AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene68876


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68876.t1 MTR_2g025120 87.043 301 37 2 1 300 9 308 0.0 536
MS.gene68876.t1 MTR_3g083370 75.974 308 70 2 1 307 9 313 4.42e-176 489
MS.gene68876.t1 MTR_5g085330 73.927 303 76 2 1 302 10 310 1.97e-169 473
MS.gene68876.t1 MTR_2g025120 88.837 215 24 0 1 215 9 223 2.49e-139 393
MS.gene68876.t1 MTR_3g083370 78.605 215 46 0 1 215 9 223 1.77e-126 360
MS.gene68876.t1 MTR_3g088565 53.465 303 128 5 4 298 11 308 1.16e-104 308
MS.gene68876.t1 MTR_4g132770 97.826 138 3 0 146 283 24 161 2.80e-97 284
MS.gene68876.t1 MTR_6g092620 47.475 297 142 5 4 296 11 297 6.84e-95 283
MS.gene68876.t1 MTR_4g132765 92.903 155 10 1 1 155 9 162 1.41e-84 274
MS.gene68876.t1 MTR_5g082750 37.171 304 180 5 1 297 57 356 1.13e-64 207
MS.gene68876.t1 MTR_3g070860 36.949 295 175 5 10 297 67 357 5.50e-61 198
MS.gene68876.t1 MTR_7g068650 35.275 309 183 6 1 297 59 362 4.15e-58 191
MS.gene68876.t1 MTR_4g015790 34.694 294 182 4 9 295 78 368 3.04e-57 189
MS.gene68876.t1 MTR_3g063180 37.755 294 161 10 3 280 49 336 2.88e-54 181
MS.gene68876.t1 MTR_3g092890 33.569 283 172 6 3 276 42 317 1.17e-52 176
MS.gene68876.t1 MTR_8g024120 34.021 291 163 7 1 276 47 323 7.99e-51 171
MS.gene68876.t1 MTR_0009s0050 31.944 288 184 4 8 288 58 340 2.28e-50 170
MS.gene68876.t1 MTR_5g055680 32.180 289 182 5 8 288 58 340 2.56e-50 170
MS.gene68876.t1 MTR_0009s0050 31.944 288 184 4 8 288 58 340 2.69e-50 170
MS.gene68876.t1 MTR_8g064200 29.966 297 192 5 1 288 57 346 3.45e-50 170
MS.gene68876.t1 MTR_8g064200 29.966 297 192 5 1 288 62 351 4.56e-50 170
MS.gene68876.t1 MTR_2g072890 31.650 297 188 7 1 288 57 347 1.02e-49 169
MS.gene68876.t1 MTR_5g048570 31.597 288 185 5 8 288 56 338 3.11e-49 167
MS.gene68876.t1 MTR_5g048550 30.796 289 186 5 8 288 58 340 3.74e-48 164
MS.gene68876.t1 MTR_1g033810 34.848 264 162 5 2 258 54 314 3.83e-48 165
MS.gene68876.t1 MTR_2g437380 33.775 302 167 7 5 288 62 348 6.58e-48 164
MS.gene68876.t1 MTR_5g048470 28.956 297 195 5 1 288 58 347 7.47e-48 164
MS.gene68876.t1 MTR_0328s0030 31.034 290 184 6 8 288 56 338 4.57e-47 162
MS.gene68876.t1 MTR_7g062580 33.094 278 172 5 19 288 77 348 6.06e-46 159
MS.gene68876.t1 MTR_5g055900 30.556 288 188 4 8 288 58 340 6.99e-46 159
MS.gene68876.t1 MTR_7g062550 33.453 278 171 5 19 288 82 353 1.34e-45 158
MS.gene68876.t1 MTR_7g062570 31.667 300 179 7 1 288 63 348 3.16e-45 157
MS.gene68876.t1 MTR_5g032880 35.636 275 158 7 16 278 52 319 4.76e-45 162
MS.gene68876.t1 MTR_5g032880 35.472 265 155 6 7 258 386 647 1.98e-42 155
MS.gene68876.t1 MTR_5g055690 29.412 289 191 4 8 288 58 341 5.69e-45 156
MS.gene68876.t1 MTR_5g055820 32.184 261 152 4 13 258 63 313 7.99e-45 156
MS.gene68876.t1 MTR_2g072910 31.890 254 153 4 19 260 75 320 8.19e-45 156
MS.gene68876.t1 MTR_3g117420 32.872 289 178 8 16 296 73 353 8.77e-45 155
MS.gene68876.t1 MTR_1g070080 35.385 260 151 6 8 257 50 302 9.33e-45 155
MS.gene68876.t1 MTR_4g116010 34.118 255 159 3 13 260 64 316 1.38e-44 155
MS.gene68876.t1 MTR_7g016090 32.450 302 181 9 3 294 43 331 1.39e-44 155
MS.gene68876.t1 MTR_7g016090 33.003 303 178 10 3 294 45 333 1.47e-44 155
MS.gene68876.t1 MTR_8g009080 35.769 260 148 7 12 260 112 363 1.57e-44 156
MS.gene68876.t1 MTR_0009s0480 32.308 260 162 5 8 258 57 311 2.34e-44 154
MS.gene68876.t1 MTR_5g032870 36.090 266 148 7 11 260 52 311 4.56e-44 154
MS.gene68876.t1 MTR_2g069090 35.178 253 147 5 2 246 78 321 1.16e-43 153
MS.gene68876.t1 MTR_8g074050 32.862 283 175 7 16 290 73 348 2.27e-43 152
MS.gene68876.t1 MTR_2g069210 36.207 290 162 12 2 280 74 351 3.15e-43 152
MS.gene68876.t1 MTR_2g083030 31.228 285 169 7 3 278 46 312 3.92e-43 151
MS.gene68876.t1 MTR_7g062600 31.900 279 175 6 19 288 73 345 3.99e-43 152
MS.gene68876.t1 MTR_1g070135 32.192 292 174 8 3 280 42 323 4.25e-43 151
MS.gene68876.t1 MTR_2g068950 32.423 293 169 10 16 290 85 366 4.75e-43 152
MS.gene68876.t1 MTR_5g065010 30.714 280 184 7 5 279 51 325 7.21e-43 150
MS.gene68876.t1 MTR_5g005570 31.849 292 163 9 1 278 42 311 7.39e-43 150
MS.gene68876.t1 MTR_2g069300 35.169 236 140 5 16 244 76 305 8.34e-43 150
MS.gene68876.t1 MTR_5g048850 29.457 258 172 3 8 258 58 312 1.42e-42 150
MS.gene68876.t1 MTR_1g093140 32.090 268 165 7 3 261 82 341 3.43e-42 149
MS.gene68876.t1 MTR_5g048740 27.778 288 197 5 8 288 56 339 4.78e-42 149
MS.gene68876.t1 MTR_1g034140 34.532 278 158 7 3 260 31 304 7.29e-42 148
MS.gene68876.t1 MTR_6g015950 32.673 303 182 8 3 295 43 333 1.24e-41 147
MS.gene68876.t1 MTR_5g011250 33.700 273 167 5 1 260 52 323 1.46e-41 147
MS.gene68876.t1 MTR_7g451860 32.333 300 165 10 14 292 54 336 1.79e-41 147
MS.gene68876.t1 MTR_7g047670 32.333 300 165 10 14 292 54 336 1.79e-41 147
MS.gene68876.t1 MTR_2g069190 35.165 273 156 9 16 277 90 352 2.03e-41 147
MS.gene68876.t1 MTR_4g117880 35.833 240 139 6 16 247 83 315 2.05e-41 147
MS.gene68876.t1 MTR_7g063730 30.169 295 185 6 19 302 86 370 2.09e-41 147
MS.gene68876.t1 MTR_8g028435 33.750 240 143 5 16 247 83 314 2.12e-41 147
MS.gene68876.t1 MTR_1g093110 29.795 292 185 9 1 280 75 358 2.13e-41 147
MS.gene68876.t1 MTR_2g083000 32.616 279 166 8 4 276 43 305 3.02e-41 146
MS.gene68876.t1 MTR_2g069020 34.118 255 152 6 16 260 89 337 4.46e-41 146
MS.gene68876.t1 MTR_8g009160 33.191 235 145 4 16 244 83 311 4.90e-41 146
MS.gene68876.t1 MTR_1g043760 33.447 293 179 7 9 293 69 353 6.17e-41 145
MS.gene68876.t1 MTR_2g069010 31.944 288 161 9 16 285 91 361 6.46e-41 146
MS.gene68876.t1 MTR_2g069020 34.118 255 152 6 16 260 89 337 9.29e-41 146
MS.gene68876.t1 MTR_5g022020 34.677 248 147 7 16 253 61 303 9.59e-41 145
MS.gene68876.t1 MTR_2g068960 31.741 293 171 10 16 290 85 366 9.78e-41 145
MS.gene68876.t1 MTR_8g075890 34.252 254 154 6 9 253 54 303 1.39e-40 145
MS.gene68876.t1 MTR_4g093840 32.394 284 179 6 3 279 72 349 1.98e-40 144
MS.gene68876.t1 MTR_1g062110 31.387 274 149 7 9 258 79 337 3.21e-40 144
MS.gene68876.t1 MTR_3g026150 31.849 292 183 8 2 285 67 350 3.60e-40 144
MS.gene68876.t1 MTR_2g069060 32.812 256 151 6 16 260 71 316 8.08e-40 142
MS.gene68876.t1 MTR_1g070085 30.634 284 177 8 8 280 49 323 1.05e-39 142
MS.gene68876.t1 MTR_1g070085 30.634 284 177 8 8 280 49 323 1.05e-39 142
MS.gene68876.t1 MTR_3g072820 34.138 290 173 9 5 285 49 329 1.37e-39 142
MS.gene68876.t1 MTR_8g075830 33.071 254 157 6 9 253 54 303 2.58e-39 142
MS.gene68876.t1 MTR_1g034120 31.392 309 177 9 16 304 54 347 2.67e-39 141
MS.gene68876.t1 MTR_4g087140 33.333 282 157 8 5 260 37 313 3.19e-39 141
MS.gene68876.t1 MTR_4g087110 32.830 265 154 7 16 260 52 312 5.02e-39 140
MS.gene68876.t1 MTR_0056s0160 31.718 227 146 4 65 288 5 225 5.04e-39 137
MS.gene68876.t1 MTR_8g009090 32.927 246 135 5 16 246 83 313 7.58e-39 140
MS.gene68876.t1 MTR_0009s0050 31.950 241 156 4 50 288 8 242 7.94e-39 137
MS.gene68876.t1 MTR_8g074070 32.806 253 159 6 16 260 73 322 1.03e-38 140
MS.gene68876.t1 MTR_1g070120 32.707 266 156 8 8 260 50 305 1.09e-38 139
MS.gene68876.t1 MTR_0009s0050 31.950 241 156 4 50 288 8 242 1.20e-38 137
MS.gene68876.t1 MTR_1g093120 31.136 273 167 9 1 260 72 336 1.27e-38 140
MS.gene68876.t1 MTR_8g009110 32.489 237 149 4 16 246 83 314 1.75e-38 139
MS.gene68876.t1 MTR_8g009170 33.061 245 143 7 13 246 80 314 1.82e-38 139
MS.gene68876.t1 MTR_1g034060 31.068 309 178 9 16 304 54 347 2.24e-38 139
MS.gene68876.t1 MTR_4g087090 32.308 260 156 6 16 260 57 311 2.47e-38 139
MS.gene68876.t1 MTR_5g055800 27.148 291 193 7 8 288 58 339 4.53e-38 138
MS.gene68876.t1 MTR_4g074130 32.509 283 168 9 1 276 48 314 8.59e-38 137
MS.gene68876.t1 MTR_7g102820 29.348 276 162 5 9 260 80 346 1.25e-37 137
MS.gene68876.t1 MTR_1g043770 34.298 242 146 5 9 244 68 302 1.58e-37 137
MS.gene68876.t1 MTR_7g105070 34.836 244 130 8 16 244 80 309 1.80e-37 137
MS.gene68876.t1 MTR_2g102570 29.710 276 177 7 14 277 64 334 3.19e-37 136
MS.gene68876.t1 MTR_4g024660 29.880 251 154 6 9 248 82 321 3.63e-37 136
MS.gene68876.t1 MTR_4g087120 32.319 263 154 7 16 258 52 310 4.07e-37 135
MS.gene68876.t1 MTR_7g045650 34.259 216 132 3 19 227 82 294 7.11e-37 134
MS.gene68876.t1 MTR_5g059130 32.867 286 175 8 3 277 48 327 8.25e-37 134
MS.gene68876.t1 MTR_8g041620 32.210 267 163 8 3 258 79 338 8.47e-37 135
MS.gene68876.t1 MTR_3g117485 28.571 259 169 6 13 260 69 322 8.70e-37 135
MS.gene68876.t1 MTR_3g091350 34.137 249 148 6 19 258 85 326 1.08e-36 135
MS.gene68876.t1 MTR_8g062600 28.571 259 159 7 3 248 76 321 1.21e-36 135
MS.gene68876.t1 MTR_8g041600 32.707 266 163 6 3 258 79 338 1.23e-36 135
MS.gene68876.t1 MTR_6g464620 29.897 291 179 8 1 273 69 352 1.28e-36 135
MS.gene68876.t1 MTR_8g008930 33.058 242 141 7 16 246 83 314 1.70e-36 134
MS.gene68876.t1 MTR_2g437380 32.714 269 148 7 38 288 1 254 1.88e-36 132
MS.gene68876.t1 MTR_3g072810 31.295 278 173 6 16 279 56 329 3.02e-36 133
MS.gene68876.t1 MTR_3g464530 31.452 248 152 4 16 251 47 288 3.57e-36 132
MS.gene68876.t1 MTR_8g074070 33.200 250 143 6 16 260 73 303 4.59e-36 132
MS.gene68876.t1 MTR_1g043775 33.891 239 144 6 13 244 73 304 5.48e-36 132
MS.gene68876.t1 MTR_3g058610 31.579 247 156 6 16 253 61 303 7.06e-36 132
MS.gene68876.t1 MTR_7g056347 27.931 290 189 8 3 280 76 357 1.44e-35 132
MS.gene68876.t1 MTR_7g016080 30.100 299 182 7 3 293 45 324 4.72e-35 129
MS.gene68876.t1 MTR_1g043810 31.818 242 153 4 9 244 69 304 5.34e-35 130
MS.gene68876.t1 MTR_3g117485 28.400 250 163 6 22 260 6 250 5.90e-35 128
MS.gene68876.t1 MTR_5g059140 31.970 269 165 6 5 260 49 312 7.44e-35 129
MS.gene68876.t1 MTR_3g040410 28.467 274 187 6 9 279 23 290 8.94e-35 128
MS.gene68876.t1 MTR_8g063070 28.417 278 177 8 16 280 89 357 9.88e-35 130
MS.gene68876.t1 MTR_7g081710 30.877 285 170 8 9 279 63 334 1.06e-34 129
MS.gene68876.t1 MTR_3g091360 33.068 251 158 5 16 260 75 321 3.35e-34 128
MS.gene68876.t1 MTR_3g096500 27.875 287 187 8 1 273 74 354 4.54e-34 128
MS.gene68876.t1 MTR_3g088745 31.449 283 166 11 15 279 58 330 5.68e-34 127
MS.gene68876.t1 MTR_2g019370 29.643 280 176 9 15 278 41 315 8.68e-34 126
MS.gene68876.t1 MTR_8g093980 29.278 263 168 8 10 259 75 332 1.11e-33 127
MS.gene68876.t1 MTR_8g093930 28.315 279 180 9 14 279 68 339 1.78e-33 126
MS.gene68876.t1 MTR_1g032140 33.591 259 133 8 9 247 78 317 3.01e-33 125
MS.gene68876.t1 MTR_0009s0050 39.007 141 84 1 148 288 22 160 3.76e-33 120
MS.gene68876.t1 MTR_4g115990 30.159 252 149 6 22 271 74 300 4.75e-33 124
MS.gene68876.t1 MTR_3g026150 32.917 240 149 6 50 285 16 247 5.70e-33 122
MS.gene68876.t1 MTR_8g033380 26.621 293 195 8 16 295 77 362 5.99e-33 125
MS.gene68876.t1 MTR_7g029655 31.984 247 145 8 10 244 80 315 1.13e-32 124
MS.gene68876.t1 MTR_5g055690 29.630 216 141 3 8 215 58 270 1.55e-32 121
MS.gene68876.t1 MTR_0032s0040 31.076 251 148 8 7 243 80 319 2.40e-32 123
MS.gene68876.t1 MTR_1g070185 31.250 256 159 6 8 253 78 326 2.45e-32 123
MS.gene68876.t1 MTR_5g048850 29.630 216 142 3 8 216 58 270 2.64e-32 121
MS.gene68876.t1 MTR_8g469400 29.528 254 150 7 24 260 85 326 2.81e-32 123
MS.gene68876.t1 MTR_8g006930 33.209 268 159 9 5 261 78 336 4.30e-32 122
MS.gene68876.t1 MTR_7g078010 31.250 272 165 10 3 260 76 339 4.97e-32 122
MS.gene68876.t1 MTR_1g011580 29.249 253 169 6 11 256 72 321 5.34e-32 122
MS.gene68876.t1 MTR_1g070085 32.673 202 126 4 102 303 73 264 6.16e-32 120
MS.gene68876.t1 MTR_1g102070 27.046 281 171 6 14 273 80 347 1.11e-31 121
MS.gene68876.t1 MTR_1g070100 37.107 159 96 2 102 260 69 223 1.69e-31 118
MS.gene68876.t1 MTR_1g081840 27.336 289 190 9 5 279 65 347 2.11e-31 120
MS.gene68876.t1 MTR_0009s0480 30.876 217 136 5 8 215 57 268 2.25e-31 118
MS.gene68876.t1 MTR_7g102720 29.110 292 170 9 8 280 46 319 2.37e-31 120
MS.gene68876.t1 MTR_4g119410 30.375 293 174 9 5 280 78 357 2.90e-31 120
MS.gene68876.t1 MTR_2g070870 29.010 293 181 8 8 285 34 314 3.91e-31 119
MS.gene68876.t1 MTR_2g068840 27.389 314 184 9 1 289 60 354 4.69e-31 119
MS.gene68876.t1 MTR_7g062560 26.950 282 195 6 19 299 84 355 5.52e-31 119
MS.gene68876.t1 MTR_1g048940 28.082 292 180 10 6 281 57 334 5.81e-31 119
MS.gene68876.t1 MTR_8g009080 34.135 208 121 6 12 211 112 311 6.05e-31 119
MS.gene68876.t1 MTR_8g009080 33.649 211 124 6 12 214 112 314 6.53e-31 119
MS.gene68876.t1 MTR_4g087100 27.778 270 171 7 11 260 47 312 1.01e-30 118
MS.gene68876.t1 MTR_1g027290 30.714 280 166 10 6 267 42 311 2.32e-30 117
MS.gene68876.t1 MTR_1g070135 33.040 227 130 7 3 215 42 260 4.71e-30 115
MS.gene68876.t1 MTR_1g032250 33.333 258 135 9 9 247 85 324 4.87e-30 117
MS.gene68876.t1 MTR_3g045230 30.389 283 162 10 16 280 73 338 5.33e-30 116
MS.gene68876.t1 MTR_8g461330 28.105 306 199 9 8 296 33 334 1.10e-29 115
MS.gene68876.t1 MTR_0009s0400 36.765 136 84 1 154 289 4 137 2.01e-29 110
MS.gene68876.t1 MTR_2g069060 32.381 210 122 5 16 215 49 248 3.30e-29 112
MS.gene68876.t1 MTR_2g072910 30.189 212 128 4 19 218 75 278 3.84e-29 112
MS.gene68876.t1 MTR_7g056393 28.814 295 180 9 3 280 76 357 8.32e-29 114
MS.gene68876.t1 MTR_1g032220 29.795 292 165 10 9 280 85 356 9.54e-29 114
MS.gene68876.t1 MTR_4g087130 30.483 269 164 6 11 260 47 311 1.40e-28 113
MS.gene68876.t1 MTR_8g009150 29.412 238 137 5 16 247 83 295 1.51e-28 112
MS.gene68876.t1 MTR_7g056353 32.231 242 143 8 31 261 79 310 1.78e-28 114
MS.gene68876.t1 MTR_3g026150 32.432 222 136 7 2 215 67 282 2.08e-28 111
MS.gene68876.t1 MTR_3g043900 28.777 278 172 7 16 280 73 337 9.80e-28 110
MS.gene68876.t1 MTR_8g030880 29.831 295 164 11 9 279 20 295 1.07e-27 110
MS.gene68876.t1 MTR_8g009120 29.832 238 144 6 16 247 83 303 1.65e-27 110
MS.gene68876.t1 MTR_1g043770 32.075 212 131 5 9 214 68 272 4.97e-27 107
MS.gene68876.t1 MTR_8g041600 31.507 219 138 5 3 215 79 291 2.41e-26 105
MS.gene68876.t1 MTR_1g043775 32.381 210 128 6 12 214 72 274 4.44e-26 105
MS.gene68876.t1 MTR_3g464530 29.717 212 131 4 16 215 47 252 4.92e-26 103
MS.gene68876.t1 MTR_1g062110 29.870 231 123 7 9 215 79 294 5.07e-26 105
MS.gene68876.t1 MTR_2g033270 28.276 290 191 9 6 285 25 307 6.76e-26 105
MS.gene68876.t1 MTR_8g009180 32.973 185 106 4 76 246 63 243 1.88e-25 103
MS.gene68876.t1 MTR_2g068800 31.148 244 135 8 1 233 60 281 1.99e-25 103
MS.gene68876.t1 MTR_7g077670 29.818 275 169 10 19 279 31 295 2.46e-25 103
MS.gene68876.t1 MTR_1g043810 30.189 212 136 4 9 214 69 274 2.80e-25 103
MS.gene68876.t1 MTR_4g123020 27.586 290 193 7 7 285 27 310 4.19e-25 102
MS.gene68876.t1 MTR_1g086550 27.778 306 182 11 8 285 28 322 1.16e-24 102
MS.gene68876.t1 MTR_8g009170 28.846 208 137 4 13 214 80 282 2.25e-24 100
MS.gene68876.t1 MTR_1g043840 39.130 138 80 2 106 243 52 185 6.21e-24 100
MS.gene68876.t1 MTR_5g025090 26.224 286 192 8 11 289 17 290 6.19e-23 96.7
MS.gene68876.t1 MTR_4g096840 26.449 276 185 8 15 276 42 313 7.64e-23 97.1
MS.gene68876.t1 MTR_6g088665 26.774 310 180 10 3 277 25 322 1.57e-22 96.3
MS.gene68876.t1 MTR_1g070110 31.667 180 85 4 102 280 76 218 3.67e-22 93.2
MS.gene68876.t1 MTR_6g088665 27.832 309 177 11 3 277 25 321 4.24e-22 95.1
MS.gene68876.t1 MTR_8g102600 29.740 269 151 11 13 251 26 286 7.58e-22 94.0
MS.gene68876.t1 MTR_4g100600 28.037 321 184 11 3 288 13 321 9.28e-22 93.6
MS.gene68876.t1 MTR_7g078010 29.412 221 140 8 3 215 76 288 5.87e-20 88.6
MS.gene68876.t1 MTR_4g100590 26.545 275 160 8 3 251 13 271 2.56e-19 86.7
MS.gene68876.t1 MTR_1g027310 25.746 268 155 7 5 267 61 289 7.80e-19 85.5
MS.gene68876.t1 MTR_5g027230 27.241 290 164 13 16 284 23 286 1.48e-17 81.6
MS.gene68876.t1 MTR_4g011720 31.515 165 107 4 97 260 119 278 1.69e-17 81.6
MS.gene68876.t1 MTR_5g025050 25.547 274 179 9 16 279 22 280 2.88e-17 80.9
MS.gene68876.t1 MTR_4g011690 26.374 273 177 8 3 260 16 279 4.74e-16 77.4
MS.gene68876.t1 MTR_1g032240 42.105 95 44 3 154 247 64 148 7.41e-16 74.7
MS.gene68876.t1 MTR_5g024940 25.185 270 166 9 16 279 23 262 1.44e-15 75.9
MS.gene68876.t1 MTR_4g021380 27.273 220 136 7 87 286 93 308 8.41e-15 73.9
MS.gene68876.t1 MTR_8g102600 33.333 162 88 7 102 251 83 236 1.47e-14 72.8
MS.gene68876.t1 MTR_3g108520 26.519 181 127 5 102 280 125 301 6.87e-14 71.2
MS.gene68876.t1 MTR_3g040440 46.875 64 33 1 165 228 16 78 4.92e-13 68.2
MS.gene68876.t1 MTR_4g100590 33.333 141 75 6 120 251 94 224 2.29e-12 66.2
MS.gene68876.t1 MTR_4g011720 32.500 120 75 4 97 215 119 233 5.55e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68876.t1 AT1G05010 71.429 315 82 3 1 307 9 323 6.91e-169 471
MS.gene68876.t1 AT1G12010 71.667 300 81 1 1 300 12 307 3.23e-166 464
MS.gene68876.t1 AT1G62380 69.805 308 88 2 1 307 12 315 4.36e-164 459
MS.gene68876.t1 AT1G77330 52.288 306 126 6 4 298 11 307 4.99e-103 304
MS.gene68876.t1 AT2G19590 47.475 297 143 4 4 298 19 304 9.09e-103 303
MS.gene68876.t1 AT2G19590 48.000 275 130 4 26 298 26 289 7.86e-94 280
MS.gene68876.t1 AT5G24530 34.722 288 173 6 3 280 42 324 3.47e-56 185
MS.gene68876.t1 AT5G05600 36.301 292 161 8 1 276 67 349 3.00e-55 184
MS.gene68876.t1 AT2G38240 33.929 280 172 4 9 279 59 334 1.10e-54 181
MS.gene68876.t1 AT3G11180 36.940 268 159 4 16 276 114 378 1.47e-54 182
MS.gene68876.t1 AT3G11180 36.940 268 159 4 16 276 114 378 1.65e-54 182
MS.gene68876.t1 AT4G16330 36.426 291 166 8 1 278 67 351 2.88e-54 181
MS.gene68876.t1 AT1G78550 36.032 247 148 5 19 258 77 320 3.36e-52 175
MS.gene68876.t1 AT3G55970 34.409 279 173 5 9 279 68 344 1.95e-51 173
MS.gene68876.t1 AT4G10490 32.881 295 187 5 1 288 47 337 5.05e-51 172
MS.gene68876.t1 AT4G10500 33.216 283 177 6 1 276 49 326 9.02e-51 171
MS.gene68876.t1 AT1G17020 33.969 262 165 3 11 265 69 329 5.51e-48 164
MS.gene68876.t1 AT1G17010 33.984 256 160 3 11 259 70 323 9.84e-48 164
MS.gene68876.t1 AT4G25310 35.484 248 148 4 19 259 76 318 3.38e-47 162
MS.gene68876.t1 AT1G78550 34.440 241 148 5 25 258 5 242 7.62e-46 156
MS.gene68876.t1 AT4G21200 36.800 250 144 7 7 251 56 296 1.91e-45 157
MS.gene68876.t1 AT4G25300 32.422 256 164 3 11 259 68 321 1.36e-44 155
MS.gene68876.t1 AT5G08640 32.281 285 176 6 3 276 47 325 1.62e-44 155
MS.gene68876.t1 AT5G08640 32.281 285 176 6 3 276 47 325 1.62e-44 155
MS.gene68876.t1 AT1G06620 33.793 290 171 7 9 287 77 356 2.12e-44 155
MS.gene68876.t1 AT5G20400 30.201 298 185 6 5 290 56 342 1.03e-43 153
MS.gene68876.t1 AT4G16330 40.976 205 114 5 76 278 46 245 4.86e-43 149
MS.gene68876.t1 AT5G59530 33.212 274 157 7 3 260 67 330 5.35e-43 151
MS.gene68876.t1 AT3G21420 34.028 288 174 8 13 289 73 355 8.41e-43 151
MS.gene68876.t1 AT1G49390 32.157 255 164 3 13 260 64 316 8.00e-42 148
MS.gene68876.t1 AT5G59540 32.986 288 168 9 5 274 72 352 2.97e-41 147
MS.gene68876.t1 AT3G51240 35.628 247 146 6 16 253 60 302 4.29e-41 146
MS.gene68876.t1 AT3G19010 34.672 274 155 6 5 258 38 307 7.70e-41 145
MS.gene68876.t1 AT3G19010 34.672 274 155 6 5 258 38 307 7.70e-41 145
MS.gene68876.t1 AT3G61400 36.220 254 143 9 2 244 73 318 1.02e-40 145
MS.gene68876.t1 AT1G55290 31.707 287 175 9 5 280 69 345 1.05e-40 145
MS.gene68876.t1 AT5G20550 33.333 255 156 6 16 260 67 317 3.43e-40 144
MS.gene68876.t1 AT2G30830 33.696 276 163 9 5 271 66 330 3.66e-40 144
MS.gene68876.t1 AT5G54000 32.143 252 162 5 16 260 68 317 4.46e-40 143
MS.gene68876.t1 AT1G03410 33.712 264 156 9 9 260 72 328 5.06e-40 143
MS.gene68876.t1 AT5G43450 32.841 271 155 8 5 260 70 328 6.05e-40 143
MS.gene68876.t1 AT1G03410 33.585 265 157 9 8 260 108 365 1.08e-39 143
MS.gene68876.t1 AT3G12900 30.693 303 182 10 1 289 61 349 1.37e-39 142
MS.gene68876.t1 AT4G22880 32.319 263 165 4 1 251 52 313 2.42e-39 142
MS.gene68876.t1 AT4G22880 32.319 263 165 4 1 251 52 313 2.42e-39 142
MS.gene68876.t1 AT4G22880 32.319 263 165 4 1 251 52 313 2.42e-39 142
MS.gene68876.t1 AT1G06650 33.582 268 152 9 8 260 79 335 3.02e-39 142
MS.gene68876.t1 AT3G13610 29.655 290 182 8 3 280 66 345 5.94e-39 140
MS.gene68876.t1 AT1G49390 33.054 239 151 3 29 260 1 237 8.05e-39 138
MS.gene68876.t1 AT2G36690 31.086 267 154 7 9 258 74 327 1.22e-38 140
MS.gene68876.t1 AT2G36690 31.086 267 154 7 9 258 74 327 1.22e-38 140
MS.gene68876.t1 AT2G30840 32.734 278 161 9 6 271 71 334 4.46e-38 138
MS.gene68876.t1 AT1G04350 35.798 257 146 10 16 260 77 326 5.63e-38 138
MS.gene68876.t1 AT3G19000 34.432 273 155 7 8 260 46 314 5.72e-38 138
MS.gene68876.t1 AT5G05600 35.065 231 127 7 1 215 67 290 6.11e-38 136
MS.gene68876.t1 AT1G06640 32.270 282 173 8 11 282 82 355 6.58e-38 138
MS.gene68876.t1 AT5G43440 32.677 254 157 6 16 260 83 331 1.12e-37 137
MS.gene68876.t1 AT5G54000 32.636 239 152 5 29 260 1 237 1.47e-37 134
MS.gene68876.t1 AT1G80340 28.723 282 177 7 15 281 63 335 1.87e-37 136
MS.gene68876.t1 AT3G55970 33.488 215 135 3 9 215 68 282 5.19e-37 134
MS.gene68876.t1 AT1G04380 31.818 286 172 9 7 280 55 329 5.67e-37 135
MS.gene68876.t1 AT1G15550 29.496 278 178 7 16 281 71 342 6.98e-37 135
MS.gene68876.t1 AT4G25420 28.966 290 181 8 8 279 72 354 1.36e-36 135
MS.gene68876.t1 AT5G07200 27.719 285 187 4 10 279 75 355 1.02e-35 132
MS.gene68876.t1 AT5G63590 33.217 286 168 10 5 276 21 297 1.20e-35 130
MS.gene68876.t1 AT1G03400 34.711 242 145 7 10 244 64 299 1.49e-35 131
MS.gene68876.t1 AT5G63595 32.411 253 141 8 16 258 42 274 2.49e-35 129
MS.gene68876.t1 AT1G60980 28.014 282 177 6 15 279 79 351 5.93e-35 130
MS.gene68876.t1 AT2G25450 31.970 269 166 8 5 262 66 328 6.51e-35 130
MS.gene68876.t1 AT1G06645 32.308 260 157 7 11 260 95 345 1.91e-34 129
MS.gene68876.t1 AT2G30840 32.014 278 157 10 6 271 71 328 7.35e-34 127
MS.gene68876.t1 AT3G19010 31.752 274 133 6 5 258 38 277 8.84e-34 126
MS.gene68876.t1 AT1G78440 29.197 274 172 9 19 276 35 302 4.55e-33 124
MS.gene68876.t1 AT1G80330 28.620 297 192 9 15 298 62 351 8.21e-33 124
MS.gene68876.t1 AT5G51810 27.304 293 190 7 4 279 66 352 1.34e-32 124
MS.gene68876.t1 AT4G25310 30.645 248 132 4 19 259 76 290 2.62e-32 122
MS.gene68876.t1 AT5G63600 30.961 281 174 9 6 277 41 310 3.65e-32 122
MS.gene68876.t1 AT3G61400 35.714 224 126 8 2 215 73 288 3.74e-32 121
MS.gene68876.t1 AT3G51240 38.122 181 104 4 77 253 42 218 4.08e-32 120
MS.gene68876.t1 AT1G06620 33.953 215 126 5 9 215 77 283 9.92e-32 120
MS.gene68876.t1 AT2G44800 29.078 282 177 10 16 285 73 343 1.17e-31 121
MS.gene68876.t1 AT3G60290 31.022 274 166 10 16 277 73 335 2.58e-31 120
MS.gene68876.t1 AT5G63600 31.206 282 173 10 6 277 41 311 2.89e-31 119
MS.gene68876.t1 AT4G25300 33.962 159 103 1 102 260 72 228 5.59e-31 117
MS.gene68876.t1 AT3G19000 32.627 236 135 7 8 223 46 277 6.33e-31 117
MS.gene68876.t1 AT5G43450 32.877 219 123 7 5 211 70 276 1.12e-30 117
MS.gene68876.t1 AT3G19010 33.761 234 131 6 5 218 38 267 2.75e-30 116
MS.gene68876.t1 AT1G03400 31.852 270 143 8 10 244 64 327 4.05e-30 117
MS.gene68876.t1 AT1G30040 29.720 286 181 13 4 276 34 312 4.34e-30 117
MS.gene68876.t1 AT5G07480 28.571 287 180 10 7 277 57 334 8.00e-30 116
MS.gene68876.t1 AT1G50960 27.381 252 171 5 1 245 45 291 1.71e-29 115
MS.gene68876.t1 AT1G06640 31.797 217 136 5 11 221 82 292 3.04e-29 114
MS.gene68876.t1 AT1G06650 32.569 218 125 7 8 214 79 285 3.84e-29 113
MS.gene68876.t1 AT2G30840 32.093 215 134 5 6 214 71 279 9.38e-29 112
MS.gene68876.t1 AT4G23340 30.882 272 170 10 19 279 30 294 1.37e-28 112
MS.gene68876.t1 AT1G06640 32.850 207 127 5 11 211 82 282 1.77e-28 111
MS.gene68876.t1 AT5G59540 31.364 220 135 7 5 215 72 284 1.31e-27 108
MS.gene68876.t1 AT1G44090 27.241 290 193 7 3 279 73 357 5.32e-27 109
MS.gene68876.t1 AT5G43440 31.683 202 127 5 16 211 83 279 1.00e-26 106
MS.gene68876.t1 AT3G47190 29.961 257 156 7 13 250 42 293 4.77e-26 105
MS.gene68876.t1 AT1G04380 30.415 217 135 6 7 215 55 263 5.18e-26 104
MS.gene68876.t1 AT3G50210 28.826 281 171 9 10 269 32 304 5.82e-26 105
MS.gene68876.t1 AT3G50210 28.826 281 171 9 10 269 32 304 5.82e-26 105
MS.gene68876.t1 AT3G50210 28.826 281 171 9 10 269 32 304 5.82e-26 105
MS.gene68876.t1 AT4G21690 25.524 286 186 10 15 281 60 337 9.29e-26 105
MS.gene68876.t1 AT1G47990 25.753 299 199 9 3 286 19 309 1.15e-25 104
MS.gene68876.t1 AT2G34555 27.304 293 173 10 6 276 33 307 1.14e-24 102
MS.gene68876.t1 AT5G43935 29.818 275 147 11 19 277 39 283 2.03e-24 100
MS.gene68876.t1 AT3G49620 26.644 289 181 9 3 270 48 326 2.71e-24 101
MS.gene68876.t1 AT5G07480 33.516 182 109 5 102 277 50 225 4.21e-24 98.6
MS.gene68876.t1 AT5G51310 27.431 288 185 10 11 279 17 299 4.60e-24 100
MS.gene68876.t1 AT5G12270 28.082 292 180 9 16 289 73 352 1.16e-23 99.8
MS.gene68876.t1 AT5G63580 31.140 228 127 8 5 215 26 240 6.08e-23 95.5
MS.gene68876.t1 AT3G49630 26.014 296 193 9 5 277 25 317 7.61e-23 97.1
MS.gene68876.t1 AT3G49630 26.014 296 193 9 5 277 21 313 9.17e-23 96.7
MS.gene68876.t1 AT5G63580 30.973 226 126 8 5 213 26 238 1.15e-22 94.7
MS.gene68876.t1 AT1G02400 27.742 310 200 13 3 298 30 329 3.06e-22 95.1
MS.gene68876.t1 AT4G25420 28.319 226 139 7 8 215 72 292 3.59e-21 91.7
MS.gene68876.t1 AT1G14130 27.823 248 168 5 16 258 26 267 5.57e-21 91.3
MS.gene68876.t1 AT5G51810 27.586 232 147 6 4 218 66 293 1.36e-20 90.1
MS.gene68876.t1 AT5G58660 24.535 269 170 6 14 251 45 311 2.78e-20 90.1
MS.gene68876.t1 AT4G23340 32.044 181 111 7 106 279 1 176 3.11e-19 84.7
MS.gene68876.t1 AT1G35190 27.304 293 172 9 16 277 29 311 2.77e-18 84.3
MS.gene68876.t1 AT1G14120 27.848 237 154 7 14 242 23 250 3.61e-18 83.6
MS.gene68876.t1 AT1G14120 27.848 237 154 7 14 242 23 250 3.61e-18 83.6
MS.gene68876.t1 AT1G14120 27.848 237 154 7 14 242 23 250 3.61e-18 83.6
MS.gene68876.t1 AT1G35190 26.280 293 152 10 16 277 29 288 4.34e-18 83.2
MS.gene68876.t1 AT3G46490 25.597 293 153 9 3 251 21 292 2.07e-17 81.6
MS.gene68876.t1 AT3G50210 30.000 190 116 5 90 269 40 222 2.89e-17 80.1
MS.gene68876.t1 AT3G49630 27.919 197 133 5 89 277 49 244 4.30e-17 79.7
MS.gene68876.t1 AT3G46500 25.758 264 171 9 1 245 22 279 2.09e-14 72.8
MS.gene68876.t1 AT3G46490 24.823 282 147 9 3 240 21 281 4.06e-14 72.0
MS.gene68876.t1 AT1G52820 25.000 260 166 8 16 260 36 281 4.47e-14 72.0
MS.gene68876.t1 AT4G22870 42.647 68 39 0 184 251 2 69 5.76e-14 67.4
MS.gene68876.t1 AT4G16765 28.261 184 120 7 102 278 59 237 2.79e-13 68.9
MS.gene68876.t1 AT4G16765 28.261 184 120 7 102 278 59 237 2.79e-13 68.9
MS.gene68876.t1 AT4G16765 28.261 184 120 7 102 278 59 237 2.79e-13 68.9
MS.gene68876.t1 AT4G16765 32.773 119 71 4 165 278 77 191 2.13e-12 65.5
MS.gene68876.t1 AT4G16765 28.916 166 108 6 102 260 59 221 2.64e-12 65.9
MS.gene68876.t1 AT3G46480 39.362 94 50 3 163 251 154 245 5.37e-12 65.5
MS.gene68876.t1 AT4G03070 25.862 290 174 13 12 280 35 304 1.21e-11 64.7

Find 85 sgRNAs with CRISPR-Local

Find 127 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAAAGATGCTTGTGAAAAT+TGG 0.134705 8.2:+1390812 MS.gene68876:CDS
CAATCCATTGGCCATCTTTA+AGG 0.155824 8.2:-1391892 None:intergenic
GGATCCAAGGGACCAAATTT+TGG 0.175226 8.2:+1391746 MS.gene68876:CDS
CTAACTTTGGTTCCAAAATT+TGG 0.232333 8.2:-1391758 None:intergenic
AGCTTCAAATCTTGGCTCTT+TGG 0.245143 8.2:-1392346 None:intergenic
AAAAGATGCTTGTGAAAATT+GGG 0.255457 8.2:+1390813 MS.gene68876:CDS
ATTAGTACTATACCTCAATT+TGG 0.306583 8.2:-1391958 None:intergenic
GACTTGCTGTGTGAGAATCT+TGG 0.323307 8.2:+1391689 MS.gene68876:CDS
AACTTTGTCCATCAACTCTA+TGG 0.333621 8.2:-1391220 None:intergenic
GCCTTCATAGCTTCAAATCT+TGG 0.334798 8.2:-1392354 None:intergenic
GGTTCCAAAATTTGGTCCCT+TGG 0.349046 8.2:-1391750 None:intergenic
TGCAGTGGAACTTGAGAAAC+TGG 0.361619 8.2:+1391652 MS.gene68876:CDS
CAAATCTTGGCTCTTTGGCT+TGG 0.362611 8.2:-1392341 None:intergenic
GCTCTTTGGCTTGGAATTTG+AGG 0.371223 8.2:-1392332 None:intergenic
GTCCACCAACCTTGTCATCT+TGG 0.380130 8.2:-1391862 None:intergenic
ACTTGCTGTGTGAGAATCTT+GGG 0.390042 8.2:+1391690 MS.gene68876:CDS
TGAAAATTGGGGTTTCTTTG+AGG 0.399932 8.2:+1390825 MS.gene68876:CDS
CTGAGTCCTTTGATAAGATC+TGG 0.404368 8.2:-1391803 None:intergenic
CAGAAATCAATGACTTGGAT+TGG 0.409232 8.2:+1391331 MS.gene68876:CDS
TATTTGAAGAAAGTCTTTCA+TGG 0.410538 8.2:+1391725 MS.gene68876:CDS
TGGGATATCCATAGAGTTGA+TGG 0.415130 8.2:+1391212 MS.gene68876:CDS
ACATGCTTAGGCAGTTGGTA+TGG 0.424335 8.2:-1392394 None:intergenic
TCATCACATGCTTAGGCAGT+TGG 0.430982 8.2:-1392399 None:intergenic
GGAGCAAAGGTTCAAAGAAA+TGG 0.439953 8.2:+1391278 MS.gene68876:CDS
GGCAGTTGGTATGGGAATGT+TGG 0.451851 8.2:-1392385 None:intergenic
ATCTCTGATATGTTAGAGTT+AGG 0.452914 8.2:-1391381 None:intergenic
CACACTCTTGTATTTGCCAT+TGG 0.461320 8.2:-1392136 None:intergenic
AGAAATCAATGACTTGGATT+GGG 0.472666 8.2:+1391332 MS.gene68876:CDS
AATCTCTCCTGCAGCAGCCT+TGG 0.474285 8.2:+1392236 MS.gene68876:CDS
TATGGGAATGTTGGATTCCA+TGG 0.476603 8.2:-1392376 None:intergenic
TCCTTCACCAAGGCTGCTGC+AGG 0.479391 8.2:-1392243 None:intergenic
CATTCCATTGTTATCAACCT+TGG 0.482440 8.2:+1391932 MS.gene68876:CDS
GAGAATCTTGGGCTAGAGAA+AGG 0.487980 8.2:+1391701 MS.gene68876:CDS
AGGAGGGTAGTTGCTAACTT+TGG 0.492635 8.2:-1391771 None:intergenic
GAGATTACTGCATCATTGCC+TGG 0.493110 8.2:-1392219 None:intergenic
CAACCTTGGTGACCAAATTG+AGG 0.503779 8.2:+1391946 MS.gene68876:CDS
CTCAGAGCCCACACAGATGC+TGG 0.508251 8.2:+1391821 MS.gene68876:CDS
CCTTTGATAAGATCTGGCTT+AGG 0.514259 8.2:-1391797 None:intergenic
GCCAAGATTTGAAGCTATGA+AGG 0.524377 8.2:+1392353 MS.gene68876:CDS
TTAAAACAGGTGATTACCAA+TGG 0.524820 8.2:+1392120 MS.gene68876:intron
AAAGATGCTTGTGAAAATTG+GGG 0.528531 8.2:+1390814 MS.gene68876:CDS
CATGCTTAGGCAGTTGGTAT+GGG 0.532498 8.2:-1392393 None:intergenic
TTGATCTTGATCATGACTAC+AGG 0.534190 8.2:+1391406 MS.gene68876:CDS
TTCCAAGATGACAAGGTTGG+TGG 0.537071 8.2:+1391860 MS.gene68876:CDS
CTATTCCAAGATGACAAGGT+TGG 0.537341 8.2:+1391857 MS.gene68876:CDS
TGTAGTCATGATCAAGATCA+AGG 0.541430 8.2:-1391404 None:intergenic
TCCTGCAGCAGCCTTGGTGA+AGG 0.544976 8.2:+1392242 MS.gene68876:CDS
CTGATATGTTAGAGTTAGGA+AGG 0.547684 8.2:-1391377 None:intergenic
AGCTCCTTAAAGATGGCCAA+TGG 0.550067 8.2:+1391888 MS.gene68876:CDS
ATTTGAAGCTATGAAGGCCA+TGG 0.550162 8.2:+1392359 MS.gene68876:CDS
GAAAGTCTTTCATGGATCCA+AGG 0.558321 8.2:+1391733 MS.gene68876:CDS
TCAGTCAGAAATCAATGACT+TGG 0.558442 8.2:+1391326 MS.gene68876:CDS
GATTACATGAAACTCTATGC+TGG 0.558834 8.2:+1392309 MS.gene68876:CDS
TGGATTATAAAATGATGCTA+TGG 0.559145 8.2:-1392199 None:intergenic
GAATCTTAACACTGAAGAGA+AGG 0.559570 8.2:+1390771 MS.gene68876:CDS
CTTCTGTTTGAGCAATTACA+CGG 0.563408 8.2:-1392164 None:intergenic
GGACTTCAGCTCCTTAAAGA+TGG 0.565268 8.2:+1391881 MS.gene68876:CDS
ATAAGATCTGGCTTAGGACA+AGG 0.565790 8.2:-1391791 None:intergenic
AAAGAAATGGTAGCAAGCAA+AGG 0.566022 8.2:+1391291 MS.gene68876:CDS
GTCACCAAGGTTGATAACAA+TGG 0.568643 8.2:-1391936 None:intergenic
TTGGTGGGACATCAATCCAT+TGG 0.570294 8.2:-1391904 None:intergenic
CGTGTAATTGCTCAAACAGA+AGG 0.571834 8.2:+1392165 MS.gene68876:CDS
ACAATGGAATGACGCATTGG+TGG 0.574276 8.2:-1391920 None:intergenic
AGAATCTTGGGCTAGAGAAA+GGG 0.575627 8.2:+1391702 MS.gene68876:CDS
AGAAAACTACAAGAAGCGTA+TGG 0.577170 8.2:+1391257 MS.gene68876:CDS
ACAAGAAGCGTATGGAGCAA+AGG 0.585634 8.2:+1391265 MS.gene68876:CDS
CAATGGAATGACGCATTGGT+GGG 0.600451 8.2:-1391919 None:intergenic
CCTAAGCCAGATCTTATCAA+AGG 0.602471 8.2:+1391797 MS.gene68876:CDS
AAAGTCTTTCATGGATCCAA+GGG 0.606069 8.2:+1391734 MS.gene68876:CDS
TGATGAAGTTGGTGAACCAT+GGG 0.610190 8.2:+1391193 MS.gene68876:intron
TTGATGAAGTTGGTGAACCA+TGG 0.611805 8.2:+1391192 MS.gene68876:intron
GGCAATGAAGGAATTTGCAG+TGG 0.619899 8.2:+1391637 MS.gene68876:CDS
TGAAGAGAAGGCATCAACCA+TGG 0.624686 8.2:+1390783 MS.gene68876:CDS
ATAACAATGGAATGACGCAT+TGG 0.625745 8.2:-1391923 None:intergenic
GTGTAATTGCTCAAACAGAA+GGG 0.628227 8.2:+1392166 MS.gene68876:CDS
TTTACTATTCCAAGATGACA+AGG 0.632555 8.2:+1391853 MS.gene68876:CDS
CACATCTAATTCCTTCACCA+AGG 0.639481 8.2:-1392253 None:intergenic
TCAACTCTATGGATATCCCA+TGG 0.641514 8.2:-1391209 None:intergenic
TATGCCACCAGCATCTGTGT+GGG 0.645103 8.2:-1391828 None:intergenic
TTATGCCACCAGCATCTGTG+TGG 0.659371 8.2:-1391829 None:intergenic
ATACCTCAATTTGGTCACCA+AGG 0.670046 8.2:-1391949 None:intergenic
AGATCTGGCTTAGGACAAGG+AGG 0.670854 8.2:-1391788 None:intergenic
AGAGCCCACACAGATGCTGG+TGG 0.706268 8.2:+1391824 MS.gene68876:CDS
ATATGTTAGAGTTAGGAAGG+TGG 0.716594 8.2:-1391374 None:intergenic
GATCTGGCTTAGGACAAGGA+GGG 0.742716 8.2:-1391787 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAAAAACATTACTAAT+TGG - chr8.2:1390925-1390944 None:intergenic 10.0%
!!! AGTAATGTTTTTATTATTAT+AGG + chr8.2:1390928-1390947 MS.gene68876:intron 10.0%
!!! TTTTTTGTGTTATTAATTTT+AGG + chr8.2:1391612-1391631 MS.gene68876:intron 10.0%
!! ATATAATACTTTGTTAAAAC+AGG + chr8.2:1392107-1392126 MS.gene68876:intron 15.0%
!!! AATCATCAAAAACAAATTTT+GGG - chr8.2:1392293-1392312 None:intergenic 15.0%
!!! TAATCATCAAAAACAAATTT+TGG - chr8.2:1392294-1392313 None:intergenic 15.0%
!!! TGTATATATTTTTTTGTGTT+TGG + chr8.2:1391581-1391600 MS.gene68876:intron 15.0%
!!! TTTTTTATGAGATTTATTTG+AGG + chr8.2:1390854-1390873 MS.gene68876:intron 15.0%
!! AAATATATACACATAGATCA+TGG - chr8.2:1391572-1391591 None:intergenic 20.0%
!!! AAATCGCATTTTAAAATAAG+AGG - chr8.2:1391464-1391483 None:intergenic 20.0%
!!! GTTTATTTGTTTCTTATTTG+TGG + chr8.2:1391153-1391172 MS.gene68876:intron 20.0%
!!! TTGTGTTATTAATTTTAGGA+AGG + chr8.2:1391616-1391635 MS.gene68876:intron 20.0%
! AAAAGATGCTTGTGAAAATT+GGG + chr8.2:1390813-1390832 MS.gene68876:CDS 25.0%
! ATTAGTACTATACCTCAATT+TGG - chr8.2:1391961-1391980 None:intergenic 25.0%
! CCTCAAAATTCGTAATATTA+CGG + chr8.2:1392033-1392052 MS.gene68876:intron 25.0%
! TAAAAGATGCTTGTGAAAAT+TGG + chr8.2:1390812-1390831 MS.gene68876:CDS 25.0%
! TATTTGAAGAAAGTCTTTCA+TGG + chr8.2:1391725-1391744 MS.gene68876:CDS 25.0%
! TGGATTATAAAATGATGCTA+TGG - chr8.2:1392202-1392221 None:intergenic 25.0%
! TTACGATATGATATCTATTG+TGG + chr8.2:1391526-1391545 MS.gene68876:intron 25.0%
!! ATAGCATCATTTTATAATCC+AGG + chr8.2:1392201-1392220 MS.gene68876:CDS 25.0%
!! TAATCAAAGGGTATAACTAT+AGG + chr8.2:1391977-1391996 MS.gene68876:intron 25.0%
!!! AAACAAATTTTGGGTAAACT+TGG - chr8.2:1392284-1392303 None:intergenic 25.0%
!!! TTGAATGAGTTTTAAGTAGA+AGG - chr8.2:1391004-1391023 None:intergenic 25.0%
AAAGATGCTTGTGAAAATTG+GGG + chr8.2:1390814-1390833 MS.gene68876:CDS 30.0%
ATCTCTGATATGTTAGAGTT+AGG - chr8.2:1391384-1391403 None:intergenic 30.0%
CAACTTCATCAAACAACATA+AGG - chr8.2:1391184-1391203 None:intergenic 30.0%
GAGGTATAGTACTAATCAAA+GGG + chr8.2:1391965-1391984 MS.gene68876:intron 30.0%
GATTTGAACCTTCATATTGT+GGG + chr8.2:1391479-1391498 MS.gene68876:intron 30.0%
GTACTACTAATTAGTATGTC+CGG - chr8.2:1391059-1391078 None:intergenic 30.0%
TGAGGTATAGTACTAATCAA+AGG + chr8.2:1391964-1391983 MS.gene68876:intron 30.0%
TTAAAACAGGTGATTACCAA+TGG + chr8.2:1392120-1392139 MS.gene68876:intron 30.0%
TTTACTATTCCAAGATGACA+AGG + chr8.2:1391853-1391872 MS.gene68876:CDS 30.0%
! AGAAATCAATGACTTGGATT+GGG + chr8.2:1391332-1391351 MS.gene68876:CDS 30.0%
! AGCATCTTTTATAATCTCCA+TGG - chr8.2:1390803-1390822 None:intergenic 30.0%
! CCGTAATATTACGAATTTTG+AGG - chr8.2:1392036-1392055 None:intergenic 30.0%
! CTAACTTTGGTTCCAAAATT+TGG - chr8.2:1391761-1391780 None:intergenic 30.0%
! CTTATGTTGTTTGATGAAGT+TGG + chr8.2:1391182-1391201 MS.gene68876:intron 30.0%
! TACATTTTCCCACAATATGA+AGG - chr8.2:1391490-1391509 None:intergenic 30.0%
!! TAATTTTAGGAAGGCAATGA+AGG + chr8.2:1391625-1391644 MS.gene68876:intron 30.0%
!!! TAGTTGTCATGCTAGTTTTT+GGG + chr8.2:1390965-1390984 MS.gene68876:intron 30.0%
!!! TTAGTTGTCATGCTAGTTTT+TGG + chr8.2:1390964-1390983 MS.gene68876:intron 30.0%
AAAGAAATGGTAGCAAGCAA+AGG + chr8.2:1391291-1391310 MS.gene68876:CDS 35.0%
AAAGTCTTTCATGGATCCAA+GGG + chr8.2:1391734-1391753 MS.gene68876:CDS 35.0%
AACTTTGTCCATCAACTCTA+TGG - chr8.2:1391223-1391242 None:intergenic 35.0%
AATTGGTATGCATATATCCG+TGG - chr8.2:1390908-1390927 None:intergenic 35.0%
AGTACACAACATGAATATGC+AGG - chr8.2:1391117-1391136 None:intergenic 35.0%
ATAACAATGGAATGACGCAT+TGG - chr8.2:1391926-1391945 None:intergenic 35.0%
ATATGTTAGAGTTAGGAAGG+TGG - chr8.2:1391377-1391396 None:intergenic 35.0%
CATTCCATTGTTATCAACCT+TGG + chr8.2:1391932-1391951 MS.gene68876:CDS 35.0%
CGATTTGAACCTTCATATTG+TGG + chr8.2:1391478-1391497 MS.gene68876:intron 35.0%
CTGATATGTTAGAGTTAGGA+AGG - chr8.2:1391380-1391399 None:intergenic 35.0%
CTTCTGTTTGAGCAATTACA+CGG - chr8.2:1392167-1392186 None:intergenic 35.0%
GAATCTTAACACTGAAGAGA+AGG + chr8.2:1390771-1390790 MS.gene68876:CDS 35.0%
GATTACATGAAACTCTATGC+TGG + chr8.2:1392309-1392328 MS.gene68876:CDS 35.0%
GTACACAACATGAATATGCA+GGG - chr8.2:1391116-1391135 None:intergenic 35.0%
GTGTAATTGCTCAAACAGAA+GGG + chr8.2:1392166-1392185 MS.gene68876:CDS 35.0%
TACACAACATGAATATGCAG+GGG - chr8.2:1391115-1391134 None:intergenic 35.0%
TCAGTCAGAAATCAATGACT+TGG + chr8.2:1391326-1391345 MS.gene68876:CDS 35.0%
TGAAAATTGGGGTTTCTTTG+AGG + chr8.2:1390825-1390844 MS.gene68876:CDS 35.0%
TGTAGTCATGATCAAGATCA+AGG - chr8.2:1391407-1391426 None:intergenic 35.0%
TGTTGTGTACTTGTGTTTGA+AGG + chr8.2:1391126-1391145 MS.gene68876:intron 35.0%
TTGATCTTGATCATGACTAC+AGG + chr8.2:1391406-1391425 MS.gene68876:CDS 35.0%
! AGAAAACTACAAGAAGCGTA+TGG + chr8.2:1391257-1391276 MS.gene68876:CDS 35.0%
! CAGAAATCAATGACTTGGAT+TGG + chr8.2:1391331-1391350 MS.gene68876:CDS 35.0%
! GTGGGAAAATGTAGTTGATA+CGG + chr8.2:1391497-1391516 MS.gene68876:intron 35.0%
!!! AGTTTTAAGTAGAAGGTTGC+AGG - chr8.2:1390997-1391016 None:intergenic 35.0%
ATACCTCAATTTGGTCACCA+AGG - chr8.2:1391952-1391971 None:intergenic 40.0%
CAATCCATTGGCCATCTTTA+AGG - chr8.2:1391895-1391914 None:intergenic 40.0%
CACACTCTTGTATTTGCCAT+TGG - chr8.2:1392139-1392158 None:intergenic 40.0%
CACATCTAATTCCTTCACCA+AGG - chr8.2:1392256-1392275 None:intergenic 40.0%
CCTAAGCCAGATCTTATCAA+AGG + chr8.2:1391797-1391816 MS.gene68876:CDS 40.0%
CGTGTAATTGCTCAAACAGA+AGG + chr8.2:1392165-1392184 MS.gene68876:CDS 40.0%
CTATTCCAAGATGACAAGGT+TGG + chr8.2:1391857-1391876 MS.gene68876:CDS 40.0%
CTGAGTCCTTTGATAAGATC+TGG - chr8.2:1391806-1391825 None:intergenic 40.0%
GAAAGTCTTTCATGGATCCA+AGG + chr8.2:1391733-1391752 MS.gene68876:CDS 40.0%
GCCTTCATAGCTTCAAATCT+TGG - chr8.2:1392357-1392376 None:intergenic 40.0%
GGAGCAAAGGTTCAAAGAAA+TGG + chr8.2:1391278-1391297 MS.gene68876:CDS 40.0%
GGTACTCTATGATGCTAAGT+TGG + chr8.2:1390875-1390894 MS.gene68876:intron 40.0%
TATGGGAATGTTGGATTCCA+TGG - chr8.2:1392379-1392398 None:intergenic 40.0%
TCAACTCTATGGATATCCCA+TGG - chr8.2:1391212-1391231 None:intergenic 40.0%
TGGGATATCCATAGAGTTGA+TGG + chr8.2:1391212-1391231 MS.gene68876:CDS 40.0%
! AGAATCTTGGGCTAGAGAAA+GGG + chr8.2:1391702-1391721 MS.gene68876:CDS 40.0%
! AGCTTCAAATCTTGGCTCTT+TGG - chr8.2:1392349-1392368 None:intergenic 40.0%
! AGGGGAAATCAGTCTTTTGA+AGG - chr8.2:1391097-1391116 None:intergenic 40.0%
! ATAAGATCTGGCTTAGGACA+AGG - chr8.2:1391794-1391813 None:intergenic 40.0%
! ATTTGAAGCTATGAAGGCCA+TGG + chr8.2:1392359-1392378 MS.gene68876:CDS 40.0%
! CCTTTGATAAGATCTGGCTT+AGG - chr8.2:1391800-1391819 None:intergenic 40.0%
! GCCAAGATTTGAAGCTATGA+AGG + chr8.2:1392353-1392372 MS.gene68876:CDS 40.0%
!! ACTTGCTGTGTGAGAATCTT+GGG + chr8.2:1391690-1391709 MS.gene68876:CDS 40.0%
!! GTCACCAAGGTTGATAACAA+TGG - chr8.2:1391939-1391958 None:intergenic 40.0%
!! TGATGAAGTTGGTGAACCAT+GGG + chr8.2:1391193-1391212 MS.gene68876:intron 40.0%
!! TTGATGAAGTTGGTGAACCA+TGG + chr8.2:1391192-1391211 MS.gene68876:intron 40.0%
ACAATGGAATGACGCATTGG+TGG - chr8.2:1391923-1391942 None:intergenic 45.0%
AGCTCCTTAAAGATGGCCAA+TGG + chr8.2:1391888-1391907 MS.gene68876:CDS 45.0%
AGGAGGGTAGTTGCTAACTT+TGG - chr8.2:1391774-1391793 None:intergenic 45.0%
CTAATTAGTATGTCCGGCGT+AGG - chr8.2:1391053-1391072 None:intergenic 45.0%
GAGATTACTGCATCATTGCC+TGG - chr8.2:1392222-1392241 None:intergenic 45.0%
GGACTTCAGCTCCTTAAAGA+TGG + chr8.2:1391881-1391900 MS.gene68876:CDS 45.0%
GGCAATGAAGGAATTTGCAG+TGG + chr8.2:1391637-1391656 MS.gene68876:CDS 45.0%
GGTTCCAAAATTTGGTCCCT+TGG - chr8.2:1391753-1391772 None:intergenic 45.0%
TGCAGTGGAACTTGAGAAAC+TGG + chr8.2:1391652-1391671 MS.gene68876:CDS 45.0%
TTCCAAGATGACAAGGTTGG+TGG + chr8.2:1391860-1391879 MS.gene68876:CDS 45.0%
TTGGTGGGACATCAATCCAT+TGG - chr8.2:1391907-1391926 None:intergenic 45.0%
! ACAAGAAGCGTATGGAGCAA+AGG + chr8.2:1391265-1391284 MS.gene68876:CDS 45.0%
! CAAATCTTGGCTCTTTGGCT+TGG - chr8.2:1392344-1392363 None:intergenic 45.0%
! CAACCTTGGTGACCAAATTG+AGG + chr8.2:1391946-1391965 MS.gene68876:CDS 45.0%
! CAATGGAATGACGCATTGGT+GGG - chr8.2:1391922-1391941 None:intergenic 45.0%
! CTATGATGCTAAGTTGGCCA+CGG + chr8.2:1390881-1390900 MS.gene68876:intron 45.0%
! GAGAATCTTGGGCTAGAGAA+AGG + chr8.2:1391701-1391720 MS.gene68876:CDS 45.0%
! GGATCCAAGGGACCAAATTT+TGG + chr8.2:1391746-1391765 MS.gene68876:CDS 45.0%
!! GACTTGCTGTGTGAGAATCT+TGG + chr8.2:1391689-1391708 MS.gene68876:CDS 45.0%
!! GCTCTTTGGCTTGGAATTTG+AGG - chr8.2:1392335-1392354 None:intergenic 45.0%
!! TGAAGAGAAGGCATCAACCA+TGG + chr8.2:1390783-1390802 MS.gene68876:CDS 45.0%
ACTGATCGAACTACCTACGC+CGG + chr8.2:1391037-1391056 MS.gene68876:intron 50.0%
ATGCATATATCCGTGGACCG+TGG - chr8.2:1390901-1390920 None:intergenic 50.0%
GTCCACCAACCTTGTCATCT+TGG - chr8.2:1391865-1391884 None:intergenic 50.0%
TATGCCACCAGCATCTGTGT+GGG - chr8.2:1391831-1391850 None:intergenic 50.0%
TTATGCCACCAGCATCTGTG+TGG - chr8.2:1391832-1391851 None:intergenic 50.0%
! AGATCTGGCTTAGGACAAGG+AGG - chr8.2:1391791-1391810 None:intergenic 50.0%
! GATCTGGCTTAGGACAAGGA+GGG - chr8.2:1391790-1391809 None:intergenic 50.0%
! GGCAGTTGGTATGGGAATGT+TGG - chr8.2:1392388-1392407 None:intergenic 50.0%
AATCTCTCCTGCAGCAGCCT+TGG + chr8.2:1392236-1392255 MS.gene68876:CDS 55.0%
AGAGCCCACACAGATGCTGG+TGG + chr8.2:1391824-1391843 MS.gene68876:CDS 60.0%
CTCAGAGCCCACACAGATGC+TGG + chr8.2:1391821-1391840 MS.gene68876:CDS 60.0%
TCCTGCAGCAGCCTTGGTGA+AGG + chr8.2:1392242-1392261 MS.gene68876:CDS 60.0%
TCCTTCACCAAGGCTGCTGC+AGG - chr8.2:1392246-1392265 None:intergenic 60.0%
! GCTAAGTTGGCCACGGTCCA+CGG + chr8.2:1390888-1390907 MS.gene68876:intron 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 1390766 1392410 1390766 ID=MS.gene68876
chr8.2 mRNA 1390766 1392410 1390766 ID=MS.gene68876.t1;Parent=MS.gene68876
chr8.2 exon 1390766 1390846 1390766 ID=MS.gene68876.t1.exon1;Parent=MS.gene68876.t1
chr8.2 CDS 1390766 1390846 1390766 ID=cds.MS.gene68876.t1;Parent=MS.gene68876.t1
chr8.2 exon 1391201 1391427 1391201 ID=MS.gene68876.t1.exon2;Parent=MS.gene68876.t1
chr8.2 CDS 1391201 1391427 1391201 ID=cds.MS.gene68876.t1;Parent=MS.gene68876.t1
chr8.2 exon 1391634 1391967 1391634 ID=MS.gene68876.t1.exon3;Parent=MS.gene68876.t1
chr8.2 CDS 1391634 1391967 1391634 ID=cds.MS.gene68876.t1;Parent=MS.gene68876.t1
chr8.2 exon 1392129 1392410 1392129 ID=MS.gene68876.t1.exon4;Parent=MS.gene68876.t1
chr8.2 CDS 1392129 1392410 1392129 ID=cds.MS.gene68876.t1;Parent=MS.gene68876.t1
Gene Sequence

>MS.gene68876

ATGAAGAATCTTAACACTGAAGAGAAGGCATCAACCATGGAGATTATAAAAGATGCTTGTGAAAATTGGGGTTTCTTTGAGGTACATTTTTTTTATGAGATTTATTTGAGGTACTCTATGATGCTAAGTTGGCCACGGTCCACGGATATATGCATACCAATTAGTAATGTTTTTATTATTATAGGCAAATGCTAGTAATTAGTTGTCATGCTAGTTTTTGGGATCGAACCTGCAACCTTCTACTTAAAACTCATTCAATATCGCTTAGCTCACTGATCGAACTACCTACGCCGGACATACTAATTAGTAGTACTTAACTGACAACTCTCCTTCAAAAGACTGATTTCCCCTGCATATTCATGTTGTGTACTTGTGTTTGAAGGCTTTGTTTATTTGTTTCTTATTTGTGGATTTTCCTTATGTTGTTTGATGAAGTTGGTGAACCATGGGATATCCATAGAGTTGATGGACAAAGTTGAGAAGCTGACAAAAGAAAACTACAAGAAGCGTATGGAGCAAAGGTTCAAAGAAATGGTAGCAAGCAAAGGTTTAGAGTTTGCTCAGTCAGAAATCAATGACTTGGATTGGGAAAGCACTTTCTTTTTGCGCCACCTTCCTAACTCTAACATATCAGAGATCCTTGATCTTGATCATGACTACAGGTTAATATTTATTCTCAACATAAATCATGCACACCTCTTATTTTAAAATGCGATTTGAACCTTCATATTGTGGGAAAATGTAGTTGATACGGTCGAAATTACGATATGATATCTATTGTGGTTGCATAATGCAATTTTAAACCATGATCTATGTGTATATATTTTTTTGTGTTTGGTCACATAATTTTTTGTGTTATTAATTTTAGGAAGGCAATGAAGGAATTTGCAGTGGAACTTGAGAAACTGGCTGAGCTACTTCTTGACTTGCTGTGTGAGAATCTTGGGCTAGAGAAAGGGTATTTGAAGAAAGTCTTTCATGGATCCAAGGGACCAAATTTTGGAACCAAAGTTAGCAACTACCCTCCTTGTCCTAAGCCAGATCTTATCAAAGGACTCAGAGCCCACACAGATGCTGGTGGCATAATTTTACTATTCCAAGATGACAAGGTTGGTGGACTTCAGCTCCTTAAAGATGGCCAATGGATTGATGTCCCACCAATGCGTCATTCCATTGTTATCAACCTTGGTGACCAAATTGAGGTATAGTACTAATCAAAGGGTATAACTATAGGTTTGAAATCGTGTTTGCGATGTTGTTGTAGAGACCTCAAAATTCGTAATATTACGGCTGCAATATAAAACTGTCTGCTAGTTTATGCATCATTAATTTTCTTCATTAATATAATACTTTGTTAAAACAGGTGATTACCAATGGCAAATACAAGAGTGTGTTGCACCGTGTAATTGCTCAAACAGAAGGGAACAGAATGTCCATAGCATCATTTTATAATCCAGGCAATGATGCAGTAATCTCTCCTGCAGCAGCCTTGGTGAAGGAATTAGATGTGACAAACCAAGTTTACCCAAAATTTGTTTTTGATGATTACATGAAACTCTATGCTGGCCTCAAATTCCAAGCCAAAGAGCCAAGATTTGAAGCTATGAAGGCCATGGAATCCAACATTCCCATACCAACTGCCTAA

Protein sequence

>MS.gene68876.t1

MKNLNTEEKASTMEIIKDACENWGFFELVNHGISIELMDKVEKLTKENYKKRMEQRFKEMVASKGLEFAQSEINDLDWESTFFLRHLPNSNISEILDLDHDYRKAMKEFAVELEKLAELLLDLLCENLGLEKGYLKKVFHGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVGGLQLLKDGQWIDVPPMRHSIVINLGDQIEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGNDAVISPAAALVKELDVTNQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMESNIPIPTA