-46 |
| MS.gene05664 | MS.gene49044 | 0.839799 | 1.28E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene49044 | 0.846964 | 1.56E-59 | -1.69E-46 |
| MS.gene05666 | MS.gene49044 | 0.832227 | 1.07E-55 | -1.69E-46 |
| MS.gene056692 | MS.gene49044 | 0.842135 | 3.11E-58 | -1.69E-46 |
| MS.gene056782 | MS.gene49044 | 0.805378 | 1.37E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene49044 | 0.815904 | 7.28E-52 | -1.69E-46 |
| MS.gene056946 | MS.gene49044 | 0.812796 | 3.54E-51 | -1.69E-46 |
| MS.gene057048 | MS.gene49044 | 0.880605 | 4.78E-70 | -1.69E-46 |
| MS.gene057076 | MS.gene49044 | 0.866327 | 3.09E-65 | -1.69E-46 |
| MS.gene057086 | MS.gene49044 | 0.80743 | 5.07E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene49044 | 0.828709 | 7.73E-55 | -1.69E-46 |
| MS.gene057146 | MS.gene49044 | 0.813309 | 2.73E-51 | -1.69E-46 |
| MS.gene057196 | MS.gene49044 | 0.827126 | 1.86E-54 | -1.69E-46 |
| MS.gene057289 | MS.gene49044 | 0.814933 | 1.20E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene49044 | 0.801059 | 1.08E-48 | -1.69E-46 |
| MS.gene057332 | MS.gene49044 | 0.827744 | 1.32E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene49044 | 0.855839 | 4.82E-62 | -1.69E-46 |
| MS.gene057658 | MS.gene49044 | 0.905952 | 2.49E-80 | -1.69E-46 |
| MS.gene057734 | MS.gene49044 | 0.835806 | 1.35E-56 | -1.69E-46 |
| MS.gene057749 | MS.gene49044 | 0.820622 | 6.22E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene49044 | 0.831346 | 1.76E-55 | -1.69E-46 |
| MS.gene057831 | MS.gene49044 | 0.844792 | 6.07E-59 | -1.69E-46 |
| MS.gene057856 | MS.gene49044 | 0.861322 | 1.11E-63 | -1.69E-46 |
| MS.gene057857 | MS.gene49044 | 0.828624 | 8.11E-55 | -1.69E-46 |
| MS.gene05787 | MS.gene49044 | 0.821727 | 3.46E-53 | -1.69E-46 |
| MS.gene057926 | MS.gene49044 | 0.81005 | 1.40E-50 | -1.69E-46 |
| MS.gene058006 | MS.gene49044 | 0.809632 | 1.72E-50 | -1.69E-46 |
| MS.gene058007 | MS.gene49044 | 0.805458 | 1.32E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene49044 | 0.822208 | 2.68E-53 | -1.69E-46 |
| MS.gene058130 | MS.gene49044 | 0.850982 | 1.19E-60 | -1.69E-46 |
| MS.gene058157 | MS.gene49044 | 0.828176 | 1.04E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene49044 | 0.85397 | 1.68E-61 | -1.69E-46 |
| MS.gene058376 | MS.gene49044 | 0.870907 | 1.02E-66 | -1.69E-46 |
| MS.gene05837 | MS.gene49044 | 0.848762 | 4.99E-60 | -1.69E-46 |
| MS.gene058419 | MS.gene49044 | 0.874914 | 4.65E-68 | -1.69E-46 |
| MS.gene058444 | MS.gene49044 | 0.833297 | 5.78E-56 | -1.69E-46 |
| MS.gene058544 | MS.gene49044 | 0.862681 | 4.26E-64 | -1.69E-46 |
| MS.gene058700 | MS.gene49044 | 0.800918 | 1.15E-48 | -1.69E-46 |
| MS.gene058723 | MS.gene49044 | 0.846744 | 1.79E-59 | -1.69E-46 |
| MS.gene058773 | MS.gene49044 | 0.836798 | 7.58E-57 | -1.69E-46 |
| MS.gene058838 | MS.gene49044 | 0.910443 | 1.86E-82 | -1.69E-46 |
| MS.gene05883 | MS.gene49044 | 0.81331 | 2.73E-51 | -1.69E-46 |
| MS.gene058948 | MS.gene49044 | 0.826762 | 2.27E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene49044 | 0.828336 | 9.51E-55 | -1.69E-46 |
| MS.gene059023 | MS.gene49044 | 0.891282 | 4.58E-74 | -1.69E-46 |
| MS.gene05913 | MS.gene49044 | 0.828144 | 1.06E-54 | -1.69E-46 |
| MS.gene05914 | MS.gene49044 | 0.850603 | 1.53E-60 | -1.69E-46 |
| MS.gene05934 | MS.gene49044 | 0.882191 | 1.28E-70 | -1.69E-46 |
| MS.gene059367 | MS.gene49044 | 0.811195 | 7.91E-51 | -1.69E-46 |
| MS.gene059455 | MS.gene49044 | 0.843132 | 1.69E-58 | -1.69E-46 |
| MS.gene059512 | MS.gene49044 | 0.800533 | 1.38E-48 | -1.69E-46 |
| MS.gene059526 | MS.gene49044 | -0.800065 | 1.72E-48 | -1.69E-46 |
| MS.gene059536 | MS.gene49044 | 0.811375 | 7.22E-51 | -1.69E-46 |
| MS.gene059667 | MS.gene49044 | 0.861265 | 1.16E-63 | -1.69E-46 |
| MS.gene059677 | MS.gene49044 | 0.855742 | 5.14E-62 | -1.69E-46 |
| MS.gene059688 | MS.gene49044 | 0.803819 | 2.91E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene49044 | 0.881618 | 2.07E-70 | -1.69E-46 |
| MS.gene059756 | MS.gene49044 | 0.827773 | 1.30E-54 | -1.69E-46 |
| MS.gene059801 | MS.gene49044 | 0.835371 | 1.75E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene49044 | 0.822342 | 2.49E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene49044 | 0.847646 | 1.01E-59 | -1.69E-46 |
| MS.gene06000 | MS.gene49044 | 0.804776 | 1.84E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene49044 | 0.829802 | 4.20E-55 | -1.69E-46 |
| MS.gene060482 | MS.gene49044 | 0.821177 | 4.64E-53 | -1.69E-46 |
| MS.gene060485 | MS.gene49044 | 0.829435 | 5.16E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene49044 | 0.871902 | 4.80E-67 | -1.69E-46 |
| MS.gene060778 | MS.gene49044 | 0.816847 | 4.48E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene49044 | 0.839603 | 1.44E-57 | -1.69E-46 |
| MS.gene060804 | MS.gene49044 | 0.83542 | 1.70E-56 | -1.69E-46 |
| MS.gene060818 | MS.gene49044 | 0.804163 | 2.46E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene49044 | 0.866591 | 2.55E-65 | -1.69E-46 |
| MS.gene060837 | MS.gene49044 | 0.834375 | 3.11E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene49044 | 0.884178 | 2.39E-71 | -1.69E-46 |
| MS.gene060982 | MS.gene49044 | 0.841185 | 5.54E-58 | -1.69E-46 |
| MS.gene061041 | MS.gene49044 | 0.829663 | 4.54E-55 | -1.69E-46 |
| MS.gene061150 | MS.gene49044 | 0.852436 | 4.62E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49044.t1 | MTR_1g101540 | 96.032 | 378 | 12 | 2 | 5 | 382 | 6 | 380 | 0.0 | 731 |
| MS.gene49044.t1 | MTR_4g088945 | 88.764 | 89 | 6 | 2 | 222 | 308 | 236 | 322 | 6.57e-43 | 153 |
| MS.gene49044.t1 | MTR_4g046707 | 29.870 | 231 | 140 | 6 | 92 | 321 | 98 | 307 | 1.18e-24 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49044.t1 | AT5G52030 | 65.104 | 384 | 112 | 7 | 9 | 373 | 12 | 392 | 6.54e-167 | 473 |
| MS.gene49044.t1 | AT5G52030 | 70.000 | 240 | 67 | 2 | 139 | 373 | 9 | 248 | 9.60e-110 | 322 |
| MS.gene49044.t1 | AT1G05270 | 31.169 | 231 | 137 | 6 | 92 | 321 | 111 | 320 | 5.26e-26 | 107 |
| MS.gene49044.t1 | AT2G32340 | 30.638 | 235 | 134 | 7 | 92 | 321 | 97 | 307 | 1.02e-22 | 98.6 |
Find 82 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATCTCTCAGACCCTTAA+AGG | 0.146320 | 1.3:-69936219 | MS.gene49044:CDS |
| AAATGGATTGGTTGTGAAAA+TGG | 0.206345 | 1.3:+69936253 | None:intergenic |
| AGGTTTGACTGAAACCTTTA+AGG | 0.214521 | 1.3:+69936205 | None:intergenic |
| CGGTGATTGGCATTGTCTTA+TGG | 0.221376 | 1.3:-69933608 | MS.gene49044:CDS |
| AGGCTGTGAATAACTGTAAA+AGG | 0.224403 | 1.3:-69933791 | MS.gene49044:CDS |
| ACCATTTATGAATTCATATA+AGG | 0.233556 | 1.3:+69933584 | None:intergenic |
| TCAAATATTGACCGCCCTTT+TGG | 0.242909 | 1.3:-69935177 | MS.gene49044:CDS |
| GGTTTGGTCCTGTTCCTTCT+TGG | 0.243513 | 1.3:-69936058 | MS.gene49044:CDS |
| AGTTGGCGCACAACTAGTTT+TGG | 0.268585 | 1.3:-69935033 | MS.gene49044:CDS |
| GGTGATTGGCATTGTCTTAT+GGG | 0.292214 | 1.3:-69933607 | MS.gene49044:CDS |
| TTGTTGAACCTGAGTATATT+TGG | 0.298094 | 1.3:-69936025 | MS.gene49044:CDS |
| GCCTTATATGAATTCATAAA+TGG | 0.312892 | 1.3:-69933585 | MS.gene49044:CDS |
| CCTGAGTATATTTGGTTGAT+TGG | 0.323014 | 1.3:-69936017 | MS.gene49044:CDS |
| TTACCCTGAGTTGCTTGATT+TGG | 0.331889 | 1.3:-69936117 | MS.gene49044:CDS |
| CATGTATAAGAGGCGGCAAT+AGG | 0.338425 | 1.3:+69933968 | None:intergenic |
| TGACAATGGTAGCTTGGTTT+TGG | 0.339365 | 1.3:-69936093 | MS.gene49044:CDS |
| AGCTCAACAACCACATTATC+TGG | 0.358672 | 1.3:+69935933 | None:intergenic |
| GTACATACTGTTATTTCAAT+TGG | 0.373632 | 1.3:+69935002 | None:intergenic |
| TCAAATGATGGGGCTTCTAA+TGG | 0.385391 | 1.3:-69933669 | MS.gene49044:CDS |
| ATCAGCTTGACAAACAATTA+AGG | 0.385684 | 1.3:-69935520 | MS.gene49044:CDS |
| GAGCATGGAAGGCTTTGAAT+TGG | 0.390401 | 1.3:-69934796 | MS.gene49044:CDS |
| TTGAGATTTCGAGACCTTGC+TGG | 0.392448 | 1.3:-69933699 | MS.gene49044:CDS |
| GGTTTGACTGAAACCTTTAA+GGG | 0.395303 | 1.3:+69936206 | None:intergenic |
| GCAGATTTCATTTCCAGAGC+TGG | 0.416909 | 1.3:-69935563 | MS.gene49044:intron |
| TATGCACTGTTAGCTGATAC+AGG | 0.417737 | 1.3:-69933726 | MS.gene49044:CDS |
| AATGGATTGGTTGTGAAAAT+GGG | 0.423259 | 1.3:+69936254 | None:intergenic |
| TTGGTCCTGTTCCTTCTTGG+AGG | 0.424339 | 1.3:-69936055 | MS.gene49044:CDS |
| TTTGGCATTGAGATTACTCC+TGG | 0.424534 | 1.3:-69935223 | MS.gene49044:CDS |
| AAAAGGGTGGTAGGTGTGAT+TGG | 0.444853 | 1.3:-69933774 | MS.gene49044:CDS |
| CAGATTTCATTTCCAGAGCT+GGG | 0.445745 | 1.3:-69935562 | MS.gene49044:CDS |
| TTAGTGAGGGACACGGTGAT+TGG | 0.458487 | 1.3:-69933621 | MS.gene49044:CDS |
| ATCAGGTGGTCAAACTGCTT+TGG | 0.458604 | 1.3:-69935241 | MS.gene49044:intron |
| TTGGTTCAGAAGAAGAGGTT+TGG | 0.465843 | 1.3:-69936074 | MS.gene49044:CDS |
| TGAATTACCTCATCTCCAAA+AGG | 0.477616 | 1.3:+69935162 | None:intergenic |
| AGCATACATGATCCCAGCTC+TGG | 0.484447 | 1.3:+69935550 | None:intergenic |
| TAGTTGAAGTCAGGTGGTGG+AGG | 0.491014 | 1.3:+69936185 | None:intergenic |
| TCATTCCTCCAAGAAGGAAC+AGG | 0.492896 | 1.3:+69936050 | None:intergenic |
| TCTAGCTTGTAGTTGAAGTC+AGG | 0.495859 | 1.3:+69936176 | None:intergenic |
| GTGGTAGGTGTGATTGGAAA+AGG | 0.496641 | 1.3:-69933768 | MS.gene49044:CDS |
| CGAAAAGTGTCAGAGGAAGT+TGG | 0.501232 | 1.3:-69935050 | MS.gene49044:CDS |
| TTGTTCTGCAGTATCTTGCA+TGG | 0.505968 | 1.3:-69933830 | MS.gene49044:intron |
| ATGATGGGGCTTCTAATGGC+TGG | 0.510475 | 1.3:-69933665 | MS.gene49044:CDS |
| ACAAATTCATTCCTCCAAGA+AGG | 0.510523 | 1.3:+69936044 | None:intergenic |
| GTATCTCGTTCATGTATAAG+AGG | 0.521701 | 1.3:+69933958 | None:intergenic |
| TTTGGCTGACAATGGTAGCT+TGG | 0.521900 | 1.3:-69936099 | MS.gene49044:CDS |
| ATGTATAAGAGGCGGCAATA+GGG | 0.521908 | 1.3:+69933969 | None:intergenic |
| TCAGCCAAATCAAGCAACTC+AGG | 0.528460 | 1.3:+69936113 | None:intergenic |
| TGAGATTTCGAGACCTTGCT+GGG | 0.531713 | 1.3:-69933698 | MS.gene49044:CDS |
| GAATTACCTCATCTCCAAAA+GGG | 0.540567 | 1.3:+69935163 | None:intergenic |
| GTAGCTTCAGAGAGCATGGA+AGG | 0.554057 | 1.3:-69934807 | MS.gene49044:intron |
| GGCTGTGAATAACTGTAAAA+GGG | 0.564509 | 1.3:-69933790 | MS.gene49044:CDS |
| ATTGGAAAAGGCCACATGAA+TGG | 0.567386 | 1.3:-69933756 | MS.gene49044:CDS |
| CAGAAAGCAAGTTCAGATGA+TGG | 0.573617 | 1.3:-69934033 | MS.gene49044:CDS |
| CATTTCTACAAATAAGCTTG+AGG | 0.575953 | 1.3:-69934717 | MS.gene49044:intron |
| TTCTAAAGAGTCAGCTATGG+AGG | 0.576746 | 1.3:-69935982 | MS.gene49044:CDS |
| ATGGTCTCTGAAGCGGAGCA+AGG | 0.578967 | 1.3:-69933811 | MS.gene49044:CDS |
| AGCTTGTAGTTGAAGTCAGG+TGG | 0.580467 | 1.3:+69936179 | None:intergenic |
| TGTTTCTAAAGAGTCAGCTA+TGG | 0.581325 | 1.3:-69935985 | MS.gene49044:CDS |
| TTATATGAATTCATAAATGG+TGG | 0.584002 | 1.3:-69933582 | MS.gene49044:CDS |
| ATCTTGCATGGTCTCTGAAG+CGG | 0.593986 | 1.3:-69933818 | MS.gene49044:CDS |
| CCCTCACTAAACTCTTGACT+AGG | 0.596428 | 1.3:+69933634 | None:intergenic |
| CCAATCAACCAAATATACTC+AGG | 0.602610 | 1.3:+69936017 | None:intergenic |
| ATAAGAGGCGGCAATAGGGA+TGG | 0.604140 | 1.3:+69933973 | None:intergenic |
| CGCTGCTCGAAAAGTGTCAG+AGG | 0.606032 | 1.3:-69935057 | MS.gene49044:CDS |
| TTGTAGTTGAAGTCAGGTGG+TGG | 0.615582 | 1.3:+69936182 | None:intergenic |
| AATAACTGTAAAAGGGTGGT+AGG | 0.617141 | 1.3:-69933783 | MS.gene49044:CDS |
| ATTGGTTGTGAAAATGGGGA+AGG | 0.628812 | 1.3:+69936259 | None:intergenic |
| AGCTGTGAAGCCAGATAATG+TGG | 0.641571 | 1.3:-69935943 | MS.gene49044:CDS |
| TTGCTTGATTTGGCTGACAA+TGG | 0.644980 | 1.3:-69936107 | MS.gene49044:CDS |
| CTGATGAAGATGTTATTCCA+CGG | 0.647888 | 1.3:+69934741 | None:intergenic |
| TTATTGACGATAGTTATCCG+TGG | 0.648146 | 1.3:-69934758 | MS.gene49044:CDS |
| ATGGATTGGTTGTGAAAATG+GGG | 0.648347 | 1.3:+69936255 | None:intergenic |
| ACCTAGTCAAGAGTTTAGTG+AGG | 0.655508 | 1.3:-69933635 | MS.gene49044:CDS |
| CAAGAGTTTAGTGAGGGACA+CGG | 0.657364 | 1.3:-69933628 | MS.gene49044:CDS |
| CCTAGTCAAGAGTTTAGTGA+GGG | 0.661710 | 1.3:-69933634 | MS.gene49044:CDS |
| ATGCACTGTTAGCTGATACA+GGG | 0.664898 | 1.3:-69933725 | MS.gene49044:CDS |
| CAGCCAAATCAAGCAACTCA+GGG | 0.672096 | 1.3:+69936114 | None:intergenic |
| CATATATTACACCATTCATG+TGG | 0.675235 | 1.3:+69933745 | None:intergenic |
| TGTGAATAACTGTAAAAGGG+TGG | 0.676596 | 1.3:-69933787 | MS.gene49044:CDS |
| TCTCGTTCATGTATAAGAGG+CGG | 0.680308 | 1.3:+69933961 | None:intergenic |
| TTACCTCATCTCCAAAAGGG+CGG | 0.697162 | 1.3:+69935166 | None:intergenic |
| ATTGGTCGTAGCATAAACCT+CGG | 0.708741 | 1.3:-69935455 | MS.gene49044:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATACTATTGTTTACT+TGG | + | chr1.3:69935995-69936014 | None:intergenic | 15.0% |
| !! | AAAAATACTATTGTTTACTT+GGG | + | chr1.3:69935994-69936013 | None:intergenic | 15.0% |
| !! | ATTTAATCTAAATCAAGATA+AGG | - | chr1.3:69934490-69934509 | MS.gene49044:intron | 15.0% |
| !! | TATTGTATTATTGCATATTT+CGG | - | chr1.3:69934166-69934185 | MS.gene49044:intron | 15.0% |
| !! | TTATCTTGATTTAGATTAAA+TGG | + | chr1.3:69934491-69934510 | None:intergenic | 15.0% |
| !! | TTTAATCTAAATCAAGATAA+GGG | - | chr1.3:69934491-69934510 | MS.gene49044:intron | 15.0% |
| !!! | ACAAAATATCATTTTAAAAG+GGG | + | chr1.3:69935233-69935252 | None:intergenic | 15.0% |
| !!! | GACAAAATATCATTTTAAAA+GGG | + | chr1.3:69935234-69935253 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTGAACAAAG+TGG | - | chr1.3:69935347-69935366 | MS.gene49044:intron | 15.0% |
| !! | ACCATTTATGAATTCATATA+AGG | + | chr1.3:69936266-69936285 | None:intergenic | 20.0% |
| !! | ATAAAATTAGGAGCTATATA+TGG | + | chr1.3:69934125-69934144 | None:intergenic | 20.0% |
| !! | ATTTGTCAATATGCATTATA+CGG | - | chr1.3:69934197-69934216 | MS.gene49044:intron | 20.0% |
| !! | TTATATGAATTCATAAATGG+TGG | - | chr1.3:69936265-69936284 | MS.gene49044:CDS | 20.0% |
| !!! | GGACAAAATATCATTTTAAA+AGG | + | chr1.3:69935235-69935254 | None:intergenic | 20.0% |
| ! | AAAACTTATTTCAATACCCT+TGG | + | chr1.3:69935578-69935597 | None:intergenic | 25.0% |
| ! | AACATTTCACTATAACTGAA+TGG | + | chr1.3:69935614-69935633 | None:intergenic | 25.0% |
| ! | AAGAAAATCTCAACATTAAC+TGG | + | chr1.3:69934005-69934024 | None:intergenic | 25.0% |
| ! | ATATATAAAACTCTCAACCA+GGG | - | chr1.3:69935692-69935711 | MS.gene49044:intron | 25.0% |
| ! | GCCTTATATGAATTCATAAA+TGG | - | chr1.3:69936262-69936281 | MS.gene49044:CDS | 25.0% |
| ! | TATATATAAAACTCTCAACC+AGG | - | chr1.3:69935691-69935710 | MS.gene49044:intron | 25.0% |
| ! | TATTCCATAGTGTTCTTTAA+AGG | - | chr1.3:69934869-69934888 | MS.gene49044:intron | 25.0% |
| ! | TGTGTAAGATGCATAATTAA+AGG | - | chr1.3:69935644-69935663 | MS.gene49044:intron | 25.0% |
| ! | TTCAGTCGGAAAATAAAATT+AGG | + | chr1.3:69934137-69934156 | None:intergenic | 25.0% |
| ! | TTCCGAGTACTTTATTAATT+GGG | - | chr1.3:69935532-69935551 | MS.gene49044:CDS | 25.0% |
| ! | TTTAACCTAAACACAAAACA+CGG | + | chr1.3:69935311-69935330 | None:intergenic | 25.0% |
| ! | TTTCCGAGTACTTTATTAAT+TGG | - | chr1.3:69935531-69935550 | MS.gene49044:CDS | 25.0% |
| !! | AATTAATAAAGTACTCGGAA+AGG | + | chr1.3:69935532-69935551 | None:intergenic | 25.0% |
| !! | ATGTTGAGATTTTCTTATTC+AGG | - | chr1.3:69934009-69934028 | MS.gene49044:CDS | 25.0% |
| !! | ATTAATAAAGTACTCGGAAA+GGG | + | chr1.3:69935531-69935550 | None:intergenic | 25.0% |
| !! | ATTTCCTTTAAAGAACACTA+TGG | + | chr1.3:69934876-69934895 | None:intergenic | 25.0% |
| !! | TGTTTTATGATCGAAATATC+AGG | - | chr1.3:69934589-69934608 | MS.gene49044:intron | 25.0% |
| !!! | ACATATCTATCTTTTTTCTC+AGG | - | chr1.3:69934433-69934452 | MS.gene49044:intron | 25.0% |
| !!! | ATATCTATCTTTTTTCTCAG+GGG | - | chr1.3:69934435-69934454 | MS.gene49044:intron | 25.0% |
| !!! | CATATCTATCTTTTTTCTCA+GGG | - | chr1.3:69934434-69934453 | MS.gene49044:intron | 25.0% |
| !!! | GTACATACTGTTATTTCAAT+TGG | + | chr1.3:69934848-69934867 | None:intergenic | 25.0% |
| !!! | TAATGTGTCTTTAAGATACT+AGG | + | chr1.3:69934464-69934483 | None:intergenic | 25.0% |
| !!! | TTTATTTTGTACCCATGAAT+TGG | - | chr1.3:69934523-69934542 | MS.gene49044:intron | 25.0% |
| ACATCTCAAAACCAATTCAT+GGG | + | chr1.3:69934537-69934556 | None:intergenic | 30.0% | |
| ATCAGCTTGACAAACAATTA+AGG | - | chr1.3:69934327-69934346 | MS.gene49044:intron | 30.0% | |
| CATATATTACACCATTCATG+TGG | + | chr1.3:69936105-69936124 | None:intergenic | 30.0% | |
| CATTTCTACAAATAAGCTTG+AGG | - | chr1.3:69935130-69935149 | MS.gene49044:intron | 30.0% | |
| CTGGGAAAAATTCAAATGAT+GGG | - | chr1.3:69936167-69936186 | MS.gene49044:CDS | 30.0% | |
| GTAATTGAGATTGACATTCT+AGG | + | chr1.3:69935168-69935187 | None:intergenic | 30.0% | |
| TCTGTATGATCTTAGGATAA+TGG | - | chr1.3:69934998-69935017 | MS.gene49044:intron | 30.0% | |
| TGGGAAAAATTCAAATGATG+GGG | - | chr1.3:69936168-69936187 | MS.gene49044:CDS | 30.0% | |
| TTGTTGAACCTGAGTATATT+TGG | - | chr1.3:69933822-69933841 | MS.gene49044:CDS | 30.0% | |
| TTTATGATCGAAATATCAGG+TGG | - | chr1.3:69934592-69934611 | MS.gene49044:intron | 30.0% | |
| ! | AATGATATTTTGTCCTGTTC+CGG | - | chr1.3:69935240-69935259 | MS.gene49044:intron | 30.0% |
| ! | ATGTACGGAATTTGAAACAA+TGG | - | chr1.3:69934926-69934945 | MS.gene49044:intron | 30.0% |
| ! | ATTTTCCGACTGAAATCATA+GGG | - | chr1.3:69934143-69934162 | MS.gene49044:intron | 30.0% |
| ! | CTGCTTCAGATTTTTATGTA+CGG | - | chr1.3:69934911-69934930 | MS.gene49044:intron | 30.0% |
| ! | GAAGTATTCTGTATGATCTT+AGG | - | chr1.3:69934991-69935010 | MS.gene49044:intron | 30.0% |
| ! | TATTTTCCGACTGAAATCAT+AGG | - | chr1.3:69934142-69934161 | MS.gene49044:intron | 30.0% |
| ! | TGTACGGAATTTGAAACAAT+GGG | - | chr1.3:69934927-69934946 | MS.gene49044:intron | 30.0% |
| ! | TTCTCTGTATTTGTAGCTTT+TGG | - | chr1.3:69934713-69934732 | MS.gene49044:intron | 30.0% |
| ! | TTGTGTTTAGGTTAAATGAG+TGG | - | chr1.3:69935315-69935334 | MS.gene49044:intron | 30.0% |
| !! | AAATGGATTGGTTGTGAAAA+TGG | + | chr1.3:69933597-69933616 | None:intergenic | 30.0% |
| !! | AATGGATTGGTTGTGAAAAT+GGG | + | chr1.3:69933596-69933615 | None:intergenic | 30.0% |
| !! | GATGTTTTTGAGAGGAAAAA+TGG | + | chr1.3:69933614-69933633 | None:intergenic | 30.0% |
| !! | TTTTGAGAGGAAAAATGGAT+TGG | + | chr1.3:69933609-69933628 | None:intergenic | 30.0% |
| !!! | TTTTTTGAACAAAGTGGCTT+AGG | - | chr1.3:69935353-69935372 | MS.gene49044:intron | 30.0% |
| AAAACTGAAGAGCCAAATCT+TGG | - | chr1.3:69935782-69935801 | MS.gene49044:intron | 35.0% | |
| AATAACTGTAAAAGGGTGGT+AGG | - | chr1.3:69936064-69936083 | MS.gene49044:CDS | 35.0% | |
| ACAAATTCATTCCTCCAAGA+AGG | + | chr1.3:69933806-69933825 | None:intergenic | 35.0% | |
| ACTGAGTCTTCAACAATTGA+AGG | + | chr1.3:69934225-69934244 | None:intergenic | 35.0% | |
| AGCGGAAATCTTAGCTAAAT+GGG | + | chr1.3:69935420-69935439 | None:intergenic | 35.0% | |
| AGGAGCTATATATGGACAAA+GGG | + | chr1.3:69934117-69934136 | None:intergenic | 35.0% | |
| AGGCTGTGAATAACTGTAAA+AGG | - | chr1.3:69936056-69936075 | MS.gene49044:CDS | 35.0% | |
| AGGTTTGACTGAAACCTTTA+AGG | + | chr1.3:69933645-69933664 | None:intergenic | 35.0% | |
| ATCTTAGCTAAATGGGGAAA+AGG | + | chr1.3:69935413-69935432 | None:intergenic | 35.0% | |
| CAATACCCTATGATTTCAGT+CGG | + | chr1.3:69934151-69934170 | None:intergenic | 35.0% | |
| CCAATCAACCAAATATACTC+AGG | + | chr1.3:69933833-69933852 | None:intergenic | 35.0% | |
| CCTGAGTATATTTGGTTGAT+TGG | - | chr1.3:69933830-69933849 | MS.gene49044:intron | 35.0% | |
| CTGATGAAGATGTTATTCCA+CGG | + | chr1.3:69935109-69935128 | None:intergenic | 35.0% | |
| CTGCAACTAATACCAAGATT+TGG | + | chr1.3:69935797-69935816 | None:intergenic | 35.0% | |
| GAATTACCTCATCTCCAAAA+GGG | + | chr1.3:69934687-69934706 | None:intergenic | 35.0% | |
| GACATCTCAAAACCAATTCA+TGG | + | chr1.3:69934538-69934557 | None:intergenic | 35.0% | |
| GCTGGGAAAAATTCAAATGA+TGG | - | chr1.3:69936166-69936185 | MS.gene49044:CDS | 35.0% | |
| GGCTGTGAATAACTGTAAAA+GGG | - | chr1.3:69936057-69936076 | MS.gene49044:CDS | 35.0% | |
| GGGAAAAGGAATAGCATAAA+AGG | + | chr1.3:69935399-69935418 | None:intergenic | 35.0% | |
| GGTTTGACTGAAACCTTTAA+GGG | + | chr1.3:69933644-69933663 | None:intergenic | 35.0% | |
| GTATCTCGTTCATGTATAAG+AGG | + | chr1.3:69935892-69935911 | None:intergenic | 35.0% | |
| TAGATATTTATGCATCTCCC+TGG | + | chr1.3:69935712-69935731 | None:intergenic | 35.0% | |
| TAGGAGCTATATATGGACAA+AGG | + | chr1.3:69934118-69934137 | None:intergenic | 35.0% | |
| TGAATTACCTCATCTCCAAA+AGG | + | chr1.3:69934688-69934707 | None:intergenic | 35.0% | |
| TGTGAATAACTGTAAAAGGG+TGG | - | chr1.3:69936060-69936079 | MS.gene49044:CDS | 35.0% | |
| TTAGGTTAAATGAGTGGCTT+AGG | - | chr1.3:69935321-69935340 | MS.gene49044:intron | 35.0% | |
| TTATTGACGATAGTTATCCG+TGG | - | chr1.3:69935089-69935108 | MS.gene49044:intron | 35.0% | |
| TTTCACTATAACTGAATGGC+TGG | + | chr1.3:69935610-69935629 | None:intergenic | 35.0% | |
| ! | ATGATATTTTGTCCTGTTCC+GGG | - | chr1.3:69935241-69935260 | MS.gene49044:intron | 35.0% |
| ! | CATTTGAATTTTTCCCAGCA+AGG | + | chr1.3:69936165-69936184 | None:intergenic | 35.0% |
| ! | GATTTTCTTATTCAGGCTAG+TGG | - | chr1.3:69934016-69934035 | MS.gene49044:CDS | 35.0% |
| ! | GGCCCAATTAATAAAGTACT+CGG | + | chr1.3:69935537-69935556 | None:intergenic | 35.0% |
| ! | TCTACTATGTTTTCCTTGAG+CGG | - | chr1.3:69934350-69934369 | MS.gene49044:intron | 35.0% |
| ! | TGTTTCTAAAGAGTCAGCTA+TGG | - | chr1.3:69933862-69933881 | MS.gene49044:intron | 35.0% |
| !! | AATGGGGAAGGTTGATTTTA+TGG | + | chr1.3:69933579-69933598 | None:intergenic | 35.0% |
| !! | ATGGATTGGTTGTGAAAATG+GGG | + | chr1.3:69933595-69933614 | None:intergenic | 35.0% |
| !!! | ACTGGTTTTTTTGGAGCTAT+TGG | - | chr1.3:69934374-69934393 | MS.gene49044:intron | 35.0% |
| AACATCTCTCAGACCCTTAA+AGG | - | chr1.3:69933628-69933647 | MS.gene49044:CDS | 40.0% | |
| AACGAAAACCGTAGCTTAGT+AGG | + | chr1.3:69935453-69935472 | None:intergenic | 40.0% | |
| ACCTAGTCAAGAGTTTAGTG+AGG | - | chr1.3:69936212-69936231 | MS.gene49044:CDS | 40.0% | |
| ACGAAAACCGTAGCTTAGTA+GGG | + | chr1.3:69935452-69935471 | None:intergenic | 40.0% | |
| AGCTCAACAACCACATTATC+TGG | + | chr1.3:69933917-69933936 | None:intergenic | 40.0% | |
| ATGCACTGTTAGCTGATACA+GGG | - | chr1.3:69936122-69936141 | MS.gene49044:CDS | 40.0% | |
| ATGTATAAGAGGCGGCAATA+GGG | + | chr1.3:69935881-69935900 | None:intergenic | 40.0% | |
| ATTAAACAGTTCGCAGACCA+AGG | - | chr1.3:69935558-69935577 | MS.gene49044:CDS | 40.0% | |
| ATTGGAAAAGGCCACATGAA+TGG | - | chr1.3:69936091-69936110 | MS.gene49044:CDS | 40.0% | |
| ATTGGTCGTAGCATAAACCT+CGG | - | chr1.3:69934392-69934411 | MS.gene49044:intron | 40.0% | |
| ATTGGTTGTGAAAATGGGGA+AGG | + | chr1.3:69933591-69933610 | None:intergenic | 40.0% | |
| CAGAAAGCAAGTTCAGATGA+TGG | - | chr1.3:69935814-69935833 | MS.gene49044:intron | 40.0% | |
| CAGATTTCATTTCCAGAGCT+GGG | - | chr1.3:69934285-69934304 | MS.gene49044:intron | 40.0% | |
| CCTAGTCAAGAGTTTAGTGA+GGG | - | chr1.3:69936213-69936232 | MS.gene49044:CDS | 40.0% | |
| GAACAAAAATGTGCTTACCG+AGG | + | chr1.3:69934412-69934431 | None:intergenic | 40.0% | |
| GAGCGGAAATCTTAGCTAAA+TGG | + | chr1.3:69935421-69935440 | None:intergenic | 40.0% | |
| GCGGAAATCTTAGCTAAATG+GGG | + | chr1.3:69935419-69935438 | None:intergenic | 40.0% | |
| GGGATCAAGCATATAAAAGC+AGG | + | chr1.3:69935213-69935232 | None:intergenic | 40.0% | |
| GGTGATTGGCATTGTCTTAT+GGG | - | chr1.3:69936240-69936259 | MS.gene49044:CDS | 40.0% | |
| TATGCACTGTTAGCTGATAC+AGG | - | chr1.3:69936121-69936140 | MS.gene49044:CDS | 40.0% | |
| TCTCGTTCATGTATAAGAGG+CGG | + | chr1.3:69935889-69935908 | None:intergenic | 40.0% | |
| TCTTTGATGAAAAAGCAGCC+AGG | + | chr1.3:69934645-69934664 | None:intergenic | 40.0% | |
| TGGTCTGCGAACTGTTTAAT+CGG | + | chr1.3:69935558-69935577 | None:intergenic | 40.0% | |
| TTAAACAGTTCGCAGACCAA+GGG | - | chr1.3:69935559-69935578 | MS.gene49044:CDS | 40.0% | |
| TTACCCTGAGTTGCTTGATT+TGG | - | chr1.3:69933730-69933749 | MS.gene49044:CDS | 40.0% | |
| TTGGTTCAGAAGAAGAGGTT+TGG | - | chr1.3:69933773-69933792 | MS.gene49044:CDS | 40.0% | |
| TTGTTCTGCAGTATCTTGCA+TGG | - | chr1.3:69936017-69936036 | MS.gene49044:CDS | 40.0% | |
| TTGTTGAGCTATGTAGAAGC+AGG | - | chr1.3:69933927-69933946 | MS.gene49044:intron | 40.0% | |
| ! | AAGGTCCGTGTTTTGTGTTT+AGG | - | chr1.3:69935303-69935322 | MS.gene49044:intron | 40.0% |
| ! | ACTAAGCTACGGTTTTCGTT+GGG | - | chr1.3:69935453-69935472 | MS.gene49044:intron | 40.0% |
| ! | CTACTATGTTTTCCTTGAGC+GGG | - | chr1.3:69934351-69934370 | MS.gene49044:intron | 40.0% |
| ! | TACTAAGCTACGGTTTTCGT+TGG | - | chr1.3:69935452-69935471 | MS.gene49044:intron | 40.0% |
| ! | TCAAATATTGACCGCCCTTT+TGG | - | chr1.3:69934670-69934689 | MS.gene49044:intron | 40.0% |
| ! | TCAAATGATGGGGCTTCTAA+TGG | - | chr1.3:69936178-69936197 | MS.gene49044:CDS | 40.0% |
| ! | TCTAGCTTGTAGTTGAAGTC+AGG | + | chr1.3:69933674-69933693 | None:intergenic | 40.0% |
| ! | TGACAATGGTAGCTTGGTTT+TGG | - | chr1.3:69933754-69933773 | MS.gene49044:CDS | 40.0% |
| ! | TTCTAAAGAGTCAGCTATGG+AGG | - | chr1.3:69933865-69933884 | MS.gene49044:intron | 40.0% |
| ! | TTTGGCATTGAGATTACTCC+TGG | - | chr1.3:69934624-69934643 | MS.gene49044:intron | 40.0% |
| ! | TTTTGTAGCTTCAGAGAGCA+TGG | - | chr1.3:69935036-69935055 | MS.gene49044:CDS | 40.0% |
| !! | GTCTGAGAGATGTTTTTGAG+AGG | + | chr1.3:69933622-69933641 | None:intergenic | 40.0% |
| !! | TTGCTTGATTTGGCTGACAA+TGG | - | chr1.3:69933740-69933759 | MS.gene49044:CDS | 40.0% |
| !!! | CACAACTAGTTTTGGGAGAT+AGG | - | chr1.3:69934822-69934841 | MS.gene49044:intron | 40.0% |
| !!! | CGATGCAATTTTTGAGTGAG+AGG | + | chr1.3:69935929-69935948 | None:intergenic | 40.0% |
| !!! | TGGTTTTGGTTCAGAAGAAG+AGG | - | chr1.3:69933768-69933787 | MS.gene49044:CDS | 40.0% |
| AAAAAAACCAGTCCCGCTCA+AGG | + | chr1.3:69934366-69934385 | None:intergenic | 45.0% | |
| AAAAGGGTGGTAGGTGTGAT+TGG | - | chr1.3:69936073-69936092 | MS.gene49044:CDS | 45.0% | |
| AGCTAAGATTTCCGCTCTCT+GGG | - | chr1.3:69935424-69935443 | MS.gene49044:intron | 45.0% | |
| AGCTGTGAAGCCAGATAATG+TGG | - | chr1.3:69933904-69933923 | MS.gene49044:intron | 45.0% | |
| AGCTTGTAGTTGAAGTCAGG+TGG | + | chr1.3:69933671-69933690 | None:intergenic | 45.0% | |
| AGTAGAATCCGAATAGGCAC+AGG | + | chr1.3:69935490-69935509 | None:intergenic | 45.0% | |
| ATCAGGTGGTCAAACTGCTT+TGG | - | chr1.3:69934606-69934625 | MS.gene49044:intron | 45.0% | |
| CAAAACACGGACCTTGAACA+TGG | + | chr1.3:69935298-69935317 | None:intergenic | 45.0% | |
| CAAGAGTTTAGTGAGGGACA+CGG | - | chr1.3:69936219-69936238 | MS.gene49044:CDS | 45.0% | |
| CAGCCAAATCAAGCAACTCA+GGG | + | chr1.3:69933736-69933755 | None:intergenic | 45.0% | |
| CATGTATAAGAGGCGGCAAT+AGG | + | chr1.3:69935882-69935901 | None:intergenic | 45.0% | |
| CCCTCACTAAACTCTTGACT+AGG | + | chr1.3:69936216-69936235 | None:intergenic | 45.0% | |
| CGGTGATTGGCATTGTCTTA+TGG | - | chr1.3:69936239-69936258 | MS.gene49044:CDS | 45.0% | |
| GCAGATTTCATTTCCAGAGC+TGG | - | chr1.3:69934284-69934303 | MS.gene49044:intron | 45.0% | |
| GTGCCTATTCGGATTCTACT+CGG | - | chr1.3:69935490-69935509 | MS.gene49044:CDS | 45.0% | |
| GTGGTAGGTGTGATTGGAAA+AGG | - | chr1.3:69936079-69936098 | MS.gene49044:CDS | 45.0% | |
| TAGCTAAGATTTCCGCTCTC+TGG | - | chr1.3:69935423-69935442 | MS.gene49044:intron | 45.0% | |
| TAGGACTTGTCACACGCAAA+AGG | + | chr1.3:69935958-69935977 | None:intergenic | 45.0% | |
| TCAGCCAAATCAAGCAACTC+AGG | + | chr1.3:69933737-69933756 | None:intergenic | 45.0% | |
| TCATTCCTCCAAGAAGGAAC+AGG | + | chr1.3:69933800-69933819 | None:intergenic | 45.0% | |
| TGAGATTTCGAGACCTTGCT+GGG | - | chr1.3:69936149-69936168 | MS.gene49044:CDS | 45.0% | |
| TTACCTCATCTCCAAAAGGG+CGG | + | chr1.3:69934684-69934703 | None:intergenic | 45.0% | |
| TTGAGATTTCGAGACCTTGC+TGG | - | chr1.3:69936148-69936167 | MS.gene49044:CDS | 45.0% | |
| TTGTAGTTGAAGTCAGGTGG+TGG | + | chr1.3:69933668-69933687 | None:intergenic | 45.0% | |
| TTTGGCTGACAATGGTAGCT+TGG | - | chr1.3:69933748-69933767 | MS.gene49044:CDS | 45.0% | |
| ! | AGAGCGTCTAGGATATCTAC+CGG | - | chr1.3:69935265-69935284 | MS.gene49044:intron | 45.0% |
| ! | ATCTTGCATGGTCTCTGAAG+CGG | - | chr1.3:69936029-69936048 | MS.gene49044:CDS | 45.0% |
| !! | AGTTGGCGCACAACTAGTTT+TGG | - | chr1.3:69934814-69934833 | MS.gene49044:intron | 45.0% |
| !! | CGAAAAGTGTCAGAGGAAGT+TGG | - | chr1.3:69934797-69934816 | MS.gene49044:CDS | 45.0% |
| !! | GAGCATGGAAGGCTTTGAAT+TGG | - | chr1.3:69935051-69935070 | MS.gene49044:CDS | 45.0% |
| !! | GGGGAAGGTTGATTTTATGG+TGG | + | chr1.3:69933576-69933595 | None:intergenic | 45.0% |
| !!! | GTTGGCGCACAACTAGTTTT+GGG | - | chr1.3:69934815-69934834 | MS.gene49044:intron | 45.0% |
| !!! | TTGAGCGGGACTGGTTTTTT+TGG | - | chr1.3:69934365-69934384 | MS.gene49044:intron | 45.0% |
| AGCATACATGATCCCAGCTC+TGG | + | chr1.3:69934300-69934319 | None:intergenic | 50.0% | |
| ATAAGAGGCGGCAATAGGGA+TGG | + | chr1.3:69935877-69935896 | None:intergenic | 50.0% | |
| CCTTGGAACCTGTGCCTATT+CGG | - | chr1.3:69935479-69935498 | MS.gene49044:CDS | 50.0% | |
| GAGCCGAGTAGAATCCGAAT+AGG | + | chr1.3:69935496-69935515 | None:intergenic | 50.0% | |
| GATATCCTAGACGCTCTACC+CGG | + | chr1.3:69935262-69935281 | None:intergenic | 50.0% | |
| TGCGTGTGACAAGTCCTACA+AGG | - | chr1.3:69935960-69935979 | MS.gene49044:CDS | 50.0% | |
| TTAGTGAGGGACACGGTGAT+TGG | - | chr1.3:69936226-69936245 | MS.gene49044:CDS | 50.0% | |
| TTGGTCCTGTTCCTTCTTGG+AGG | - | chr1.3:69933792-69933811 | MS.gene49044:CDS | 50.0% | |
| ! | ATGATGGGGCTTCTAATGGC+TGG | - | chr1.3:69936182-69936201 | MS.gene49044:CDS | 50.0% |
| ! | ATGTTTTCCTTGAGCGGGAC+TGG | - | chr1.3:69934356-69934375 | MS.gene49044:intron | 50.0% |
| ! | CGGTTTTCGTTGGGAATCCT+TGG | - | chr1.3:69935462-69935481 | MS.gene49044:CDS | 50.0% |
| ! | GGTTTGGTCCTGTTCCTTCT+TGG | - | chr1.3:69933789-69933808 | MS.gene49044:CDS | 50.0% |
| ! | GTAGCTTCAGAGAGCATGGA+AGG | - | chr1.3:69935040-69935059 | MS.gene49044:CDS | 50.0% |
| ! | TAGTTGAAGTCAGGTGGTGG+AGG | + | chr1.3:69933665-69933684 | None:intergenic | 50.0% |
| !! | CTTGGGAGTTGTAGCCTTGT+AGG | + | chr1.3:69935977-69935996 | None:intergenic | 50.0% |
| CCGAATAGGCACAGGTTCCA+AGG | + | chr1.3:69935482-69935501 | None:intergenic | 55.0% | |
| CCTTGAACATGGCACACTGC+CGG | + | chr1.3:69935287-69935306 | None:intergenic | 55.0% | |
| CTGGGCACCCTACTAAGCTA+CGG | - | chr1.3:69935442-69935461 | MS.gene49044:intron | 55.0% | |
| ! | TTAGTAGGGTGCCCAGAGAG+CGG | + | chr1.3:69935438-69935457 | None:intergenic | 55.0% |
| !! | ATGGTCTCTGAAGCGGAGCA+AGG | - | chr1.3:69936036-69936055 | MS.gene49044:CDS | 55.0% |
| !! | CGCTGCTCGAAAAGTGTCAG+AGG | - | chr1.3:69934790-69934809 | MS.gene49044:CDS | 55.0% |
| !! | CTGACACTTTTCGAGCAGCG+CGG | + | chr1.3:69934790-69934809 | None:intergenic | 55.0% |
| !! | TGACCGCCCTTTTGGAGATG+AGG | - | chr1.3:69934678-69934697 | MS.gene49044:intron | 55.0% |
| CCGGCAGTGTGCCATGTTCA+AGG | - | chr1.3:69935284-69935303 | MS.gene49044:intron | 60.0% | |
| CTAGACGCTCTACCCGGAAC+AGG | + | chr1.3:69935256-69935275 | None:intergenic | 60.0% | |
| ! | CTGTTCCGGGTAGAGCGTCT+AGG | - | chr1.3:69935254-69935273 | MS.gene49044:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 69933566 | 69936303 | 69933566 | ID=MS.gene49044 |
| chr1.3 | mRNA | 69933566 | 69936303 | 69933566 | ID=MS.gene49044.t1;Parent=MS.gene49044 |
| chr1.3 | exon | 69935931 | 69936303 | 69935931 | ID=MS.gene49044.t1.exon1;Parent=MS.gene49044.t1 |
| chr1.3 | CDS | 69935931 | 69936303 | 69935931 | ID=cds.MS.gene49044.t1;Parent=MS.gene49044.t1 |
| chr1.3 | exon | 69935456 | 69935581 | 69935456 | ID=MS.gene49044.t1.exon2;Parent=MS.gene49044.t1 |
| chr1.3 | CDS | 69935456 | 69935581 | 69935456 | ID=cds.MS.gene49044.t1;Parent=MS.gene49044.t1 |
| chr1.3 | exon | 69935170 | 69935258 | 69935170 | ID=MS.gene49044.t1.exon3;Parent=MS.gene49044.t1 |
| chr1.3 | CDS | 69935170 | 69935258 | 69935170 | ID=cds.MS.gene49044.t1;Parent=MS.gene49044.t1 |
| chr1.3 | exon | 69935010 | 69935084 | 69935010 | ID=MS.gene49044.t1.exon4;Parent=MS.gene49044.t1 |
| chr1.3 | CDS | 69935010 | 69935084 | 69935010 | ID=cds.MS.gene49044.t1;Parent=MS.gene49044.t1 |
| chr1.3 | exon | 69934718 | 69934825 | 69934718 | ID=MS.gene49044.t1.exon5;Parent=MS.gene49044.t1 |
| chr1.3 | CDS | 69934718 | 69934825 | 69934718 | ID=cds.MS.gene49044.t1;Parent=MS.gene49044.t1 |
| chr1.3 | exon | 69933957 | 69934058 | 69933957 | ID=MS.gene49044.t1.exon6;Parent=MS.gene49044.t1 |
| chr1.3 | CDS | 69933957 | 69934058 | 69933957 | ID=cds.MS.gene49044.t1;Parent=MS.gene49044.t1 |
| chr1.3 | exon | 69933566 | 69933841 | 69933566 | ID=MS.gene49044.t1.exon7;Parent=MS.gene49044.t1 |
| chr1.3 | CDS | 69933566 | 69933841 | 69933566 | ID=cds.MS.gene49044.t1;Parent=MS.gene49044.t1 |
| Gene Sequence |
| Protein sequence |
