Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0163670 | XP_013467939.1 | 78.947 | 95 | 20 | 0 | 1 | 95 | 1 | 95 | 3.53e-44 | 158 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0163670 | sp|Q2V3R1|FB346_ARATH | 55.844 | 77 | 34 | 0 | 16 | 92 | 21 | 97 | 1.84e-23 | 97.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0163670 | A0A072VK35 | 78.947 | 95 | 20 | 0 | 1 | 95 | 1 | 95 | 1.69e-44 | 158 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0163670 | -0.819380 | 1.197043e-52 | -8.615850e-47 |
| Msa0011010 | Msa0163670 | 0.814396 | 1.574054e-51 | -8.615850e-47 |
| Msa0011040 | Msa0163670 | 0.813053 | 3.110264e-51 | -8.615850e-47 |
| Msa0013270 | Msa0163670 | 0.819374 | 1.201141e-52 | -8.615850e-47 |
| Msa0024650 | Msa0163670 | 0.837988 | 3.755958e-57 | -8.615850e-47 |
| Msa0025570 | Msa0163670 | 0.825264 | 5.153834e-54 | -8.615850e-47 |
| Msa0042210 | Msa0163670 | -0.801340 | 9.432050e-49 | -8.615850e-47 |
| Msa0042520 | Msa0163670 | -0.801197 | 1.008746e-48 | -8.615850e-47 |
| Msa0048380 | Msa0163670 | 0.815272 | 1.006459e-51 | -8.615850e-47 |
| Msa0060410 | Msa0163670 | 0.800256 | 1.569278e-48 | -8.615850e-47 |
| Msa0073110 | Msa0163670 | 0.811053 | 8.485808e-51 | -8.615850e-47 |
| Msa0080100 | Msa0163670 | -0.800474 | 1.417261e-48 | -8.615850e-47 |
| Msa0089190 | Msa0163670 | 0.812854 | 3.437235e-51 | -8.615850e-47 |
| Msa0098380 | Msa0163670 | 0.818575 | 1.824864e-52 | -8.615850e-47 |
| Msa0105140 | Msa0163670 | -0.808041 | 3.762783e-50 | -8.615850e-47 |
| Msa0106540 | Msa0163670 | 0.812277 | 4.596462e-51 | -8.615850e-47 |
| Msa0107830 | Msa0163670 | 0.801680 | 8.032444e-49 | -8.615850e-47 |
| Msa0111780 | Msa0163670 | 0.801228 | 9.939293e-49 | -8.615850e-47 |
| Msa0117650 | Msa0163670 | 0.848721 | 5.117289e-60 | -8.615850e-47 |
| Msa0120450 | Msa0163670 | 0.802039 | 6.779157e-49 | -8.615850e-47 |
| Msa0121320 | Msa0163670 | 0.810104 | 1.360896e-50 | -8.615850e-47 |
| Msa0127350 | Msa0163670 | -0.803101 | 4.094284e-49 | -8.615850e-47 |
| Msa0136000 | Msa0163670 | 0.813318 | 2.719435e-51 | -8.615850e-47 |
| Msa0136090 | Msa0163670 | 0.818332 | 2.071380e-52 | -8.615850e-47 |
| Msa0162170 | Msa0163670 | -0.802544 | 5.334680e-49 | -8.615850e-47 |
| Msa0163670 | Msa0163690 | 0.831870 | 1.306460e-55 | -8.615850e-47 |
| Msa0163670 | Msa0167570 | -0.812152 | 4.894712e-51 | -8.615850e-47 |
| Msa0163670 | Msa0185040 | 0.802034 | 6.793395e-49 | -8.615850e-47 |
| Msa0163670 | Msa0193950 | 0.806937 | 6.453076e-50 | -8.615850e-47 |
| Msa0163670 | Msa0223040 | 0.828616 | 8.142310e-55 | -8.615850e-47 |
| Msa0163670 | Msa0253230 | -0.803495 | 3.392705e-49 | -8.615850e-47 |
| Msa0163670 | Msa0257760 | 0.801006 | 1.103652e-48 | -8.615850e-47 |
| Msa0163670 | Msa0264230 | 0.809470 | 1.862454e-50 | -8.615850e-47 |
| Msa0163670 | Msa0275730 | 0.826639 | 2.429619e-54 | -8.615850e-47 |
| Msa0163670 | Msa0279810 | 0.804627 | 1.972514e-49 | -8.615850e-47 |
| Msa0163670 | Msa0280160 | 0.801862 | 7.369136e-49 | -8.615850e-47 |
| Msa0163670 | Msa0286360 | 0.812958 | 3.262845e-51 | -8.615850e-47 |
| Msa0163670 | Msa0293060 | -0.821178 | 4.635515e-53 | -8.615850e-47 |
| Msa0163670 | Msa0302200 | 0.807418 | 5.104242e-50 | -8.615850e-47 |
| Msa0163670 | Msa0307630 | 0.831659 | 1.473015e-55 | -8.615850e-47 |
| Msa0163670 | Msa0314240 | 0.802181 | 6.337742e-49 | -8.615850e-47 |
| Msa0163670 | Msa0319220 | 0.805576 | 1.248838e-49 | -8.615850e-47 |
| Msa0163670 | Msa0331070 | -0.800170 | 1.634306e-48 | -8.615850e-47 |
| Msa0163670 | Msa0339530 | 0.811512 | 6.747353e-51 | -8.615850e-47 |
| Msa0163670 | Msa0340700 | -0.814351 | 1.610139e-51 | -8.615850e-47 |
| Msa0163670 | Msa0354600 | 0.858180 | 9.829645e-63 | -8.615850e-47 |
| Msa0163670 | Msa0356270 | 0.805164 | 1.523795e-49 | -8.615850e-47 |
| Msa0163670 | Msa0357470 | 0.816498 | 5.362865e-52 | -8.615850e-47 |
| Msa0163670 | Msa0357510 | 0.830588 | 2.698637e-55 | -8.615850e-47 |
| Msa0163670 | Msa0357530 | 0.823392 | 1.420187e-53 | -8.615850e-47 |
| Msa0163670 | Msa0357550 | 0.803997 | 2.668670e-49 | -8.615850e-47 |
| Msa0163670 | Msa0357560 | 0.811822 | 5.776366e-51 | -8.615850e-47 |
| Msa0163670 | Msa0386230 | -0.808429 | 3.110792e-50 | -8.615850e-47 |
| Msa0163670 | Msa0412580 | -0.802679 | 5.003135e-49 | -8.615850e-47 |
| Msa0163670 | Msa0415010 | 0.800811 | 1.209789e-48 | -8.615850e-47 |
| Msa0163670 | Msa0433090 | 0.812153 | 4.892031e-51 | -8.615850e-47 |
| Msa0163670 | Msa0444770 | -0.808209 | 3.466102e-50 | -8.615850e-47 |
| Msa0163670 | Msa0454770 | 0.802955 | 4.388715e-49 | -8.615850e-47 |
| Msa0163670 | Msa0459930 | 0.820289 | 7.421197e-53 | -8.615850e-47 |
| Msa0163670 | Msa0464620 | 0.810431 | 1.156951e-50 | -8.615850e-47 |
| Msa0163670 | Msa0474660 | -0.813898 | 2.027475e-51 | -8.615850e-47 |
| Msa0163670 | Msa0484590 | -0.802170 | 6.368762e-49 | -8.615850e-47 |
| Msa0163670 | Msa0487480 | -0.801561 | 8.496825e-49 | -8.615850e-47 |
| Msa0163670 | Msa0492330 | -0.814900 | 1.217198e-51 | -8.615850e-47 |
| Msa0163670 | Msa0506700 | -0.807718 | 4.408351e-50 | -8.615850e-47 |
| Msa0163670 | Msa0516000 | -0.800706 | 1.270999e-48 | -8.615850e-47 |
| Msa0163670 | Msa0524710 | 0.831550 | 1.566718e-55 | -8.615850e-47 |
| Msa0163670 | Msa0525180 | -0.821491 | 3.925664e-53 | -8.615850e-47 |
| Msa0163670 | Msa0540640 | 0.809745 | 1.625778e-50 | -8.615850e-47 |
| Msa0163670 | Msa0547370 | 0.837251 | 5.802555e-57 | -8.615850e-47 |
| Msa0163670 | Msa0557240 | 0.815113 | 1.091990e-51 | -8.615850e-47 |
| Msa0163670 | Msa0557440 | -0.800778 | 1.228671e-48 | -8.615850e-47 |
| Msa0163670 | Msa0561830 | 0.850037 | 2.200434e-60 | -8.615850e-47 |
| Msa0163670 | Msa0567330 | 0.813353 | 2.672237e-51 | -8.615850e-47 |
| Msa0163670 | Msa0567570 | 0.828362 | 9.380343e-55 | -8.615850e-47 |
| Msa0163670 | Msa0568920 | 0.810046 | 1.400050e-50 | -8.615850e-47 |
| Msa0163670 | Msa0580410 | -0.807794 | 4.247541e-50 | -8.615850e-47 |
| Msa0163670 | Msa0580890 | -0.809456 | 1.875111e-50 | -8.615850e-47 |
| Msa0163670 | Msa0587730 | 0.807499 | 4.906236e-50 | -8.615850e-47 |
| Msa0163670 | Msa0597370 | -0.813323 | 2.712590e-51 | -8.615850e-47 |
| Msa0163670 | Msa0597800 | 0.818005 | 2.456760e-52 | -8.615850e-47 |
| Msa0163670 | Msa0597820 | 0.822618 | 2.151331e-53 | -8.615850e-47 |
| Msa0163670 | Msa0602100 | 0.813527 | 2.446736e-51 | -8.615850e-47 |
| Msa0163670 | Msa0603310 | 0.810193 | 1.301876e-50 | -8.615850e-47 |
| Msa0163670 | Msa0606600 | 0.801691 | 7.991405e-49 | -8.615850e-47 |
| Msa0163670 | Msa0614960 | 0.817595 | 3.039273e-52 | -8.615850e-47 |
| Msa0163670 | Msa0619030 | -0.838039 | 3.643148e-57 | -8.615850e-47 |
| Msa0163670 | Msa0637590 | 0.810819 | 9.533285e-51 | -8.615850e-47 |
| Msa0163670 | Msa0638300 | -0.812402 | 4.315978e-51 | -8.615850e-47 |
| Msa0163670 | Msa0643230 | 0.825750 | 3.953483e-54 | -8.615850e-47 |
| Msa0163670 | Msa0644340 | 0.816969 | 4.203826e-52 | -8.615850e-47 |
| Msa0163670 | Msa0647300 | 0.806634 | 7.477584e-50 | -8.615850e-47 |
| Msa0163670 | Msa0652590 | 0.802114 | 6.542388e-49 | -8.615850e-47 |
| Msa0163670 | Msa0655370 | 0.851065 | 1.131274e-60 | -8.615850e-47 |
| Msa0163670 | Msa0659230 | 0.830128 | 3.496002e-55 | -8.615850e-47 |
| Msa0163670 | Msa0666950 | 0.823049 | 1.707535e-53 | -8.615850e-47 |
| Msa0163670 | Msa0673620 | -0.805252 | 1.460168e-49 | -8.615850e-47 |
| Msa0163670 | Msa0676570 | -0.803823 | 2.899866e-49 | -8.615850e-47 |
| Msa0163670 | Msa0679220 | 0.816096 | 6.595309e-52 | -8.615850e-47 |
| Msa0163670 | Msa0680460 | 0.806659 | 7.387055e-50 | -8.615850e-47 |
| Msa0163670 | Msa0682110 | 0.811252 | 7.682539e-51 | -8.615850e-47 |
| Msa0163670 | Msa0682910 | 0.814092 | 1.837155e-51 | -8.615850e-47 |
| Msa0163670 | Msa0685390 | -0.812756 | 3.611473e-51 | -8.615850e-47 |
| Msa0163670 | Msa0686830 | 0.809937 | 1.478207e-50 | -8.615850e-47 |
| Msa0163670 | Msa0689840 | 0.820757 | 5.794201e-53 | -8.615850e-47 |
| Msa0163670 | Msa0695250 | -0.811375 | 7.223749e-51 | -8.615850e-47 |
| Msa0163670 | Msa0699170 | 0.839335 | 1.684814e-57 | -8.615850e-47 |
| Msa0163670 | Msa0714230 | -0.821958 | 3.061180e-53 | -8.615850e-47 |
| Msa0163670 | Msa0730160 | 0.807829 | 4.175289e-50 | -8.615850e-47 |
| Msa0163670 | Msa0736560 | 0.815905 | 7.273239e-52 | -8.615850e-47 |
| Msa0163670 | Msa0743370 | 0.841951 | 3.480305e-58 | -8.615850e-47 |
| Msa0163670 | Msa0750200 | -0.804770 | 1.841483e-49 | -8.615850e-47 |
| Msa0163670 | Msa0750830 | 0.801520 | 8.661433e-49 | -8.615850e-47 |
| Msa0163670 | Msa0755880 | 0.803951 | 2.728444e-49 | -8.615850e-47 |
| Msa0163670 | Msa0766170 | 0.818710 | 1.700856e-52 | -8.615850e-47 |
| Msa0163670 | Msa0766910 | -0.801213 | 1.001033e-48 | -8.615850e-47 |
| Msa0163670 | Msa0786600 | -0.803507 | 3.372595e-49 | -8.615850e-47 |
| Msa0163670 | Msa0792410 | 0.830868 | 2.304431e-55 | -8.615850e-47 |
| Msa0163670 | Msa0795910 | -0.808127 | 3.607352e-50 | -8.615850e-47 |
| Msa0163670 | Msa0800120 | 0.815003 | 1.154721e-51 | -8.615850e-47 |
| Msa0163670 | Msa0800150 | 0.824911 | 6.245200e-54 | -8.615850e-47 |
| Msa0163670 | Msa0802600 | 0.822743 | 2.011417e-53 | -8.615850e-47 |
| Msa0163670 | Msa0812720 | 0.815801 | 7.673678e-52 | -8.615850e-47 |
| Msa0163670 | Msa0814660 | 0.814564 | 1.444490e-51 | -8.615850e-47 |
| Msa0163670 | Msa0822680 | -0.812430 | 4.257680e-51 | -8.615850e-47 |
| Msa0163670 | Msa0827800 | 0.805505 | 1.292484e-49 | -8.615850e-47 |
| Msa0163670 | Msa0829250 | -0.809309 | 2.016763e-50 | -8.615850e-47 |
| Msa0163670 | Msa0831310 | 0.810880 | 9.251340e-51 | -8.615850e-47 |
| Msa0163670 | Msa0833360 | -0.804721 | 1.885420e-49 | -8.615850e-47 |
| Msa0163670 | Msa0838210 | 0.807415 | 5.110856e-50 | -8.615850e-47 |
| Msa0163670 | Msa0873880 | 0.802643 | 5.089368e-49 | -8.615850e-47 |
| Msa0163670 | Msa0882480 | -0.817347 | 3.457645e-52 | -8.615850e-47 |
| Msa0163670 | Msa0896920 | 0.802591 | 5.216113e-49 | -8.615850e-47 |
| Msa0163670 | Msa0904590 | 0.826595 | 2.488863e-54 | -8.615850e-47 |
| Msa0163670 | Msa0910610 | 0.808174 | 3.525828e-50 | -8.615850e-47 |
| Msa0163670 | Msa0925940 | 0.816810 | 4.563608e-52 | -8.615850e-47 |
| Msa0163670 | Msa0936630 | 0.805652 | 1.203876e-49 | -8.615850e-47 |
| Msa0163670 | Msa0945160 | -0.812081 | 5.071823e-51 | -8.615850e-47 |
| Msa0163670 | Msa0964400 | -0.819036 | 1.434268e-52 | -8.615850e-47 |
| Msa0163670 | Msa0966590 | 0.824042 | 9.999109e-54 | -8.615850e-47 |
| Msa0163670 | Msa0973850 | 0.800672 | 1.291194e-48 | -8.615850e-47 |
| Msa0163670 | Msa1001120 | 0.821359 | 4.210115e-53 | -8.615850e-47 |
| Msa0163670 | Msa1002550 | -0.808520 | 2.974067e-50 | -8.615850e-47 |
| Msa0163670 | Msa1019420 | 0.811200 | 7.885135e-51 | -8.615850e-47 |
| Msa0163670 | Msa1029860 | 0.815078 | 1.111693e-51 | -8.615850e-47 |
| Msa0163670 | Msa1030210 | 0.810837 | 9.448480e-51 | -8.615850e-47 |
| Msa0163670 | Msa1031190 | -0.804375 | 2.226749e-49 | -8.615850e-47 |
| Msa0163670 | Msa1035050 | 0.826052 | 3.351941e-54 | -8.615850e-47 |
| Msa0163670 | Msa1040330 | 0.817232 | 3.669251e-52 | -8.615850e-47 |
| Msa0163670 | Msa1058550 | -0.835086 | 2.059596e-56 | -8.615850e-47 |
| Msa0163670 | Msa1069250 | 0.806707 | 7.219623e-50 | -8.615850e-47 |
| Msa0163670 | Msa1070370 | -0.803144 | 4.009747e-49 | -8.615850e-47 |
| Msa0163670 | Msa1075090 | 0.818347 | 2.055232e-52 | -8.615850e-47 |
| Msa0163670 | Msa1078120 | -0.804577 | 2.020400e-49 | -8.615850e-47 |
| Msa0163670 | Msa1085820 | 0.806800 | 6.897535e-50 | -8.615850e-47 |
| Msa0163670 | Msa1088970 | 0.814638 | 1.391329e-51 | -8.615850e-47 |
| Msa0163670 | Msa1103450 | 0.835819 | 1.344148e-56 | -8.615850e-47 |
| Msa0163670 | Msa1104130 | 0.805170 | 1.519379e-49 | -8.615850e-47 |
| Msa0163670 | Msa1107220 | 0.808834 | 2.548810e-50 | -8.615850e-47 |
| Msa0163670 | Msa1108560 | 0.805412 | 1.351958e-49 | -8.615850e-47 |
| Msa0163670 | Msa1115980 | 0.827910 | 1.204938e-54 | -8.615850e-47 |
| Msa0163670 | Msa1119420 | -0.802147 | 6.439106e-49 | -8.615850e-47 |
| Msa0163670 | Msa1120960 | 0.817786 | 2.752678e-52 | -8.615850e-47 |
| Msa0163670 | Msa1124220 | 0.817460 | 3.260010e-52 | -8.615850e-47 |
| Msa0163670 | Msa1129120 | -0.801440 | 8.993635e-49 | -8.615850e-47 |
| Msa0163670 | Msa1129510 | -0.801511 | 8.700464e-49 | -8.615850e-47 |
| Msa0163670 | Msa1130150 | -0.813729 | 2.208695e-51 | -8.615850e-47 |
| Msa0163670 | Msa1132880 | -0.808496 | 3.010154e-50 | -8.615850e-47 |
| Msa0163670 | Msa1136630 | 0.805932 | 1.051307e-49 | -8.615850e-47 |
| Msa0163670 | Msa1136760 | 0.809901 | 1.504807e-50 | -8.615850e-47 |
| Msa0163670 | Msa1147010 | 0.803896 | 2.800417e-49 | -8.615850e-47 |
| Msa0163670 | Msa1154060 | 0.812004 | 5.271660e-51 | -8.615850e-47 |
| Msa0163670 | Msa1156100 | -0.836455 | 9.263915e-57 | -8.615850e-47 |
| Msa0163670 | Msa1158180 | -0.802522 | 5.390432e-49 | -8.615850e-47 |
| Msa0163670 | Msa1165460 | 0.804109 | 2.529308e-49 | -8.615850e-47 |
| Msa0163670 | Msa1174280 | 0.800222 | 1.595075e-48 | -8.615850e-47 |
| Msa0163670 | Msa1185270 | 0.809540 | 1.799557e-50 | -8.615850e-47 |
| Msa0163670 | Msa1191270 | 0.828126 | 1.068786e-54 | -8.615850e-47 |
| Msa0163670 | Msa1191530 | -0.818395 | 2.004475e-52 | -8.615850e-47 |
| Msa0163670 | Msa1199540 | -0.808964 | 2.391249e-50 | -8.615850e-47 |
| Msa0163670 | Msa1203650 | 0.803182 | 3.938350e-49 | -8.615850e-47 |
| Msa0163670 | Msa1204870 | -0.803840 | 2.876730e-49 | -8.615850e-47 |
| Msa0163670 | Msa1204900 | -0.801627 | 8.236297e-49 | -8.615850e-47 |
| Msa0163670 | Msa1205120 | 0.809844 | 1.547664e-50 | -8.615850e-47 |
| Msa0163670 | Msa1211610 | 0.800319 | 1.524080e-48 | -8.615850e-47 |
| Msa0163670 | Msa1223540 | 0.807402 | 5.144042e-50 | -8.615850e-47 |
| Msa0163670 | Msa1223710 | 0.809275 | 2.050538e-50 | -8.615850e-47 |
| Msa0163670 | Msa1223960 | 0.829403 | 5.250562e-55 | -8.615850e-47 |
| Msa0163670 | Msa1223990 | 0.834012 | 3.832844e-56 | -8.615850e-47 |
| Msa0163670 | Msa1239210 | 0.802159 | 6.403073e-49 | -8.615850e-47 |
| Msa0163670 | Msa1239940 | 0.821139 | 4.733206e-53 | -8.615850e-47 |
| Msa0163670 | Msa1247200 | -0.800744 | 1.248164e-48 | -8.615850e-47 |
| Msa0163670 | Msa1256490 | -0.800290 | 1.545095e-48 | -8.615850e-47 |
| Msa0163670 | Msa1259570 | 0.810365 | 1.195301e-50 | -8.615850e-47 |
| Msa0163670 | Msa1263110 | 0.834675 | 2.613732e-56 | -8.615850e-47 |
| Msa0163670 | Msa1263520 | 0.803656 | 3.141490e-49 | -8.615850e-47 |
| Msa0163670 | Msa1268360 | 0.817673 | 2.918765e-52 | -8.615850e-47 |
| Msa0163670 | Msa1269200 | 0.806608 | 7.573524e-50 | -8.615850e-47 |
| Msa0163670 | Msa1269500 | 0.803682 | 3.102610e-49 | -8.615850e-47 |
| Msa0163670 | Msa1273320 | 0.845483 | 3.948714e-59 | -8.615850e-47 |
| Msa0163670 | Msa1279200 | -0.807224 | 5.610984e-50 | -8.615850e-47 |
| Msa0163670 | Msa1281780 | 0.802730 | 4.884590e-49 | -8.615850e-47 |
| Msa0163670 | Msa1287100 | -0.844224 | 8.628231e-59 | -8.615850e-47 |
| Msa0163670 | Msa1295210 | -0.809011 | 2.336173e-50 | -8.615850e-47 |
| Msa0163670 | Msa1303400 | 0.802345 | 5.862270e-49 | -8.615850e-47 |
| Msa0163670 | Msa1303690 | -0.804725 | 1.881826e-49 | -8.615850e-47 |
| Msa0163670 | Msa1320160 | 0.832263 | 1.044571e-55 | -8.615850e-47 |
| Msa0163670 | Msa1321010 | 0.819677 | 1.024402e-52 | -8.615850e-47 |
| Msa0163670 | Msa1328680 | -0.804544 | 2.053224e-49 | -8.615850e-47 |
| Msa0163670 | Msa1330080 | -0.800979 | 1.117872e-48 | -8.615850e-47 |
| Msa0163670 | Msa1341710 | -0.806294 | 8.820211e-50 | -8.615850e-47 |
| Msa0163670 | Msa1344450 | 0.832779 | 7.779052e-56 | -8.615850e-47 |
| Msa0163670 | Msa1363170 | -0.804567 | 2.030716e-49 | -8.615850e-47 |
| Msa0163670 | Msa1364690 | 0.816204 | 6.239874e-52 | -8.615850e-47 |
| Msa0163670 | Msa1386910 | -0.804394 | 2.206198e-49 | -8.615850e-47 |
| Msa0163670 | Msa1388720 | -0.800639 | 1.311575e-48 | -8.615850e-47 |
| Msa0163670 | Msa1398140 | 0.807739 | 4.363301e-50 | -8.615850e-47 |
| Msa0163670 | Msa1405040 | -0.810023 | 1.416278e-50 | -8.615850e-47 |
| Msa0163670 | Msa1405830 | 0.812887 | 3.380682e-51 | -8.615850e-47 |
| Msa0163670 | Msa1407040 | 0.804242 | 2.373573e-49 | -8.615850e-47 |
| Msa0163670 | Msa1407810 | 0.821680 | 3.549031e-53 | -8.615850e-47 |
| Msa0163670 | Msa1408230 | -0.809789 | 1.590732e-50 | -8.615850e-47 |
| Msa0163670 | Msa1415510 | -0.808433 | 3.104891e-50 | -8.615850e-47 |
| Msa0163670 | Msa1417220 | 0.813838 | 2.089811e-51 | -8.615850e-47 |
| Msa0163670 | Msa1424870 | 0.800328 | 1.517230e-48 | -8.615850e-47 |
| Msa0163670 | Msa1433360 | 0.811060 | 8.456611e-51 | -8.615850e-47 |
| Msa0163670 | Msa1437590 | 0.832021 | 1.198570e-55 | -8.615850e-47 |
| Msa0163670 | Msa1437780 | 0.823229 | 1.549963e-53 | -8.615850e-47 |
| Msa0163670 | Msa1455200 | 0.800284 | 1.549169e-48 | -8.615850e-47 |
| Msa0163670 | Msa1462610 | 0.828457 | 8.894388e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0163670 | MtrunA17_Chr1g0178131 | 78.947 | 95 | 20 | 0 | 1 | 95 | 1 | 95 | 3.25e-48 | 158 |
| Msa0163670 | MtrunA17_Chr7g0266771 | 67.073 | 82 | 27 | 0 | 1 | 82 | 2 | 83 | 2.40e-32 | 117 |
| Msa0163670 | MtrunA17_Chr8g0344291 | 51.250 | 80 | 38 | 1 | 16 | 94 | 4 | 83 | 3.03e-21 | 86.7 |
| Msa0163670 | MtrunA17_Chr2g0321721 | 47.436 | 78 | 41 | 0 | 17 | 94 | 6 | 83 | 3.14e-20 | 84.7 |
| Msa0163670 | MtrunA17_Chr3g0106991 | 50.602 | 83 | 38 | 2 | 15 | 94 | 5 | 87 | 5.78e-18 | 78.2 |
| Msa0163670 | MtrunA17_Chr3g0106961 | 48.810 | 84 | 40 | 2 | 14 | 94 | 4 | 87 | 1.14e-17 | 76.3 |
| Msa0163670 | MtrunA17_Chr4g0026081 | 52.632 | 76 | 36 | 0 | 19 | 94 | 24 | 99 | 7.58e-17 | 75.9 |
| Msa0163670 | MtrunA17_Chr3g0106971 | 46.753 | 77 | 39 | 2 | 15 | 89 | 5 | 81 | 6.87e-14 | 66.6 |
| Msa0163670 | MtrunA17_Chr3g0106981 | 46.053 | 76 | 39 | 2 | 16 | 89 | 6 | 81 | 7.74e-14 | 66.6 |
| Msa0163670 | MtrunA17_Chr8g0344901 | 43.023 | 86 | 45 | 3 | 16 | 97 | 4 | 89 | 1.36e-13 | 66.2 |
| Msa0163670 | MtrunA17_Chr1g0185631 | 42.500 | 80 | 44 | 2 | 11 | 90 | 4 | 81 | 3.07e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0163670 | AT3G44326.1 | 55.844 | 77 | 34 | 0 | 16 | 92 | 21 | 97 | 1.87e-24 | 97.1 |
| Msa0163670 | AT2G27310.1 | 57.143 | 77 | 33 | 0 | 15 | 91 | 11 | 87 | 2.70e-24 | 96.3 |
| Msa0163670 | AT2G36090.1 | 50.617 | 81 | 28 | 1 | 13 | 93 | 14 | 82 | 1.20e-16 | 75.5 |
Find 54 sgRNAs with CRISPR-Local
Find 54 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATCATGATTTGCATTTC+CGG | 0.272726 | 1_4:+41991368 | None:intergenic |
| TCTGTTCCGACGAACATCTC+TGG | 0.313553 | 1_4:+41991522 | Msa0163670:CDS |
| TGGAGGTGGTGCAGCGGAGT+GGG | 0.320619 | 1_4:+41991739 | Msa0163670:CDS |
| CAGACTCTATCTCTTCTCAT+AGG | 0.359020 | 1_4:+41991639 | Msa0163670:CDS |
| CTGTTTGCAACGGTGGTTTA+CGG | 0.378960 | 1_4:+41991774 | Msa0163670:CDS |
| GTGGAGGTGGTGCAGCGGAG+TGG | 0.384568 | 1_4:+41991738 | Msa0163670:CDS |
| GGAGGTGGTGCAGCGGAGTG+GGG | 0.386877 | 1_4:+41991740 | Msa0163670:CDS |
| GACTGGCAAGGCGGTGGAGG+TGG | 0.421907 | 1_4:+41991725 | Msa0163670:CDS |
| CGGAACAGAGAGAGTTGAGT+TGG | 0.450504 | 1_4:-41991508 | None:intergenic |
| CACATACTCACACGCCTTGA+CGG | 0.456412 | 1_4:+41991452 | Msa0163670:CDS |
| GGGAGGAGTTGAGGCTGAGC+TGG | 0.460888 | 1_4:+41991661 | Msa0163670:CDS |
| GTCGACTGGCAAGGCGGTGG+AGG | 0.477132 | 1_4:+41991722 | Msa0163670:CDS |
| GAGAGAGTTGAGTTGGGAGC+AGG | 0.498381 | 1_4:-41991501 | None:intergenic |
| AGACTCTATCTCTTCTCATA+GGG | 0.500015 | 1_4:+41991640 | Msa0163670:CDS |
| AAGCGAGAGCAGCGCCGTCA+AGG | 0.502843 | 1_4:-41991466 | None:intergenic |
| CGGAGAACGTTGAGATTACA+TGG | 0.505020 | 1_4:-41991595 | None:intergenic |
| TTCTCATAGGGGAGGAGTTG+AGG | 0.505954 | 1_4:+41991652 | Msa0163670:CDS |
| GGTGGTGCAGCGGAGTGGGG+AGG | 0.507878 | 1_4:+41991743 | Msa0163670:CDS |
| CGAGCGGTGAACGTGTCGAC+TGG | 0.509912 | 1_4:+41991708 | Msa0163670:CDS |
| TTCAGCCTCCTCTGATTCGC+CGG | 0.511615 | 1_4:-41991387 | None:intergenic |
| GGAACAGAGAGAGTTGAGTT+GGG | 0.512955 | 1_4:-41991507 | None:intergenic |
| CTGTTCCGACGAACATCTCT+GGG | 0.515288 | 1_4:+41991523 | Msa0163670:CDS |
| TTGCATTATGTCGTCGTGGA+CGG | 0.534628 | 1_4:-41991426 | None:intergenic |
| AACAGCGACGGCGACGGAGG+TGG | 0.537963 | 1_4:+41991800 | Msa0163670:CDS |
| TTCACCGCTCGTTGACTCAC+CGG | 0.540056 | 1_4:-41991696 | None:intergenic |
| AGGCGGTGGAGGTGGTGCAG+CGG | 0.545534 | 1_4:+41991733 | Msa0163670:CDS |
| CGTGTCGACTGGCAAGGCGG+TGG | 0.547797 | 1_4:+41991719 | Msa0163670:CDS |
| GCGAACACGTGGCGTGTTGG+TGG | 0.547964 | 1_4:-41991573 | None:intergenic |
| TTGCATTTCCGGCGAATCAG+AGG | 0.552766 | 1_4:+41991379 | Msa0163670:CDS |
| GAAGAAAGAGCGGGAGCCAT+CGG | 0.558224 | 1_4:-41991615 | None:intergenic |
| ACACGTGGCGTGTTGGTGGA+AGG | 0.562808 | 1_4:-41991569 | None:intergenic |
| GAGTTGGGAGCAGGTGCTTG+CGG | 0.574852 | 1_4:-41991492 | None:intergenic |
| CATTTCCGGCGAATCAGAGG+AGG | 0.576009 | 1_4:+41991382 | Msa0163670:CDS |
| GTCGTGGACGGCGGAGAATG+TGG | 0.582153 | 1_4:-41991414 | None:intergenic |
| AGAGTCTGCGAAGAAAGAGC+GGG | 0.584331 | 1_4:-41991624 | None:intergenic |
| CGGAGAAACAGCGACGGCGA+CGG | 0.589608 | 1_4:+41991794 | Msa0163670:CDS |
| TTGGGAGCAGGTGCTTGCGG+CGG | 0.592620 | 1_4:-41991489 | None:intergenic |
| AGAAACAGCGACGGCGACGG+AGG | 0.596172 | 1_4:+41991797 | Msa0163670:CDS |
| GGTGAAGTTGCTGTTTGCAA+CGG | 0.596822 | 1_4:+41991764 | Msa0163670:CDS |
| GGTGAACGTGTCGACTGGCA+AGG | 0.597397 | 1_4:+41991713 | Msa0163670:CDS |
| TAGAGTCTGCGAAGAAAGAG+CGG | 0.597944 | 1_4:-41991625 | None:intergenic |
| GTAATCTCAACGTTCTCCGA+TGG | 0.609849 | 1_4:+41991599 | Msa0163670:CDS |
| ATGGCGAACACGTGGCGTGT+TGG | 0.612938 | 1_4:-41991576 | None:intergenic |
| CATTATGTCGTCGTGGACGG+CGG | 0.616775 | 1_4:-41991423 | None:intergenic |
| GAAGTTGCTGTTTGCAACGG+TGG | 0.616823 | 1_4:+41991767 | Msa0163670:CDS |
| TCTATCTCTTCTCATAGGGG+AGG | 0.647985 | 1_4:+41991644 | Msa0163670:CDS |
| GTTTGCCCAGAGATGTTCGT+CGG | 0.658971 | 1_4:-41991528 | None:intergenic |
| GACTCTATCTCTTCTCATAG+GGG | 0.659257 | 1_4:+41991641 | Msa0163670:CDS |
| GAGATTACATGGCGAACACG+TGG | 0.665268 | 1_4:-41991584 | None:intergenic |
| CAAACGCATGCTATTCTACG+TGG | 0.694571 | 1_4:+41991546 | Msa0163670:CDS |
| GAGTTTGCATTATGTCGTCG+TGG | 0.722370 | 1_4:-41991430 | None:intergenic |
| CGATCCGGTGAGTCAACGAG+CGG | 0.722539 | 1_4:+41991692 | Msa0163670:CDS |
| GGTTTACGGAGAAACAGCGA+CGG | 0.737765 | 1_4:+41991788 | Msa0163670:CDS |
| GAACGTGTCGACTGGCAAGG+CGG | 0.744897 | 1_4:+41991716 | Msa0163670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AGACTCTATCTCTTCTCATA+GGG | + | chr1_4:41991640-41991659 | Msa0163670:CDS | 35.0% | |
| CAGACTCTATCTCTTCTCAT+AGG | + | chr1_4:41991639-41991658 | Msa0163670:CDS | 40.0% | |
| GACTCTATCTCTTCTCATAG+GGG | + | chr1_4:41991641-41991660 | Msa0163670:CDS | 40.0% | |
| TTGCATTATGTCGTCGTGGA+CGG | - | chr1_4:41991429-41991448 | None:intergenic | 45.0% | |
| GAGTTTGCATTATGTCGTCG+TGG | - | chr1_4:41991433-41991452 | None:intergenic | 45.0% | |
| GGAACAGAGAGAGTTGAGTT+GGG | - | chr1_4:41991510-41991529 | None:intergenic | 45.0% | |
| CAAACGCATGCTATTCTACG+TGG | + | chr1_4:41991546-41991565 | Msa0163670:CDS | 45.0% | |
| CGGAGAACGTTGAGATTACA+TGG | - | chr1_4:41991598-41991617 | None:intergenic | 45.0% | |
| GTAATCTCAACGTTCTCCGA+TGG | + | chr1_4:41991599-41991618 | Msa0163670:CDS | 45.0% | |
| TAGAGTCTGCGAAGAAAGAG+CGG | - | chr1_4:41991628-41991647 | None:intergenic | 45.0% | |
| TCTATCTCTTCTCATAGGGG+AGG | + | chr1_4:41991644-41991663 | Msa0163670:CDS | 45.0% | |
| !! | GAGCTGGATTTTGATCGATC+CGG | + | chr1_4:41991677-41991696 | Msa0163670:CDS | 45.0% |
| !! | GGTGAAGTTGCTGTTTGCAA+CGG | + | chr1_4:41991764-41991783 | Msa0163670:CDS | 45.0% |
| CTGTTTGCAACGGTGGTTTA+CGG | + | chr1_4:41991774-41991793 | Msa0163670:CDS | 45.0% | |
| TTGCATTTCCGGCGAATCAG+AGG | + | chr1_4:41991379-41991398 | Msa0163670:CDS | 50.0% | |
| CACATACTCACACGCCTTGA+CGG | + | chr1_4:41991452-41991471 | Msa0163670:CDS | 50.0% | |
| CGGAACAGAGAGAGTTGAGT+TGG | - | chr1_4:41991511-41991530 | None:intergenic | 50.0% | |
| TCTGTTCCGACGAACATCTC+TGG | + | chr1_4:41991522-41991541 | Msa0163670:CDS | 50.0% | |
| CTGTTCCGACGAACATCTCT+GGG | + | chr1_4:41991523-41991542 | Msa0163670:CDS | 50.0% | |
| GTTTGCCCAGAGATGTTCGT+CGG | - | chr1_4:41991531-41991550 | None:intergenic | 50.0% | |
| GAGATTACATGGCGAACACG+TGG | - | chr1_4:41991587-41991606 | None:intergenic | 50.0% | |
| AGAGTCTGCGAAGAAAGAGC+GGG | - | chr1_4:41991627-41991646 | None:intergenic | 50.0% | |
| TTCTCATAGGGGAGGAGTTG+AGG | + | chr1_4:41991652-41991671 | Msa0163670:CDS | 50.0% | |
| !! | GAAGTTGCTGTTTGCAACGG+TGG | + | chr1_4:41991767-41991786 | Msa0163670:CDS | 50.0% |
| GGTTTACGGAGAAACAGCGA+CGG | + | chr1_4:41991788-41991807 | Msa0163670:CDS | 50.0% | |
| CATTTCCGGCGAATCAGAGG+AGG | + | chr1_4:41991382-41991401 | Msa0163670:CDS | 55.0% | |
| ! | TTCAGCCTCCTCTGATTCGC+CGG | - | chr1_4:41991390-41991409 | None:intergenic | 55.0% |
| CATTATGTCGTCGTGGACGG+CGG | - | chr1_4:41991426-41991445 | None:intergenic | 55.0% | |
| !! | GAGAGAGTTGAGTTGGGAGC+AGG | - | chr1_4:41991504-41991523 | None:intergenic | 55.0% |
| GAAGAAAGAGCGGGAGCCAT+CGG | - | chr1_4:41991618-41991637 | None:intergenic | 55.0% | |
| !! | TTCACCGCTCGTTGACTCAC+CGG | - | chr1_4:41991699-41991718 | None:intergenic | 55.0% |
| GAGTTGGGAGCAGGTGCTTG+CGG | - | chr1_4:41991495-41991514 | None:intergenic | 60.0% | |
| ! | ACACGTGGCGTGTTGGTGGA+AGG | - | chr1_4:41991572-41991591 | None:intergenic | 60.0% |
| ATGGCGAACACGTGGCGTGT+TGG | - | chr1_4:41991579-41991598 | None:intergenic | 60.0% | |
| CGATCCGGTGAGTCAACGAG+CGG | + | chr1_4:41991692-41991711 | Msa0163670:CDS | 60.0% | |
| !! | GGTGAACGTGTCGACTGGCA+AGG | + | chr1_4:41991713-41991732 | Msa0163670:CDS | 60.0% |
| !! | GAACGTGTCGACTGGCAAGG+CGG | + | chr1_4:41991716-41991735 | Msa0163670:CDS | 60.0% |
| GTCGTGGACGGCGGAGAATG+TGG | - | chr1_4:41991417-41991436 | None:intergenic | 65.0% | |
| AAGCGAGAGCAGCGCCGTCA+AGG | - | chr1_4:41991469-41991488 | None:intergenic | 65.0% | |
| TTGGGAGCAGGTGCTTGCGG+CGG | - | chr1_4:41991492-41991511 | None:intergenic | 65.0% | |
| GCGAACACGTGGCGTGTTGG+TGG | - | chr1_4:41991576-41991595 | None:intergenic | 65.0% | |
| GGGAGGAGTTGAGGCTGAGC+TGG | + | chr1_4:41991661-41991680 | Msa0163670:CDS | 65.0% | |
| ! | CGAGCGGTGAACGTGTCGAC+TGG | + | chr1_4:41991708-41991727 | Msa0163670:CDS | 65.0% |
| TGGAGGTGGTGCAGCGGAGT+GGG | + | chr1_4:41991739-41991758 | Msa0163670:CDS | 65.0% | |
| CGGAGAAACAGCGACGGCGA+CGG | + | chr1_4:41991794-41991813 | Msa0163670:CDS | 65.0% | |
| AGAAACAGCGACGGCGACGG+AGG | + | chr1_4:41991797-41991816 | Msa0163670:CDS | 65.0% | |
| !! | CGTGTCGACTGGCAAGGCGG+TGG | + | chr1_4:41991719-41991738 | Msa0163670:CDS | 70.0% |
| GTCGACTGGCAAGGCGGTGG+AGG | + | chr1_4:41991722-41991741 | Msa0163670:CDS | 70.0% | |
| GACTGGCAAGGCGGTGGAGG+TGG | + | chr1_4:41991725-41991744 | Msa0163670:CDS | 70.0% | |
| AGGCGGTGGAGGTGGTGCAG+CGG | + | chr1_4:41991733-41991752 | Msa0163670:CDS | 70.0% | |
| GTGGAGGTGGTGCAGCGGAG+TGG | + | chr1_4:41991738-41991757 | Msa0163670:CDS | 70.0% | |
| GGAGGTGGTGCAGCGGAGTG+GGG | + | chr1_4:41991740-41991759 | Msa0163670:CDS | 70.0% | |
| AACAGCGACGGCGACGGAGG+TGG | + | chr1_4:41991800-41991819 | Msa0163670:CDS | 70.0% | |
| GGTGGTGCAGCGGAGTGGGG+AGG | + | chr1_4:41991743-41991762 | Msa0163670:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 41991374 | 41991832 | 41991374 | ID=Msa0163670;Name=Msa0163670 |
| chr1_4 | mRNA | 41991374 | 41991832 | 41991374 | ID=Msa0163670-mRNA-1;Parent=Msa0163670;Name=Msa0163670-mRNA-1;_AED=0.18;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|152 |
| chr1_4 | exon | 41991374 | 41991832 | 41991374 | ID=Msa0163670-mRNA-1:exon:12175;Parent=Msa0163670-mRNA-1 |
| chr1_4 | CDS | 41991374 | 41991832 | 41991374 | ID=Msa0163670-mRNA-1:cds;Parent=Msa0163670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
