Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87466.t1 | XP_013446399.1 | 99.7 | 327 | 1 | 0 | 1 | 327 | 48 | 374 | 5.80E-187 | 663.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87466.t1 | Q9FFZ1 | 27.5 | 324 | 194 | 5 | 34 | 318 | 93 | 414 | 1.5e-29 | 131.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87466.t1 | A0A072TTE3 | 99.7 | 327 | 1 | 0 | 1 | 327 | 48 | 374 | 4.2e-187 | 663.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene87466 | 0.847061 | 1.47E-59 | -1.69E-46 |
MS.gene049171 | MS.gene87466 | 0.91504 | 9.44E-85 | -1.69E-46 |
MS.gene049173 | MS.gene87466 | 0.824811 | 6.59E-54 | -1.69E-46 |
MS.gene049217 | MS.gene87466 | 0.832467 | 9.30E-56 | -1.69E-46 |
MS.gene049222 | MS.gene87466 | 0.880462 | 5.38E-70 | -1.69E-46 |
MS.gene049232 | MS.gene87466 | 0.814035 | 1.89E-51 | -1.69E-46 |
MS.gene049257 | MS.gene87466 | 0.826072 | 3.32E-54 | -1.69E-46 |
MS.gene049285 | MS.gene87466 | 0.878611 | 2.44E-69 | -1.69E-46 |
MS.gene049320 | MS.gene87466 | 0.843437 | 1.40E-58 | -1.69E-46 |
MS.gene049427 | MS.gene87466 | 0.813821 | 2.11E-51 | -1.69E-46 |
MS.gene049609 | MS.gene87466 | 0.875262 | 3.54E-68 | -1.69E-46 |
MS.gene049633 | MS.gene87466 | 0.90339 | 3.65E-79 | -1.69E-46 |
MS.gene049805 | MS.gene87466 | 0.864455 | 1.20E-64 | -1.69E-46 |
MS.gene049865 | MS.gene87466 | 0.812393 | 4.34E-51 | -1.69E-46 |
MS.gene05010 | MS.gene87466 | 0.812473 | 4.16E-51 | -1.69E-46 |
MS.gene050163 | MS.gene87466 | 0.843499 | 1.35E-58 | -1.69E-46 |
MS.gene050165 | MS.gene87466 | 0.83674 | 7.84E-57 | -1.69E-46 |
MS.gene050170 | MS.gene87466 | 0.88319 | 5.53E-71 | -1.69E-46 |
MS.gene050323 | MS.gene87466 | 0.861783 | 8.05E-64 | -1.69E-46 |
MS.gene050333 | MS.gene87466 | 0.808964 | 2.39E-50 | -1.69E-46 |
MS.gene050338 | MS.gene87466 | -0.819112 | 1.38E-52 | -1.69E-46 |
MS.gene050444 | MS.gene87466 | 0.856038 | 4.21E-62 | -1.69E-46 |
MS.gene050496 | MS.gene87466 | 0.838839 | 2.27E-57 | -1.69E-46 |
MS.gene050504 | MS.gene87466 | 0.868671 | 5.49E-66 | -1.69E-46 |
MS.gene050518 | MS.gene87466 | 0.83897 | 2.10E-57 | -1.69E-46 |
MS.gene050538 | MS.gene87466 | 0.839737 | 1.32E-57 | -1.69E-46 |
MS.gene050577 | MS.gene87466 | 0.882476 | 1.01E-70 | -1.69E-46 |
MS.gene050593 | MS.gene87466 | 0.855466 | 6.19E-62 | -1.69E-46 |
MS.gene050612 | MS.gene87466 | 0.860263 | 2.33E-63 | -1.69E-46 |
MS.gene050675 | MS.gene87466 | 0.842193 | 3.00E-58 | -1.69E-46 |
MS.gene050699 | MS.gene87466 | 0.863945 | 1.73E-64 | -1.69E-46 |
MS.gene050747 | MS.gene87466 | 0.884362 | 2.05E-71 | -1.69E-46 |
MS.gene050772 | MS.gene87466 | 0.869033 | 4.19E-66 | -1.69E-46 |
MS.gene05080 | MS.gene87466 | 0.872396 | 3.29E-67 | -1.69E-46 |
MS.gene05081 | MS.gene87466 | 0.886673 | 2.79E-72 | -1.69E-46 |
MS.gene050868 | MS.gene87466 | 0.876549 | 1.28E-68 | -1.69E-46 |
MS.gene050871 | MS.gene87466 | 0.873179 | 1.80E-67 | -1.69E-46 |
MS.gene050904 | MS.gene87466 | 0.846861 | 1.66E-59 | -1.69E-46 |
MS.gene050950 | MS.gene87466 | 0.885189 | 1.01E-71 | -1.69E-46 |
MS.gene050986 | MS.gene87466 | 0.837948 | 3.84E-57 | -1.69E-46 |
MS.gene05100 | MS.gene87466 | 0.807384 | 5.19E-50 | -1.69E-46 |
MS.gene051268 | MS.gene87466 | 0.802591 | 5.22E-49 | -1.69E-46 |
MS.gene051317 | MS.gene87466 | 0.865581 | 5.32E-65 | -1.69E-46 |
MS.gene051551 | MS.gene87466 | 0.824182 | 9.27E-54 | -1.69E-46 |
MS.gene051552 | MS.gene87466 | -0.800659 | 1.30E-48 | -1.69E-46 |
MS.gene051617 | MS.gene87466 | 0.834065 | 3.72E-56 | -1.69E-46 |
MS.gene051651 | MS.gene87466 | -0.811205 | 7.87E-51 | -1.69E-46 |
MS.gene051666 | MS.gene87466 | 0.862709 | 4.18E-64 | -1.69E-46 |
MS.gene051694 | MS.gene87466 | 0.814808 | 1.28E-51 | -1.69E-46 |
MS.gene051734 | MS.gene87466 | 0.836031 | 1.19E-56 | -1.69E-46 |
MS.gene051810 | MS.gene87466 | 0.836583 | 8.60E-57 | -1.69E-46 |
MS.gene051838 | MS.gene87466 | 0.917679 | 3.95E-86 | -1.69E-46 |
MS.gene051858 | MS.gene87466 | 0.840725 | 7.31E-58 | -1.69E-46 |
MS.gene051874 | MS.gene87466 | 0.816248 | 6.10E-52 | -1.69E-46 |
MS.gene051941 | MS.gene87466 | 0.812941 | 3.29E-51 | -1.69E-46 |
MS.gene051949 | MS.gene87466 | 0.816026 | 6.84E-52 | -1.69E-46 |
MS.gene052129 | MS.gene87466 | -0.821277 | 4.40E-53 | -1.69E-46 |
MS.gene052164 | MS.gene87466 | 0.865545 | 5.46E-65 | -1.69E-46 |
MS.gene052346 | MS.gene87466 | 0.805851 | 1.09E-49 | -1.69E-46 |
MS.gene052379 | MS.gene87466 | 0.822152 | 2.76E-53 | -1.69E-46 |
MS.gene05240 | MS.gene87466 | -0.802158 | 6.41E-49 | -1.69E-46 |
MS.gene052414 | MS.gene87466 | 0.804279 | 2.33E-49 | -1.69E-46 |
MS.gene052421 | MS.gene87466 | 0.816229 | 6.16E-52 | -1.69E-46 |
MS.gene052481 | MS.gene87466 | 0.814099 | 1.83E-51 | -1.69E-46 |
MS.gene052482 | MS.gene87466 | 0.818289 | 2.12E-52 | -1.69E-46 |
MS.gene052484 | MS.gene87466 | 0.806541 | 7.82E-50 | -1.69E-46 |
MS.gene052486 | MS.gene87466 | 0.828734 | 7.63E-55 | -1.69E-46 |
MS.gene052501 | MS.gene87466 | 0.857367 | 1.71E-62 | -1.69E-46 |
MS.gene052503 | MS.gene87466 | 0.883049 | 6.23E-71 | -1.69E-46 |
MS.gene052505 | MS.gene87466 | 0.847436 | 1.16E-59 | -1.69E-46 |
MS.gene052506 | MS.gene87466 | 0.85084 | 1.31E-60 | -1.69E-46 |
MS.gene052615 | MS.gene87466 | 0.872317 | 3.49E-67 | -1.69E-46 |
MS.gene052820 | MS.gene87466 | 0.821997 | 3.00E-53 | -1.69E-46 |
MS.gene052822 | MS.gene87466 | 0.849687 | 2.76E-60 | -1.69E-46 |
MS.gene052823 | MS.gene87466 | 0.878785 | 2.12E-69 | -1.69E-46 |
MS.gene052825 | MS.gene87466 | 0.881368 | 2.54E-70 | -1.69E-46 |
MS.gene052870 | MS.gene87466 | 0.884206 | 2.34E-71 | -1.69E-46 |
MS.gene052872 | MS.gene87466 | 0.893023 | 9.24E-75 | -1.69E-46 |
MS.gene052966 | MS.gene87466 | 0.851276 | 9.86E-61 | -1.69E-46 |
MS.gene052982 | MS.gene87466 | 0.803942 | 2.74E-49 | -1.69E-46 |
MS.gene053203 | MS.gene87466 | 0.899869 | 1.29E-77 | -1.69E-46 |
MS.gene053207 | MS.gene87466 | 0.851316 | 9.61E-61 | -1.69E-46 |
MS.gene053213 | MS.gene87466 | 0.845947 | 2.96E-59 | -1.69E-46 |
MS.gene053284 | MS.gene87466 | 0.800896 | 1.16E-48 | -1.69E-46 |
MS.gene053286 | MS.gene87466 | 0.841496 | 4.59E-58 | -1.69E-46 |
MS.gene053436 | MS.gene87466 | 0.812551 | 4.00E-51 | -1.69E-46 |
MS.gene053479 | MS.gene87466 | 0.853719 | 1.98E-61 | -1.69E-46 |
MS.gene053480 | MS.gene87466 | 0.872179 | 3.88E-67 | -1.69E-46 |
MS.gene053574 | MS.gene87466 | 0.855278 | 7.02E-62 | -1.69E-46 |
MS.gene053579 | MS.gene87466 | 0.813738 | 2.20E-51 | -1.69E-46 |
MS.gene053632 | MS.gene87466 | 0.852825 | 3.58E-61 | -1.69E-46 |
MS.gene053824 | MS.gene87466 | 0.904372 | 1.31E-79 | -1.69E-46 |
MS.gene053916 | MS.gene87466 | 0.821818 | 3.30E-53 | -1.69E-46 |
MS.gene054107 | MS.gene87466 | 0.813521 | 2.45E-51 | -1.69E-46 |
MS.gene054343 | MS.gene87466 | 0.851615 | 7.91E-61 | -1.69E-46 |
MS.gene054344 | MS.gene87466 | 0.878399 | 2.90E-69 | -1.69E-46 |
MS.gene054408 | MS.gene87466 | 0.86066 | 1.77E-63 | -1.69E-46 |
MS.gene054595 | MS.gene87466 | 0.83834 | 3.05E-57 | -1.69E-46 |
MS.gene054600 | MS.gene87466 | 0.861277 | 1.15E-63 | -1.69E-46 |
MS.gene054642 | MS.gene87466 | 0.858221 | 9.56E-63 | -1.69E-46 |
MS.gene054706 | MS.gene87466 | -0.825296 | 5.07E-54 | -1.69E-46 |
MS.gene05470 | MS.gene87466 | 0.904479 | 1.18E-79 | -1.69E-46 |
MS.gene054884 | MS.gene87466 | -0.89274 | 1.20E-74 | -1.69E-46 |
MS.gene054927 | MS.gene87466 | 0.838416 | 2.91E-57 | -1.69E-46 |
MS.gene05494 | MS.gene87466 | 0.831296 | 1.81E-55 | -1.69E-46 |
MS.gene054954 | MS.gene87466 | 0.864093 | 1.56E-64 | -1.69E-46 |
MS.gene05505 | MS.gene87466 | 0.827191 | 1.79E-54 | -1.69E-46 |
MS.gene055206 | MS.gene87466 | 0.887697 | 1.14E-72 | -1.69E-46 |
MS.gene055224 | MS.gene87466 | 0.844069 | 9.50E-59 | -1.69E-46 |
MS.gene055289 | MS.gene87466 | 0.8405 | 8.38E-58 | -1.69E-46 |
MS.gene055362 | MS.gene87466 | 0.859688 | 3.48E-63 | -1.69E-46 |
MS.gene055370 | MS.gene87466 | 0.80871 | 2.71E-50 | -1.69E-46 |
MS.gene055502 | MS.gene87466 | 0.884811 | 1.39E-71 | -1.69E-46 |
MS.gene055536 | MS.gene87466 | -0.805916 | 1.06E-49 | -1.69E-46 |
MS.gene055539 | MS.gene87466 | 0.809362 | 1.96E-50 | -1.69E-46 |
MS.gene055577 | MS.gene87466 | 0.900941 | 4.42E-78 | -1.69E-46 |
MS.gene055616 | MS.gene87466 | -0.800527 | 1.38E-48 | -1.69E-46 |
MS.gene055722 | MS.gene87466 | 0.850384 | 1.76E-60 | -1.69E-46 |
MS.gene055741 | MS.gene87466 | 0.80401 | 2.65E-49 | -1.69E-46 |
MS.gene055748 | MS.gene87466 | 0.866767 | 2.24E-65 | -1.69E-46 |
MS.gene055750 | MS.gene87466 | 0.836291 | 1.02E-56 | -1.69E-46 |
MS.gene055751 | MS.gene87466 | 0.859977 | 2.85E-63 | -1.69E-46 |
MS.gene05589 | MS.gene87466 | 0.8943 | 2.81E-75 | -1.69E-46 |
MS.gene055941 | MS.gene87466 | 0.867809 | 1.04E-65 | -1.69E-46 |
MS.gene056083 | MS.gene87466 | 0.831878 | 1.30E-55 | -1.69E-46 |
MS.gene056166 | MS.gene87466 | 0.84134 | 5.04E-58 | -1.69E-46 |
MS.gene056266 | MS.gene87466 | 0.800073 | 1.71E-48 | -1.69E-46 |
MS.gene056374 | MS.gene87466 | 0.824582 | 7.47E-54 | -1.69E-46 |
MS.gene056387 | MS.gene87466 | 0.836033 | 1.19E-56 | -1.69E-46 |
MS.gene056409 | MS.gene87466 | 0.805877 | 1.08E-49 | -1.69E-46 |
MS.gene056504 | MS.gene87466 | 0.870096 | 1.89E-66 | -1.69E-46 |
MS.gene056510 | MS.gene87466 | 0.871231 | 8.00E-67 | -1.69E-46 |
MS.gene056549 | MS.gene87466 | 0.803544 | 3.31E-49 | -1.69E-46 |
MS.gene056590 | MS.gene87466 | -0.819243 | 1.29E-52 | -1.69E-46 |
MS.gene056591 | MS.gene87466 | -0.821088 | 4.86E-53 | -1.69E-46 |
MS.gene056610 | MS.gene87466 | 0.836897 | 7.15E-57 | -1.69E-46 |
MS.gene056657 | MS.gene87466 | 0.846475 | 2.12E-59 | -1.69E-46 |
MS.gene056692 | MS.gene87466 | 0.865091 | 7.59E-65 | -1.69E-46 |
MS.gene056694 | MS.gene87466 | -0.834516 | 2.87E-56 | -1.69E-46 |
MS.gene056697 | MS.gene87466 | -0.824337 | 8.52E-54 | -1.69E-46 |
MS.gene056856 | MS.gene87466 | -0.808834 | 2.55E-50 | -1.69E-46 |
MS.gene056877 | MS.gene87466 | 0.853796 | 1.89E-61 | -1.69E-46 |
MS.gene056897 | MS.gene87466 | 0.8284 | 9.18E-55 | -1.69E-46 |
MS.gene056898 | MS.gene87466 | 0.821209 | 4.56E-53 | -1.69E-46 |
MS.gene056946 | MS.gene87466 | 0.833361 | 5.58E-56 | -1.69E-46 |
MS.gene057048 | MS.gene87466 | 0.827479 | 1.53E-54 | -1.69E-46 |
MS.gene057076 | MS.gene87466 | 0.857048 | 2.13E-62 | -1.69E-46 |
MS.gene057086 | MS.gene87466 | 0.801857 | 7.39E-49 | -1.69E-46 |
MS.gene057124 | MS.gene87466 | 0.807763 | 4.31E-50 | -1.69E-46 |
MS.gene057196 | MS.gene87466 | 0.847781 | 9.31E-60 | -1.69E-46 |
MS.gene057331 | MS.gene87466 | 0.829013 | 6.53E-55 | -1.69E-46 |
MS.gene057332 | MS.gene87466 | 0.866476 | 2.77E-65 | -1.69E-46 |
MS.gene057416 | MS.gene87466 | 0.857877 | 1.21E-62 | -1.69E-46 |
MS.gene057658 | MS.gene87466 | 0.903913 | 2.12E-79 | -1.69E-46 |
MS.gene057734 | MS.gene87466 | 0.813655 | 2.29E-51 | -1.69E-46 |
MS.gene057831 | MS.gene87466 | 0.855728 | 5.19E-62 | -1.69E-46 |
MS.gene057856 | MS.gene87466 | 0.872608 | 2.79E-67 | -1.69E-46 |
MS.gene057857 | MS.gene87466 | 0.855157 | 7.62E-62 | -1.69E-46 |
MS.gene05787 | MS.gene87466 | 0.810089 | 1.37E-50 | -1.69E-46 |
MS.gene058019 | MS.gene87466 | 0.803612 | 3.21E-49 | -1.69E-46 |
MS.gene058130 | MS.gene87466 | 0.822244 | 2.63E-53 | -1.69E-46 |
MS.gene058334 | MS.gene87466 | -0.848926 | 4.49E-60 | -1.69E-46 |
MS.gene058338 | MS.gene87466 | 0.875114 | 3.97E-68 | -1.69E-46 |
MS.gene05837 | MS.gene87466 | 0.873521 | 1.38E-67 | -1.69E-46 |
MS.gene058418 | MS.gene87466 | -0.828247 | 1.00E-54 | -1.69E-46 |
MS.gene058419 | MS.gene87466 | 0.885579 | 7.20E-72 | -1.69E-46 |
MS.gene058444 | MS.gene87466 | 0.849642 | 2.84E-60 | -1.69E-46 |
MS.gene058544 | MS.gene87466 | 0.889064 | 3.38E-73 | -1.69E-46 |
MS.gene058723 | MS.gene87466 | 0.833352 | 5.60E-56 | -1.69E-46 |
MS.gene058773 | MS.gene87466 | 0.848758 | 5.00E-60 | -1.69E-46 |
MS.gene058838 | MS.gene87466 | 0.916344 | 1.99E-85 | -1.69E-46 |
MS.gene05883 | MS.gene87466 | 0.839852 | 1.24E-57 | -1.69E-46 |
MS.gene059022 | MS.gene87466 | 0.861408 | 1.05E-63 | -1.69E-46 |
MS.gene059023 | MS.gene87466 | 0.932159 | 1.29E-94 | -1.69E-46 |
MS.gene05912 | MS.gene87466 | 0.831165 | 1.95E-55 | -1.69E-46 |
MS.gene05913 | MS.gene87466 | 0.821243 | 4.48E-53 | -1.69E-46 |
MS.gene05914 | MS.gene87466 | 0.892397 | 1.65E-74 | -1.69E-46 |
MS.gene05926 | MS.gene87466 | -0.812235 | 4.70E-51 | -1.69E-46 |
MS.gene059303 | MS.gene87466 | 0.819874 | 9.24E-53 | -1.69E-46 |
MS.gene05934 | MS.gene87466 | 0.859893 | 3.02E-63 | -1.69E-46 |
MS.gene059512 | MS.gene87466 | 0.802999 | 4.30E-49 | -1.69E-46 |
MS.gene059526 | MS.gene87466 | -0.809979 | 1.45E-50 | -1.69E-46 |
MS.gene05960 | MS.gene87466 | -0.81241 | 4.30E-51 | -1.69E-46 |
MS.gene059667 | MS.gene87466 | 0.827715 | 1.34E-54 | -1.69E-46 |
MS.gene059677 | MS.gene87466 | 0.879316 | 1.38E-69 | -1.69E-46 |
MS.gene059699 | MS.gene87466 | -0.806322 | 8.70E-50 | -1.69E-46 |
MS.gene059703 | MS.gene87466 | -0.812932 | 3.31E-51 | -1.69E-46 |
MS.gene059718 | MS.gene87466 | 0.872444 | 3.17E-67 | -1.69E-46 |
MS.gene059756 | MS.gene87466 | 0.869296 | 3.44E-66 | -1.69E-46 |
MS.gene059801 | MS.gene87466 | 0.820219 | 7.70E-53 | -1.69E-46 |
MS.gene059865 | MS.gene87466 | 0.863853 | 1.85E-64 | -1.69E-46 |
MS.gene059902 | MS.gene87466 | 0.835114 | 2.03E-56 | -1.69E-46 |
MS.gene06000 | MS.gene87466 | 0.858273 | 9.22E-63 | -1.69E-46 |
MS.gene06027 | MS.gene87466 | 0.841716 | 4.01E-58 | -1.69E-46 |
MS.gene060405 | MS.gene87466 | -0.801841 | 7.44E-49 | -1.69E-46 |
MS.gene060703 | MS.gene87466 | 0.833677 | 4.65E-56 | -1.69E-46 |
MS.gene060762 | MS.gene87466 | 0.900285 | 8.54E-78 | -1.69E-46 |
MS.gene060778 | MS.gene87466 | 0.819071 | 1.41E-52 | -1.69E-46 |
MS.gene06077 | MS.gene87466 | 0.869078 | 4.05E-66 | -1.69E-46 |
MS.gene060835 | MS.gene87466 | 0.836491 | 9.07E-57 | -1.69E-46 |
MS.gene06092 | MS.gene87466 | 0.881639 | 2.03E-70 | -1.69E-46 |
MS.gene060982 | MS.gene87466 | 0.888888 | 3.96E-73 | -1.69E-46 |
MS.gene061044 | MS.gene87466 | -0.826511 | 2.61E-54 | -1.69E-46 |
MS.gene061150 | MS.gene87466 | 0.890295 | 1.12E-73 | -1.69E-46 |
MS.gene061231 | MS.gene87466 | 0.846125 | 2.64E-59 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene012239 | MS.gene87466 | PPI |
MS.gene051828 | MS.gene87466 | PPI |
MS.gene87466 | MS.gene90280 | PPI |
MS.gene062219 | MS.gene87466 | PPI |
MS.gene87466 | MS.gene004921 | PPI |
MS.gene24845 | MS.gene87466 | PPI |
MS.gene87466 | MS.gene051793 | PPI |
MS.gene87466 | MS.gene07438 | PPI |
MS.gene87466 | MS.gene07443 | PPI |
MS.gene87466 | MS.gene90176 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87466.t1 | MTR_8g077185 | 99.694 | 327 | 1 | 0 | 1 | 327 | 48 | 374 | 0.0 | 674 |
MS.gene87466.t1 | MTR_1g076920 | 35.988 | 339 | 179 | 12 | 5 | 318 | 65 | 390 | 3.68e-52 | 177 |
MS.gene87466.t1 | MTR_5g056200 | 34.314 | 306 | 167 | 8 | 37 | 322 | 59 | 350 | 1.51e-49 | 169 |
MS.gene87466.t1 | MTR_4g036495 | 33.216 | 283 | 172 | 8 | 37 | 315 | 404 | 673 | 1.34e-39 | 148 |
MS.gene87466.t1 | MTR_3g034670 | 28.804 | 368 | 203 | 12 | 4 | 324 | 101 | 456 | 7.44e-32 | 124 |
MS.gene87466.t1 | MTR_5g044540 | 25.874 | 286 | 175 | 8 | 47 | 323 | 8 | 265 | 4.78e-19 | 85.9 |
MS.gene87466.t1 | MTR_5g044540 | 25.874 | 286 | 175 | 8 | 47 | 323 | 24 | 281 | 6.65e-19 | 85.9 |
MS.gene87466.t1 | MTR_5g044540 | 25.874 | 286 | 175 | 8 | 47 | 323 | 25 | 282 | 6.68e-19 | 85.9 |
MS.gene87466.t1 | MTR_5g044540 | 25.874 | 286 | 175 | 8 | 47 | 323 | 87 | 344 | 1.23e-18 | 85.9 |
MS.gene87466.t1 | MTR_4g083080 | 26.766 | 269 | 162 | 8 | 47 | 307 | 68 | 309 | 1.27e-15 | 77.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87466.t1 | AT4G36530 | 74.684 | 316 | 77 | 1 | 1 | 316 | 51 | 363 | 0.0 | 512 |
MS.gene87466.t1 | AT4G36530 | 75.658 | 304 | 74 | 0 | 13 | 316 | 3 | 306 | 0.0 | 504 |
MS.gene87466.t1 | AT5G19850 | 34.557 | 327 | 175 | 10 | 5 | 316 | 55 | 357 | 1.06e-54 | 182 |
MS.gene87466.t1 | AT5G38520 | 35.714 | 308 | 171 | 11 | 31 | 319 | 61 | 360 | 6.63e-46 | 159 |
MS.gene87466.t1 | AT5G38520 | 34.688 | 320 | 170 | 11 | 31 | 319 | 61 | 372 | 2.46e-45 | 158 |
MS.gene87466.t1 | AT4G25290 | 34.667 | 300 | 175 | 9 | 25 | 319 | 388 | 671 | 2.06e-41 | 153 |
MS.gene87466.t1 | AT5G13800 | 29.573 | 328 | 182 | 9 | 34 | 318 | 93 | 414 | 3.19e-35 | 134 |
MS.gene87466.t1 | AT5G13800 | 29.573 | 328 | 182 | 9 | 34 | 318 | 93 | 414 | 3.19e-35 | 134 |
MS.gene87466.t1 | AT5G13800 | 29.573 | 328 | 182 | 9 | 34 | 318 | 116 | 437 | 3.45e-35 | 134 |
MS.gene87466.t1 | AT5G13800 | 29.430 | 316 | 174 | 9 | 34 | 306 | 93 | 402 | 3.35e-33 | 127 |
MS.gene87466.t1 | AT1G13820 | 24.823 | 282 | 167 | 8 | 47 | 315 | 77 | 326 | 2.55e-15 | 76.3 |
MS.gene87466.t1 | AT4G12830 | 27.407 | 270 | 157 | 12 | 51 | 305 | 132 | 377 | 3.67e-13 | 70.1 |
Find 88 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTGTTTCTTAGCTAATTC+TGG | 0.193349 | 8.3:-26917612 | None:intergenic |
CCTCCTCTTGTTCTTATTCA+TGG | 0.200309 | 8.3:+26916504 | MS.gene87466:CDS |
GCCTTAGACTTGCTAGGATT+TGG | 0.209818 | 8.3:+26917642 | MS.gene87466:CDS |
GCTTGTGAACTCGGCTTTAT+TGG | 0.243772 | 8.3:+26919631 | MS.gene87466:CDS |
CTGAATTCTGCAGGACAATT+TGG | 0.243796 | 8.3:+26918211 | MS.gene87466:CDS |
AAGCAGAAGGGTACAATTAT+TGG | 0.274374 | 8.3:+26916436 | MS.gene87466:CDS |
CTTGTTCTTATTCATGGTTT+TGG | 0.276536 | 8.3:+26916510 | MS.gene87466:CDS |
CCTTAGACTTGCTAGGATTT+GGG | 0.283802 | 8.3:+26917643 | MS.gene87466:CDS |
ACAATTTGGCGATGGAAATA+AGG | 0.316222 | 8.3:+26918225 | MS.gene87466:CDS |
GGGTTGCCTGAGTCTGTCAC+TGG | 0.327550 | 8.3:+26918178 | MS.gene87466:CDS |
ACTGCTTTGATTGCGGCAGC+TGG | 0.338318 | 8.3:+26918157 | MS.gene87466:CDS |
TGTTAAAGAACCAGCAGTTT+TGG | 0.341015 | 8.3:+26917740 | MS.gene87466:CDS |
TATACAATGTTCAAACTGTT+TGG | 0.342917 | 8.3:-26919688 | None:intergenic |
TTTAAAGGAATTATGGCAAC+TGG | 0.352076 | 8.3:+26915818 | None:intergenic |
TAGTTCTTGGATTTATATTC+TGG | 0.352366 | 8.3:+26918320 | MS.gene87466:CDS |
CCGGCATTGGGGTCTTGAGC+TGG | 0.357932 | 8.3:-26918920 | None:intergenic |
TAATAAACTTCTCCGGCATT+GGG | 0.368100 | 8.3:-26918932 | None:intergenic |
CCCAAATCCTAGCAAGTCTA+AGG | 0.369615 | 8.3:-26917643 | None:intergenic |
ATGCCGGAGAAGTTTATTAC+AGG | 0.380848 | 8.3:+26918936 | MS.gene87466:CDS |
TTGTACCCTTCTGCTTTGTA+TGG | 0.388649 | 8.3:-26916429 | None:intergenic |
GTAATAAACTTCTCCGGCAT+TGG | 0.392291 | 8.3:-26918933 | None:intergenic |
TGAACTCGGCTTTATTGGAT+TGG | 0.414109 | 8.3:+26919636 | MS.gene87466:CDS |
CACCCCACAGCAGAAGCAAC+GGG | 0.433977 | 8.3:-26919496 | None:intergenic |
TTGCCCGTTGCTTCTGCTGT+GGG | 0.436398 | 8.3:+26919493 | MS.gene87466:CDS |
ACTGTTTGGAGAGAGACTTT+AGG | 0.439212 | 8.3:-26919674 | None:intergenic |
CTCGTCGTGTGGGCAATGCC+CGG | 0.447825 | 8.3:-26919600 | None:intergenic |
CTCTTGTTAACTTGCAAGCC+GGG | 0.448412 | 8.3:+26919582 | MS.gene87466:CDS |
CGCTGGAAAACTTCCTTCAA+AGG | 0.459653 | 8.3:-26918295 | None:intergenic |
TTGGTGCATCTGCATTCCAC+TGG | 0.460716 | 8.3:+26916529 | MS.gene87466:CDS |
GGTTGCCTGAGTCTGTCACT+GGG | 0.462012 | 8.3:+26918179 | MS.gene87466:CDS |
TGTGGGGTGACCTTGATCCA+TGG | 0.464954 | 8.3:+26919510 | MS.gene87466:CDS |
GGCAACTGGAGTTTCAGTTA+TGG | 0.466052 | 8.3:+26915832 | MS.gene87466:CDS |
TTGAGCTTGTGAAGTAAGAG+AGG | 0.474929 | 8.3:-26915858 | None:intergenic |
CTTGCCCGTTGCTTCTGCTG+TGG | 0.479737 | 8.3:+26919492 | MS.gene87466:CDS |
GATACCTGAGCTTGTGAACT+CGG | 0.479954 | 8.3:+26919622 | MS.gene87466:CDS |
AAGGGTACAATTATTGGAAG+TGG | 0.485898 | 8.3:+26916442 | MS.gene87466:CDS |
CTATTTCCAACCAAAACTGC+TGG | 0.488138 | 8.3:-26917750 | None:intergenic |
CTGCTTTGATTGCGGCAGCT+GGG | 0.491687 | 8.3:+26918158 | MS.gene87466:CDS |
CACTATGTTGTGCAAGGAGA+AGG | 0.505318 | 8.3:+26916480 | MS.gene87466:CDS |
GTGGGGTGACCTTGATCCAT+GGG | 0.513395 | 8.3:+26919511 | MS.gene87466:CDS |
GTGCATCTGCATTCCACTGG+AGG | 0.518010 | 8.3:+26916532 | MS.gene87466:CDS |
CCAGCTCAAGACCCCAATGC+CGG | 0.518422 | 8.3:+26918920 | MS.gene87466:CDS |
GGTGACCTTGATCCATGGGT+TGG | 0.524906 | 8.3:+26919515 | MS.gene87466:CDS |
CTGGACCAACCCATGGATCA+AGG | 0.525300 | 8.3:-26919520 | None:intergenic |
GTTTATGCCTTAGACTTGCT+AGG | 0.529480 | 8.3:+26917636 | MS.gene87466:CDS |
ACTCTTGTTAACTTGCAAGC+CGG | 0.530091 | 8.3:+26919581 | MS.gene87466:CDS |
TCACCCCACAGCAGAAGCAA+CGG | 0.531181 | 8.3:-26919497 | None:intergenic |
TAGACTTGCTAGGATTTGGG+TGG | 0.532649 | 8.3:+26917646 | MS.gene87466:CDS |
GTTGTTCTACTGAATTCTGC+AGG | 0.533043 | 8.3:+26918202 | MS.gene87466:CDS |
AAAGCCGAGTTCACAAGCTC+AGG | 0.542509 | 8.3:-26919626 | None:intergenic |
ATAAATAACTAACCTTGAGA+TGG | 0.545468 | 8.3:-26915881 | None:intergenic |
GCACCTGTAATAAACTTCTC+CGG | 0.546799 | 8.3:-26918939 | None:intergenic |
AGCTCAGGTATCTCGTCGTG+TGG | 0.554872 | 8.3:-26919611 | None:intergenic |
GCTTTCGCTGGACCAACCCA+TGG | 0.559220 | 8.3:-26919527 | None:intergenic |
ACAACCCCAGTGACAGACTC+AGG | 0.566244 | 8.3:-26918184 | None:intergenic |
AGAGACTTTAGGAGTAAGAG+TGG | 0.566979 | 8.3:-26919663 | None:intergenic |
AAAATTCACTATGTTGTGCA+AGG | 0.574133 | 8.3:+26916474 | MS.gene87466:CDS |
AGATTACCATACAAAGCAGA+AGG | 0.574456 | 8.3:+26916423 | MS.gene87466:CDS |
GGCAGTCGAAGCAACCCGCT+CGG | 0.575833 | 8.3:+26918341 | MS.gene87466:CDS |
AAGACTGATTCAATCCGAGC+GGG | 0.577428 | 8.3:-26918355 | None:intergenic |
AGGATTTACTGCTTTGATTG+CGG | 0.577475 | 8.3:+26918150 | MS.gene87466:CDS |
AAACCATGAATAAGAACAAG+AGG | 0.582877 | 8.3:-26916507 | None:intergenic |
TCTGCAGGACAATTTGGCGA+TGG | 0.584615 | 8.3:+26918217 | MS.gene87466:CDS |
TCAAGTCGTGGACTTCATGA+AGG | 0.598557 | 8.3:+26917713 | MS.gene87466:CDS |
GTACAATTATTGGAAGTGGA+AGG | 0.599023 | 8.3:+26916446 | MS.gene87466:CDS |
TGAAAGAAACAAACCTCCAG+TGG | 0.601193 | 8.3:-26916545 | None:intergenic |
CACAAGATAGTCATCCACAT+TGG | 0.603615 | 8.3:-26918882 | None:intergenic |
TCACAAGCTCAACCATCTCA+AGG | 0.605473 | 8.3:+26915869 | MS.gene87466:CDS |
TGCCCGTTGCTTCTGCTGTG+GGG | 0.606378 | 8.3:+26919494 | MS.gene87466:CDS |
CTATGATGCCATGGTGTGGA+GGG | 0.613064 | 8.3:+26917689 | MS.gene87466:CDS |
CCATGAATAAGAACAAGAGG+AGG | 0.618576 | 8.3:-26916504 | None:intergenic |
GCTCAGGTATCTCGTCGTGT+GGG | 0.624471 | 8.3:-26919610 | None:intergenic |
ACTATGATGCCATGGTGTGG+AGG | 0.627349 | 8.3:+26917688 | MS.gene87466:CDS |
ACTCGTCGACTATGATGCCA+TGG | 0.630961 | 8.3:+26917680 | MS.gene87466:CDS |
TCGACTATGATGCCATGGTG+TGG | 0.634074 | 8.3:+26917685 | MS.gene87466:CDS |
TCAAAGCAGTAAATCCTCCA+AGG | 0.637932 | 8.3:-26918144 | None:intergenic |
CAATGTGGATGACTATCTTG+TGG | 0.643108 | 8.3:+26918883 | MS.gene87466:CDS |
TAAGGAACAGAAAACTTCAG+AGG | 0.651193 | 8.3:+26918243 | MS.gene87466:CDS |
AATAAACTTCTCCGGCATTG+GGG | 0.651870 | 8.3:-26918931 | None:intergenic |
TAAATCCAAGAACTACACGC+TGG | 0.652514 | 8.3:-26918312 | None:intergenic |
AGAATTAGCTAAGAAACACA+AGG | 0.658213 | 8.3:+26917614 | MS.gene87466:CDS |
GACTTGATCCCTCCACACCA+TGG | 0.665450 | 8.3:-26917697 | None:intergenic |
ATCTTGTGGAATCTATAACA+AGG | 0.665755 | 8.3:+26918897 | MS.gene87466:CDS |
CATGAATAAGAACAAGAGGA+GGG | 0.669208 | 8.3:-26916503 | None:intergenic |
GGTGTGGAGGGATCAAGTCG+TGG | 0.671418 | 8.3:+26917701 | MS.gene87466:CDS |
GATTACCATACAAAGCAGAA+GGG | 0.686937 | 8.3:+26916424 | MS.gene87466:CDS |
TAAGACTGATTCAATCCGAG+CGG | 0.726541 | 8.3:-26918356 | None:intergenic |
GTTGCCTGAGTCTGTCACTG+GGG | 0.743384 | 8.3:+26918180 | MS.gene87466:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAACAAAAAATTAACTTTT+CGG | - | chr8.3:26917541-26917560 | None:intergenic | 10.0% |
!!! | ATTTTATATGCTTATATTTA+TGG | + | chr8.3:26916370-26916389 | MS.gene87466:intron | 10.0% |
!! | AATATATAGTTGATTATGTA+CGG | - | chr8.3:26919167-26919186 | None:intergenic | 15.0% |
!! | AGTAATAAAATAATTAAGAC+AGG | - | chr8.3:26919369-26919388 | None:intergenic | 15.0% |
!! | GAAATAAATCTATAACAATA+AGG | + | chr8.3:26919115-26919134 | MS.gene87466:intron | 15.0% |
!! | GATTTCTTTAAATGTTTAAT+AGG | + | chr8.3:26918411-26918430 | MS.gene87466:intron | 15.0% |
!!! | TTAACTTTTTCGAAAAAAAT+AGG | - | chr8.3:26918087-26918106 | None:intergenic | 15.0% |
!! | AGACTAAATTTCCAAAATTA+AGG | - | chr8.3:26917855-26917874 | None:intergenic | 20.0% |
!! | AGTTAATAATATTTATCAGC+TGG | - | chr8.3:26917242-26917261 | None:intergenic | 20.0% |
!! | ATAATAATACTTGTCAGAAA+TGG | - | chr8.3:26915939-26915958 | None:intergenic | 20.0% |
!! | ATATAAACAGCACATATAAA+AGG | - | chr8.3:26916679-26916698 | None:intergenic | 20.0% |
!! | ATTCTAAATTGTTGAAGTTA+TGG | - | chr8.3:26918686-26918705 | None:intergenic | 20.0% |
!! | CACAATTCAATTTACTTAAA+TGG | + | chr8.3:26918804-26918823 | MS.gene87466:intron | 20.0% |
!! | CTAAGCAATAAAACTAAAAA+AGG | - | chr8.3:26916584-26916603 | None:intergenic | 20.0% |
!! | GATAATCTTAAGATATTCTA+TGG | - | chr8.3:26918595-26918614 | None:intergenic | 20.0% |
!! | TAAATTGAATTGTGTTTGAT+TGG | - | chr8.3:26918798-26918817 | None:intergenic | 20.0% |
!! | TAATAATTCGATGTAAATCT+AGG | - | chr8.3:26917791-26917810 | None:intergenic | 20.0% |
!! | TAGATTTACATCGAATTATT+AGG | + | chr8.3:26917790-26917809 | MS.gene87466:intron | 20.0% |
!! | TATAAACAGCACATATAAAA+GGG | - | chr8.3:26916678-26916697 | None:intergenic | 20.0% |
!! | TGTTATAGATTTATTTCCAA+TGG | - | chr8.3:26919112-26919131 | None:intergenic | 20.0% |
!! | TTTCGAAAAAGTTAAAACTA+TGG | + | chr8.3:26918092-26918111 | MS.gene87466:intron | 20.0% |
!!! | AGTTATGGATTTTAGATAAA+AGG | - | chr8.3:26918671-26918690 | None:intergenic | 20.0% |
!!! | AGTTTTTGAATGTTGTTATT+TGG | - | chr8.3:26917086-26917105 | None:intergenic | 20.0% |
!!! | ATTTCTCTTTTGGTATATAT+TGG | + | chr8.3:26919238-26919257 | MS.gene87466:intron | 20.0% |
!!! | CTTTTAAATGTTTACTAAAG+TGG | + | chr8.3:26917501-26917520 | MS.gene87466:intron | 20.0% |
!!! | TCAAAATATCATTTCTCTTT+TGG | + | chr8.3:26919228-26919247 | MS.gene87466:intron | 20.0% |
!!! | TTTCTTAATTTTTTCCCTTT+CGG | - | chr8.3:26916619-26916638 | None:intergenic | 20.0% |
! | AATTTCGACAACAATTTAGA+TGG | - | chr8.3:26919203-26919222 | None:intergenic | 25.0% |
! | ACATATTAAGATTTATGCGA+AGG | - | chr8.3:26917270-26917289 | None:intergenic | 25.0% |
! | AGATTGAACATAACTACATA+AGG | - | chr8.3:26916069-26916088 | None:intergenic | 25.0% |
! | ATAAATAACTAACCTTGAGA+TGG | - | chr8.3:26915884-26915903 | None:intergenic | 25.0% |
! | ATAACATTTGATCAAGAAAG+TGG | - | chr8.3:26917022-26917041 | None:intergenic | 25.0% |
! | ATATCTTAAGATTATCTCCT+AGG | + | chr8.3:26918599-26918618 | MS.gene87466:intron | 25.0% |
! | ATATGAATATACATCTCCAT+TGG | + | chr8.3:26919093-26919112 | MS.gene87466:intron | 25.0% |
! | ATATTCATATAATGACGTTG+TGG | - | chr8.3:26919083-26919102 | None:intergenic | 25.0% |
! | ATATTGGAAAGAAACATACT+AGG | + | chr8.3:26919254-26919273 | MS.gene87466:intron | 25.0% |
! | CATAAGATACTATAACATTC+TGG | - | chr8.3:26918494-26918513 | None:intergenic | 25.0% |
! | TAAAAATCACAAATGAGTCA+GGG | - | chr8.3:26916271-26916290 | None:intergenic | 25.0% |
! | TAAATGCATATATCGAAAGA+AGG | - | chr8.3:26916743-26916762 | None:intergenic | 25.0% |
! | TAGTTATGTTCAATCTATGT+GGG | + | chr8.3:26916073-26916092 | MS.gene87466:intron | 25.0% |
! | TAGTTCTTGGATTTATATTC+TGG | + | chr8.3:26918320-26918339 | MS.gene87466:CDS | 25.0% |
! | TTAAAAATCACAAATGAGTC+AGG | - | chr8.3:26916272-26916291 | None:intergenic | 25.0% |
! | TTAAATTCCTAATGTGATTG+TGG | + | chr8.3:26917470-26917489 | MS.gene87466:intron | 25.0% |
!! | ATTTTAGATAAAAGGATGAG+AGG | - | chr8.3:26918663-26918682 | None:intergenic | 25.0% |
!! | TTAAGAGTTTTTGTATTGTC+TGG | + | chr8.3:26916235-26916254 | MS.gene87466:intron | 25.0% |
!!! | AAGTTAACAAGAGTTGTTTT+TGG | - | chr8.3:26919575-26919594 | None:intergenic | 25.0% |
!!! | ACTTTTTTCATTGATGACAA+AGG | + | chr8.3:26917297-26917316 | MS.gene87466:intron | 25.0% |
!!! | CTTTTTTCATTGATGACAAA+GGG | + | chr8.3:26917298-26917317 | MS.gene87466:intron | 25.0% |
!!! | TAATTCTGGAATATTGTATC+TGG | - | chr8.3:26917601-26917620 | None:intergenic | 25.0% |
!!! | TATTTTCAAGATTTGAATCG+CGG | + | chr8.3:26915956-26915975 | MS.gene87466:intron | 25.0% |
!!! | TGCTAGTTTTTTTTCTTACT+AGG | + | chr8.3:26918767-26918786 | MS.gene87466:intron | 25.0% |
AAAATTCACTATGTTGTGCA+AGG | + | chr8.3:26916474-26916493 | MS.gene87466:CDS | 30.0% | |
AAACCATGAATAAGAACAAG+AGG | - | chr8.3:26916510-26916529 | None:intergenic | 30.0% | |
AAACTGTGAAACTACAGAAT+AGG | + | chr8.3:26918445-26918464 | MS.gene87466:intron | 30.0% | |
AAATTAAGGAAAACTGTGCA+TGG | - | chr8.3:26917841-26917860 | None:intergenic | 30.0% | |
AACACATTACATGCTATATC+AGG | - | chr8.3:26917333-26917352 | None:intergenic | 30.0% | |
AATAAAAAAGTCTGCAACCA+CGG | - | chr8.3:26916328-26916347 | None:intergenic | 30.0% | |
AGAATTAGCTAAGAAACACA+AGG | + | chr8.3:26917614-26917633 | MS.gene87466:CDS | 30.0% | |
ATATAGTTGATTATGTACGG+TGG | - | chr8.3:26919164-26919183 | None:intergenic | 30.0% | |
ATCTTGTGGAATCTATAACA+AGG | + | chr8.3:26918897-26918916 | MS.gene87466:CDS | 30.0% | |
CGATATGTTATATTTCATGC+AGG | - | chr8.3:26917046-26917065 | None:intergenic | 30.0% | |
GATTTAGTATCTGATGTCAT+GGG | + | chr8.3:26919029-26919048 | MS.gene87466:intron | 30.0% | |
GTAGTTATGTTCAATCTATG+TGG | + | chr8.3:26916072-26916091 | MS.gene87466:intron | 30.0% | |
GTATAAAAACTCTTCCAATG+TGG | + | chr8.3:26918868-26918887 | MS.gene87466:CDS | 30.0% | |
GTTACATGATATCTTCAACT+TGG | + | chr8.3:26918389-26918408 | MS.gene87466:intron | 30.0% | |
TCAAGTTCCTTCTCTTAAAA+AGG | - | chr8.3:26916402-26916421 | None:intergenic | 30.0% | |
TTGTGTTTCTTAGCTAATTC+TGG | - | chr8.3:26917615-26917634 | None:intergenic | 30.0% | |
! | AAACTTCCTTCAAAGGTTTT+AGG | - | chr8.3:26918291-26918310 | None:intergenic | 30.0% |
! | ATTGCTGTTCAATGTTACTT+AGG | - | chr8.3:26916816-26916835 | None:intergenic | 30.0% |
! | CTTGACATATTATTTTCTGC+AGG | + | chr8.3:26919405-26919424 | MS.gene87466:intron | 30.0% |
! | CTTGTTCTTATTCATGGTTT+TGG | + | chr8.3:26916510-26916529 | MS.gene87466:CDS | 30.0% |
! | GAATCAGTCTTAAAAAGTGT+AGG | + | chr8.3:26918367-26918386 | MS.gene87466:intron | 30.0% |
! | GTTTTTCCTAAAACCTTTGA+AGG | + | chr8.3:26918282-26918301 | MS.gene87466:CDS | 30.0% |
! | TGCACAGTTTTCCTTAATTT+TGG | + | chr8.3:26917841-26917860 | MS.gene87466:intron | 30.0% |
!! | GCTTTTTCCTTTTTAAGAGA+AGG | + | chr8.3:26916392-26916411 | MS.gene87466:intron | 30.0% |
!!! | TTGATTTTATTAGCTTTCGC+TGG | - | chr8.3:26919542-26919561 | None:intergenic | 30.0% |
AAATGGCATAAGTGAAAGTG+AGG | - | chr8.3:26915922-26915941 | None:intergenic | 35.0% | |
ACAATTTGGCGATGGAAATA+AGG | + | chr8.3:26918225-26918244 | MS.gene87466:CDS | 35.0% | |
AGATTACCATACAAAGCAGA+AGG | + | chr8.3:26916423-26916442 | MS.gene87466:CDS | 35.0% | |
AGGATTTACTGCTTTGATTG+CGG | + | chr8.3:26918150-26918169 | MS.gene87466:CDS | 35.0% | |
AGTTAATGCTCAATCCGAAA+GGG | + | chr8.3:26916602-26916621 | MS.gene87466:intron | 35.0% | |
AGTTAGTGAGGACAGAATAA+AGG | - | chr8.3:26919325-26919344 | None:intergenic | 35.0% | |
ATGTACATCCAAAGTGACTT+CGG | - | chr8.3:26916161-26916180 | None:intergenic | 35.0% | |
CATGAATAAGAACAAGAGGA+GGG | - | chr8.3:26916506-26916525 | None:intergenic | 35.0% | |
CTGATGTCTATACTCCTAAA+GGG | + | chr8.3:26916934-26916953 | MS.gene87466:intron | 35.0% | |
GAACAGCAATCAATCTGTAT+AGG | + | chr8.3:26916826-26916845 | MS.gene87466:intron | 35.0% | |
GAATTGAATACGCACAGAAT+TGG | - | chr8.3:26916716-26916735 | None:intergenic | 35.0% | |
GATTACCATACAAAGCAGAA+GGG | + | chr8.3:26916424-26916443 | MS.gene87466:CDS | 35.0% | |
GCTTCAAGTGTACTAAATTG+TGG | - | chr8.3:26917195-26917214 | None:intergenic | 35.0% | |
GGATTTAGTATCTGATGTCA+TGG | + | chr8.3:26919028-26919047 | MS.gene87466:intron | 35.0% | |
GTACAATTATTGGAAGTGGA+AGG | + | chr8.3:26916446-26916465 | MS.gene87466:CDS | 35.0% | |
GTTCAAATTTCGCTACACTA+CGG | + | chr8.3:26917929-26917948 | MS.gene87466:intron | 35.0% | |
TAAGGAACAGAAAACTTCAG+AGG | + | chr8.3:26918243-26918262 | MS.gene87466:CDS | 35.0% | |
TAATAAACTTCTCCGGCATT+GGG | - | chr8.3:26918935-26918954 | None:intergenic | 35.0% | |
TAGTTAATGCTCAATCCGAA+AGG | + | chr8.3:26916601-26916620 | MS.gene87466:intron | 35.0% | |
TCTGATGTCTATACTCCTAA+AGG | + | chr8.3:26916933-26916952 | MS.gene87466:intron | 35.0% | |
TCTTACAAACTAGTTCCGTA+AGG | - | chr8.3:26916012-26916031 | None:intergenic | 35.0% | |
TGTACCCAAAATTGTTCTTG+CGG | + | chr8.3:26916296-26916315 | MS.gene87466:intron | 35.0% | |
TTATTCTGTCCTCACTAACT+TGG | + | chr8.3:26919325-26919344 | MS.gene87466:intron | 35.0% | |
TTTGGAAATTTAGTCTGTCG+TGG | + | chr8.3:26917859-26917878 | MS.gene87466:intron | 35.0% | |
! | AACGAAGTGTTAACAGATAG+CGG | - | chr8.3:26917965-26917984 | None:intergenic | 35.0% |
! | AAGCAGAAGGGTACAATTAT+TGG | + | chr8.3:26916436-26916455 | MS.gene87466:CDS | 35.0% |
! | AAGGGTACAATTATTGGAAG+TGG | + | chr8.3:26916442-26916461 | MS.gene87466:CDS | 35.0% |
! | TGTTAAAGAACCAGCAGTTT+TGG | + | chr8.3:26917740-26917759 | MS.gene87466:CDS | 35.0% |
!! | ATTTGGCAATTGAGTTGACT+GGG | - | chr8.3:26917069-26917088 | None:intergenic | 35.0% |
!! | GTTGATAATAGCTTGATCCT+AGG | - | chr8.3:26918619-26918638 | None:intergenic | 35.0% |
!! | TATTTGGCAATTGAGTTGAC+TGG | - | chr8.3:26917070-26917089 | None:intergenic | 35.0% |
AACACAGACAAAGACTGACT+AGG | - | chr8.3:26918979-26918998 | None:intergenic | 40.0% | |
AATAAACTTCTCCGGCATTG+GGG | - | chr8.3:26918934-26918953 | None:intergenic | 40.0% | |
ACTGTTTGGAGAGAGACTTT+AGG | - | chr8.3:26919677-26919696 | None:intergenic | 40.0% | |
ATCAAGACTCCAAGTTAGTG+AGG | - | chr8.3:26919337-26919356 | None:intergenic | 40.0% | |
ATGCCGGAGAAGTTTATTAC+AGG | + | chr8.3:26918936-26918955 | MS.gene87466:CDS | 40.0% | |
CAATGTGGATGACTATCTTG+TGG | + | chr8.3:26918883-26918902 | MS.gene87466:CDS | 40.0% | |
CACAAGATAGTCATCCACAT+TGG | - | chr8.3:26918885-26918904 | None:intergenic | 40.0% | |
CATTACATGCTATATCAGGC+AGG | - | chr8.3:26917329-26917348 | None:intergenic | 40.0% | |
CCATGAATAAGAACAAGAGG+AGG | - | chr8.3:26916507-26916526 | None:intergenic | 40.0% | |
CCTCCTCTTGTTCTTATTCA+TGG | + | chr8.3:26916504-26916523 | MS.gene87466:CDS | 40.0% | |
CTATTTCCAACCAAAACTGC+TGG | - | chr8.3:26917753-26917772 | None:intergenic | 40.0% | |
CTGAATTCTGCAGGACAATT+TGG | + | chr8.3:26918211-26918230 | MS.gene87466:CDS | 40.0% | |
GCACCTGTAATAAACTTCTC+CGG | - | chr8.3:26918942-26918961 | None:intergenic | 40.0% | |
GCTATAGCCACAATCACATT+AGG | - | chr8.3:26917480-26917499 | None:intergenic | 40.0% | |
GCTTGTCTAACTCATCCTTA+CGG | + | chr8.3:26915994-26916013 | MS.gene87466:intron | 40.0% | |
GGACTATTTACTTCCCTTCA+GGG | + | chr8.3:26918735-26918754 | MS.gene87466:intron | 40.0% | |
GTAATAAACTTCTCCGGCAT+TGG | - | chr8.3:26918936-26918955 | None:intergenic | 40.0% | |
GTCAAGACATCAAAAACCGA+GGG | + | chr8.3:26916120-26916139 | MS.gene87466:intron | 40.0% | |
GTTGTTCTACTGAATTCTGC+AGG | + | chr8.3:26918202-26918221 | MS.gene87466:CDS | 40.0% | |
TAAATCCAAGAACTACACGC+TGG | - | chr8.3:26918315-26918334 | None:intergenic | 40.0% | |
TCAAAGCAGTAAATCCTCCA+AGG | - | chr8.3:26918147-26918166 | None:intergenic | 40.0% | |
TCAGTCTTTGTCTGTGTTGT+CGG | + | chr8.3:26918981-26919000 | MS.gene87466:intron | 40.0% | |
TGAAAGAAACAAACCTCCAG+TGG | - | chr8.3:26916548-26916567 | None:intergenic | 40.0% | |
TGCATATCGCAGAACAATAG+TGG | + | chr8.3:26917991-26918010 | MS.gene87466:intron | 40.0% | |
TGTACATCCAAAGTGACTTC+GGG | - | chr8.3:26916160-26916179 | None:intergenic | 40.0% | |
TGTTCAATCTATGTGGGACT+TGG | + | chr8.3:26916079-26916098 | MS.gene87466:intron | 40.0% | |
TTGAGCTTGTGAAGTAAGAG+AGG | - | chr8.3:26915861-26915880 | None:intergenic | 40.0% | |
TTGTACCCTTCTGCTTTGTA+TGG | - | chr8.3:26916432-26916451 | None:intergenic | 40.0% | |
TTTGTCCGAAAACACACATC+TGG | - | chr8.3:26916215-26916234 | None:intergenic | 40.0% | |
! | AGAGACTTTAGGAGTAAGAG+TGG | - | chr8.3:26919666-26919685 | None:intergenic | 40.0% |
! | CGGAACTAGTTTGTAAGATG+AGG | + | chr8.3:26916014-26916033 | MS.gene87466:intron | 40.0% |
! | GTTGTCCAGATGTGTGTTTT+CGG | + | chr8.3:26916207-26916226 | MS.gene87466:intron | 40.0% |
! | GTTTATGCCTTAGACTTGCT+AGG | + | chr8.3:26917636-26917655 | MS.gene87466:CDS | 40.0% |
! | TAAGACTGATTCAATCCGAG+CGG | - | chr8.3:26918359-26918378 | None:intergenic | 40.0% |
! | TCATGATGACTTTTCAGCCT+TGG | + | chr8.3:26918127-26918146 | MS.gene87466:intron | 40.0% |
!! | AAAGAACCAGCAGTTTTGGT+TGG | + | chr8.3:26917744-26917763 | MS.gene87466:CDS | 40.0% |
!! | ACAGAAGCTTGTAGCTTTAG+TGG | + | chr8.3:26918713-26918732 | MS.gene87466:intron | 40.0% |
!! | ACTCTTGTTAACTTGCAAGC+CGG | + | chr8.3:26919581-26919600 | MS.gene87466:CDS | 40.0% |
!! | CAGAAGCTTGTAGCTTTAGT+GGG | + | chr8.3:26918714-26918733 | MS.gene87466:intron | 40.0% |
!! | CCTTAGACTTGCTAGGATTT+GGG | + | chr8.3:26917643-26917662 | MS.gene87466:CDS | 40.0% |
!! | TGAACTCGGCTTTATTGGAT+TGG | + | chr8.3:26919636-26919655 | MS.gene87466:CDS | 40.0% |
!! | TTGGCTTTTCCAATACGTTG+CGG | + | chr8.3:26916098-26916117 | MS.gene87466:intron | 40.0% |
!!! | CAGCAGTTTTGGTTGGAAAT+AGG | + | chr8.3:26917751-26917770 | MS.gene87466:CDS | 40.0% |
AAGACATCAAAAACCGAGGG+AGG | + | chr8.3:26916123-26916142 | MS.gene87466:intron | 45.0% | |
AAGACTGACTAGGACGGAAA+CGG | - | chr8.3:26918969-26918988 | None:intergenic | 45.0% | |
AAGCCAACTATGTCCGTCAT+AGG | + | chr8.3:26919057-26919076 | MS.gene87466:intron | 45.0% | |
AATGACGTTGTGGCCTATGA+CGG | - | chr8.3:26919073-26919092 | None:intergenic | 45.0% | |
ACTCCTAAAGGGAAGAGAAG+AGG | + | chr8.3:26916945-26916964 | MS.gene87466:intron | 45.0% | |
AGCAGAAGAAAGTCCCTGAA+GGG | - | chr8.3:26918751-26918770 | None:intergenic | 45.0% | |
ATGTCTTGACCGCAACGTAT+TGG | - | chr8.3:26916110-26916129 | None:intergenic | 45.0% | |
CACTATGTTGTGCAAGGAGA+AGG | + | chr8.3:26916480-26916499 | MS.gene87466:CDS | 45.0% | |
CAGACAAAGACTGACTAGGA+CGG | - | chr8.3:26918975-26918994 | None:intergenic | 45.0% | |
CCCAAATCCTAGCAAGTCTA+AGG | - | chr8.3:26917646-26917665 | None:intergenic | 45.0% | |
CGCTGGAAAACTTCCTTCAA+AGG | - | chr8.3:26918298-26918317 | None:intergenic | 45.0% | |
GATACCTGAGCTTGTGAACT+CGG | + | chr8.3:26919622-26919641 | MS.gene87466:CDS | 45.0% | |
GGAAATTTAGTCTGTCGTGG+TGG | + | chr8.3:26917862-26917881 | MS.gene87466:intron | 45.0% | |
GGCAACTGGAGTTTCAGTTA+TGG | + | chr8.3:26915832-26915851 | MS.gene87466:CDS | 45.0% | |
GGGACTATTTACTTCCCTTC+AGG | + | chr8.3:26918734-26918753 | MS.gene87466:intron | 45.0% | |
GGTCAAGACATCAAAAACCG+AGG | + | chr8.3:26916119-26916138 | MS.gene87466:intron | 45.0% | |
GTTCCTCTTCTCTTCCCTTT+AGG | - | chr8.3:26916951-26916970 | None:intergenic | 45.0% | |
TAGCAGAAGAAAGTCCCTGA+AGG | - | chr8.3:26918752-26918771 | None:intergenic | 45.0% | |
TCAAGTCGTGGACTTCATGA+AGG | + | chr8.3:26917713-26917732 | MS.gene87466:CDS | 45.0% | |
TCACAAGCTCAACCATCTCA+AGG | + | chr8.3:26915869-26915888 | MS.gene87466:CDS | 45.0% | |
! | AAGACTGATTCAATCCGAGC+GGG | - | chr8.3:26918358-26918377 | None:intergenic | 45.0% |
! | ATTGCGTAGCTTGTCAATGC+AGG | + | chr8.3:26918844-26918863 | MS.gene87466:intron | 45.0% |
! | GCTTGTGAACTCGGCTTTAT+TGG | + | chr8.3:26919631-26919650 | MS.gene87466:CDS | 45.0% |
! | GTTTTCCAGCGTGTAGTTCT+TGG | + | chr8.3:26918307-26918326 | MS.gene87466:CDS | 45.0% |
! | TGATGACTTTTCAGCCTTGG+AGG | + | chr8.3:26918130-26918149 | MS.gene87466:intron | 45.0% |
! | TGGGCCGCAAGAACAATTTT+GGG | - | chr8.3:26916303-26916322 | None:intergenic | 45.0% |
! | TTTTCCACCCGAAGTCACTT+TGG | + | chr8.3:26916150-26916169 | MS.gene87466:intron | 45.0% |
!! | CTCTTGTTAACTTGCAAGCC+GGG | + | chr8.3:26919582-26919601 | MS.gene87466:CDS | 45.0% |
!! | GCCTTAGACTTGCTAGGATT+TGG | + | chr8.3:26917642-26917661 | MS.gene87466:CDS | 45.0% |
!! | TAGACTTGCTAGGATTTGGG+TGG | + | chr8.3:26917646-26917665 | MS.gene87466:CDS | 45.0% |
!!! | TTTTTATTTATTAAAAACAT+GGG | + | chr8.3:26916340-26916359 | MS.gene87466:intron | 5.0% |
!!! | TTTTTTATTTATTAAAAACA+TGG | + | chr8.3:26916339-26916358 | MS.gene87466:intron | 5.0% |
AAAAGTCTGCAACCACGGTC+TGG | - | chr8.3:26916323-26916342 | None:intergenic | 50.0% | |
AAAGCCGAGTTCACAAGCTC+AGG | - | chr8.3:26919629-26919648 | None:intergenic | 50.0% | |
AAAGTCTGCAACCACGGTCT+GGG | - | chr8.3:26916322-26916341 | None:intergenic | 50.0% | |
AACACAATGGTGTCCATCGC+TGG | + | chr8.3:26917887-26917906 | MS.gene87466:intron | 50.0% | |
ACATCCAAAGTGACTTCGGG+TGG | - | chr8.3:26916157-26916176 | None:intergenic | 50.0% | |
ACTATGATGCCATGGTGTGG+AGG | + | chr8.3:26917688-26917707 | MS.gene87466:CDS | 50.0% | |
CTATGATGCCATGGTGTGGA+GGG | + | chr8.3:26917689-26917708 | MS.gene87466:CDS | 50.0% | |
CTATTTGTCGTGACCAGCGA+TGG | - | chr8.3:26917903-26917922 | None:intergenic | 50.0% | |
GCCTGTATAGTGTGGCATGA+CGG | + | chr8.3:26919007-26919026 | MS.gene87466:intron | 50.0% | |
GGTGGAAAAAGTTCCTCCCT+CGG | - | chr8.3:26916139-26916158 | None:intergenic | 50.0% | |
GTCGGATTGCCTGTATAGTG+TGG | + | chr8.3:26918999-26919018 | MS.gene87466:intron | 50.0% | |
TCCGTCATGCCACACTATAC+AGG | - | chr8.3:26919011-26919030 | None:intergenic | 50.0% | |
TCGACTATGATGCCATGGTG+TGG | + | chr8.3:26917685-26917704 | MS.gene87466:CDS | 50.0% | |
TCTGCAGGACAATTTGGCGA+TGG | + | chr8.3:26918217-26918236 | MS.gene87466:CDS | 50.0% | |
TGTCGTGGTGGCAAACACAA+TGG | + | chr8.3:26917874-26917893 | MS.gene87466:intron | 50.0% | |
TTGGTGCATCTGCATTCCAC+TGG | + | chr8.3:26916529-26916548 | MS.gene87466:CDS | 50.0% | |
! | ACTCGTCGACTATGATGCCA+TGG | + | chr8.3:26917680-26917699 | MS.gene87466:CDS | 50.0% |
! | CTGGGCCGCAAGAACAATTT+TGG | - | chr8.3:26916304-26916323 | None:intergenic | 50.0% |
!! | TGGCCTATGACGGACATAGT+TGG | - | chr8.3:26919063-26919082 | None:intergenic | 50.0% |
ACAACCCCAGTGACAGACTC+AGG | - | chr8.3:26918187-26918206 | None:intergenic | 55.0% | |
ACTGCTTTGATTGCGGCAGC+TGG | + | chr8.3:26918157-26918176 | MS.gene87466:CDS | 55.0% | |
AGCTCAGGTATCTCGTCGTG+TGG | - | chr8.3:26919614-26919633 | None:intergenic | 55.0% | |
CTGCTTTGATTGCGGCAGCT+GGG | + | chr8.3:26918158-26918177 | MS.gene87466:CDS | 55.0% | |
CTGGACCAACCCATGGATCA+AGG | - | chr8.3:26919523-26919542 | None:intergenic | 55.0% | |
GACTTGATCCCTCCACACCA+TGG | - | chr8.3:26917700-26917719 | None:intergenic | 55.0% | |
GCTCAGGTATCTCGTCGTGT+GGG | - | chr8.3:26919613-26919632 | None:intergenic | 55.0% | |
GGTGACCTTGATCCATGGGT+TGG | + | chr8.3:26919515-26919534 | MS.gene87466:CDS | 55.0% | |
GGTTGCCTGAGTCTGTCACT+GGG | + | chr8.3:26918179-26918198 | MS.gene87466:CDS | 55.0% | |
GTGCATCTGCATTCCACTGG+AGG | + | chr8.3:26916532-26916551 | MS.gene87466:CDS | 55.0% | |
GTGGGGTGACCTTGATCCAT+GGG | + | chr8.3:26919511-26919530 | MS.gene87466:CDS | 55.0% | |
GTTGCCTGAGTCTGTCACTG+GGG | + | chr8.3:26918180-26918199 | MS.gene87466:CDS | 55.0% | |
TCACCCCACAGCAGAAGCAA+CGG | - | chr8.3:26919500-26919519 | None:intergenic | 55.0% | |
TGTGGGGTGACCTTGATCCA+TGG | + | chr8.3:26919510-26919529 | MS.gene87466:CDS | 55.0% | |
TTGCCCGTTGCTTCTGCTGT+GGG | + | chr8.3:26919493-26919512 | MS.gene87466:CDS | 55.0% | |
CACCCCACAGCAGAAGCAAC+GGG | - | chr8.3:26919499-26919518 | None:intergenic | 60.0% | |
CCAGCTCAAGACCCCAATGC+CGG | + | chr8.3:26918920-26918939 | MS.gene87466:CDS | 60.0% | |
CTTGCCCGTTGCTTCTGCTG+TGG | + | chr8.3:26919492-26919511 | MS.gene87466:CDS | 60.0% | |
GCTTTCGCTGGACCAACCCA+TGG | - | chr8.3:26919530-26919549 | None:intergenic | 60.0% | |
GGGTTGCCTGAGTCTGTCAC+TGG | + | chr8.3:26918178-26918197 | MS.gene87466:CDS | 60.0% | |
GGTGTGGAGGGATCAAGTCG+TGG | + | chr8.3:26917701-26917720 | MS.gene87466:CDS | 60.0% | |
TGCCCGTTGCTTCTGCTGTG+GGG | + | chr8.3:26919494-26919513 | MS.gene87466:CDS | 60.0% | |
CTCGTCGTGTGGGCAATGCC+CGG | - | chr8.3:26919603-26919622 | None:intergenic | 65.0% | |
GGCAGTCGAAGCAACCCGCT+CGG | + | chr8.3:26918341-26918360 | MS.gene87466:CDS | 65.0% | |
TGTTCTTGCGGCCCAGACCG+TGG | + | chr8.3:26916308-26916327 | MS.gene87466:intron | 65.0% | |
! | CCGGCATTGGGGTCTTGAGC+TGG | - | chr8.3:26918923-26918942 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 26915830 | 26919700 | 26915830 | ID=MS.gene87466 |
chr8.3 | mRNA | 26915830 | 26919700 | 26915830 | ID=MS.gene87466.t1;Parent=MS.gene87466 |
chr8.3 | exon | 26915830 | 26915890 | 26915830 | ID=MS.gene87466.t1.exon1;Parent=MS.gene87466.t1 |
chr8.3 | CDS | 26915830 | 26915890 | 26915830 | ID=cds.MS.gene87466.t1;Parent=MS.gene87466.t1 |
chr8.3 | exon | 26916409 | 26916553 | 26916409 | ID=MS.gene87466.t1.exon2;Parent=MS.gene87466.t1 |
chr8.3 | CDS | 26916409 | 26916553 | 26916409 | ID=cds.MS.gene87466.t1;Parent=MS.gene87466.t1 |
chr8.3 | exon | 26917602 | 26917772 | 26917602 | ID=MS.gene87466.t1.exon3;Parent=MS.gene87466.t1 |
chr8.3 | CDS | 26917602 | 26917772 | 26917602 | ID=cds.MS.gene87466.t1;Parent=MS.gene87466.t1 |
chr8.3 | exon | 26918144 | 26918384 | 26918144 | ID=MS.gene87466.t1.exon4;Parent=MS.gene87466.t1 |
chr8.3 | CDS | 26918144 | 26918384 | 26918144 | ID=cds.MS.gene87466.t1;Parent=MS.gene87466.t1 |
chr8.3 | exon | 26918866 | 26918957 | 26918866 | ID=MS.gene87466.t1.exon5;Parent=MS.gene87466.t1 |
chr8.3 | CDS | 26918866 | 26918957 | 26918866 | ID=cds.MS.gene87466.t1;Parent=MS.gene87466.t1 |
chr8.3 | exon | 26919427 | 26919700 | 26919427 | ID=MS.gene87466.t1.exon6;Parent=MS.gene87466.t1 |
chr8.3 | CDS | 26919427 | 26919700 | 26919427 | ID=cds.MS.gene87466.t1;Parent=MS.gene87466.t1 |
Gene Sequence |
Protein sequence |