Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0005560 | XP_003588798.2 | 98.516 | 1011 | 14 | 1 | 1 | 1010 | 1 | 1011 | 0.0 | 2070 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0005560 | sp|Q3S4A7|AHK5_ARATH | 55.902 | 1025 | 333 | 17 | 1 | 1010 | 1 | 921 | 0.0 | 1058 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0005560 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002880 | Msa0005560 | 0.804993 | 1.654424e-49 | -8.615850e-47 |
| Msa0004940 | Msa0005560 | 0.801576 | 8.435086e-49 | -8.615850e-47 |
| Msa0005560 | Msa0011010 | 0.817556 | 3.101096e-52 | -8.615850e-47 |
| Msa0005560 | Msa0011040 | 0.826143 | 3.188445e-54 | -8.615850e-47 |
| Msa0005560 | Msa0013270 | 0.829606 | 4.685904e-55 | -8.615850e-47 |
| Msa0005560 | Msa0015070 | 0.815788 | 7.725118e-52 | -8.615850e-47 |
| Msa0005560 | Msa0024650 | 0.826427 | 2.729422e-54 | -8.615850e-47 |
| Msa0005560 | Msa0025560 | 0.804403 | 2.196723e-49 | -8.615850e-47 |
| Msa0005560 | Msa0025570 | 0.840984 | 6.253935e-58 | -8.615850e-47 |
| Msa0005560 | Msa0038150 | -0.824720 | 6.927801e-54 | -8.615850e-47 |
| Msa0005560 | Msa0040930 | 0.823650 | 1.235295e-53 | -8.615850e-47 |
| Msa0005560 | Msa0045810 | 0.810543 | 1.094235e-50 | -8.615850e-47 |
| Msa0005560 | Msa0047560 | -0.837070 | 6.456653e-57 | -8.615850e-47 |
| Msa0005560 | Msa0048380 | 0.820099 | 8.204308e-53 | -8.615850e-47 |
| Msa0005560 | Msa0054050 | 0.952232 | 3.771373e-110 | -8.615850e-47 |
| Msa0005560 | Msa0062190 | 0.804468 | 2.129030e-49 | -8.615850e-47 |
| Msa0005560 | Msa0073110 | 0.837350 | 5.473131e-57 | -8.615850e-47 |
| Msa0005560 | Msa0078160 | -0.808566 | 2.908545e-50 | -8.615850e-47 |
| Msa0005560 | Msa0080100 | -0.810243 | 1.270066e-50 | -8.615850e-47 |
| Msa0005560 | Msa0081120 | -0.807569 | 4.740784e-50 | -8.615850e-47 |
| Msa0005560 | Msa0092350 | 0.816233 | 6.147078e-52 | -8.615850e-47 |
| Msa0005560 | Msa0095910 | 0.805360 | 1.386288e-49 | -8.615850e-47 |
| Msa0005560 | Msa0098380 | 0.800164 | 1.638506e-48 | -8.615850e-47 |
| Msa0005560 | Msa0099890 | 0.927963 | 5.638619e-92 | -8.615850e-47 |
| Msa0005560 | Msa0105140 | -0.802380 | 5.765802e-49 | -8.615850e-47 |
| Msa0005560 | Msa0106540 | 0.837288 | 5.677217e-57 | -8.615850e-47 |
| Msa0005560 | Msa0111780 | 0.855585 | 5.715099e-62 | -8.615850e-47 |
| Msa0005560 | Msa0120450 | 0.805039 | 1.617963e-49 | -8.615850e-47 |
| Msa0005560 | Msa0121320 | 0.828452 | 8.921078e-55 | -8.615850e-47 |
| Msa0005560 | Msa0121470 | 0.832428 | 9.506046e-56 | -8.615850e-47 |
| Msa0005560 | Msa0121490 | 0.832736 | 7.973025e-56 | -8.615850e-47 |
| Msa0005560 | Msa0132080 | -0.814918 | 1.205959e-51 | -8.615850e-47 |
| Msa0005560 | Msa0136000 | 0.804312 | 2.295037e-49 | -8.615850e-47 |
| Msa0005560 | Msa0136090 | 0.844672 | 6.538853e-59 | -8.615850e-47 |
| Msa0005560 | Msa0137010 | -0.817075 | 3.979132e-52 | -8.615850e-47 |
| Msa0005560 | Msa0140870 | -0.806963 | 6.371763e-50 | -8.615850e-47 |
| Msa0005560 | Msa0147680 | 0.824944 | 6.134232e-54 | -8.615850e-47 |
| Msa0005560 | Msa0148670 | 0.896015 | 5.533314e-76 | -8.615850e-47 |
| Msa0005560 | Msa0163690 | 0.835588 | 1.538070e-56 | -8.615850e-47 |
| Msa0005560 | Msa0166180 | 0.816150 | 6.413128e-52 | -8.615850e-47 |
| Msa0005560 | Msa0166190 | 0.803589 | 3.243387e-49 | -8.615850e-47 |
| Msa0005560 | Msa0175060 | 0.804965 | 1.676715e-49 | -8.615850e-47 |
| Msa0005560 | Msa0188560 | 0.807814 | 4.205044e-50 | -8.615850e-47 |
| Msa0005560 | Msa0192830 | 0.839627 | 1.415024e-57 | -8.615850e-47 |
| Msa0005560 | Msa0206370 | 0.869729 | 2.488600e-66 | -8.615850e-47 |
| Msa0005560 | Msa0207250 | -0.805525 | 1.279729e-49 | -8.615850e-47 |
| Msa0005560 | Msa0210790 | 0.806910 | 6.540052e-50 | -8.615850e-47 |
| Msa0005560 | Msa0210850 | 0.809652 | 1.702361e-50 | -8.615850e-47 |
| Msa0005560 | Msa0211460 | 0.826402 | 2.766236e-54 | -8.615850e-47 |
| Msa0005560 | Msa0212950 | -0.811557 | 6.596792e-51 | -8.615850e-47 |
| Msa0005560 | Msa0225280 | -0.800262 | 1.565287e-48 | -8.615850e-47 |
| Msa0005560 | Msa0230920 | 0.831442 | 1.665876e-55 | -8.615850e-47 |
| Msa0005560 | Msa0244310 | 0.856254 | 3.642688e-62 | -8.615850e-47 |
| Msa0005560 | Msa0253230 | -0.821809 | 3.314523e-53 | -8.615850e-47 |
| Msa0005560 | Msa0260980 | 0.823399 | 1.414108e-53 | -8.615850e-47 |
| Msa0005560 | Msa0261020 | -0.808580 | 2.888680e-50 | -8.615850e-47 |
| Msa0005560 | Msa0266330 | -0.807723 | 4.397503e-50 | -8.615850e-47 |
| Msa0005560 | Msa0267510 | -0.802521 | 5.394138e-49 | -8.615850e-47 |
| Msa0005560 | Msa0273360 | 0.805177 | 1.514170e-49 | -8.615850e-47 |
| Msa0005560 | Msa0278940 | 0.810616 | 1.054932e-50 | -8.615850e-47 |
| Msa0005560 | Msa0279810 | 0.826026 | 3.398982e-54 | -8.615850e-47 |
| Msa0005560 | Msa0282830 | 0.844872 | 5.774991e-59 | -8.615850e-47 |
| Msa0005560 | Msa0307630 | 0.824781 | 6.702310e-54 | -8.615850e-47 |
| Msa0005560 | Msa0319220 | 0.822134 | 2.786255e-53 | -8.615850e-47 |
| Msa0005560 | Msa0321240 | 0.824030 | 1.006458e-53 | -8.615850e-47 |
| Msa0005560 | Msa0336430 | 0.854082 | 1.559538e-61 | -8.615850e-47 |
| Msa0005560 | Msa0336460 | 0.859058 | 5.376396e-63 | -8.615850e-47 |
| Msa0005560 | Msa0336520 | 0.845829 | 3.181626e-59 | -8.615850e-47 |
| Msa0005560 | Msa0341950 | -0.807093 | 5.981635e-50 | -8.615850e-47 |
| Msa0005560 | Msa0346170 | 0.809285 | 2.041207e-50 | -8.615850e-47 |
| Msa0005560 | Msa0349930 | 0.804982 | 1.662977e-49 | -8.615850e-47 |
| Msa0005560 | Msa0354600 | 0.815568 | 8.649018e-52 | -8.615850e-47 |
| Msa0005560 | Msa0356270 | 0.814445 | 1.535477e-51 | -8.615850e-47 |
| Msa0005560 | Msa0357470 | 0.845631 | 3.601214e-59 | -8.615850e-47 |
| Msa0005560 | Msa0357510 | 0.848251 | 6.904928e-60 | -8.615850e-47 |
| Msa0005560 | Msa0357530 | 0.850975 | 1.199056e-60 | -8.615850e-47 |
| Msa0005560 | Msa0357550 | 0.849553 | 3.003931e-60 | -8.615850e-47 |
| Msa0005560 | Msa0357560 | 0.849531 | 3.045541e-60 | -8.615850e-47 |
| Msa0005560 | Msa0370620 | 0.800133 | 1.662559e-48 | -8.615850e-47 |
| Msa0005560 | Msa0371350 | -0.805111 | 1.562806e-49 | -8.615850e-47 |
| Msa0005560 | Msa0374470 | 0.815341 | 9.713235e-52 | -8.615850e-47 |
| Msa0005560 | Msa0374600 | 0.815335 | 9.746540e-52 | -8.615850e-47 |
| Msa0005560 | Msa0379480 | 0.822165 | 2.740290e-53 | -8.615850e-47 |
| Msa0005560 | Msa0386910 | 0.843093 | 1.732041e-58 | -8.615850e-47 |
| Msa0005560 | Msa0391600 | 0.837033 | 6.598062e-57 | -8.615850e-47 |
| Msa0005560 | Msa0393820 | 0.841073 | 5.925903e-58 | -8.615850e-47 |
| Msa0005560 | Msa0396860 | 0.819367 | 1.205339e-52 | -8.615850e-47 |
| Msa0005560 | Msa0404140 | 0.814530 | 1.469958e-51 | -8.615850e-47 |
| Msa0005560 | Msa0415010 | 0.807112 | 5.925945e-50 | -8.615850e-47 |
| Msa0005560 | Msa0423200 | 0.800802 | 1.214950e-48 | -8.615850e-47 |
| Msa0005560 | Msa0423220 | 0.819536 | 1.103124e-52 | -8.615850e-47 |
| Msa0005560 | Msa0423630 | 0.831521 | 1.592956e-55 | -8.615850e-47 |
| Msa0005560 | Msa0433090 | 0.809451 | 1.880225e-50 | -8.615850e-47 |
| Msa0005560 | Msa0464310 | 0.800622 | 1.321679e-48 | -8.615850e-47 |
| Msa0005560 | Msa0471130 | -0.812079 | 5.076926e-51 | -8.615850e-47 |
| Msa0005560 | Msa0474660 | -0.815751 | 7.874850e-52 | -8.615850e-47 |
| Msa0005560 | Msa0480900 | -0.806209 | 9.194613e-50 | -8.615850e-47 |
| Msa0005560 | Msa0481670 | 0.806089 | 9.744062e-50 | -8.615850e-47 |
| Msa0005560 | Msa0492330 | -0.800006 | 1.764787e-48 | -8.615850e-47 |
| Msa0005560 | Msa0523720 | 0.843437 | 1.402411e-58 | -8.615850e-47 |
| Msa0005560 | Msa0524710 | 0.818458 | 1.939932e-52 | -8.615850e-47 |
| Msa0005560 | Msa0525400 | 0.819805 | 9.578837e-53 | -8.615850e-47 |
| Msa0005560 | Msa0530660 | 0.833113 | 6.426885e-56 | -8.615850e-47 |
| Msa0005560 | Msa0540640 | 0.829095 | 6.235695e-55 | -8.615850e-47 |
| Msa0005560 | Msa0545680 | 0.802153 | 6.420958e-49 | -8.615850e-47 |
| Msa0005560 | Msa0557240 | 0.810175 | 1.313547e-50 | -8.615850e-47 |
| Msa0005560 | Msa0561830 | 0.836339 | 9.914700e-57 | -8.615850e-47 |
| Msa0005560 | Msa0566090 | -0.804563 | 2.034114e-49 | -8.615850e-47 |
| Msa0005560 | Msa0567330 | 0.849344 | 3.434271e-60 | -8.615850e-47 |
| Msa0005560 | Msa0567570 | 0.857047 | 2.129682e-62 | -8.615850e-47 |
| Msa0005560 | Msa0576320 | 0.840745 | 7.225661e-58 | -8.615850e-47 |
| Msa0005560 | Msa0583270 | -0.802510 | 5.421772e-49 | -8.615850e-47 |
| Msa0005560 | Msa0587180 | 0.835686 | 1.452216e-56 | -8.615850e-47 |
| Msa0005560 | Msa0587730 | 0.804657 | 1.944621e-49 | -8.615850e-47 |
| Msa0005560 | Msa0587930 | 0.810019 | 1.419064e-50 | -8.615850e-47 |
| Msa0005560 | Msa0597800 | 0.828242 | 1.002315e-54 | -8.615850e-47 |
| Msa0005560 | Msa0597820 | 0.823894 | 1.083372e-53 | -8.615850e-47 |
| Msa0005560 | Msa0602050 | 0.825527 | 4.464283e-54 | -8.615850e-47 |
| Msa0005560 | Msa0604200 | 0.804409 | 2.190921e-49 | -8.615850e-47 |
| Msa0005560 | Msa0604280 | 0.811984 | 5.324986e-51 | -8.615850e-47 |
| Msa0005560 | Msa0606600 | 0.811137 | 8.137343e-51 | -8.615850e-47 |
| Msa0005560 | Msa0606820 | 0.801298 | 9.619999e-49 | -8.615850e-47 |
| Msa0005560 | Msa0610190 | 0.806501 | 7.977811e-50 | -8.615850e-47 |
| Msa0005560 | Msa0614960 | 0.821419 | 4.078047e-53 | -8.615850e-47 |
| Msa0005560 | Msa0616010 | 0.802619 | 5.148307e-49 | -8.615850e-47 |
| Msa0005560 | Msa0622450 | -0.800425 | 1.449993e-48 | -8.615850e-47 |
| Msa0005560 | Msa0623310 | 0.808065 | 3.719822e-50 | -8.615850e-47 |
| Msa0005560 | Msa0626980 | 0.837639 | 4.616735e-57 | -8.615850e-47 |
| Msa0005560 | Msa0627360 | 0.835526 | 1.594588e-56 | -8.615850e-47 |
| Msa0005560 | Msa0629160 | 0.811168 | 8.011373e-51 | -8.615850e-47 |
| Msa0005560 | Msa0637590 | 0.804557 | 2.040577e-49 | -8.615850e-47 |
| Msa0005560 | Msa0637700 | 0.816904 | 4.348816e-52 | -8.615850e-47 |
| Msa0005560 | Msa0646230 | 0.828233 | 1.007391e-54 | -8.615850e-47 |
| Msa0005560 | Msa0647300 | 0.816346 | 5.796992e-52 | -8.615850e-47 |
| Msa0005560 | Msa0655370 | 0.839541 | 1.489463e-57 | -8.615850e-47 |
| Msa0005560 | Msa0673940 | 0.839249 | 1.774314e-57 | -8.615850e-47 |
| Msa0005560 | Msa0677250 | -0.801796 | 7.604723e-49 | -8.615850e-47 |
| Msa0005560 | Msa0680460 | 0.801799 | 7.592046e-49 | -8.615850e-47 |
| Msa0005560 | Msa0684030 | -0.801767 | 7.707197e-49 | -8.615850e-47 |
| Msa0005560 | Msa0685390 | -0.808742 | 2.667110e-50 | -8.615850e-47 |
| Msa0005560 | Msa0686040 | 0.814287 | 1.664020e-51 | -8.615850e-47 |
| Msa0005560 | Msa0686830 | 0.819766 | 9.777185e-53 | -8.615850e-47 |
| Msa0005560 | Msa0689840 | 0.800722 | 1.261558e-48 | -8.615850e-47 |
| Msa0005560 | Msa0699170 | 0.841715 | 4.016245e-58 | -8.615850e-47 |
| Msa0005560 | Msa0707330 | 0.819699 | 1.012450e-52 | -8.615850e-47 |
| Msa0005560 | Msa0708020 | 0.808737 | 2.673290e-50 | -8.615850e-47 |
| Msa0005560 | Msa0711860 | -0.804126 | 2.509343e-49 | -8.615850e-47 |
| Msa0005560 | Msa0714230 | -0.801702 | 7.949168e-49 | -8.615850e-47 |
| Msa0005560 | Msa0716980 | 0.821235 | 4.497277e-53 | -8.615850e-47 |
| Msa0005560 | Msa0717030 | 0.809035 | 2.309060e-50 | -8.615850e-47 |
| Msa0005560 | Msa0733560 | 0.809025 | 2.320186e-50 | -8.615850e-47 |
| Msa0005560 | Msa0750790 | 0.815836 | 7.538105e-52 | -8.615850e-47 |
| Msa0005560 | Msa0755550 | -0.800649 | 1.305340e-48 | -8.615850e-47 |
| Msa0005560 | Msa0761830 | 0.814781 | 1.293464e-51 | -8.615850e-47 |
| Msa0005560 | Msa0774660 | 0.848748 | 5.028170e-60 | -8.615850e-47 |
| Msa0005560 | Msa0786600 | -0.801451 | 8.948400e-49 | -8.615850e-47 |
| Msa0005560 | Msa0788160 | -0.802138 | 6.467389e-49 | -8.615850e-47 |
| Msa0005560 | Msa0790650 | -0.804150 | 2.479858e-49 | -8.615850e-47 |
| Msa0005560 | Msa0791950 | 0.803147 | 4.005118e-49 | -8.615850e-47 |
| Msa0005560 | Msa0792410 | 0.827013 | 1.977569e-54 | -8.615850e-47 |
| Msa0005560 | Msa0799110 | 0.808032 | 3.779425e-50 | -8.615850e-47 |
| Msa0005560 | Msa0801920 | -0.807652 | 4.552559e-50 | -8.615850e-47 |
| Msa0005560 | Msa0802600 | 0.800307 | 1.532787e-48 | -8.615850e-47 |
| Msa0005560 | Msa0804170 | 0.820346 | 7.201866e-53 | -8.615850e-47 |
| Msa0005560 | Msa0812220 | 0.804047 | 2.605586e-49 | -8.615850e-47 |
| Msa0005560 | Msa0813610 | 0.811933 | 5.462711e-51 | -8.615850e-47 |
| Msa0005560 | Msa0822680 | -0.803084 | 4.126203e-49 | -8.615850e-47 |
| Msa0005560 | Msa0827340 | -0.822012 | 2.974436e-53 | -8.615850e-47 |
| Msa0005560 | Msa0828350 | 0.813709 | 2.231014e-51 | -8.615850e-47 |
| Msa0005560 | Msa0829990 | 0.814735 | 1.324324e-51 | -8.615850e-47 |
| Msa0005560 | Msa0838120 | -0.807271 | 5.483269e-50 | -8.615850e-47 |
| Msa0005560 | Msa0854230 | 0.810318 | 1.223727e-50 | -8.615850e-47 |
| Msa0005560 | Msa0871420 | 0.818102 | 2.335913e-52 | -8.615850e-47 |
| Msa0005560 | Msa0880850 | 0.815307 | 9.883576e-52 | -8.615850e-47 |
| Msa0005560 | Msa0880910 | 0.814244 | 1.700365e-51 | -8.615850e-47 |
| Msa0005560 | Msa0903020 | 0.814828 | 1.263082e-51 | -8.615850e-47 |
| Msa0005560 | Msa0904590 | 0.817756 | 2.796187e-52 | -8.615850e-47 |
| Msa0005560 | Msa0935840 | -0.808132 | 3.598702e-50 | -8.615850e-47 |
| Msa0005560 | Msa0936630 | 0.835458 | 1.658753e-56 | -8.615850e-47 |
| Msa0005560 | Msa0941150 | -0.807415 | 5.111735e-50 | -8.615850e-47 |
| Msa0005560 | Msa0941420 | -0.800128 | 1.666273e-48 | -8.615850e-47 |
| Msa0005560 | Msa0964400 | -0.834374 | 3.110249e-56 | -8.615850e-47 |
| Msa0005560 | Msa0967780 | 0.812038 | 5.182575e-51 | -8.615850e-47 |
| Msa0005560 | Msa0968990 | 0.801596 | 8.357014e-49 | -8.615850e-47 |
| Msa0005560 | Msa0973010 | -0.830050 | 3.651938e-55 | -8.615850e-47 |
| Msa0005560 | Msa0993710 | 0.815197 | 1.046062e-51 | -8.615850e-47 |
| Msa0005560 | Msa1002550 | -0.802610 | 5.170477e-49 | -8.615850e-47 |
| Msa0005560 | Msa1015560 | 0.803095 | 4.104694e-49 | -8.615850e-47 |
| Msa0005560 | Msa1028890 | -0.811487 | 6.830504e-51 | -8.615850e-47 |
| Msa0005560 | Msa1029860 | 0.830930 | 2.224906e-55 | -8.615850e-47 |
| Msa0005560 | Msa1031060 | 0.826066 | 3.326641e-54 | -8.615850e-47 |
| Msa0005560 | Msa1035050 | 0.817152 | 3.824357e-52 | -8.615850e-47 |
| Msa0005560 | Msa1036260 | -0.807653 | 4.549402e-50 | -8.615850e-47 |
| Msa0005560 | Msa1038860 | 0.816628 | 5.013698e-52 | -8.615850e-47 |
| Msa0005560 | Msa1041060 | 0.819361 | 1.209268e-52 | -8.615850e-47 |
| Msa0005560 | Msa1042300 | 0.811083 | 8.360695e-51 | -8.615850e-47 |
| Msa0005560 | Msa1058550 | -0.801547 | 8.550850e-49 | -8.615850e-47 |
| Msa0005560 | Msa1062290 | 0.802870 | 4.568178e-49 | -8.615850e-47 |
| Msa0005560 | Msa1066150 | 0.830191 | 3.374851e-55 | -8.615850e-47 |
| Msa0005560 | Msa1068010 | -0.806302 | 8.789128e-50 | -8.615850e-47 |
| Msa0005560 | Msa1068730 | 0.815694 | 8.105840e-52 | -8.615850e-47 |
| Msa0005560 | Msa1068780 | 0.805999 | 1.017559e-49 | -8.615850e-47 |
| Msa0005560 | Msa1075090 | 0.814193 | 1.744805e-51 | -8.615850e-47 |
| Msa0005560 | Msa1078120 | -0.826410 | 2.754117e-54 | -8.615850e-47 |
| Msa0005560 | Msa1085820 | 0.814859 | 1.242883e-51 | -8.615850e-47 |
| Msa0005560 | Msa1103450 | 0.841440 | 4.746942e-58 | -8.615850e-47 |
| Msa0005560 | Msa1107220 | 0.828624 | 8.105560e-55 | -8.615850e-47 |
| Msa0005560 | Msa1107520 | 0.805715 | 1.167811e-49 | -8.615850e-47 |
| Msa0005560 | Msa1108560 | 0.820780 | 5.723386e-53 | -8.615850e-47 |
| Msa0005560 | Msa1119670 | 0.833226 | 6.021509e-56 | -8.615850e-47 |
| Msa0005560 | Msa1120960 | 0.837129 | 6.235513e-57 | -8.615850e-47 |
| Msa0005560 | Msa1124220 | 0.804806 | 1.809662e-49 | -8.615850e-47 |
| Msa0005560 | Msa1127200 | 0.810680 | 1.021956e-50 | -8.615850e-47 |
| Msa0005560 | Msa1129880 | -0.805889 | 1.073355e-49 | -8.615850e-47 |
| Msa0005560 | Msa1136630 | 0.809792 | 1.588387e-50 | -8.615850e-47 |
| Msa0005560 | Msa1136690 | 0.803972 | 2.700525e-49 | -8.615850e-47 |
| Msa0005560 | Msa1147010 | 0.834027 | 3.799885e-56 | -8.615850e-47 |
| Msa0005560 | Msa1149910 | 0.819238 | 1.290173e-52 | -8.615850e-47 |
| Msa0005560 | Msa1154060 | 0.814644 | 1.386834e-51 | -8.615850e-47 |
| Msa0005560 | Msa1156100 | -0.805676 | 1.190127e-49 | -8.615850e-47 |
| Msa0005560 | Msa1156430 | -0.803620 | 3.195690e-49 | -8.615850e-47 |
| Msa0005560 | Msa1156740 | 0.811298 | 7.506926e-51 | -8.615850e-47 |
| Msa0005560 | Msa1160540 | 0.810380 | 1.186304e-50 | -8.615850e-47 |
| Msa0005560 | Msa1165460 | 0.815875 | 7.387641e-52 | -8.615850e-47 |
| Msa0005560 | Msa1183870 | 0.831998 | 1.214365e-55 | -8.615850e-47 |
| Msa0005560 | Msa1186150 | 0.812488 | 4.135053e-51 | -8.615850e-47 |
| Msa0005560 | Msa1186430 | 0.819228 | 1.296991e-52 | -8.615850e-47 |
| Msa0005560 | Msa1191270 | 0.845321 | 4.368274e-59 | -8.615850e-47 |
| Msa0005560 | Msa1191530 | -0.822879 | 1.870704e-53 | -8.615850e-47 |
| Msa0005560 | Msa1192360 | 0.826685 | 2.369287e-54 | -8.615850e-47 |
| Msa0005560 | Msa1201760 | 0.814027 | 1.898990e-51 | -8.615850e-47 |
| Msa0005560 | Msa1203320 | -0.802845 | 4.623419e-49 | -8.615850e-47 |
| Msa0005560 | Msa1208050 | 0.821468 | 3.974203e-53 | -8.615850e-47 |
| Msa0005560 | Msa1208140 | 0.808441 | 3.092507e-50 | -8.615850e-47 |
| Msa0005560 | Msa1217890 | 0.852119 | 5.690797e-61 | -8.615850e-47 |
| Msa0005560 | Msa1220720 | 0.838493 | 2.783037e-57 | -8.615850e-47 |
| Msa0005560 | Msa1223540 | 0.832892 | 7.291585e-56 | -8.615850e-47 |
| Msa0005560 | Msa1223620 | 0.821183 | 4.622471e-53 | -8.615850e-47 |
| Msa0005560 | Msa1223710 | 0.813352 | 2.673704e-51 | -8.615850e-47 |
| Msa0005560 | Msa1223960 | 0.827769 | 1.303060e-54 | -8.615850e-47 |
| Msa0005560 | Msa1223990 | 0.822925 | 1.824827e-53 | -8.615850e-47 |
| Msa0005560 | Msa1240710 | 0.814454 | 1.527788e-51 | -8.615850e-47 |
| Msa0005560 | Msa1241960 | 0.800218 | 1.597635e-48 | -8.615850e-47 |
| Msa0005560 | Msa1246830 | 0.824037 | 1.002566e-53 | -8.615850e-47 |
| Msa0005560 | Msa1255710 | 0.831280 | 1.825779e-55 | -8.615850e-47 |
| Msa0005560 | Msa1259570 | 0.801994 | 6.923652e-49 | -8.615850e-47 |
| Msa0005560 | Msa1262650 | 0.811605 | 6.440988e-51 | -8.615850e-47 |
| Msa0005560 | Msa1263110 | 0.829116 | 6.164105e-55 | -8.615850e-47 |
| Msa0005560 | Msa1263520 | 0.829904 | 3.964902e-55 | -8.615850e-47 |
| Msa0005560 | Msa1265570 | 0.842548 | 2.418180e-58 | -8.615850e-47 |
| Msa0005560 | Msa1265940 | 0.813697 | 2.244741e-51 | -8.615850e-47 |
| Msa0005560 | Msa1271960 | 0.805678 | 1.188598e-49 | -8.615850e-47 |
| Msa0005560 | Msa1273320 | 0.859458 | 4.078474e-63 | -8.615850e-47 |
| Msa0005560 | Msa1281780 | 0.805316 | 1.416037e-49 | -8.615850e-47 |
| Msa0005560 | Msa1286860 | -0.808852 | 2.526410e-50 | -8.615850e-47 |
| Msa0005560 | Msa1287100 | -0.824363 | 8.405631e-54 | -8.615850e-47 |
| Msa0005560 | Msa1288070 | 0.839371 | 1.649112e-57 | -8.615850e-47 |
| Msa0005560 | Msa1294770 | 0.811709 | 6.113018e-51 | -8.615850e-47 |
| Msa0005560 | Msa1295210 | -0.814128 | 1.803353e-51 | -8.615850e-47 |
| Msa0005560 | Msa1295480 | -0.801795 | 7.608743e-49 | -8.615850e-47 |
| Msa0005560 | Msa1296490 | 0.800356 | 1.497382e-48 | -8.615850e-47 |
| Msa0005560 | Msa1300570 | 0.827893 | 1.216619e-54 | -8.615850e-47 |
| Msa0005560 | Msa1309390 | 0.810322 | 1.220795e-50 | -8.615850e-47 |
| Msa0005560 | Msa1320160 | 0.819399 | 1.185465e-52 | -8.615850e-47 |
| Msa0005560 | Msa1321010 | 0.813502 | 2.477994e-51 | -8.615850e-47 |
| Msa0005560 | Msa1328280 | 0.828584 | 8.290389e-55 | -8.615850e-47 |
| Msa0005560 | Msa1334670 | 0.843241 | 1.581881e-58 | -8.615850e-47 |
| Msa0005560 | Msa1338510 | 0.805111 | 1.563167e-49 | -8.615850e-47 |
| Msa0005560 | Msa1344450 | 0.825375 | 4.850837e-54 | -8.615850e-47 |
| Msa0005560 | Msa1349420 | 0.812699 | 3.716828e-51 | -8.615850e-47 |
| Msa0005560 | Msa1357840 | 0.803491 | 3.398806e-49 | -8.615850e-47 |
| Msa0005560 | Msa1361980 | 0.806054 | 9.912032e-50 | -8.615850e-47 |
| Msa0005560 | Msa1362590 | 0.806303 | 8.780774e-50 | -8.615850e-47 |
| Msa0005560 | Msa1364690 | 0.811492 | 6.812759e-51 | -8.615850e-47 |
| Msa0005560 | Msa1365230 | 0.839898 | 1.202859e-57 | -8.615850e-47 |
| Msa0005560 | Msa1368420 | 0.839769 | 1.299635e-57 | -8.615850e-47 |
| Msa0005560 | Msa1371800 | 0.809649 | 1.704995e-50 | -8.615850e-47 |
| Msa0005560 | Msa1377190 | 0.808264 | 3.372492e-50 | -8.615850e-47 |
| Msa0005560 | Msa1379270 | -0.811593 | 6.478947e-51 | -8.615850e-47 |
| Msa0005560 | Msa1383220 | 0.839064 | 1.981166e-57 | -8.615850e-47 |
| Msa0005560 | Msa1405040 | -0.809309 | 2.016249e-50 | -8.615850e-47 |
| Msa0005560 | Msa1405830 | 0.836183 | 1.086392e-56 | -8.615850e-47 |
| Msa0005560 | Msa1407810 | 0.854511 | 1.172529e-61 | -8.615850e-47 |
| Msa0005560 | Msa1413020 | 0.820718 | 5.916147e-53 | -8.615850e-47 |
| Msa0005560 | Msa1417220 | 0.825586 | 4.323843e-54 | -8.615850e-47 |
| Msa0005560 | Msa1431020 | 0.811612 | 6.417798e-51 | -8.615850e-47 |
| Msa0005560 | Msa1433360 | 0.832566 | 8.785756e-56 | -8.615850e-47 |
| Msa0005560 | Msa1437590 | 0.817947 | 2.531855e-52 | -8.615850e-47 |
| Msa0005560 | Msa1437780 | 0.854873 | 9.206741e-62 | -8.615850e-47 |
| Msa0005560 | Msa1438510 | 0.834211 | 3.417844e-56 | -8.615850e-47 |
| Msa0005560 | Msa1452560 | -0.819265 | 1.271749e-52 | -8.615850e-47 |
| Msa0005560 | Msa1455360 | 0.823542 | 1.309795e-53 | -8.615850e-47 |
| Msa0005560 | Msa1458270 | 0.806817 | 6.843052e-50 | -8.615850e-47 |
| Msa0005560 | Msa1461660 | 0.825238 | 5.225716e-54 | -8.615850e-47 |
| Msa0005560 | Msa1462610 | 0.824483 | 7.878066e-54 | -8.615850e-47 |
| Msa0005560 | Msa1463640 | 0.817710 | 2.863831e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0005560 | MtrunA17_Chr1g0150511 | 98.516 | 1011 | 14 | 1 | 1 | 1010 | 1 | 1011 | 0.0 | 2070 |
| Msa0005560 | MtrunA17_Chr3g0136601 | 68.830 | 1017 | 239 | 14 | 5 | 1011 | 1 | 949 | 0.0 | 1355 |
| Msa0005560 | MtrunA17_Chr1g0150531 | 82.707 | 399 | 58 | 3 | 43 | 441 | 2 | 389 | 0.0 | 656 |
| Msa0005560 | MtrunA17_Chr3g0122391 | 35.535 | 318 | 170 | 7 | 379 | 695 | 443 | 726 | 1.13e-41 | 166 |
| Msa0005560 | MtrunA17_Chr3g0122391 | 32.639 | 144 | 77 | 3 | 869 | 1011 | 901 | 1025 | 4.10e-13 | 73.9 |
| Msa0005560 | MtrunA17_Chr8g0377481 | 34.323 | 303 | 162 | 6 | 379 | 680 | 395 | 661 | 3.90e-38 | 154 |
| Msa0005560 | MtrunA17_Chr8g0392301 | 34.603 | 315 | 179 | 8 | 379 | 686 | 386 | 680 | 6.73e-38 | 154 |
| Msa0005560 | MtrunA17_Chr8g0392301 | 32.934 | 167 | 96 | 4 | 846 | 1011 | 844 | 995 | 1.92e-16 | 84.7 |
| Msa0005560 | MtrunA17_Chr5g0447641 | 32.237 | 304 | 173 | 6 | 379 | 680 | 620 | 892 | 5.02e-35 | 145 |
| Msa0005560 | MtrunA17_Chr5g0447641 | 31.429 | 140 | 89 | 2 | 858 | 996 | 1065 | 1198 | 2.01e-12 | 71.6 |
| Msa0005560 | MtrunA17_Chr4g0013831 | 38.095 | 147 | 88 | 2 | 380 | 524 | 348 | 493 | 4.17e-24 | 108 |
| Msa0005560 | MtrunA17_Chr8g0371601 | 28.000 | 300 | 167 | 6 | 379 | 676 | 474 | 726 | 4.32e-24 | 109 |
| Msa0005560 | MtrunA17_Chr8g0371601 | 28.346 | 254 | 124 | 8 | 773 | 1004 | 942 | 1159 | 2.13e-11 | 68.6 |
| Msa0005560 | MtrunA17_Chr5g0405701 | 29.085 | 306 | 168 | 6 | 379 | 682 | 512 | 770 | 5.67e-24 | 109 |
| Msa0005560 | MtrunA17_Chr5g0405701 | 29.592 | 196 | 82 | 4 | 832 | 999 | 1018 | 1185 | 7.27e-11 | 66.6 |
| Msa0005560 | MtrunA17_Chr7g0269631 | 37.226 | 137 | 83 | 2 | 380 | 514 | 348 | 483 | 3.67e-17 | 86.7 |
| Msa0005560 | MtrunA17_Chr7g0269631 | 34.559 | 136 | 83 | 3 | 585 | 717 | 484 | 616 | 1.73e-13 | 74.7 |
| Msa0005560 | MtrunA17_Chr1g0197591 | 25.956 | 366 | 204 | 12 | 328 | 680 | 337 | 648 | 8.51e-16 | 82.8 |
| Msa0005560 | MtrunA17_Chr1g0194741 | 25.839 | 298 | 160 | 10 | 381 | 662 | 400 | 652 | 2.80e-12 | 70.9 |
| Msa0005560 | MtrunA17_Chr1g0190021 | 25.641 | 195 | 131 | 4 | 337 | 521 | 327 | 517 | 3.75e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0005560 | AT5G10720.1 | 55.902 | 1025 | 333 | 17 | 1 | 1010 | 1 | 921 | 0.0 | 1058 |
| Msa0005560 | AT5G10680.2 | 50.581 | 172 | 72 | 4 | 5 | 174 | 1 | 161 | 8.27e-41 | 150 |
| Msa0005560 | AT5G10680.1 | 50.581 | 172 | 72 | 4 | 5 | 174 | 1 | 161 | 8.27e-41 | 150 |
| Msa0005560 | AT2G01830.2 | 33.333 | 309 | 170 | 6 | 379 | 680 | 475 | 754 | 1.79e-37 | 153 |
| Msa0005560 | AT2G01830.2 | 32.558 | 129 | 68 | 3 | 869 | 996 | 947 | 1057 | 2.93e-11 | 68.6 |
| Msa0005560 | AT2G01830.1 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.07e-37 | 152 |
| Msa0005560 | AT2G01830.1 | 32.558 | 129 | 68 | 3 | 869 | 996 | 924 | 1034 | 2.76e-11 | 68.6 |
| Msa0005560 | AT2G01830.4 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.07e-37 | 152 |
| Msa0005560 | AT2G01830.4 | 32.558 | 129 | 68 | 3 | 869 | 996 | 924 | 1034 | 2.76e-11 | 68.6 |
| Msa0005560 | AT2G01830.6 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.07e-37 | 152 |
| Msa0005560 | AT2G01830.6 | 32.558 | 129 | 68 | 3 | 869 | 996 | 924 | 1034 | 2.76e-11 | 68.6 |
| Msa0005560 | AT2G01830.3 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.07e-37 | 152 |
| Msa0005560 | AT2G01830.3 | 32.558 | 129 | 68 | 3 | 869 | 996 | 924 | 1034 | 2.76e-11 | 68.6 |
| Msa0005560 | AT2G01830.5 | 33.333 | 309 | 170 | 6 | 379 | 680 | 464 | 743 | 2.40e-37 | 152 |
| Msa0005560 | AT2G01830.5 | 32.558 | 129 | 68 | 3 | 869 | 996 | 936 | 1046 | 2.78e-11 | 68.6 |
| Msa0005560 | AT1G27320.1 | 33.993 | 303 | 161 | 6 | 379 | 680 | 453 | 717 | 4.07e-37 | 152 |
| Msa0005560 | AT1G27320.1 | 33.083 | 133 | 82 | 3 | 865 | 996 | 888 | 1014 | 5.98e-13 | 73.9 |
| Msa0005560 | AT5G35750.1 | 33.550 | 307 | 164 | 6 | 379 | 680 | 590 | 861 | 8.02e-34 | 141 |
| Msa0005560 | AT5G35750.1 | 33.333 | 129 | 79 | 3 | 869 | 996 | 1037 | 1159 | 3.02e-12 | 71.6 |
| Msa0005560 | AT2G17820.1 | 25.000 | 396 | 226 | 11 | 309 | 697 | 443 | 774 | 2.99e-25 | 114 |
| Msa0005560 | AT1G66340.1 | 37.584 | 149 | 91 | 2 | 372 | 518 | 338 | 486 | 9.10e-23 | 105 |
| Msa0005560 | AT2G47430.1 | 27.536 | 345 | 194 | 12 | 347 | 680 | 366 | 665 | 4.27e-19 | 94.0 |
| Msa0005560 | AT2G40940.1 | 29.545 | 220 | 121 | 6 | 338 | 524 | 282 | 500 | 1.78e-16 | 84.7 |
Find 179 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATGCACCTGTTGTTAT+TGG | 0.158249 | 1_1:-8213248 | Msa0005560:CDS |
| AACTTTCCTGCTTAGTTTCT+AGG | 0.181316 | 1_1:+8209755 | None:intergenic |
| GAGATAAGATCGCCACTTTC+TGG | 0.209695 | 1_1:-8211886 | Msa0005560:CDS |
| TTGGTGAGATTCTTCTTCTT+TGG | 0.219070 | 1_1:+8210893 | None:intergenic |
| GGAAGTTGAGCAAAGAAAAT+TGG | 0.237386 | 1_1:-8213630 | Msa0005560:CDS |
| TTGATCACATCTCATACTTC+TGG | 0.237521 | 1_1:+8210803 | None:intergenic |
| TTTGGAACAGGTTGAATTAA+TGG | 0.245842 | 1_1:-8210151 | Msa0005560:intron |
| CATTGTTAAACGCATGATTC+TGG | 0.255787 | 1_1:+8210742 | None:intergenic |
| ACTGGTCTTCTGTGACCTTT+TGG | 0.259087 | 1_1:+8210874 | None:intergenic |
| TAAAGAGCAAAGACAGCTTT+TGG | 0.270075 | 1_1:-8211821 | Msa0005560:CDS |
| CTTACAAATTATACAGATAA+AGG | 0.272256 | 1_1:-8213755 | Msa0005560:CDS |
| AAAGTTATTTCCTTCTTTGC+AGG | 0.284917 | 1_1:+8212353 | None:intergenic |
| CATGTTATCTTCAGGAGATT+TGG | 0.286514 | 1_1:-8211794 | Msa0005560:CDS |
| AACATATCTTGGTCTCTTCC+TGG | 0.287184 | 1_1:+8213836 | None:intergenic |
| AATAAAACCATTCACATTAC+AGG | 0.292769 | 1_1:-8212056 | Msa0005560:intron |
| CCAATTCCAACCACGAACTT+TGG | 0.307599 | 1_1:-8209974 | Msa0005560:CDS |
| CAAACGTCCAGTTTCGATAT+TGG | 0.310025 | 1_1:-8213555 | Msa0005560:CDS |
| TCTTTGGCAAATGCTGGTTC+TGG | 0.312428 | 1_1:+8210909 | None:intergenic |
| GCAGACCATGCTCGAAAATA+TGG | 0.317830 | 1_1:-8210421 | Msa0005560:CDS |
| AACAATTGGAGTAAACTATA+TGG | 0.319084 | 1_1:-8212261 | Msa0005560:CDS |
| CAATTCCAACCACGAACTTT+GGG | 0.320655 | 1_1:-8209973 | Msa0005560:CDS |
| AGTATGATACTGTTGTTTAC+TGG | 0.324129 | 1_1:-8213442 | Msa0005560:CDS |
| GTTTGAAGACCATTCATAAC+TGG | 0.338515 | 1_1:+8209250 | None:intergenic |
| ACATCAGTTCCAACATCTTC+TGG | 0.341534 | 1_1:+8213884 | None:intergenic |
| ACAAAACCATGATAATAATA+AGG | 0.343332 | 1_1:-8209716 | Msa0005560:CDS |
| TCGGAGAGAGGATATATTAA+AGG | 0.347750 | 1_1:-8213375 | Msa0005560:CDS |
| CTATACCTACTTTATTTAGA+AGG | 0.350625 | 1_1:-8210459 | Msa0005560:CDS |
| ATTCGGCTTTAACGTCGATT+TGG | 0.353565 | 1_1:+8209534 | None:intergenic |
| TCTTCAACAAGAAGAATATT+CGG | 0.358321 | 1_1:+8209517 | None:intergenic |
| TTACTTCTTCCAACATATCT+TGG | 0.359994 | 1_1:+8213825 | None:intergenic |
| GGCTTATTTAATGCAACATT+GGG | 0.361294 | 1_1:-8213720 | Msa0005560:CDS |
| CCAAAGTTCGTGGTTGGAAT+TGG | 0.374939 | 1_1:+8209974 | None:intergenic |
| AGCATGGATGTCGTGAATAA+TGG | 0.377420 | 1_1:-8209442 | Msa0005560:CDS |
| TTGGATGTCATGTTATCTTC+AGG | 0.380119 | 1_1:-8211802 | Msa0005560:CDS |
| CATGCACCTTATTATTATCA+TGG | 0.383722 | 1_1:+8209710 | None:intergenic |
| CTAGAGTTTGCACTACCATT+TGG | 0.384833 | 1_1:+8209679 | None:intergenic |
| CTTATGAAGAAACAGGCAAT+TGG | 0.396625 | 1_1:-8209210 | Msa0005560:CDS |
| TTCGAGGAAGAGATTAGTTA+TGG | 0.399361 | 1_1:-8213584 | Msa0005560:CDS |
| GCATCGTCCAATATCGAAAC+TGG | 0.402160 | 1_1:+8213548 | None:intergenic |
| ATTACCTCTTCTTGTAAACT+TGG | 0.403224 | 1_1:+8212602 | None:intergenic |
| AACAGTTGGAGGCGAGTATT+CGG | 0.405955 | 1_1:-8213394 | Msa0005560:CDS |
| AATTGGAAGCTACAAAATTC+AGG | 0.406669 | 1_1:-8211344 | Msa0005560:CDS |
| TGATCACATCTCATACTTCT+GGG | 0.407144 | 1_1:+8210804 | None:intergenic |
| TGATGATCCAGATGATCTTT+CGG | 0.409319 | 1_1:-8210037 | Msa0005560:CDS |
| ACCTGTTGTTATTGGCCATC+AGG | 0.410974 | 1_1:-8213240 | Msa0005560:intron |
| AAGAGAGAAGTAATGGAGAA+AGG | 0.411442 | 1_1:-8212380 | Msa0005560:CDS |
| TCTTCTTCTTTGGCAAATGC+TGG | 0.415639 | 1_1:+8210903 | None:intergenic |
| CAGTCAACTATTTCAGCAAA+TGG | 0.416796 | 1_1:-8210855 | Msa0005560:CDS |
| TCAAGTAACATCATTTCAAA+TGG | 0.417988 | 1_1:-8209859 | Msa0005560:CDS |
| ATGTATAGGAGCTATGAAAT+TGG | 0.423052 | 1_1:-8211361 | Msa0005560:intron |
| GAAGTGTTACATACCTCAAT+AGG | 0.423152 | 1_1:+8211231 | None:intergenic |
| ATTAGGTCTTATGAAGAAAC+AGG | 0.429646 | 1_1:-8209217 | Msa0005560:CDS |
| TTGGAACAGGTTGAATTAAT+GGG | 0.430242 | 1_1:-8210150 | Msa0005560:intron |
| GATCTTTCCAAGGTTGAGTC+AGG | 0.431218 | 1_1:-8211745 | Msa0005560:intron |
| CACATTCATACTACCATACA+AGG | 0.433058 | 1_1:-8210082 | Msa0005560:CDS |
| AAATATGGAGGCACAGGTCT+AGG | 0.436640 | 1_1:-8210406 | Msa0005560:CDS |
| TCGAGGAAGAGATTAGTTAT+GGG | 0.438884 | 1_1:-8213583 | Msa0005560:CDS |
| AAGATCTACCGGCGGCGATA+AGG | 0.439631 | 1_1:-8213511 | Msa0005560:CDS |
| TCAAAATAATGTCGTATGAA+TGG | 0.440366 | 1_1:+8209392 | None:intergenic |
| TTCAAACAACAAAACTGATT+AGG | 0.443792 | 1_1:-8209234 | Msa0005560:CDS |
| AGATAAAGGGTCATCTCAAT+TGG | 0.444089 | 1_1:-8213741 | Msa0005560:CDS |
| ATAAGCAGGCGAACGCGGTT+CGG | 0.446744 | 1_1:-8213694 | Msa0005560:CDS |
| CAAGCTGTTGAAACCTTGTA+TGG | 0.450617 | 1_1:+8210069 | None:intergenic |
| TGGGATGCTGCAAGAGAAGC+TGG | 0.451002 | 1_1:-8209190 | Msa0005560:CDS |
| ATGTAAATATTGCAGGTCAC+TGG | 0.451028 | 1_1:-8211153 | Msa0005560:intron |
| CGAGGAAGAGATTAGTTATG+GGG | 0.452682 | 1_1:-8213582 | Msa0005560:CDS |
| TCAGGCCAAGAGAGGTAGTA+AGG | 0.452778 | 1_1:-8211326 | Msa0005560:CDS |
| TGGCTTATTTAATGCAACAT+TGG | 0.452961 | 1_1:-8213721 | Msa0005560:CDS |
| AAATGGAACAAATTCAATTG+AGG | 0.453149 | 1_1:-8209842 | Msa0005560:CDS |
| ACTAGCAATATGTAAACAAC+TGG | 0.455705 | 1_1:-8210383 | Msa0005560:intron |
| TTGAAATGATGTTACTTGAA+TGG | 0.456614 | 1_1:+8209863 | None:intergenic |
| AGTGTCTTGAAAAGTATCTA+AGG | 0.457868 | 1_1:-8208782 | Msa0005560:CDS |
| AGATTCCTTCACACCTGCTC+CGG | 0.458251 | 1_1:+8212412 | None:intergenic |
| CTGGTTCTGGAACAACATAA+AGG | 0.460292 | 1_1:+8210922 | None:intergenic |
| TCGACATCCGAAAGATCATC+TGG | 0.460612 | 1_1:+8210030 | None:intergenic |
| CAGAAAATGTTAACATTGGA+AGG | 0.461173 | 1_1:-8211273 | Msa0005560:CDS |
| ACAATTGGAGTAAACTATAT+GGG | 0.461326 | 1_1:-8212260 | Msa0005560:CDS |
| AGCAAGGCAGGTGAAACAAT+TGG | 0.462061 | 1_1:-8212275 | Msa0005560:CDS |
| GATTAAACCTGTAATGTGAA+TGG | 0.463646 | 1_1:+8212049 | None:intergenic |
| GAAAGGAGTGCCTGCAAAGA+AGG | 0.466099 | 1_1:-8212363 | Msa0005560:CDS |
| CTCTACTTGCTTCATTACAT+TGG | 0.472879 | 1_1:+8209656 | None:intergenic |
| ACATGCCTTACTACCTCTCT+TGG | 0.479070 | 1_1:+8211321 | None:intergenic |
| CTATACATGGCAAGATCTAC+CGG | 0.482979 | 1_1:-8213522 | Msa0005560:CDS |
| TGAACCACAACAAACATGTC+AGG | 0.483397 | 1_1:-8209608 | Msa0005560:CDS |
| GTTTACATGCCAGTTATGAA+TGG | 0.483418 | 1_1:-8209259 | Msa0005560:CDS |
| AAGCAGGAAAGTTTATGTAA+TGG | 0.484176 | 1_1:-8209745 | Msa0005560:CDS |
| AGAATGTTTCGCCAACGGTA+TGG | 0.484664 | 1_1:-8208847 | Msa0005560:CDS |
| ACCTGATGGCCAATAACAAC+AGG | 0.484985 | 1_1:+8213239 | None:intergenic |
| AGATTCTCACAAATTTAGTC+AGG | 0.486787 | 1_1:-8211110 | Msa0005560:intron |
| ACTTTCTGGTGTTGTTAGCA+TGG | 0.486916 | 1_1:-8211872 | Msa0005560:CDS |
| TTACAAATTATACAGATAAA+GGG | 0.487288 | 1_1:-8213754 | Msa0005560:CDS |
| TTATGAAGAAACAGGCAATT+GGG | 0.491132 | 1_1:-8209209 | Msa0005560:CDS |
| GGGAATGGAAATAACAGATC+AGG | 0.491945 | 1_1:-8212240 | Msa0005560:intron |
| AGAATCTCACACAAGTTCAA+TGG | 0.492632 | 1_1:-8209913 | Msa0005560:CDS |
| AAACAAGAGAATTGAAATTG+AGG | 0.492797 | 1_1:-8213468 | Msa0005560:CDS |
| TATTTCAGCAAATGGATTGA+AGG | 0.494958 | 1_1:-8210847 | Msa0005560:CDS |
| GAACCTGTGTTTAGCAAGGC+AGG | 0.495935 | 1_1:-8212287 | Msa0005560:CDS |
| CTTTGAAAATCAGCTATAGC+TGG | 0.498599 | 1_1:+8213788 | None:intergenic |
| GATGTGTACGACACTGGAAT+TGG | 0.499123 | 1_1:-8210627 | Msa0005560:CDS |
| GAGAAAGAATGGCAAAGCTA+AGG | 0.499190 | 1_1:-8212118 | Msa0005560:CDS |
| TTTCTAACCTGACTCAACCT+TGG | 0.509156 | 1_1:+8211738 | None:intergenic |
| ATACACAAGTAAAATTTACA+TGG | 0.513327 | 1_1:+8208753 | None:intergenic |
| AGATAACAAGATTAATATCA+TGG | 0.517181 | 1_1:-8209497 | Msa0005560:CDS |
| GTTTGAAATGGTTTGTGAGA+TGG | 0.519841 | 1_1:-8213960 | None:intergenic |
| GTGTGAGATTCTATGAGGCC+TGG | 0.520618 | 1_1:+8209924 | None:intergenic |
| TAAAGAGAATAATCGATTCG+AGG | 0.522514 | 1_1:-8213600 | Msa0005560:CDS |
| AGGAAGAGACCAAGATATGT+TGG | 0.524319 | 1_1:-8213834 | Msa0005560:CDS |
| ATTGCAGAAAATGTTAACAT+TGG | 0.525478 | 1_1:-8211277 | Msa0005560:CDS |
| GAAGATGTTGGAACTGATGT+TGG | 0.527223 | 1_1:-8213881 | Msa0005560:CDS |
| AGAAGAAGAATCTCACCAAA+AGG | 0.528810 | 1_1:-8210889 | Msa0005560:CDS |
| AATGAGAGCAAAACAAATGC+TGG | 0.532235 | 1_1:-8211923 | Msa0005560:CDS |
| ATGGCTCTGAACTGCGCGTA+TGG | 0.532419 | 1_1:+8209411 | None:intergenic |
| TTTACACATCAAGGCAAAGT+TGG | 0.534123 | 1_1:-8210951 | Msa0005560:CDS |
| GCTCGAAAATATGGAGGCAC+AGG | 0.535185 | 1_1:-8210412 | Msa0005560:CDS |
| CATTTGCTGAAATAGTTGAC+TGG | 0.538486 | 1_1:+8210856 | None:intergenic |
| ATCTGTGACAGTTCCTCCAC+AGG | 0.539752 | 1_1:+8213308 | None:intergenic |
| GCTGTCAAGTTTACACATCA+AGG | 0.539918 | 1_1:-8210960 | Msa0005560:CDS |
| TGATATACTTGATCTTTCCA+AGG | 0.542061 | 1_1:-8211755 | Msa0005560:CDS |
| AGCCGATGATATACCTATTG+AGG | 0.543862 | 1_1:-8211244 | Msa0005560:intron |
| AAAAGCGAGCCCAAAGTTCG+TGG | 0.544177 | 1_1:+8209964 | None:intergenic |
| TTTGAGTAAGAATCGTTGTC+CGG | 0.544394 | 1_1:+8209886 | None:intergenic |
| TGGACGATGCTTACTATACA+TGG | 0.547039 | 1_1:-8213535 | Msa0005560:CDS |
| TATAAAGGAAATAAGAGCCT+AGG | 0.549994 | 1_1:-8208733 | None:intergenic |
| ATGCTAACAACACCAGAAAG+TGG | 0.550524 | 1_1:+8211874 | None:intergenic |
| AACAAACATGTCAGGGTCAA+GGG | 0.550696 | 1_1:-8209600 | Msa0005560:CDS |
| GCGAGCCCAAAGTTCGTGGT+TGG | 0.551447 | 1_1:+8209968 | None:intergenic |
| TACAAAATTCAGGCCAAGAG+AGG | 0.552848 | 1_1:-8211334 | Msa0005560:CDS |
| TGGAGTAAACTATATGGGAA+TGG | 0.555183 | 1_1:-8212255 | Msa0005560:CDS |
| GTGCATGATAGCTTACCAAA+TGG | 0.555791 | 1_1:-8209694 | Msa0005560:CDS |
| GACACTGGAATTGGCATACC+AGG | 0.557084 | 1_1:-8210618 | Msa0005560:intron |
| GCAACATTGGGAGTATAAGC+AGG | 0.560108 | 1_1:-8213708 | Msa0005560:CDS |
| TGACCCTGACATGTTTGTTG+TGG | 0.560232 | 1_1:+8209604 | None:intergenic |
| AGAAAGAATGGCAAAGCTAA+GGG | 0.561686 | 1_1:-8212117 | Msa0005560:CDS |
| TGGAACAGGTTGAATTAATG+GGG | 0.566185 | 1_1:-8210149 | Msa0005560:intron |
| CAACAAACATGTCAGGGTCA+AGG | 0.567768 | 1_1:-8209601 | Msa0005560:CDS |
| CAATCTTAGCAAACAAAGGA+AGG | 0.568976 | 1_1:-8213651 | Msa0005560:CDS |
| CACAAATGCGTCCATACCGT+TGG | 0.570023 | 1_1:+8208836 | None:intergenic |
| ACGCATGATTCTGGATAGGA+TGG | 0.570519 | 1_1:+8210751 | None:intergenic |
| CGTTGTGATGTGTACGACAC+TGG | 0.576348 | 1_1:-8210633 | Msa0005560:CDS |
| ATGTACCTTCTAAATAAAGT+AGG | 0.578318 | 1_1:+8210454 | None:intergenic |
| TCACAGCCTAGAAACTAAGC+AGG | 0.578579 | 1_1:-8209761 | Msa0005560:CDS |
| AACTTGTGTGAGATTCTATG+AGG | 0.581575 | 1_1:+8209919 | None:intergenic |
| TTAAACGCATGATTCTGGAT+AGG | 0.582689 | 1_1:+8210747 | None:intergenic |
| TCACTTCTAATGGATCCACC+AGG | 0.589068 | 1_1:-8209942 | Msa0005560:CDS |
| TCACCTGCCTTGCTAAACAC+AGG | 0.591633 | 1_1:+8212284 | None:intergenic |
| AAGTCAATGATGAAGCAGCT+AGG | 0.595119 | 1_1:-8209469 | Msa0005560:CDS |
| GAGGAAGAGATTAGTTATGG+GGG | 0.595191 | 1_1:-8213581 | Msa0005560:CDS |
| CATCTCATACTTCTGGGTGA+TGG | 0.595990 | 1_1:+8210810 | None:intergenic |
| TTTCACCGGAGCAGGTGTGA+AGG | 0.596051 | 1_1:-8212417 | Msa0005560:CDS |
| AACATGTCAGGGTCAAGGGA+AGG | 0.598087 | 1_1:-8209596 | Msa0005560:CDS |
| GGAGGCGAGTATTCGGAGAG+AGG | 0.602582 | 1_1:-8213387 | Msa0005560:CDS |
| TACCTCAATAGGTATATCAT+CGG | 0.603020 | 1_1:+8211242 | None:intergenic |
| TTGACAATCTTAGCAAACAA+AGG | 0.607034 | 1_1:-8213655 | Msa0005560:CDS |
| TGTAGAACCTGTGTTTAGCA+AGG | 0.614185 | 1_1:-8212291 | Msa0005560:CDS |
| TGATTGTATTGAAGACATGA+TGG | 0.615316 | 1_1:-8213933 | Msa0005560:CDS |
| TTGGAATTGGAAGAATCCCT+CGG | 0.616918 | 1_1:+8209987 | None:intergenic |
| GAAGCAGCTAGGATATAGCA+TGG | 0.617920 | 1_1:-8209458 | Msa0005560:CDS |
| GCTGAAGAATGTTTCGCCAA+CGG | 0.618188 | 1_1:-8208852 | Msa0005560:CDS |
| TCAATGTGGCCAGAAGATGT+TGG | 0.623443 | 1_1:-8213893 | Msa0005560:CDS |
| GAACCACAACAAACATGTCA+GGG | 0.628011 | 1_1:-8209607 | Msa0005560:CDS |
| CTGTTGTTTACTGGAAACAA+CGG | 0.636650 | 1_1:-8213433 | Msa0005560:CDS |
| GGAACAGGTTGAATTAATGG+GGG | 0.643012 | 1_1:-8210148 | Msa0005560:intron |
| TGAGATTCTATGAGGCCTGG+TGG | 0.645843 | 1_1:+8209927 | None:intergenic |
| AAGACAATCATCACCTGTGG+AGG | 0.647566 | 1_1:-8213321 | Msa0005560:CDS |
| AATTGCAGTTCAGAAAGCAA+AGG | 0.648370 | 1_1:-8212090 | Msa0005560:CDS |
| GGAGTATAAGCAGGCGAACG+CGG | 0.650670 | 1_1:-8213699 | Msa0005560:CDS |
| TGAAAGACAATCATCACCTG+TGG | 0.652639 | 1_1:-8213324 | Msa0005560:CDS |
| AAAGCGCATCCACATTGTTG+CGG | 0.653392 | 1_1:-8209119 | Msa0005560:intron |
| TTGAAGAGTTATCTTCAATG+TGG | 0.654257 | 1_1:-8213907 | Msa0005560:CDS |
| AACGAAGATGACACAACCGA+GGG | 0.659560 | 1_1:-8210003 | Msa0005560:CDS |
| GACCATGCTCGAAAATATGG+AGG | 0.667505 | 1_1:-8210418 | Msa0005560:CDS |
| GAACAGGTTGAATTAATGGG+GGG | 0.672744 | 1_1:-8210147 | Msa0005560:intron |
| GGATGTCGTGAATAATGGAG+TGG | 0.687300 | 1_1:-8209437 | Msa0005560:CDS |
| TAACGAAGATGACACAACCG+AGG | 0.691038 | 1_1:-8210004 | Msa0005560:CDS |
| GTGACTAGCAAAGAACATTG+TGG | 0.699673 | 1_1:-8210114 | Msa0005560:CDS |
| GTATGGTAGTATGAATGTGA+AGG | 0.713387 | 1_1:+8210086 | None:intergenic |
| AATTGCTCACCGCAACAATG+TGG | 0.726029 | 1_1:+8209110 | None:intergenic |
| ATTCAACTGAAACAACAGTG+TGG | 0.734063 | 1_1:-8210659 | Msa0005560:CDS |
| TACATGGCAAGATCTACCGG+CGG | 0.803486 | 1_1:-8213519 | Msa0005560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATTATATATCTTCTAT+TGG | - | chr1_1:8209754-8209773 | Msa0005560:CDS | 10.0% |
| !! | AAAATTCATATATTAAGATT+TGG | + | chr1_1:8210671-8210690 | None:intergenic | 10.0% |
| !!! | AATAATTTGATAACAAAAAA+TGG | + | chr1_1:8210984-8211003 | None:intergenic | 10.0% |
| !! | TTTATACAATAAAAAAACTT+AGG | - | chr1_1:8213690-8213709 | Msa0005560:CDS | 10.0% |
| !! | TTACAAATTATACAGATAAA+GGG | - | chr1_1:8208933-8208952 | Msa0005560:intron | 15.0% |
| !!! | AATGAATTTTTCAATCTAAA+AGG | - | chr1_1:8209828-8209847 | Msa0005560:CDS | 15.0% |
| !!! | TGTTATTTTGGTTTTTTTTA+AGG | - | chr1_1:8210477-8210496 | Msa0005560:intron | 15.0% |
| !!! | ATTTTTAAGTGTAAATTACT+TGG | + | chr1_1:8211508-8211527 | None:intergenic | 15.0% |
| !! | TGAATTAAACTTATAACTAA+AGG | + | chr1_1:8212389-8212408 | None:intergenic | 15.0% |
| !!! | TTAGTTAAGATTTTGTTAAT+CGG | + | chr1_1:8212489-8212508 | None:intergenic | 15.0% |
| !!! | TAAATTTTACTTGTGTATAA+AGG | - | chr1_1:8213939-8213958 | Msa0005560:CDS | 15.0% |
| !! | CTTACAAATTATACAGATAA+AGG | - | chr1_1:8208932-8208951 | Msa0005560:intron | 20.0% |
| !!! | TAATTTTCTCGAATTATTAG+CGG | - | chr1_1:8209614-8209633 | Msa0005560:CDS | 20.0% |
| !!! | TTTTAGTTGATTCATCATTT+TGG | - | chr1_1:8209780-8209799 | Msa0005560:CDS | 20.0% |
| !!! | TCAGGTAAAAATTGTTATTT+TGG | - | chr1_1:8210465-8210484 | Msa0005560:CDS | 20.0% |
| !!! | TACTTTATTTTATCCAAACA+AGG | + | chr1_1:8211041-8211060 | None:intergenic | 20.0% |
| !!! | TCAATAGATGATTTTTATCA+TGG | + | chr1_1:8211187-8211206 | None:intergenic | 20.0% |
| !!! | TCAATTCTAAAACAAAAGAA+AGG | + | chr1_1:8212115-8212134 | None:intergenic | 20.0% |
| !! | TATATCTAATAAGATTTCCT+TGG | - | chr1_1:8212512-8212531 | Msa0005560:intron | 20.0% |
| !! | ACAAAACCATGATAATAATA+AGG | - | chr1_1:8212971-8212990 | Msa0005560:intron | 20.0% |
| !! | AGATAACAAGATTAATATCA+TGG | - | chr1_1:8213190-8213209 | Msa0005560:intron | 20.0% |
| !! | ATACACAAGTAAAATTTACA+TGG | + | chr1_1:8213937-8213956 | None:intergenic | 20.0% |
| ! | AAACAAGAGAATTGAAATTG+AGG | - | chr1_1:8209219-8209238 | Msa0005560:CDS | 25.0% |
| ! | TTCAGTTTAAATACAAGTGT+CGG | + | chr1_1:8209589-8209608 | None:intergenic | 25.0% |
| ! | CAACTCATGTTTAAATACTA+CGG | + | chr1_1:8209877-8209896 | None:intergenic | 25.0% |
| !! | TAATTTTTCCAGGACATTAT+AGG | - | chr1_1:8210229-8210248 | Msa0005560:intron | 25.0% |
| !!! | AGATTTTAAGAGAGAAGTAA+TGG | - | chr1_1:8210300-8210319 | Msa0005560:intron | 25.0% |
| ! | AACAATTGGAGTAAACTATA+TGG | - | chr1_1:8210426-8210445 | Msa0005560:CDS | 25.0% |
| ! | ACAATTGGAGTAAACTATAT+GGG | - | chr1_1:8210427-8210446 | Msa0005560:CDS | 25.0% |
| ! | AATAAAACCATTCACATTAC+AGG | - | chr1_1:8210631-8210650 | Msa0005560:CDS | 25.0% |
| !! | TTGATAACAAAAAATGGTGA+AGG | + | chr1_1:8210978-8210997 | None:intergenic | 25.0% |
| !! | AATGTTAACATTTTCTGCAA+TGG | + | chr1_1:8211411-8211430 | None:intergenic | 25.0% |
| ! | ATTGCAGAAAATGTTAACAT+TGG | - | chr1_1:8211410-8211429 | Msa0005560:intron | 25.0% |
| ! | TATCTGGTAATAATCAAGTA+TGG | + | chr1_1:8211481-8211500 | None:intergenic | 25.0% |
| ! | TAAATTACTTGGCATTTATC+TGG | + | chr1_1:8211497-8211516 | None:intergenic | 25.0% |
| ! | TTCTTTCATGTAAATATTGC+AGG | - | chr1_1:8211527-8211546 | Msa0005560:intron | 25.0% |
| !!! | TTATCTGTTTTCTCTAGAAT+CGG | - | chr1_1:8211614-8211633 | Msa0005560:intron | 25.0% |
| !! | CTATACCTACTTTATTTAGA+AGG | - | chr1_1:8212228-8212247 | Msa0005560:intron | 25.0% |
| ! | ATGTACCTTCTAAATAAAGT+AGG | + | chr1_1:8212236-8212255 | None:intergenic | 25.0% |
| ! | CTAAAGGAAACTAAAGATTA+AGG | + | chr1_1:8212373-8212392 | None:intergenic | 25.0% |
| !! | GATTAGTTATCCTTATCAAT+CGG | + | chr1_1:8212445-8212464 | None:intergenic | 25.0% |
| ! | TAATAAGATTTCCTTGGATT+TGG | - | chr1_1:8212518-8212537 | Msa0005560:intron | 25.0% |
| !! | TTGAAATGATGTTACTTGAA+TGG | + | chr1_1:8212827-8212846 | None:intergenic | 25.0% |
| ! | TCAAGTAACATCATTTCAAA+TGG | - | chr1_1:8212828-8212847 | Msa0005560:intron | 25.0% |
| ! | AAATGGAACAAATTCAATTG+AGG | - | chr1_1:8212845-8212864 | Msa0005560:intron | 25.0% |
| ! | TCTTCAACAAGAAGAATATT+CGG | + | chr1_1:8213173-8213192 | None:intergenic | 25.0% |
| ! | TCAAAATAATGTCGTATGAA+TGG | + | chr1_1:8213298-8213317 | None:intergenic | 25.0% |
| !!! | TTCATACGACATTATTTTGA+TGG | - | chr1_1:8213298-8213317 | Msa0005560:CDS | 25.0% |
| !!! | TTATGCGATTTTTTGTGATA+CGG | - | chr1_1:8213381-8213400 | Msa0005560:CDS | 25.0% |
| ! | TTCAAACAACAAAACTGATT+AGG | - | chr1_1:8213453-8213472 | Msa0005560:CDS | 25.0% |
| ! | CAATAAAAAAACTTAGGAAG+TGG | - | chr1_1:8213696-8213715 | Msa0005560:CDS | 25.0% |
| !! | TAGGAAGTGGTTTTTAATAT+TGG | - | chr1_1:8213709-8213728 | Msa0005560:CDS | 25.0% |
| TGATTGTATTGAAGACATGA+TGG | - | chr1_1:8208754-8208773 | Msa0005560:three_prime_UTR | 30.0% | |
| TTGAAGAGTTATCTTCAATG+TGG | - | chr1_1:8208780-8208799 | Msa0005560:CDS | 30.0% | |
| CAATTCAACATAGAAAAACC+AGG | - | chr1_1:8208833-8208852 | Msa0005560:CDS | 30.0% | |
| TTACTTCTTCCAACATATCT+TGG | + | chr1_1:8208865-8208884 | None:intergenic | 30.0% | |
| !! | AGCTGATTTTCAAAGACTAA+TGG | - | chr1_1:8208907-8208926 | Msa0005560:intron | 30.0% |
| TGGCTTATTTAATGCAACAT+TGG | - | chr1_1:8208966-8208985 | Msa0005560:intron | 30.0% | |
| GGCTTATTTAATGCAACATT+GGG | - | chr1_1:8208967-8208986 | Msa0005560:intron | 30.0% | |
| TTGACAATCTTAGCAAACAA+AGG | - | chr1_1:8209032-8209051 | Msa0005560:intron | 30.0% | |
| !! | TAAAGAGAATAATCGATTCG+AGG | - | chr1_1:8209087-8209106 | Msa0005560:intron | 30.0% |
| ! | AGTATGATACTGTTGTTTAC+TGG | - | chr1_1:8209245-8209264 | Msa0005560:CDS | 30.0% |
| !! | GCAAGATTTTGAAAAACAGT+TGG | - | chr1_1:8209279-8209298 | Msa0005560:intron | 30.0% |
| !! | AGATTTTGAAAAACAGTTGG+AGG | - | chr1_1:8209282-8209301 | Msa0005560:intron | 30.0% |
| ! | TCATAGCTTGCAAAAAATCT+TGG | - | chr1_1:8209680-8209699 | Msa0005560:CDS | 30.0% |
| ! | TTGCAAAAAATCTTGGTGTA+TGG | - | chr1_1:8209687-8209706 | Msa0005560:CDS | 30.0% |
| ! | GTTTTTCGTATCTATTAACC+AGG | - | chr1_1:8209989-8210008 | Msa0005560:CDS | 30.0% |
| GAATGTTAAAACAGAAATCC+TGG | + | chr1_1:8210010-8210029 | None:intergenic | 30.0% | |
| ! | TTTTCCAAGTTTACAAGAAG+AGG | - | chr1_1:8210081-8210100 | Msa0005560:CDS | 30.0% |
| ATTACCTCTTCTTGTAAACT+TGG | + | chr1_1:8210088-8210107 | None:intergenic | 30.0% | |
| ! | CAGAAATTTTATGCAGCTTT+TGG | + | chr1_1:8210169-8210188 | None:intergenic | 30.0% |
| ! | TACTTGCTCATAATTTTTCC+AGG | - | chr1_1:8210219-8210238 | Msa0005560:intron | 30.0% |
| ! | AAAGTTATTTCCTTCTTTGC+AGG | + | chr1_1:8210337-8210356 | None:intergenic | 30.0% |
| !!! | ACTTTTGAGACAGAACTATT+TGG | - | chr1_1:8210352-8210371 | Msa0005560:intron | 30.0% |
| AATAATATCGAGAAAATCGC+AGG | - | chr1_1:8210537-8210556 | Msa0005560:intron | 30.0% | |
| GATTAAACCTGTAATGTGAA+TGG | + | chr1_1:8210641-8210660 | None:intergenic | 30.0% | |
| TGATATACTTGATCTTTCCA+AGG | - | chr1_1:8210932-8210951 | Msa0005560:CDS | 30.0% | |
| AATAAGTCGAAAACATCTCA+TGG | - | chr1_1:8211098-8211117 | Msa0005560:intron | 30.0% | |
| ATGTATAGGAGCTATGAAAT+TGG | - | chr1_1:8211326-8211345 | Msa0005560:CDS | 30.0% | |
| AATTGGAAGCTACAAAATTC+AGG | - | chr1_1:8211343-8211362 | Msa0005560:CDS | 30.0% | |
| CAGAAAATGTTAACATTGGA+AGG | - | chr1_1:8211414-8211433 | Msa0005560:intron | 30.0% | |
| TACCTCAATAGGTATATCAT+CGG | + | chr1_1:8211448-8211467 | None:intergenic | 30.0% | |
| AGATTCTCACAAATTTAGTC+AGG | - | chr1_1:8211577-8211596 | Msa0005560:intron | 30.0% | |
| !! | TATTTCAGCAAATGGATTGA+AGG | - | chr1_1:8211840-8211859 | Msa0005560:CDS | 30.0% |
| ACTAGCAATATGTAAACAAC+TGG | - | chr1_1:8212304-8212323 | Msa0005560:CDS | 30.0% | |
| TTTACAGAAACCGATTGATA+AGG | - | chr1_1:8212432-8212451 | Msa0005560:CDS | 30.0% | |
| ! | TTTGGAACAGGTTGAATTAA+TGG | - | chr1_1:8212536-8212555 | Msa0005560:intron | 30.0% |
| ! | TTGGAACAGGTTGAATTAAT+GGG | - | chr1_1:8212537-8212556 | Msa0005560:intron | 30.0% |
| AAGCAGGAAAGTTTATGTAA+TGG | - | chr1_1:8212942-8212961 | Msa0005560:intron | 30.0% | |
| CATGCACCTTATTATTATCA+TGG | + | chr1_1:8212980-8212999 | None:intergenic | 30.0% | |
| ! | TCGCATAATGTGTGAATTTT+AGG | + | chr1_1:8213369-8213388 | None:intergenic | 30.0% |
| ! | ATTAGGTCTTATGAAGAAAC+AGG | - | chr1_1:8213470-8213489 | Msa0005560:CDS | 30.0% |
| TTATGAAGAAACAGGCAATT+GGG | - | chr1_1:8213478-8213497 | Msa0005560:CDS | 30.0% | |
| !! | TTCAATTTTAGGAATGTCAC+TGG | + | chr1_1:8213883-8213902 | None:intergenic | 30.0% |
| ! | CAAGACACTCTTTCAATTTT+AGG | + | chr1_1:8213894-8213913 | None:intergenic | 30.0% |
| !! | AGTGTCTTGAAAAGTATCTA+AGG | - | chr1_1:8213905-8213924 | Msa0005560:CDS | 30.0% |
| ! | CTTTGAAAATCAGCTATAGC+TGG | + | chr1_1:8208902-8208921 | None:intergenic | 35.0% |
| AGATAAAGGGTCATCTCAAT+TGG | - | chr1_1:8208946-8208965 | Msa0005560:intron | 35.0% | |
| CAATCTTAGCAAACAAAGGA+AGG | - | chr1_1:8209036-8209055 | Msa0005560:intron | 35.0% | |
| GGAAGTTGAGCAAAGAAAAT+TGG | - | chr1_1:8209057-8209076 | Msa0005560:intron | 35.0% | |
| ! | TTCGAGGAAGAGATTAGTTA+TGG | - | chr1_1:8209103-8209122 | Msa0005560:intron | 35.0% |
| ! | TCGAGGAAGAGATTAGTTAT+GGG | - | chr1_1:8209104-8209123 | Msa0005560:intron | 35.0% |
| ! | CTGTTGTTTACTGGAAACAA+CGG | - | chr1_1:8209254-8209273 | Msa0005560:CDS | 35.0% |
| TCGGAGAGAGGATATATTAA+AGG | - | chr1_1:8209312-8209331 | Msa0005560:intron | 35.0% | |
| CAAAATGCACCTGTTGTTAT+TGG | - | chr1_1:8209439-8209458 | Msa0005560:CDS | 35.0% | |
| ACTCACTGTAATATACCTGA+TGG | + | chr1_1:8209465-8209484 | None:intergenic | 35.0% | |
| CATTACTTGCAAATGAAGCA+CGG | - | chr1_1:8209511-8209530 | Msa0005560:CDS | 35.0% | |
| !! | TTAAATACAAGTGTCGGTGT+CGG | + | chr1_1:8209583-8209602 | None:intergenic | 35.0% |
| CAAGCTATGAAACACGTATA+CGG | + | chr1_1:8209670-8209689 | None:intergenic | 35.0% | |
| ! | AAAAATCTTGGTGTATGGCT+TGG | - | chr1_1:8209692-8209711 | Msa0005560:CDS | 35.0% |
| TTCAATCTAAAAGGCAGACT+CGG | - | chr1_1:8209837-8209856 | Msa0005560:CDS | 35.0% | |
| ACATTCTGATTATCTCTTGC+AGG | - | chr1_1:8210024-8210043 | Msa0005560:CDS | 35.0% | |
| !! | CTGTTTTTCCTATAATGTCC+TGG | + | chr1_1:8210240-8210259 | None:intergenic | 35.0% |
| ! | ACAGATGTCGAAATTTTCAC+CGG | - | chr1_1:8210256-8210275 | Msa0005560:intron | 35.0% |
| ! | AAGAGAGAAGTAATGGAGAA+AGG | - | chr1_1:8210307-8210326 | Msa0005560:intron | 35.0% |
| TGGAGTAAACTATATGGGAA+TGG | - | chr1_1:8210432-8210451 | Msa0005560:CDS | 35.0% | |
| GGTGAGAAAAAGAGAAAGAA+TGG | - | chr1_1:8210558-8210577 | Msa0005560:intron | 35.0% | |
| AGAAAGAATGGCAAAGCTAA+GGG | - | chr1_1:8210570-8210589 | Msa0005560:intron | 35.0% | |
| AATTGCAGTTCAGAAAGCAA+AGG | - | chr1_1:8210597-8210616 | Msa0005560:intron | 35.0% | |
| TTCTTGATCCCTTGTAATAG+AGG | - | chr1_1:8210737-8210756 | Msa0005560:CDS | 35.0% | |
| CATTGTCTCCTCTATTACAA+GGG | + | chr1_1:8210748-8210767 | None:intergenic | 35.0% | |
| TCATTGTCTCCTCTATTACA+AGG | + | chr1_1:8210749-8210768 | None:intergenic | 35.0% | |
| AATGAGAGCAAAACAAATGC+TGG | - | chr1_1:8210764-8210783 | Msa0005560:CDS | 35.0% | |
| ! | TAAAGAGCAAAGACAGCTTT+TGG | - | chr1_1:8210866-8210885 | Msa0005560:CDS | 35.0% |
| TTGGATGTCATGTTATCTTC+AGG | - | chr1_1:8210885-8210904 | Msa0005560:CDS | 35.0% | |
| CATGTTATCTTCAGGAGATT+TGG | - | chr1_1:8210893-8210912 | Msa0005560:CDS | 35.0% | |
| ! | ACTGTTTTCATAAGCTGTGT+TGG | - | chr1_1:8211063-8211082 | Msa0005560:intron | 35.0% |
| CCTATACATAAGTTGTGTAG+TGG | + | chr1_1:8211315-8211334 | None:intergenic | 35.0% | |
| CCACTACACAACTTATGTAT+AGG | - | chr1_1:8211312-8211331 | Msa0005560:CDS | 35.0% | |
| ! | GAAGTGTTACATACCTCAAT+AGG | + | chr1_1:8211459-8211478 | None:intergenic | 35.0% |
| ATGTAAATATTGCAGGTCAC+TGG | - | chr1_1:8211534-8211553 | Msa0005560:intron | 35.0% | |
| !!! | CTGGAGATGTTTTAAGGATT+CGG | - | chr1_1:8211553-8211572 | Msa0005560:intron | 35.0% |
| !!! | TGTTTTCTCTAGAATCGGAT+TGG | - | chr1_1:8211619-8211638 | Msa0005560:intron | 35.0% |
| ! | AAGGAAGCACAAATAAAAGC+TGG | + | chr1_1:8211657-8211676 | None:intergenic | 35.0% |
| TCAGAACTACGATACTTAGA+GGG | + | chr1_1:8211685-8211704 | None:intergenic | 35.0% | |
| ATCAGAACTACGATACTTAG+AGG | + | chr1_1:8211686-8211705 | None:intergenic | 35.0% | |
| TTTACACATCAAGGCAAAGT+TGG | - | chr1_1:8211736-8211755 | Msa0005560:intron | 35.0% | |
| TTGGTGAGATTCTTCTTCTT+TGG | + | chr1_1:8211797-8211816 | None:intergenic | 35.0% | |
| AGAAGAAGAATCTCACCAAA+AGG | - | chr1_1:8211798-8211817 | Msa0005560:CDS | 35.0% | |
| ! | CATTTGCTGAAATAGTTGAC+TGG | + | chr1_1:8211834-8211853 | None:intergenic | 35.0% |
| CAGTCAACTATTTCAGCAAA+TGG | - | chr1_1:8211832-8211851 | Msa0005560:CDS | 35.0% | |
| TGATCACATCTCATACTTCT+GGG | + | chr1_1:8211886-8211905 | None:intergenic | 35.0% | |
| TTGATCACATCTCATACTTC+TGG | + | chr1_1:8211887-8211906 | None:intergenic | 35.0% | |
| TTAAACGCATGATTCTGGAT+AGG | + | chr1_1:8211943-8211962 | None:intergenic | 35.0% | |
| CATTGTTAAACGCATGATTC+TGG | + | chr1_1:8211948-8211967 | None:intergenic | 35.0% | |
| ATTCAACTGAAACAACAGTG+TGG | - | chr1_1:8212028-8212047 | Msa0005560:intron | 35.0% | |
| CACAATTACTAACACATACC+TGG | + | chr1_1:8212090-8212109 | None:intergenic | 35.0% | |
| GTTGTAATGTGACACAGAAA+AGG | - | chr1_1:8212205-8212224 | Msa0005560:intron | 35.0% | |
| AAACAACTGGTAAACTCTTC+CGG | - | chr1_1:8212317-8212336 | Msa0005560:CDS | 35.0% | |
| GTCAAATGAAAATGCTTTGC+CGG | + | chr1_1:8212339-8212358 | None:intergenic | 35.0% | |
| ! | TGGAACAGGTTGAATTAATG+GGG | - | chr1_1:8212538-8212557 | Msa0005560:intron | 35.0% |
| GTATGGTAGTATGAATGTGA+AGG | + | chr1_1:8212604-8212623 | None:intergenic | 35.0% | |
| CACATTCATACTACCATACA+AGG | - | chr1_1:8212605-8212624 | Msa0005560:intron | 35.0% | |
| TGATGATCCAGATGATCTTT+CGG | - | chr1_1:8212650-8212669 | Msa0005560:intron | 35.0% | |
| AACTTGTGTGAGATTCTATG+AGG | + | chr1_1:8212771-8212790 | None:intergenic | 35.0% | |
| AGAATCTCACACAAGTTCAA+TGG | - | chr1_1:8212774-8212793 | Msa0005560:intron | 35.0% | |
| ! | ACACAAGTTCAATGGTTTTC+CGG | - | chr1_1:8212782-8212801 | Msa0005560:intron | 35.0% |
| TTTGAGTAAGAATCGTTGTC+CGG | + | chr1_1:8212804-8212823 | None:intergenic | 35.0% | |
| AACTTTCCTGCTTAGTTTCT+AGG | + | chr1_1:8212935-8212954 | None:intergenic | 35.0% | |
| CTCTACTTGCTTCATTACAT+TGG | + | chr1_1:8213034-8213053 | None:intergenic | 35.0% | |
| GTTTGACACTTTCACTTTAC+AGG | - | chr1_1:8213403-8213422 | Msa0005560:CDS | 35.0% | |
| GTTTACATGCCAGTTATGAA+TGG | - | chr1_1:8213428-8213447 | Msa0005560:CDS | 35.0% | |
| GTTTGAAGACCATTCATAAC+TGG | + | chr1_1:8213440-8213459 | None:intergenic | 35.0% | |
| CTTATGAAGAAACAGGCAAT+TGG | - | chr1_1:8213477-8213496 | Msa0005560:CDS | 35.0% | |
| CAAACAACAACAGACAACTT+AGG | - | chr1_1:8213623-8213642 | Msa0005560:CDS | 35.0% | |
| TCATCTGCATCAATATGAGA+TGG | + | chr1_1:8213792-8213811 | None:intergenic | 35.0% | |
| ACATCAGTTCCAACATCTTC+TGG | + | chr1_1:8208806-8208825 | None:intergenic | 40.0% | |
| GAAGATGTTGGAACTGATGT+TGG | - | chr1_1:8208806-8208825 | Msa0005560:CDS | 40.0% | |
| AACATATCTTGGTCTCTTCC+TGG | + | chr1_1:8208854-8208873 | None:intergenic | 40.0% | |
| AGGAAGAGACCAAGATATGT+TGG | - | chr1_1:8208853-8208872 | Msa0005560:CDS | 40.0% | |
| ! | CGAGGAAGAGATTAGTTATG+GGG | - | chr1_1:8209105-8209124 | Msa0005560:intron | 40.0% |
| ! | GAGGAAGAGATTAGTTATGG+GGG | - | chr1_1:8209106-8209125 | Msa0005560:intron | 40.0% |
| CAAACGTCCAGTTTCGATAT+TGG | - | chr1_1:8209132-8209151 | Msa0005560:CDS | 40.0% | |
| TGGACGATGCTTACTATACA+TGG | - | chr1_1:8209152-8209171 | Msa0005560:CDS | 40.0% | |
| CTATACATGGCAAGATCTAC+CGG | - | chr1_1:8209165-8209184 | Msa0005560:CDS | 40.0% | |
| TGAAAGACAATCATCACCTG+TGG | - | chr1_1:8209363-8209382 | Msa0005560:intron | 40.0% | |
| TCTCGAATTATTAGCGGTGT+CGG | - | chr1_1:8209620-8209639 | Msa0005560:CDS | 40.0% | |
| ATGAAACACGTATACGGACA+CGG | + | chr1_1:8209664-8209683 | None:intergenic | 40.0% | |
| !!! | CTTTTGAAGCTCTTGTTGCA+AGG | - | chr1_1:8210113-8210132 | Msa0005560:CDS | 40.0% |
| TGTAGAACCTGTGTTTAGCA+AGG | - | chr1_1:8210396-8210415 | Msa0005560:CDS | 40.0% | |
| GGGAATGGAAATAACAGATC+AGG | - | chr1_1:8210447-8210466 | Msa0005560:CDS | 40.0% | |
| GAGAAAGAATGGCAAAGCTA+AGG | - | chr1_1:8210569-8210588 | Msa0005560:intron | 40.0% | |
| ATGCTAACAACACCAGAAAG+TGG | + | chr1_1:8210816-8210835 | None:intergenic | 40.0% | |
| !! | ACTTTCTGGTGTTGTTAGCA+TGG | - | chr1_1:8210815-8210834 | Msa0005560:CDS | 40.0% |
| TTTCTAACCTGACTCAACCT+TGG | + | chr1_1:8210952-8210971 | None:intergenic | 40.0% | |
| TGTGAAGACTACACCTTGTT+TGG | - | chr1_1:8211025-8211044 | Msa0005560:intron | 40.0% | |
| TACAAAATTCAGGCCAAGAG+AGG | - | chr1_1:8211353-8211372 | Msa0005560:CDS | 40.0% | |
| AGCCGATGATATACCTATTG+AGG | - | chr1_1:8211443-8211462 | Msa0005560:intron | 40.0% | |
| ! | AGGTCACTGGAGATGTTTTA+AGG | - | chr1_1:8211547-8211566 | Msa0005560:intron | 40.0% |
| AGAACTACGATACTTAGAGG+GGG | + | chr1_1:8211683-8211702 | None:intergenic | 40.0% | |
| CAGAACTACGATACTTAGAG+GGG | + | chr1_1:8211684-8211703 | None:intergenic | 40.0% | |
| GCTGTCAAGTTTACACATCA+AGG | - | chr1_1:8211727-8211746 | Msa0005560:intron | 40.0% | |
| !! | CTGGTTCTGGAACAACATAA+AGG | + | chr1_1:8211768-8211787 | None:intergenic | 40.0% |
| TCTTCTTCTTTGGCAAATGC+TGG | + | chr1_1:8211787-8211806 | None:intergenic | 40.0% | |
| ! | GATTTCCTTGGATTTGGAAC+AGG | - | chr1_1:8212524-8212543 | Msa0005560:intron | 40.0% |
| TTCAACCTGTTCCAAATCCA+AGG | + | chr1_1:8212532-8212551 | None:intergenic | 40.0% | |
| ! | GGAACAGGTTGAATTAATGG+GGG | - | chr1_1:8212539-8212558 | Msa0005560:intron | 40.0% |
| ! | GAACAGGTTGAATTAATGGG+GGG | - | chr1_1:8212540-8212559 | Msa0005560:intron | 40.0% |
| GTGACTAGCAAAGAACATTG+TGG | - | chr1_1:8212573-8212592 | Msa0005560:intron | 40.0% | |
| CAAGCTGTTGAAACCTTGTA+TGG | + | chr1_1:8212621-8212640 | None:intergenic | 40.0% | |
| TTGGAATTGGAAGAATCCCT+CGG | + | chr1_1:8212703-8212722 | None:intergenic | 40.0% | |
| CAATTCCAACCACGAACTTT+GGG | - | chr1_1:8212714-8212733 | Msa0005560:intron | 40.0% | |
| GTGCATGATAGCTTACCAAA+TGG | - | chr1_1:8212993-8213012 | Msa0005560:intron | 40.0% | |
| CTAGAGTTTGCACTACCATT+TGG | + | chr1_1:8213011-8213030 | None:intergenic | 40.0% | |
| TGAACCACAACAAACATGTC+AGG | - | chr1_1:8213079-8213098 | Msa0005560:intron | 40.0% | |
| GAACCACAACAAACATGTCA+GGG | - | chr1_1:8213080-8213099 | Msa0005560:intron | 40.0% | |
| AACAAACATGTCAGGGTCAA+GGG | - | chr1_1:8213087-8213106 | Msa0005560:intron | 40.0% | |
| ! | ATTCGGCTTTAACGTCGATT+TGG | + | chr1_1:8213156-8213175 | None:intergenic | 40.0% |
| AAGTCAATGATGAAGCAGCT+AGG | - | chr1_1:8213218-8213237 | Msa0005560:intron | 40.0% | |
| AGCATGGATGTCGTGAATAA+TGG | - | chr1_1:8213245-8213264 | Msa0005560:CDS | 40.0% | |
| !! | AATGTGGATGCGCTTTTTAG+GGG | + | chr1_1:8213564-8213583 | None:intergenic | 40.0% |
| !! | CAATGTGGATGCGCTTTTTA+GGG | + | chr1_1:8213565-8213584 | None:intergenic | 40.0% |
| !! | ACAATGTGGATGCGCTTTTT+AGG | + | chr1_1:8213566-8213585 | None:intergenic | 40.0% |
| TGTATCCTTGCACACAATTG+CGG | + | chr1_1:8213670-8213689 | None:intergenic | 40.0% | |
| TCAATGTGGCCAGAAGATGT+TGG | - | chr1_1:8208794-8208813 | Msa0005560:CDS | 45.0% | |
| ! | GCAACATTGGGAGTATAAGC+AGG | - | chr1_1:8208979-8208998 | Msa0005560:intron | 45.0% |
| GCATCGTCCAATATCGAAAC+TGG | + | chr1_1:8209142-8209161 | None:intergenic | 45.0% | |
| AACAGTTGGAGGCGAGTATT+CGG | - | chr1_1:8209293-8209312 | Msa0005560:intron | 45.0% | |
| AAGACAATCATCACCTGTGG+AGG | - | chr1_1:8209366-8209385 | Msa0005560:intron | 45.0% | |
| ! | ACCTGTTGTTATTGGCCATC+AGG | - | chr1_1:8209447-8209466 | Msa0005560:CDS | 45.0% |
| ACCTGATGGCCAATAACAAC+AGG | + | chr1_1:8209451-8209470 | None:intergenic | 45.0% | |
| AGCAAGGCAGGTGAAACAAT+TGG | - | chr1_1:8210412-8210431 | Msa0005560:CDS | 45.0% | |
| ! | GAGATAAGATCGCCACTTTC+TGG | - | chr1_1:8210801-8210820 | Msa0005560:CDS | 45.0% |
| GATCTTTCCAAGGTTGAGTC+AGG | - | chr1_1:8210942-8210961 | Msa0005560:CDS | 45.0% | |
| AAGCTGTGTTGGAGAGCTTA+TGG | - | chr1_1:8211074-8211093 | Msa0005560:intron | 45.0% | |
| ACATGCCTTACTACCTCTCT+TGG | + | chr1_1:8211369-8211388 | None:intergenic | 45.0% | |
| !! | TCTTTGGCAAATGCTGGTTC+TGG | + | chr1_1:8211781-8211800 | None:intergenic | 45.0% |
| !!! | ACTGGTCTTCTGTGACCTTT+TGG | + | chr1_1:8211816-8211835 | None:intergenic | 45.0% |
| CATCTCATACTTCTGGGTGA+TGG | + | chr1_1:8211880-8211899 | None:intergenic | 45.0% | |
| ACGCATGATTCTGGATAGGA+TGG | + | chr1_1:8211939-8211958 | None:intergenic | 45.0% | |
| GATGTGTACGACACTGGAAT+TGG | - | chr1_1:8212060-8212079 | Msa0005560:CDS | 45.0% | |
| GCAGACCATGCTCGAAAATA+TGG | - | chr1_1:8212266-8212285 | Msa0005560:CDS | 45.0% | |
| GACCATGCTCGAAAATATGG+AGG | - | chr1_1:8212269-8212288 | Msa0005560:CDS | 45.0% | |
| !! | TGCCTCCATATTTTCGAGCA+TGG | + | chr1_1:8212274-8212293 | None:intergenic | 45.0% |
| ! | AAATATGGAGGCACAGGTCT+AGG | - | chr1_1:8212281-8212300 | Msa0005560:CDS | 45.0% |
| TCGACATCCGAAAGATCATC+TGG | + | chr1_1:8212660-8212679 | None:intergenic | 45.0% | |
| TAACGAAGATGACACAACCG+AGG | - | chr1_1:8212683-8212702 | Msa0005560:intron | 45.0% | |
| AACGAAGATGACACAACCGA+GGG | - | chr1_1:8212684-8212703 | Msa0005560:intron | 45.0% | |
| CCAAAGTTCGTGGTTGGAAT+TGG | + | chr1_1:8212716-8212735 | None:intergenic | 45.0% | |
| CCAATTCCAACCACGAACTT+TGG | - | chr1_1:8212713-8212732 | Msa0005560:intron | 45.0% | |
| !! | GGCTCGCTTTTCACTTCTAA+TGG | - | chr1_1:8212735-8212754 | Msa0005560:intron | 45.0% |
| ! | TCACTTCTAATGGATCCACC+AGG | - | chr1_1:8212745-8212764 | Msa0005560:intron | 45.0% |
| TCACAGCCTAGAAACTAAGC+AGG | - | chr1_1:8212926-8212945 | Msa0005560:intron | 45.0% | |
| ! | TGACCCTGACATGTTTGTTG+TGG | + | chr1_1:8213086-8213105 | None:intergenic | 45.0% |
| CAACAAACATGTCAGGGTCA+AGG | - | chr1_1:8213086-8213105 | Msa0005560:intron | 45.0% | |
| GAAGCAGCTAGGATATAGCA+TGG | - | chr1_1:8213229-8213248 | Msa0005560:intron | 45.0% | |
| ! | GGATGTCGTGAATAATGGAG+TGG | - | chr1_1:8213250-8213269 | Msa0005560:CDS | 45.0% |
| !! | ATGTGGATGCGCTTTTTAGG+GGG | + | chr1_1:8213563-8213582 | None:intergenic | 45.0% |
| AAAGCGCATCCACATTGTTG+CGG | - | chr1_1:8213568-8213587 | Msa0005560:CDS | 45.0% | |
| AATTGCTCACCGCAACAATG+TGG | + | chr1_1:8213580-8213599 | None:intergenic | 45.0% | |
| GCTGAAGAATGTTTCGCCAA+CGG | - | chr1_1:8213835-8213854 | Msa0005560:CDS | 45.0% | |
| AGAATGTTTCGCCAACGGTA+TGG | - | chr1_1:8213840-8213859 | Msa0005560:CDS | 45.0% | |
| TACATGGCAAGATCTACCGG+CGG | - | chr1_1:8209168-8209187 | Msa0005560:CDS | 50.0% | |
| !! | TCACTTTTCCTTATCGCCGC+CGG | + | chr1_1:8209187-8209206 | None:intergenic | 50.0% |
| ATCTGTGACAGTTCCTCCAC+AGG | + | chr1_1:8209382-8209401 | None:intergenic | 50.0% | |
| AATGAAGCACGGACACTCCT+CGG | - | chr1_1:8209522-8209541 | Msa0005560:CDS | 50.0% | |
| !! | GCAGACTCGGTGTTGTAAAG+TGG | - | chr1_1:8209850-8209869 | Msa0005560:CDS | 50.0% |
| GACTGCAGAGTAGCTACTTG+GGG | + | chr1_1:8209910-8209929 | None:intergenic | 50.0% | |
| CGACTGCAGAGTAGCTACTT+GGG | + | chr1_1:8209911-8209930 | None:intergenic | 50.0% | |
| CCAAGTAGCTACTCTGCAGT+CGG | - | chr1_1:8209909-8209928 | Msa0005560:CDS | 50.0% | |
| GTCGGAGACGTAAGGACTAT+TGG | - | chr1_1:8209927-8209946 | Msa0005560:CDS | 50.0% | |
| ! | GTCGAAATTTTCACCGGAGC+AGG | - | chr1_1:8210262-8210281 | Msa0005560:intron | 50.0% |
| AGATTCCTTCACACCTGCTC+CGG | + | chr1_1:8210278-8210297 | None:intergenic | 50.0% | |
| !! | GAAAGGAGTGCCTGCAAAGA+AGG | - | chr1_1:8210324-8210343 | Msa0005560:intron | 50.0% |
| GAACCTGTGTTTAGCAAGGC+AGG | - | chr1_1:8210400-8210419 | Msa0005560:CDS | 50.0% | |
| TCACCTGCCTTGCTAAACAC+AGG | + | chr1_1:8210406-8210425 | None:intergenic | 50.0% | |
| TCAGGCCAAGAGAGGTAGTA+AGG | - | chr1_1:8211361-8211380 | Msa0005560:intron | 50.0% | |
| CGATACTTAGAGGGGGTAGA+AGG | + | chr1_1:8211676-8211695 | None:intergenic | 50.0% | |
| CGTTGTGATGTGTACGACAC+TGG | - | chr1_1:8212054-8212073 | Msa0005560:intron | 50.0% | |
| GACACTGGAATTGGCATACC+AGG | - | chr1_1:8212069-8212088 | Msa0005560:CDS | 50.0% | |
| ! | GCTCGAAAATATGGAGGCAC+AGG | - | chr1_1:8212275-8212294 | Msa0005560:CDS | 50.0% |
| AAAAGCGAGCCCAAAGTTCG+TGG | + | chr1_1:8212726-8212745 | None:intergenic | 50.0% | |
| TGAGATTCTATGAGGCCTGG+TGG | + | chr1_1:8212763-8212782 | None:intergenic | 50.0% | |
| GTGTGAGATTCTATGAGGCC+TGG | + | chr1_1:8212766-8212785 | None:intergenic | 50.0% | |
| AACATGTCAGGGTCAAGGGA+AGG | - | chr1_1:8213091-8213110 | Msa0005560:intron | 50.0% | |
| AGTCTCCGCAATTGTGTGCA+AGG | - | chr1_1:8213662-8213681 | Msa0005560:CDS | 50.0% | |
| CACAAATGCGTCCATACCGT+TGG | + | chr1_1:8213854-8213873 | None:intergenic | 50.0% | |
| GGAGTATAAGCAGGCGAACG+CGG | - | chr1_1:8208988-8209007 | Msa0005560:intron | 55.0% | |
| ATAAGCAGGCGAACGCGGTT+CGG | - | chr1_1:8208993-8209012 | Msa0005560:intron | 55.0% | |
| AAGATCTACCGGCGGCGATA+AGG | - | chr1_1:8209176-8209195 | Msa0005560:CDS | 55.0% | |
| TGTCGGACACGACATGTGTC+CGG | + | chr1_1:8209566-8209585 | None:intergenic | 55.0% | |
| ACGTATACGGACACGGACAC+CGG | + | chr1_1:8209657-8209676 | None:intergenic | 55.0% | |
| CCGACTGCAGAGTAGCTACT+TGG | + | chr1_1:8209912-8209931 | None:intergenic | 55.0% | |
| ACTCTGCAGTCGGAGACGTA+AGG | - | chr1_1:8209919-8209938 | Msa0005560:CDS | 55.0% | |
| TTTCACCGGAGCAGGTGTGA+AGG | - | chr1_1:8210270-8210289 | Msa0005560:intron | 55.0% | |
| !! | ATGGCTCTGAACTGCGCGTA+TGG | + | chr1_1:8213279-8213298 | None:intergenic | 55.0% |
| TGGGATGCTGCAAGAGAAGC+TGG | - | chr1_1:8213497-8213516 | Msa0005560:CDS | 55.0% | |
| GGAGGCGAGTATTCGGAGAG+AGG | - | chr1_1:8209300-8209319 | Msa0005560:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | chr1_1:8209528-8209547 | Msa0005560:CDS | 60.0% | |
| ACTGGGACACGCCTAATCCG+AGG | + | chr1_1:8209542-8209561 | None:intergenic | 60.0% | |
| GATTAGGCGTGTCCCAGTGC+CGG | - | chr1_1:8209544-8209563 | Msa0005560:CDS | 60.0% | |
| CACGACATGTGTCCGGCACT+GGG | + | chr1_1:8209559-8209578 | None:intergenic | 60.0% | |
| ACACGACATGTGTCCGGCAC+TGG | + | chr1_1:8209560-8209579 | None:intergenic | 60.0% | |
| GCGAGCCCAAAGTTCGTGGT+TGG | + | chr1_1:8212722-8212741 | None:intergenic | 60.0% | |
| !! | GGTGTCGGCGTGTCAGTGTC+CGG | - | chr1_1:8209635-8209654 | Msa0005560:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 8208734 | 8213975 | 8208734 | ID=Msa0005560;Name=Msa0005560 |
| chr1_1 | mRNA | 8208734 | 8213975 | 8208734 | ID=Msa0005560-mRNA-1;Parent=Msa0005560;Name=Msa0005560-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.18|0.16|1|1|1|12|45|1011 |
| chr1_1 | exon | 8208734 | 8208901 | 8208734 | ID=Msa0005560-mRNA-1:exon:2926;Parent=Msa0005560-mRNA-1 |
| chr1_1 | exon | 8209120 | 8209284 | 8209120 | ID=Msa0005560-mRNA-1:exon:2925;Parent=Msa0005560-mRNA-1 |
| chr1_1 | exon | 8209390 | 8210163 | 8209390 | ID=Msa0005560-mRNA-1:exon:2924;Parent=Msa0005560-mRNA-1 |
| chr1_1 | exon | 8210384 | 8210487 | 8210384 | ID=Msa0005560-mRNA-1:exon:2923;Parent=Msa0005560-mRNA-1 |
| chr1_1 | exon | 8210619 | 8210986 | 8210619 | ID=Msa0005560-mRNA-1:exon:2922;Parent=Msa0005560-mRNA-1 |
| chr1_1 | exon | 8211111 | 8211160 | 8211111 | ID=Msa0005560-mRNA-1:exon:2921;Parent=Msa0005560-mRNA-1 |
| chr1_1 | exon | 8211245 | 8211375 | 8211245 | ID=Msa0005560-mRNA-1:exon:2920;Parent=Msa0005560-mRNA-1 |
| chr1_1 | exon | 8211746 | 8211952 | 8211746 | ID=Msa0005560-mRNA-1:exon:2919;Parent=Msa0005560-mRNA-1 |
| chr1_1 | exon | 8212057 | 8212150 | 8212057 | ID=Msa0005560-mRNA-1:exon:2918;Parent=Msa0005560-mRNA-1 |
| chr1_1 | exon | 8212241 | 8212468 | 8212241 | ID=Msa0005560-mRNA-1:exon:2917;Parent=Msa0005560-mRNA-1 |
| chr1_1 | exon | 8212607 | 8212663 | 8212607 | ID=Msa0005560-mRNA-1:exon:2916;Parent=Msa0005560-mRNA-1 |
| chr1_1 | exon | 8213241 | 8213975 | 8213241 | ID=Msa0005560-mRNA-1:exon:2915;Parent=Msa0005560-mRNA-1 |
| chr1_1 | CDS | 8213241 | 8213975 | 8213241 | ID=Msa0005560-mRNA-1:cds;Parent=Msa0005560-mRNA-1 |
| chr1_1 | CDS | 8212607 | 8212663 | 8212607 | ID=Msa0005560-mRNA-1:cds;Parent=Msa0005560-mRNA-1 |
| chr1_1 | CDS | 8212241 | 8212468 | 8212241 | ID=Msa0005560-mRNA-1:cds;Parent=Msa0005560-mRNA-1 |
| chr1_1 | CDS | 8212057 | 8212150 | 8212057 | ID=Msa0005560-mRNA-1:cds;Parent=Msa0005560-mRNA-1 |
| chr1_1 | CDS | 8211746 | 8211952 | 8211746 | ID=Msa0005560-mRNA-1:cds;Parent=Msa0005560-mRNA-1 |
| chr1_1 | CDS | 8211245 | 8211375 | 8211245 | ID=Msa0005560-mRNA-1:cds;Parent=Msa0005560-mRNA-1 |
| chr1_1 | CDS | 8211111 | 8211160 | 8211111 | ID=Msa0005560-mRNA-1:cds;Parent=Msa0005560-mRNA-1 |
| chr1_1 | CDS | 8210619 | 8210986 | 8210619 | ID=Msa0005560-mRNA-1:cds;Parent=Msa0005560-mRNA-1 |
| chr1_1 | CDS | 8210384 | 8210487 | 8210384 | ID=Msa0005560-mRNA-1:cds;Parent=Msa0005560-mRNA-1 |
| chr1_1 | CDS | 8209390 | 8210163 | 8209390 | ID=Msa0005560-mRNA-1:cds;Parent=Msa0005560-mRNA-1 |
| chr1_1 | CDS | 8209120 | 8209284 | 8209120 | ID=Msa0005560-mRNA-1:cds;Parent=Msa0005560-mRNA-1 |
| chr1_1 | CDS | 8208779 | 8208901 | 8208779 | ID=Msa0005560-mRNA-1:cds;Parent=Msa0005560-mRNA-1 |
| chr1_1 | three_prime_UTR | 8208734 | 8208778 | 8208734 | ID=Msa0005560-mRNA-1:three_prime_utr;Parent=Msa0005560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
